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As filed with the Securities and Exchange Commission on June 9, 2004

Registration No. 333-113998



UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549


Amendment No. 4
to
FORM S-1
REGISTRATION STATEMENT
UNDER
THE SECURITIES ACT OF 1933


SENOMYX, INC.
(Exact name of registrant as specified in its charter)

Delaware
(State or other jurisdiction of
incorporation or organization)
  8731
(Primary Standard Industrial
Classification Code Number)
  33-0843840
(I.R.S. Employer
Identification Number)

11099 North Torrey Pines Road
La Jolla, CA 92037
(858) 646-8300
(Address, including zip code, and telephone number, including
area code, of registrant's principal executive offices)


Kent Snyder
President and Chief Executive Officer
Senomyx, Inc.
11099 North Torrey Pines Road
La Jolla, CA 92037
(858) 646-8300
(Name, address, including zip code, and telephone number, including area code, of agent for service)




Copies to:
Thomas A. Coll, Esq.   David C. Lopez, Esq.
Steven M. Przesmicki, Esq.   Cleary, Gottlieb, Steen & Hamilton
Cooley Godward LLP   One Liberty Plaza
4401 Eastgate Mall   New York, NY 10006
San Diego, CA 92121   (212) 225-2000
(858) 550-6000    

Approximate date of commencement of proposed sale to the public:
As soon as practicable after the effective date of this Registration Statement.


        If any of the securities being registered on this form are to be offered on a delayed or continuous basis pursuant to Rule 415 under the Securities Act, check the following box.     o

        If this form is filed to register additional securities for an offering pursuant to Rule 462(b) under the Securities Act, check the following box and list the Securities Act registration statement number of the earlier effective registration statement for the same offering.     o

        If this form is a post-effective amendment filed pursuant to Rule 462(c) under the Securities Act, check the following box and list the Securities Act registration statement number of the earlier effective registration statement for the same offering.     o

        If this form is a post-effective amendment filed pursuant to Rule 462(d) under the Securities Act, check the following box and list the Securities Act registration number of the earlier effective registration statement for the same offering.     o

        If delivery of the prospectus is expected to be made pursuant to Rule 434, check the following box.     o


CALCULATION OF REGISTRATION FEE


Title of each class of securities
to be registered

  Number of shares registered(1)

  Proposed maximum aggregate
offering price(2)

  Amount of
registration fee(3)


Common Stock, $0.001 par value per share   6,900,000   $103,500,000   $13,113.45

(1)
Includes 900,000 shares subject to the underwriters' over-allotment option.

(2)
Estimated solely for the purpose of calculating the amount of the registration fee in accordance with Rule 457(o) under the Securities Act of 1933, as amended.

(3)
Previously paid.


         The Registrant hereby amends this Registration Statement on such date or dates as may be necessary to delay its effective date until the Registrant shall file a further amendment that specifically states that this Registration Statement shall thereafter become effective in accordance with Section 8(a) of the Securities Act of 1933, as amended, or until the Registration Statement shall become effective on such date as the Commission, acting pursuant to said Section 8(a), may determine.




The information in this prospectus is not complete and may be changed. We may not sell these securities until the registration statement filed with the Securities and Exchange Commission is effective. This prospectus is not an offer to sell these securities and it is not soliciting an offer to buy these securities in any state where the offer or sale is not permitted.

SUBJECT TO COMPLETION, DATED JUNE 9, 2004

P R O S P E C T U S

LOGO

6,000,000 Shares
Common Stock
$                  per share


        We are selling 6,000,000 shares of our common stock. We have granted the underwriters an option to purchase up to 900,000 additional shares of common stock to cover over-allotments.

        This is the initial public offering of our common stock. We currently expect the initial public offering price to be between $13 and $15 per share. Our common stock has been approved for quotation on the Nasdaq National Market under the symbol "SNMX," subject to official notice of issuance.


         Investing in our common stock involves risks. See "Risk Factors" beginning on page 8.

        Neither the Securities and Exchange Commission nor any state securities commission has approved or disapproved of these securities or determined if this prospectus is truthful or complete. Any representation to the contrary is a criminal offense.


 
  Per Share
  Total
Public Offering Price   $     $  
Underwriting Discounts   $     $  
Proceeds to Senomyx, Inc. (before expenses)   $     $  

        The underwriters expect to deliver the shares to purchasers on or about                        , 2004.

Sole Book-Runner    
Citigroup   Deutsche Bank Securities

Needham & Company, Inc.

 

First Albany Capital

                        , 2004


        You should rely only on the information contained in or incorporated by reference in this prospectus. We have not authorized anyone to provide you with different information. We are not making an offer of these securities in any state where the offer is not permitted. You should not assume that the information contained in this prospectus is accurate as of any date other than the date on the front of this prospectus.



TABLE OF CONTENTS

 
  Page
Summary   1
Risk Factors   8
Forward-Looking Statements   23
Notice to Investors   23
Use of Proceeds   24
Dividend Policy   25
Capitalization   26
Dilution   27
Selected Financial Data   29
Management's Discussion and Analysis of Financial Condition and Results of Operations   31
Business   42
Management   59
Certain Transactions   74
Principal Stockholders   77
Description of Capital Stock   80
Material United States Federal Income Tax Consequences to Non-United States Holders   84
Shares Eligible for Future Sale   87
Underwriting   89
Legal Matters   92
Experts   92
Where You Can Find Additional Information   92
Index to Financial Statements   F-1

        Until                        , 2004 (25 days after the date of this prospectus), all dealers that buy, sell or trade our common stock, whether or not participating in this offering, may be required to deliver a prospectus. This is in addition to the dealers' obligation to deliver a prospectus when acting as underwriters and with respect to their unsold allotments or subscriptions.

i




SUMMARY

         After you read the following summary, you should read and consider carefully the more detailed information and financial statements and related notes that we include in and incorporate by reference into this prospectus. If you invest in our common stock, you are assuming a high degree of risk. See "Risk Factors."


Our Company

        We are a biotechnology company using proprietary taste receptor-based assays and screening technologies to discover and develop novel flavors and flavor enhancers for the packaged food and beverage industry. We believe our flavor ingredients will enable packaged food and beverage companies to improve the nutritional profile of their products and generate cost of goods savings, while maintaining or enhancing taste. We license our flavor ingredients to our collaborators on an exclusive basis, which we believe will provide these companies with the ability to differentiate their products. Our current programs focus on the development of savory, sweet and salt flavors or flavor enhancers.

        We have entered into product discovery and development collaborations with four of the world's leading packaged food and beverage companies: Campbell Soup Company, The Coca-Cola Company, Kraft Foods Global, Inc. and Nestlé SA. We currently anticipate that we will derive all of our revenues from existing and future collaborations. Our existing collaboration agreements provide for research and development funding, milestone payments based upon our achievement of research or development goals and, in the event of commercialization, royalties on future sales of consumer products incorporating our flavors and flavor enhancers. In addition, future collaboration agreements may provide for up-front license fees.

        Each of our collaboration agreements provides that we will pursue discovery and development of flavors and flavor enhancers for use by our collaborators within defined exclusive packaged food and beverage product fields. Under each of our existing collaboration agreements, we are primarily responsible for the discovery, development and regulatory approval phases and any associated expenses. Under each agreement, our collaborator will be responsible for determining whether to incorporate our flavor or flavor enhancer into a particular consumer product or products and manufacturing, marketing, selling and distributing the consumer product or products, and any associated expenses. We believe our collaborations will allow us to benefit from our collaborators' well-established brand recognition, global market presence, established sales and distribution channels and other industry specific expertise.

        Packaged food and beverage products include carbonated and non-carbonated beverages, frozen foods, snack foods, ice cream, pasta, canned soup and numerous other products. According to Euromonitor International, an independent research organization, worldwide sales of packaged food and beverage products in 2003 are estimated at approximately $1.2 trillion, of which $227 billion was generated in the United States. Based on these estimates, of the worldwide total in 2003, sales of packaged foods are estimated at approximately $906 billion and sales of non-alcoholic beverages are estimated at approximately $278 billion. Based on data from Euromonitor, Information Resources, Inc. and our collaborators' 2003 annual reports, we estimate that our collaborators' combined worldwide sales in 2003 of their products that fall within their exclusive product fields were $31 billion. Our collaboration agreements provide that we will receive a royalty of 1% to 4% on our collaborators' sales of products containing our flavors or flavor enhancers. However, our collaborators may not incorporate our flavors and flavor enhancers into all of their products within their exclusive product fields.


Our Product Candidates

        We discover and develop flavors and flavor enhancers for the packaged food and beverage industry. Flavors are substances that impart tastes or aromas in foods and beverages. Individuals experience the sensation of taste when flavors in food and beverage products interact with taste

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receptors in the mouth. A taste receptor functions either by physically binding to a flavor ingredient in a process analogous to the way a key fits into a lock or by acting as a channel to allow ions to flow directly into a taste cell. As a result of these interactions, signals are sent to the brain where a specific taste sensation is registered.

        There are currently five recognized primary senses of taste: umami, which is the savory taste of glutamate, sweet, salt, bitter and sour. We are currently pursuing the discovery and development of flavors and flavor enhancers through the following programs:


Our Discovery and Development Approach

        We believe our approach to the discovery and development of novel flavors and flavor enhancers for packaged food and beverage companies offers significant advantages over traditional approaches. We use our proprietary taste receptor-based assays and high-throughput screening technologies, which are test systems incorporating human taste receptors, to screen more compounds in less time than traditional approaches. These assays and high-throughput screening technologies were developed by us in part using technologies licensed from Aurora Biosciences. The following diagram summarizes our discovery and development approach, the estimated timing of each phase of our approach and the status of our current collaboration programs:

LOGO

        The key phases of our discovery and development approach are:

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        We believe our approach will result in the discovery and development of flavors and flavor enhancers that will provide valuable solutions to the following key challenges faced by the packaged food and beverages industry:


Our Strategy

        Our goal is to become the leader in discovering, developing and commercializing new and improved flavors and flavor enhancers. Key elements of our strategy include:

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Risks Affecting Us

        We are subject to a number of risks of which you should be aware before you decide to buy our common stock. These risks are discussed more fully in "Risk Factors." We have not received regulatory approval for, or generated commercial revenues from, any of our flavors or flavor enhancers. We are dependent upon our existing and future product discovery and development collaborators for all of our revenue, and our collaborators may not incorporate our flavors and flavor enhancers into products that will be commercially successful. If we and our collaborators do not successfully commercialize any of our flavors or flavor enhancers, we will be unable to achieve our business objectives. As of March 31, 2004, we had an accumulated deficit of $69.6 million. We expect to incur additional losses for at least the next three years, and we may never become profitable.


Corporate Information

        We were incorporated in 1998 in Delaware. Our principal executive offices are located at 11099 North Torrey Pines Road, La Jolla, California 92037, and our telephone number is (858) 646-8300. Our website address is http://www.senomyx.com. The information contained in, or that can be accessed through, our website is not part of this prospectus. Unless the context indicates otherwise, as used in this prospectus, the terms "Senomyx," "we," "us" and "our" refer to Senomyx, Inc., a Delaware corporation. We use Senomyx® and the Senomyx logo as trademarks in the United States and other countries. All other trademarks and tradenames mentioned in this prospectus are the property of their respective owners.

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The Offering

Common stock offered   6,000,000 Shares

Common stock to be outstanding after this offering

 

24,677,801 Shares

Use of proceeds

 

Research and development and general corporate purposes. See "Use of Proceeds."

Proposed Nasdaq National Market symbol

 

SNMX

        The number of shares of common stock to be outstanding immediately after this offering as shown above is based on the number of shares outstanding as of March 31, 2004. This number excludes, as of March 31, 2004:

        Except as otherwise indicated, all information in this prospectus assumes:

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Summary Financial Data

        The following table summarizes our financial data. The statements of operations data for the years ended December 31, 2001, 2002 and 2003 are derived from our audited financial statements included elsewhere in this prospectus. The statements of operations data for the years ended December 31, 1999 and 2000 have been derived from our audited financial statements not included in this prospectus. The balance sheet data as of March 31, 2004 and for the three months ended March 31, 2003 and 2004 are derived from our unaudited financial statements, which are included elsewhere in this prospectus. You should read this data together with our financial statements and related notes included elsewhere in this prospectus and the information under "Selected Financial Data" and "Management's Discussion and Analysis of Financial Condition and Results of Operations." The as adjusted balance sheet data reflects the balance sheet data at March 31, 2004 adjusted for the sale by us of 6,000,000 shares of common stock at an assumed initial offering price of $14.00 per share in this offering, after deducting the estimated underwriting discounts and commissions and estimated offering expenses payable by us, and the conversion of all of our outstanding shares of preferred stock into 15,214,719 shares of common stock upon the closing of this offering.

 
  Years ended December 31,
  Three months ended March 31,
 
 
  1999
  2000
  2001
  2002
  2003
  2003
  2004
 
 
   
   
   
   
   
  (Unaudited)

  (Unaudited)

 
 
  (In thousands, except share and per share data)

 
Statements of Operations Data:                                            
Revenue under collaborative agreements   $   $ 115   $ 2,275   $ 7,327   $ 9,537   $ 2,203   $ 2,241  
Operating expenses:                                            
  Research and development     155     6,137     16,263     17,635     16,802     4,002     3,950  
  General and administrative     1,172     3,196     4,952     4,154     4,096     1,275     1,010  
  Stock-based compensation:                                            
    Research and development     84     1,854     1,240     540     1,293     248     593  
    General and administrative     12     372     378     158     4,997     30     1,687  
   
 
 
 
 
 
 
 
      Total operating expenses     1,423     11,559     22,833     22,487     27,188     5,555     7,240  
   
 
 
 
 
 
 
 
Loss from operations     (1,423 )   (11,444 )   (20,558 )   (15,160 )   (17,651 )   (3,352 )   (4,999 )
Interest income (expense), net     (10 )   699     329     339     198     56     40  
   
 
 
 
 
 
 
 
Net loss   $ (1,433 ) $ (10,745 ) $ (20,229 ) $ (14,821 ) $ (17,453 ) $ (3,296 ) $ (4,959 )
   
 
 
 
 
 
 
 

Basic and diluted net loss per share(1):

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 
  Historical   $ (2.14 ) $ (8.79 ) $ (12.35 ) $ (6.85 ) $ (7.16 ) $ (1.41 ) $ (1.88 )
   
 
 
 
 
 
 
 
  Pro Forma                           $ (0.99 )       $ (0.28 )
                           
       
 
Shares used to compute basic and diluted net loss per share(1):                                            
  Historical     668,601     1,223,061     1,637,488     2,162,900     2,436,174     2,342,237     2,643,873  
   
 
 
 
 
 
 
 
  Pro Forma                             17,650,893           17,858,592  
                           
       
 

(1)
Please see Note 1 to our financial statements for an explanation of the method used to calculate the historical and pro forma net loss per share and the number of shares used in the computation of the per share amounts.

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  As of March 31, 2004
 
 
  Actual
  As Adjusted
 
 
  (Unaudited)
(in thousands)

 
Balance Sheet Data:              
  Cash, cash equivalents and investments available-for-sale   $ 15,110   $ 91,810  
  Working capital     12,532     89,232  
  Total assets     18,666     95,366  
  Long-term obligations          
  Accumulated deficit     (69,641 )   (69,641 )
  Total stockholders' equity     14,784     91,484  

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RISK FACTORS

         Investing in our common stock involves a high degree of risk. You should carefully consider the following risk factors and all other information contained in this prospectus before purchasing our common stock. Additional risks and uncertainties that we are unaware of may also become important factors that affect us. If any of the following risks occur, our business, financial condition or results of operations could be materially and adversely affected. In these circumstances, the market price of our common stock could decline, and you may lose some or all of your investment.

Risks Related To Our Business

        A key element of our strategy is to commercialize our flavors and flavor enhancers through product discovery and development collaborations. To date, all of our revenue has been derived solely from research and development payments and milestone payments received under collaboration agreements with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé. Substantially all of our revenue in the foreseeable future will result from these types of payments from these collaborations, unless we successfully commercialize a product candidate through these or other collaborators and earn royalties on future sales of consumer products incorporating our flavors or flavor enhancers.

        Our agreement with Campbell Soup provides for research and development funding until March 2006 and gives Campbell Soup the right to terminate the agreement earlier without cause on or after March 28, 2005, provided that it pay a specified termination fee if it terminates the agreement after March 28, 2005 but prior to March 28, 2006. Our agreements with Coca-Cola, Kraft Foods and Nestlé provide for research and development funding until April 2008, May 2005 and April 2005, respectively, and give each party the right to conclude the respective collaborative program earlier for any reason upon payment to us of a termination fee, provided that Coca-Cola may terminate the collaborative period without payment of an early conclusion fee in the event that we fail to achieve a specified research and development goal by April 22, 2006, subject to payment of research funding through July 22, 2006. If any or all of our agreements with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé expire or are terminated, our revenue would significantly decline and if all of our agreements expire or are terminated, our revenue would be substantially eliminated, which would have a material adverse effect on our business, financial condition and results of operations. Our collaborators may not renew their agreements with us or, if they do, they may not be on terms that are as favorable to us as our current agreements.

        We do not currently have a commercialized product and cannot assure you we will have a commercialized product in the foreseeable future, or at all. We will be dependent on our current and any other possible future collaborators to commercialize any flavors or flavor enhancers that we successfully develop and to provide the sales, marketing and distribution capabilities required for the success of our business. We have limited or no control over the amount and timing of resources that our current or any future collaborators may devote to our programs or potential products. Our collaborators may decide not to devote the necessary resources to the commercialization of our flavors or flavor enhancers, or may pursue a competitor's product if our flavors or flavor enhancers do not have the characteristics desired by the collaborator. These characteristics include, among other things, enhancement properties, temperature stability, solubility, taste and cost. If these collaborators fail to conduct their commercialization, sales and marketing or distribution activities successfully and in a timely manner, we will earn little or no royalty revenues from our flavors and flavor enhancers and we will not be able to achieve our objectives or build a sustainable or profitable business.

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        Our present and any future product discovery and development collaboration opportunities could be harmed if:

        We may not be able to enter into additional product discovery and development collaborations due to the exclusive nature of our current product discovery and development collaborations. Each of our current collaboration agreements provides that we will conduct research and development on flavors and flavor enhancers for use within one or more defined packaged food and beverage product fields on an exclusive basis for the respective collaborator during the collaborative period specified in the agreement. Because each of these agreements is exclusive, we will not be able to enter into a collaboration agreement with any other food and beverage company covering the same product field during the applicable collaborative period. In addition, our collaborators' competitors may not wish to do business with us at all due to our relationship with our collaborators. If we are unable to enter into additional product discovery and development collaborations, our ability to sustain or expand our business will be significantly diminished.

        We may not succeed in developing flavors or flavor enhancers with the appropriate attributes required for use in successful commercial products. Successful flavors and flavor enhancers require, among other things, appropriate biological activity, including the correct flavor or flavor enhancer property for the product application, an acceptable safety profile, including lack of toxicity or allergenicity, and appropriate physical or chemical properties, including relative levels of stability, volatility and resistance to heat. Successful flavors and flavor enhancers must also be cost-efficient for our collaborators. We may not be able to develop flavors or flavor enhancers that meet these criteria.

        We do not have a GRAS determination or regulatory approval for any product candidates at this time. In the United States, the development, sale and incorporation of our flavors or flavor enhancers into products are subject to regulation by the Food and Drug Administration, or FDA, and in some instances other government bodies. Obtaining and maintaining a GRAS determination or regulatory approval is typically costly and can take many years.

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        Depending on the amount or intended use of a particular flavor or flavor enhancer added to a product and the number of product categories in which the flavor or flavor enhancer will be incorporated, specific safety assessment protocols and regulatory processes must be satisfied before we or our collaborators can commercially market and sell products containing any flavors or flavor enhancers that we may discover. A key element of our strategy is to develop flavors and flavor enhancers that will be subject to review under the FEMA GRAS process, which we expect will take 12 to 18 months and is less expensive than the alternative of filing a food additive petition with the FDA, which can take eight years or more. The FEMA GRAS review process may take longer than 18 months and cost more than $1 million if additional safety studies are requested by the FEMA expert panel or are necessary to explain unexpected safety study findings. There is a risk that one or more of our product candidates may not qualify for a FEMA GRAS determination. This may occur for a variety of reasons, including the flavor or flavor enhancer's intended use, the amount of the flavor or flavor enhancer intended to be added to packaged foods and beverages, the number of product categories in which the flavor or flavor enhancer will be incorporated, whether the flavor or flavor enhancer imparts sweetness, the safety profile of the flavor or flavor enhancer and the FEMA expert panel's interpretation of the safety data. Even if we obtain a GRAS determination with respect to a flavor or flavor enhancer, the FDA has the ability to challenge such determination, which could materially adversely affect our ability to market products on schedule or at all. In the event that a particular flavor or flavor enhancer does not qualify for FEMA GRAS determination, we will be required to pursue a lengthly FDA approval process or dedicate our development efforts to alternative compounds, which would further delay commercialization. In addition, laws, regulations or FDA practice governing the regulatory approval process, the availability of the GRAS determination process or the manufacture or labeling of such products, may change in a manner that could adversely affect our ability to commercialize products on schedule or at all.

        Sales of our flavors or flavor enhancers outside of the United States will be subject to foreign regulatory requirements. In most cases, whether or not a GRAS determination or FDA approval has been obtained, approval of a product by the comparable regulatory authorities of foreign countries must still be obtained prior to manufacturing or marketing the product in those countries. A GRAS determination or FDA approval in the United States or in any other jurisdiction does not ensure approval in other jurisdictions because the requirements from jurisdiction to jurisdiction may vary widely. Obtaining foreign approvals could result in significant delays, difficulties and costs for us and require additional safety studies and additional expenses. If we fail to comply with these regulatory requirements or to obtain and maintain required approvals, our ability to generate revenue will be diminished.

        We and our collaborators may not be successful in overcoming these regulatory hurdles, which could result in product launch delays, unanticipated expenses, termination of collaborations, and flavors and flavor enhancers not being approved for incorporation into consumer products. These consequences would have a material adverse effect on our business financial condition and results of operations.

        Even if we discover and develop flavors and flavor enhancers that obtain the necessary GRAS determination or regulatory approval, our success depends to a significant degree upon the commercial success of packaged food and beverage products incorporating those flavors or flavor enhancers. If these products fail to achieve or subsequently maintain market acceptance or commercial viability, our business would be significantly harmed because our royalty revenue is dependent upon consumer sales of these products. In addition we could be unable to maintain our existing collaborations or attract new product discovery and development collaborators. Many factors may affect the market acceptance and

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commercial success of any potential products incorporating flavors or flavor enhancers that we may discover, including:

        We have not been profitable and have generated substantial operating losses since we were incorporated in September 1998. We incurred net losses of approximately $14.8 million for the year ended December 31, 2002, and approximately $17.5 million for the year ended December 31, 2003. As of March 31, 2004, we had an accumulated deficit of approximately $69.6 million. We expect to incur additional losses for at least the next three years. The extent of our future losses will depend, in part, on the rate of increase in our operating expenses and the rate of growth, if any, in our revenue from our four existing and any future product discovery and development collaborations as well as from other sources that may become available to us in the future and on the level of our expenses. To date, our revenue has come solely from research and development funding and milestone payments under our product discovery and development collaboration agreements with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé. In order for us to generate royalty revenue and become profitable, we must retain our existing product discovery and development collaborations and our collaborators must commercialize products incorporating one or more of our flavors or flavor enhancers, from which we can derive royalty revenues. Our ability to generate royalty revenue is uncertain and will depend upon our ability to meet particular research, development and commercialization objectives.

        Our operating results have fluctuated in the past and are likely to vary significantly in the future based upon a number of factors, many of which we have little or no control over. We operate in a highly dynamic industry and future results could be subject to significant fluctuations. These fluctuations could cause us to fail to meet or exceed financial expectations of securities analysts or investors, which could cause our stock price to decline rapidly and significantly. Revenue and expenses in future periods may be greater or less than revenue and expenses in the immediately preceding period or in the comparable period of the prior year. Therefore, period-to-period comparisons of our operating results are not necessarily a good indication of our future performance. Some of the factors that could cause our operating results to fluctuate include:

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        If we are unable to successfully commercialize our flavors and flavor enhancers, we may need to obtain additional capital or change our strategy to continue our operations. In addition, our business and operations may change in a manner that would consume available resources at a greater rate than anticipated. In such event, we may need to raise substantial additional capital to, among other things:

        If we require additional capital to continue our operations, we cannot ensure you that additional financing will be available on terms acceptable to us, or at all. If adequate funds are not available or are not available on acceptable terms, our ability to fund our operations, take advantage of opportunities, identify and develop flavors and flavor enhancers, develop technologies or otherwise respond to competitive pressures could be significantly limited. In addition, if financing is not available, we may need to alter our strategy or cease operations. In addition, issuances of debt or additional equity could impact your rights as a holder of our common stock, may dilute your ownership percentage and may impose restrictions on our operations. These restrictions could include limitations on additional borrowing, specific restrictions on the use of our assets as well as prohibitions on our ability to create liens, pay dividends, redeem our stock or make investments.

        Our success depends to a significant degree upon the continued contributions of our executive officers, management and scientific staff. If we lose the services of one or more of these people and, in particular, Kent Snyder, our President and Chief Executive Officer, or Mark Zoller, Ph.D., our Chief Scientific Officer and Sr. Vice President, Research, the relationships we have with our collaborators would likely be negatively impacted and we may be delayed or unable to develop new product candidates, commercialize our existing product candidates or achieve our other business objectives, any of which could cause our stock price to decline. We have entered into employment letter agreements with Kent Snyder, Mark Zoller, Ph.D., Harry Leonhardt, Esq., our Vice President, General Counsel and Corporate Secretary, John Poyhonen, our Vice President and Chief Financial and Business Officer, and Klaus Gubernator, Ph.D., our Vice President, Development, the terms of which are included in this prospectus under the heading "Management—Employment Agreements." All of our employees are at-will employees, which means that either we or the employee may terminate their employment at any time. We currently have no key person insurance.

        In addition, our discovery and development programs depend on our ability to attract and retain highly skilled scientists, including molecular biologists, biochemists, chemists and engineers. We may not be able to attract or retain qualified employees in the future due to the intense competition for

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qualified personnel among technology-based businesses, particularly in the San Diego area. We also face competition from universities and public and private research institutions in recruiting and retaining highly qualified scientific and management personnel. If we are not able to attract and retain the necessary personnel to accomplish our business objectives, we may experience constraints that will adversely affect our ability to meet the demands of our current or any future product discovery and development collaborators in a timely fashion or to support our independent discovery and development programs.

        Our strategy includes entering into and working on simultaneous flavor and flavor enhancer discovery and development programs across multiple markets. We increased the number of our full-time employees from seven on December 31, 1999 to 73 on March 31, 2004 and we expect to continue to grow to meet our strategic objectives. If our growth continues, it will continue to place a strain on us, our management and our resources. Our ability to effectively manage our operations, growth and various projects requires us to continue to improve our operational, financial and management controls, reporting systems and procedures and to attract and retain sufficient numbers of talented employees. We may not be able to successfully implement these tasks on a larger scale and, accordingly, we may not achieve our research, development and commercialization goals. If we fail to improve our operational, financial and management information systems, or fail to effectively monitor or manage our new and future employees or our growth, our business would suffer significantly. In addition, no assurance can be made that we will be able to secure adequate facilities to house our staff, conduct our research or achieve our business objectives.

        We do not have experience in manufacturing, nor do we have the resources or facilities to manufacture, flavors and flavor enhancers on a commercial scale. Therefore, the commercialization of our flavors and flavor enhancers will depend in part on our or our collaborators' ability to contract with third-party manufacturers of our flavors and flavor enhancers on a large scale, at a competitive cost, with the specified quality and in accordance with relevant food and beverage regulatory requirements. Any such third-party manufacturers may encounter manufacturing difficulties at any time that could result in delays in the commercialization of potential flavors and flavor enhancers. Our inability to find capable third-party manufacturers or to enter into agreements on acceptable terms with third-party manufacturers could delay commercialization of any products we may develop and may harm our relationships with our existing and any future product discovery and development collaborators and our customers. Moreover, if we are required to change from one third-party manufacturer to another for any reason, the commercialization of our products may be delayed further. In addition, if third-party manufacturers fail to comply with the FDA's good manufacturing practice regulations, then we may be subject to adverse regulatory action including product recalls, warning letters and withdrawal of our products, or our collaborators' or customers' products, from the market.

        Further, because our flavors and flavor enhancers are regulated as food products under the Federal Food, Drug and Cosmetic Act, we and the third parties with which we collaborate or contract to manufacture, process, pack, import or otherwise handle our products or our product ingredients, may be required to comply with certain registration, prior notice submission, recordkeeping and other regulatory requirements. Failure of any party in the chain of distribution to comply with any applicable requirements under the Federal Food, Drug and Cosmetic Act or the FDA's implementing regulations may adversely affect the manufacture and/or distribution of our products in commerce.

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        If appropriate opportunities become available, we may consider acquiring businesses, technologies or products that we believe are a strategic fit with our business. We currently have no commitments or agreements with respect to, and are not actively seeking, any material acquisitions. We have limited experience in identifying acquisition targets, successfully acquiring them and integrating them into our current infrastructure. We may not be able to successfully integrate any businesses, products, technologies or personnel that we might acquire in the future without a significant expenditure of operating, financial and management resources, if at all. In addition, future acquisitions might be funded by issuances of additional debt or equity, which could impact your rights as a holder of our common stock and may dilute your ownership percentage. Any of the foregoing could have a significant adverse effect on our business, financial condition and results of operations.

Risks Related To Our Industry

        Our success depends in part on our ability to obtain and maintain intellectual property that protects our technologies and flavors and flavor enhancers. Patent positions may be highly uncertain and may involve complex legal and factual questions, including the ability to establish patentability of sequences relating to taste receptors, proteins, chemical synthesis techniques, compounds and methods for using them to modulate taste for which we seek patent protection. No consistent standard regarding the allowability or enforceability of claims in many of our pending patent applications has emerged to date. As a result, we cannot predict the breadth of claims that will ultimately be allowed in our patent applications, if any, including those we have in-licensed or the extent to which we may enforce these claims against our competitors. The degree of future protection for our proprietary rights is therefore highly uncertain and we cannot assure you that:

        In addition, patent law outside the United States is uncertain and in many countries intellectual property laws are undergoing review and revision. The laws of some countries do not protect

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intellectual property rights to the same extent as domestic laws. It may be necessary or useful for us to participate in opposition proceedings to determine the validity of our competitors' patents or to defend the validity of any of our or our licensor's future patents, which could result in substantial costs and would divert our efforts and attention from other aspects of our business.

        Technologies licensed to us by others, or in-licensed technologies, are important to our business. In particular, we depend on high-throughput screening technologies that we licensed from Aurora, technology related to certain taste receptor sequences that we license from the University of California and others and technology related to compound libraries that we license from third parties. In addition, we may in the future acquire rights to additional technologies by licensing such rights from existing licensors or from third parties. Such in-licenses may be costly. Also, we generally do not control the patent prosecution, maintenance or enforcement of in-licensed technologies. Accordingly, we are unable to exercise the same degree of control over this intellectual property as we do over our internally developed technologies. Moreover, some of our academic institution licensors, collaborators and scientific advisors have rights to publish data and information to which we have rights. If we cannot maintain the confidentiality of our technologies and other confidential information in connection with our collaborations, our ability to protect our proprietary information or obtain patent protection in the future may be impaired, which could have a significant adverse effect on our business, financial condition and results of operations.

        Many of the patent applications filed by us and our licensors were filed recently with the United States Patent and Trademark Office and most have not been substantively examined and may not result in patents being issued. Some of these patent applications claim sequences that were identified from different publicly available sequence information sources such as the High-Throughput Genomic Sequences division of GenBank. It is difficult to predict whether any of our or our licensors' applications will ultimately be found to be patentable or, if so, to predict the scope of any allowed claims. In addition, the disclosure in our or our licensors' patent applications, particularly in respect of the utility of our claimed inventions, may not be sufficient to meet the statutory requirements for patentability in all cases. As a result, it is difficult to predict whether any of our or our licensors' applications will be allowed, or, if so, to predict the scope of any allowed claims or the enforceability of the patents. Even if enforceable, others may be able to design around any patents or develop similar technologies that are not within the scope of such patents. Our and our licensors' patent applications may not issue as patents that will provide us with any protection or competitive advantage.

        Our commercial success, if any, will be significantly harmed if we infringe the patent rights of third parties or if we breach any license or other agreements that we have entered into with regard to our technology or business.

        We are aware of other companies and academic institutions that have been performing research in the areas of taste modulation and flavors and flavor enhancers. In particular, other companies and academic institutions have announced that they have conducted taste-receptor research and have published data on taste receptor sequence information and taste receptors or filed patent applications or obtained patent protection on taste modulation or taste receptors and their uses, including Linguagen Corp., Mount Sinai School of Medicine, The Scripps Research Institute, the University of California, Monell Chemical Senses Corp., the Warner-Lambert Company and Virginia Commonwealth University. To the extent any of these companies or academic institutions currently have, or obtain in

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the future, broad patent claims, such patents could block our ability to use various aspects of our discovery and development process and might prevent us from developing or commercializing newly discovered flavors and flavor enhancers or otherwise conducting our business. The University of California, for example, claims certain patent rights relating to the coexpression of T1R receptors that may not have been licensed to us. While our technology is focused on the use of human T1R receptors, we cannot assure you that it does not infringe such patent rights. In such event, if we are not able to amend our license with the University of California to include such patent rights and our technology is found to interfere with or infringe such patent rights, our business, financial condition and results of operations could suffer a significant adverse effect. In addition, it is possible that some of the flavors or flavor enhancers that are discovered using our technology may not be patentable or may be covered by intellectual property of third parties.

        We are not currently a party to any litigation, interference, opposition, protest, reexamination, reissue or any other potentially adverse governmental, ex parte or inter-party proceeding with regard to our patent or trademark positions. However, the life sciences and other technology industries are characterized by extensive litigation regarding patents and other intellectual property rights. Many life sciences and other technology companies have employed intellectual property litigation as a way to gain a competitive advantage. If we become involved in litigation, interference proceedings, oppositions, reexamination, protest or other potentially adverse intellectual property proceedings as a result of alleged infringement by us of the rights of others or as a result of priority of invention disputes with third parties, we might have to spend significant amounts of money, time and effort defending our position and we may not be successful. In addition, any claims relating to the infringement of third-party proprietary rights or proprietary determinations, even if not meritorious, could result in costly litigation, lengthy governmental proceedings, divert management's attention and resources, or require us to enter into royalty or license agreements that are not advantageous to us.

        Should any person have filed patent applications or obtained patents that claim inventions also claimed by us, we may have to participate in an interference proceeding declared by the relevant patent regulatory agency to determine priority of invention and, thus, the right to a patent for these inventions in the United States. Such a proceeding could result in substantial cost to us even if the outcome is favorable. Even if successful on priority grounds, an interference action may result in loss of claims based on patentability grounds raised in the interference action. Litigation, interference proceedings or other proceedings could divert management's time and efforts. Even unsuccessful claims could result in significant legal fees and other expenses, diversion of management's time and disruption in our business. Uncertainties resulting from initiation and continuation of any patent proceeding or related litigation could harm our ability to compete and could have a significant adverse effect on our business, financial condition and results of operations.

        An adverse ruling arising out of any intellectual property dispute, including an adverse decision as to the priority of our inventions, could undercut or invalidate our intellectual property position. An adverse ruling could also subject us to significant liability for damages, including possible treble damages, prevent us from using technologies or developing products, or require us to negotiate licenses to disputed rights from third parties. Although patent and intellectual property disputes in the technology area are often settled through licensing or similar arrangements, costs associated with these arrangements may be substantial and could include license fees and ongoing royalties. Furthermore, necessary licenses may not be available to us on satisfactory terms, if at all. Failure to obtain a license in such a case could have a significant adverse effect on our business, financial condition and results of operations.

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        We rely in part on trade secret protection for our confidential and proprietary information, know how and processes. Our policy is to execute proprietary information and invention agreements with our employees and consultants upon the commencement of an employment or consulting relationship. These agreements generally require that all confidential information developed by the individual or made known to the individual by us during the course of the individual's relationship with us be kept confidential and not be disclosed to third parties. These agreements also generally provide that inventions conceived by the individual in the course of their employment shall be our exclusive property. There can be no assurance that we will be able to effectively enforce these agreements or that proprietary information is our exclusive property. There can be no assurance that the subject proprietary information will not be disclosed, that others will not independently develop substantially equivalent proprietary information and techniques or otherwise gain access to our trade secrets or that we can meaningfully protect our trade secrets. Costly and time-consuming litigation could be necessary to enforce and determine the scope of our proprietary rights, and failure to obtain or maintain trade secret protection could adversely affect our competitive business position.

        The life sciences and other technology industries are characterized by rapid technological change, and the area of sensory or taste receptor research is a rapidly evolving field. Our future success will depend on our ability to maintain a competitive position with respect to technological advances. Technological developments by others may result in our flavors or flavor enhancers and technologies becoming obsolete.

        In particular, we face substantial competition from companies pursuing the commercialization of products and services relevant to taste using more traditional methods for the discovery of flavors and flavor enhancers. These competitors include leading flavor companies, such as International Flavors & Fragrances Inc., Givaudan SA, Symrise, Quest International and Firmenich. We currently compete and will continue to compete in the future with these companies in collaborating with and selling flavor products and technologies to manufacturers of packaged food and beverage products. Many of these companies have substantially greater capital resources, research and development resources and experience, manufacturing capabilities, regulatory expertise, sales and marketing resources, established relationships with consumer products companies and production facilities.

        We are not aware of any products currently available or under development that would compete with the flavors and flavor enhancers that we are developing under our sweet and salt programs. Savory flavor enhancers, however, particularly inosine monophosphate, or IMP, are commercially available, and we will compete with the companies that produce these flavors. IMP is widely available and is a generally accepted food additive by the packaged food and beverage industry. As a result, our existing and future collaborators may choose to incorporate IMP or similar savory flavor enhancers into their packaged food and beverage products instead of our savory flavors and flavor enhancers.

        We may in the future face competition from life sciences and other technology companies and other commercial enterprises. These entities engage as we do in biotechnology, biology or chemistry and could apply this technology to the discovery and development of flavors and flavor enhancers. We are aware of one other company, Linguagen Corp., a privately-held company that we believe is involved in research on sweetness potentiators, salt substitutes and bitter blockers, specifically adenosine 5' monophosphate, or AMP, and has announced research and development collaborations with The Solae Company and Perrigo Company in the field of flavor discovery and modification. We cannot guarantee

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that products developed as a result of our competitors' existing or future collaborations will not compete with our flavors and flavor enhancers.

        Universities and public and private research institutions are also potential competitors. While these organizations primarily have educational objectives, they may develop proprietary technologies related to the sense of taste or secure patent protection that we may need for the development of our technologies and products. We may attempt to license these proprietary technologies, but these licenses may not be available to us on acceptable terms, if at all.

        Our competitors, either alone or with their collaborative partners, may succeed in developing technologies or discovering flavors or flavor enhancers that are more effective, safer, more affordable or more easily commercialized than ours, and our competitors may obtain intellectual property protection or commercialize products sooner than we do. Developments by others may render our product candidates or our technologies obsolete. In addition, our current product discovery and development collaborators are not prohibited from entering into research and development collaboration agreements with third parties in any product field. Our failure to compete effectively would have a significant adverse effect on our business, financial condition and results of operations.

        Because our business strategy involves the development and sale by our collaborators of commercial products incorporating our flavors and flavor enhancers, we may be sued for product liability. We may be held liable if any product we develop and commercialize, or any product our collaborators commercialize that incorporates any of our flavors or flavor enhancers, causes injury or is found otherwise unsuitable during product testing, manufacturing, marketing, sale or consumer use. In addition, the safety studies we must perform and the FEMA GRAS determination we must obtain prior to incorporating our flavors and flavor enhancers into a commercial product will not protect us from any such liability.

        If we and our collaborators commence sale of commercial products we will need to obtain product liability insurance, and this insurance may be prohibitively expensive, or may not fully cover our potential liabilities. Inability to obtain sufficient insurance coverage at an acceptable cost or otherwise to protect against potential product liability claims could prevent or inhibit the commercialization of products developed by us or our product discovery and development collaborators. We may be obligated to indemnify our product discovery and development collaborators for product liability or other losses they incur as a result of our flavors and flavor enhancers. Any indemnification we receive from such collaborators for product liability that does not arise from our flavors and flavor enhancers may not be sufficient to satisfy our liability to injured parties. If we are sued for any injury caused by our flavors and flavor enhancers or products incorporating our flavors and flavor enhancers, our liability could exceed our total assets.

        Our discovery and development process requires our employees to routinely handle hazardous chemical, radioactive and biological materials. Our operations also produce hazardous waste products. Federal, state and local laws and regulations govern the use, manufacture, storage, handling and disposal of these materials. As a result of the increase in size of our operations, we were recently re-classified from a small quantity to a large quantity generator of hazardous waste. This reclassification may result in increased scrutiny of our operations by the Environmental Protection Agency. Compliance with applicable environmental laws and regulations may be expensive, and current or future environmental regulations may impair our discovery and development efforts.

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        In addition, we cannot entirely eliminate the risk of accidental contamination or discharge and any resultant injury from these materials. Our property and casualty policy has very limited coverage for damages or cleanup costs related to radioactive contamination and pollutants and our general liability insurance policy excludes coverage for damages and fines arising from biological or hazardous waste disposal or contamination. We do not carry specific biological or hazardous waste insurance. We may be forced to curtail operations or be sued for any injury or contamination that results from our use or the use by others of these materials, and our liability may exceed our total assets.

Risks Related To Our Common Stock

        Prior to this offering, there has been no public market for shares of our common stock. An active, liquid trading market may not develop following completion of this offering or, if developed, may not be maintained.

        We will determine the initial public offering price for the shares through negotiations with representatives of the underwriters. This price may not be indicative of prices that will prevail later in the trading market. The market price of the common stock may decline below the initial public offering price, and you may not be able to resell your shares at or above the initial public offering price.

        The stock market, from time to time, has experienced significant price and volume fluctuations that are unrelated to the operating performance of companies. The market prices of technology companies, particularly life science companies, have been highly volatile. In addition, our stock price may be particularly volatile because investors may compare us to traditional flavor companies as well as technology-based companies regardless of our individual operating results. Our stock may be affected by this type of market volatility, as well as by our own performance. The following factors, among other risk factors, may have a significant effect on the market price of our common stock:

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        We will retain broad discretion over the use of proceeds from this offering. Stockholders may not deem the actual uses desirable, and our use of the proceeds may not yield a significant return or any return at all. We intend to use a majority of the proceeds from this offering to continue the discovery and development of flavors and flavor enhancers in our savory, sweet and salt enhancer programs and to use the remaining proceeds to maintain and expand our intellectual property position, fund the discovery of new taste receptors and acquisition of technologies, product rights or businesses, although we have no current agreements or commitments for, nor are we actively seeking, any such acquisition, and to fund working capital and general corporate purposes.

        Because of the number and variability of factors that determine the actual uses of the net proceeds from this offering, we cannot guarantee that the actual uses will not vary substantially from our currently planned uses.

        The historical net tangible book value of our common stock as of March 31, 2004 is approximately $14.8 million, or approximately $4.27 per share, based on the number of shares outstanding as of March 31, 2004. We expect the initial public offering price to be substantially higher than $4.27 per share. Therefore, if you purchase shares of our common stock in this offering at an assumed price of $14 per share, you will incur immediate and substantial dilution in net tangible book value of $10.29 per share. You may incur additional dilution if the holders of outstanding options or warrants exercise those options or warrants. All purchasers of shares in this offering will contribute 52% of the total amount of the purchase price that has been paid by all shareholders but will own only 24% of shares outstanding after the offering. Additional information regarding the dilution to investors in this offering is included in this prospectus under the heading "Dilution."

        Provisions of our amended and restated certificate of incorporation and bylaws, as well as provisions of Delaware law, could make it more difficult for a third party to acquire us, even if doing so would benefit our stockholders. These provisions may also make it difficult for stockholders to remove and replace our board of directors and management. These provisions:

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        In addition, the requirements of Section 203 of the Delaware General Corporation Law may discourage, delay or prevent a third party from acquiring us. These requirements are described in "Description of Capital Stock—Delaware Anti-Takeover Law and Certain Charter Provisions."

        Recently enacted and proposed changes in the laws and regulations affecting public companies, including the provisions of the Sarbanes-Oxley Act of 2002 and rules adopted or proposed by the Securities and Exchange Commission, or SEC, and by the Nasdaq Stock Market, will result in increased costs to us as we evaluate the implications of these laws and regulations and respond to their requirements. These laws and regulations could make it more difficult or more costly for us to obtain certain types of insurance, including director and officer liability insurance, and we may be forced to accept reduced policy limits and coverage or incur substantially higher costs to obtain the same or similar coverage. The impact of these events could also make it more difficult for us to attract and retain qualified persons to serve on our board of directors, our board committees or as executive officers. We are presently evaluating and monitoring developments with respect to these laws and regulations and cannot predict or estimate the amount or timing of additional costs we may incur to respond to their requirements.

        After this offering, our officers, directors and stockholders with at least 5% of our stock will together control approximately 53% of our outstanding common stock. If these officers, directors and principal stockholders act together, they will be able to exert a significant degree of influence over our management and affairs and over matters requiring stockholder approval, including the election of directors and approval of mergers or other business combination transactions. The interests of this concentration of ownership may not always coincide with our interests or the interests of investors in this offering or other stockholders. For instance, officers, directors and principal stockholders, acting together, could cause us to enter into transactions or agreements that we would not otherwise consider. Similarly, this concentration of ownership may have the effect of delaying or preventing a change in control of our company otherwise favored by our other stockholders. This concentration of ownership could depress our stock price.

        The market price of our common stock could decline as a result of sales by existing holders of a large number of shares of our common stock in the public market after the closing of this offering or the perception that these sales could occur. These sales could make it more difficult for us to sell equity securities in the future at a time and price that we deem appropriate. After this offering, we will have outstanding 24,677,801 shares of common stock, based on the number of shares outstanding as of March 31, 2004. All the shares sold in this offering will be freely tradable and holders of 15,214,719 shares of common stock and warrants to purchase 14,285 shares of common stock will have rights, subject to some conditions, to require us to file registration statements covering the shares they currently hold or may acquire upon exercise of the warrants, or to include these shares in registration statements that we may file for ourselves or other stockholders. A substantial number of shares may be sold in the public market immediately following the expiration of contractual "lock-up" restrictions to which our stockholders are subject, or after the expiration of the "lock-up," immediately after investment funds that currently own a large number of our shares distribute those shares to their limited partners. These "lock-up" restrictions are described in the "Underwriting" section of this

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prospectus. The sale of a substantial number of shares, especially in a short period of time, could result in a significant decline in our stock price. After this offering we also intend to register up to approximately 3,539,353 shares of our common stock for sale upon exercise of outstanding stock options issued pursuant to compensatory benefit plans or reserved for future issuance pursuant to our amended and restated 2004 equity incentive plan and 2004 employee stock purchase plan. In addition, the market price of our common stock could decline if we sell additional equity securities in connection with financings or collaboration agreements.

        We have paid no cash dividends on any of our classes of capital stock to date, and we currently intend to retain our future earnings, if any, to fund the development and growth of our business. In addition, the terms of any future debt or credit facility may preclude us from paying any dividends. As a result, capital appreciation, if any, of our common stock will be your sole source of potential gain for the foreseeable future.

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FORWARD-LOOKING STATEMENTS

        This prospectus contains forward-looking statements that are based on our management's beliefs and assumptions and on information currently available to our management. The forward looking statements are contained principally in the sections entitled "Summary," "Risk Factors," "Management's Discussion and Analysis of Financial Condition and Results of Operations" and "Business." Forward-looking statements include, but are not limited to, statements about:

        In some cases, you can identify forward-looking statements by terms such as "may," "will," "should," "could," "would," "expects," "plans," "anticipates," "believes," "estimates," "projects," "predicts," "potential" and similar expressions intended to identify forward-looking statements. These statements involve known and unknown risks, uncertainties and other factors which may cause our actual results, performance or achievements to be materially different from any future results, performances, time frames or achievements expressed or implied by the forward-looking statements. We discuss many of these risks, uncertainties and other factors in this prospectus in greater detail under the heading "Risk Factors." Given these risks, uncertainties and other factors, you should not place undue reliance on these forward-looking statements. Also, these forward-looking statements represent our estimates and assumptions only as of the date of this prospectus. You should read this prospectus and the documents that we reference in this prospectus and have filed as exhibits to the registration statement, of which this prospectus is a part, completely and with the understanding that our actual future results may be materially different from what we expect. We hereby qualify all of our forward-looking statements by these cautionary statements. The forward-looking statements contained in this prospectus are excluded from the safe harbor protection provided by the Private Securities Litigation Reform Act of 1995 and Section 27A of the Securities Act of 1933, as amended, or the Securities Act.

        Information regarding market and industry statistics contained in the "Summary" and "Business" sections of this prospectus is included based on information available to us that we believe is accurate. It is generally based on academic and other publications that are not produced for purposes of securities offerings or economic analysis. We have not reviewed or included data from all sources and cannot assure you of the accuracy of the market and industry data we have included.

        Except as required by law, we assume no obligation to update these forward-looking statements publicly, or to update the reasons actual results could differ materially from those anticipated in these forward-looking statements, even if new information becomes available in the future.


NOTICE TO INVESTORS

        You should rely only on the information contained in this prospectus. We have not authorized anyone to provide you with different or additional information. We are not making an offer of these securities in any state where an offer is not permitted. You should not assume that the information provided by this prospectus is accurate as of any date other than the date on the front of this prospectus, regardless of the time of delivery of this prospectus or any sale of our common stock.

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USE OF PROCEEDS

        We estimate that the net proceeds from this offering without the exercise of the underwriters' over-allotment option will be approximately $76.7 million, based upon an assumed initial public offering price of $14.00 per share and after deducting estimated underwriting discounts and estimated offering expenses. If the underwriters exercise their over-allotment option in full, we estimate that the net proceeds will be approximately $88.4 million.

        We estimate we will use approximately $40 million to $52 million of the net proceeds of this offering, assuming no exercise of the underwriters' over-allotment option, to continue the discovery and development of flavors and flavor enhancers in our sweet, savory and salt enhancer programs. In particular, we expect to use these amounts to:

Because we track and forecast our expenses by type of expense rather than by specific program, we cannot estimate more specifically how much of the proceeds will be spent on any particular program.

        We estimate we will use approximately $12 million to $19 million of the net proceeds of this offering, assuming no exercise of the underwriters' over-allotment option, to maintain and expand our intellectual property position and fund the discovery of new taste receptors and acquisition of technologies, product rights or businesses, although we have no current agreements or commitments for, nor are we actively seeking, any such acquisition.

        We estimate we will use approximately $12 million to $19 million of the net proceeds of this offering, assuming no exercise of the underwriters' over-allotment option, to fund working capital and general corporate purposes, including costs related to executive, legal, risk management, business and corporate development functions, finance and accounting.

        We have not determined the amount or timing of these expenditures. To the extent we use more of the net proceeds of this offering in any one of the above categories, less of the proceeds will be available for the other categories. Pending the contemplated uses described above, we will invest the net proceeds of this offering in short-term, interest-bearing, investment-grade securities.

        Our management has broad discretion over the use of the net proceeds of this offering among the categories set forth above and other uses. The amount and timing of our actual expenditures and our future liquidity and capital requirements are subject to change and will depend on many factors, some of which may be beyond our control, including:

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        We may not be able to discover compounds that have the desired enhancement effect, that are safe, that are eligible for FEMA GRAS determination or that have appropriate attributes required for use in successful commercial products. However, assuming that our current flavor and flavor enhancer discovery and development programs proceed as we currently anticipate, we expect that the net proceeds from this offering, together with our existing capital resources, interest income and committed revenue from our existing collaborations, should be sufficient to fund our anticipated operating expenses and capital requirements for over 12 months, and should allow us to obtain FEMA GRAS determination for at least one flavor or flavor enhancer compound in each of our current programs.


DIVIDEND POLICY

        We have never declared or paid any cash dividends on shares of our capital stock. We currently intend to retain all available funds and any future earnings to support operations and to finance the growth and development of our business and do not intend to pay cash dividends on our common stock for the foreseeable future. Any determination related to payments of future dividends will be at the discretion of our board of directors after taking into account various factors that our board of directors deems relevant, including our financial condition, operating results, current and anticipated cash needs, plans for expansion and debt restrictions.

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CAPITALIZATION

        The following table sets forth our capitalization as of March 31 2004:

        You should read the information in this table together with our financial statements and notes and "Management's Discussion and Analysis of Financial Condition and Results of Operations" appearing elsewhere in this prospectus.

 
  As of March 31, 2004
 
 
  Actual
  As Adjusted
 
 
   
  (Unaudited)

 
 
  (In thousands, except share and per share data)

 
Cash, cash equivalents and investments available-for-sale   $ 15,110   $ 91,810  
   
 
 
Long-term obligations, less current portion   $   $  
   
 
 
Stockholders' equity:              
  Convertible preferred stock $.001 par value; 37,079,311 shares authorized and 25,825,826 issued and outstanding, actual; 7,500,000 shares authorized and no shares issued and outstanding as adjusted     70,150      
  Common stock, $.001 par value, 51,495,732 shares authorized; 3,463,082 shares issued and outstanding, actual; 120,000,000 shares authorized and 24,677,801 shares issued and outstanding as adjusted     3     25  
  Additional paid-in capital     21,535     168,363  
  Deferred compensation     (7,263 )   (7,263 )
  Accumulated deficit     (69,641 )   (69,641 )
   
 
 
    Total stockholders' equity     14,784     91,484  
   
 
 
      Total capitalization   $ 14,784   $ 91,484  
   
 
 

        The number of shares of common stock to be outstanding immediately after this offering is based on the number of shares outstanding as of March 31, 2004. This number excludes, as of March 31, 2004:

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DILUTION

        If you invest in our common stock in this offering, your ownership interest will be diluted to the extent of the difference between the initial public offering price per share and the pro forma net tangible book value per share of our common stock after this offering. The historical net tangible book value of our common stock as of March 31, 2004 was approximately $14.8 million, or approximately $4.27 per share, based on the number of shares outstanding as of March 31, 2004. Historical net tangible book value per share is determined by dividing the number of outstanding shares of our common stock into our total tangible assets (total assets less intangible assets) less total liabilities.

        Investors participating in this offering will incur immediate, substantial dilution. After giving effect to the sale of common stock offered in this offering at the assumed public offering price of $14.00 per share, and after deducting the estimated underwriting discounts and estimated offering expenses payable by us, and after giving effect to the conversion of all outstanding shares of preferred stock into 15,214,719 shares of common stock upon completion of this offering, our pro forma as adjusted net tangible book value as of March 31, 2004 would have been approximately $91.5 million, or approximately $3.71 per share of common stock. This represents an immediate increase in pro forma as adjusted net tangible book value of $2.92 per share to existing stockholders and an immediate dilution of $10.29 per share to new investors participating in this offering. The following table illustrates this per share dilution:

Assumed initial public offering price per share         $ 14.00
Historical net tangible book value per share as of March 31, 2004   $ 4.27      
Pro forma decrease in net tangible book value per share attributable to conversion of convertible preferred stock   $ (3.48 )    
   
     
Pro forma net tangible book value per share before this offering   $ 0.79      
Pro forma increase in net tangible book value per share attributable to new investors   $ 2.92      
   
     
Pro forma as adjusted net tangible book value per share after this offering         $ 3.71
         
Pro forma dilution per share to new investors in this offering         $ 10.29
         

        The following table summarizes, on a pro forma as adjusted basis as of March 31, 2004, the differences between the number of shares of common stock purchased from us, the total consideration and the average price per share paid by existing stockholders and by new investors, after deducting estimated underwriting discounts and commissions and estimated offering expenses, at an assumed initial public offering price of $14.00 per share:

 
  Shares Purchased
  Total Consideration
   
 
  Average Price
Per Share

 
  Number
  Percent
  Amount
  Percent
Existing stockholders   18,677,801   76 % $ 71,203,000   48 % $ 3.81
New investors   6,000,000   24 %   76,700,000   52 %   12.78
   
 
 
 
     
  Total   24,677,801   100 % $ 147,903,000   100 % $ 5.99
   
 
 
 
     

        The discussion and tables above assume no exercise of the underwriters' over-allotment option or exercise of any outstanding options or warrants. If the underwriters' over-allotment option is exercised in full, the number of shares of common stock held by existing stockholders will be reduced to 73% of the total number of shares of common stock to be outstanding after this offering, and the number of shares of common stock held by new investors will be increased to 6,900,000 shares or 27% of the total number of shares of common stock to be outstanding after this offering.

27



        As of March 31, 2004, there were:

        To the extent that any of these options or warrants are exercised, new options are issued under our equity incentive plans or we issue additional shares of common stock in the future, there will be further dilution to new investors.

28



SELECTED FINANCIAL DATA

        The statements of operations data for the years ended December 31, 2001, 2002 and 2003 and the balance sheet data as of December 31, 2002 and 2003 have been derived from our audited financial statements, which have been audited by Ernst & Young LLP, an independent registered public accounting firm, and included elsewhere in this prospectus. Historical results are not necessarily indicative of future results. The statements of operations data for the years ended December 31, 1999 and 2000 and the balance sheet data as of December 31, 1999, 2000 and 2001 have been derived from our audited financial statements, which have been audited by Ernst & Young LLP, an independent registered public accounting firm, but are not included in this prospectus. The statements of operations data for the three months ended March 31, 2003 and 2004 and the balance sheet data as of March 31, 2004, are derived from our unaudited financial statements, which are included elsewhere in this prospectus. The following selected financial data should be read in conjunction with the financial statements and the notes to such statements and "Management's Discussion and Analysis of Financial Condition and Results of Operations."

 
  Years ended December 31,
  Three Months Ended March 31,
 
 
  1999
  2000
  2001
  2002
  2003
  2003
  2004
 
 
   
   
   
   
   
  (Unaudited)

  (Unaudited)

 
 
  (In thousands, except share and per share data)

 
Statements of Operations Data:                                            
Revenue under collaborative agreements   $   $ 115   $ 2,275   $ 7,327   $ 9,537   $ 2,203   $ 2,241  
Operating expenses:                                            
  Research and development     155     6,137     16,263     17,635     16,802     4,002     3,950  
  General and administrative     1,172     3,196     4,952     4,154     4,096     1,275     1,010  
  Stock-based compensation:                                            
    Research and development     84     1,854     1,240     540     1,293     248     593  
    General and administrative     12     372     378     158     4,997     30     1,687  
   
 
 
 
 
 
 
 
      Total operating expenses     1,423     11,559     22,833     22,487     27,188     5,555     7,240  
   
 
 
 
 
 
 
 
Loss from operations     (1,423 )   (11,444 )   (20,558 )   (15,160 )   (17,651 )   (3,352 )   (4,999 )
Interest income (expense), net     (10 )   699     329     339     198     56     40  
   
 
 
 
 
 
 
 
Net loss   $ (1,433 ) $ (10,745 ) $ (20,229 ) $ (14,821 ) $ (17,453 ) $ (3,296 ) $ (4,959 )
   
 
 
 
 
 
 
 

Basic and diluted net loss per share(1):

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 
 
Historical

 

$

(2.14

)

$

(8.79

)

$

(12.35

)

$

(6.85

)

$

(7.16

)

$

(1.41

)

$

(1.88

)
   
 
 
 
 
 
 
 
 
Pro Forma

 

 

 

 

 

 

 

 

 

 

 

 

 

$

(0.99

)

 

 

 

$

(0.28

)
                           
       
 
Shares used to compute basic and diluted net loss per share(1):                                            
 
Historical

 

 

668,601

 

 

1,223,061

 

 

1,637,488

 

 

2,162,900

 

 

2,436,174

 

 

2,342,237

 

 

2,643,873

 
   
 
 
 
 
 
 
 
 
Pro Forma

 

 

 

 

 

 

 

 

 

 

 

 

 

 

17,650,893

 

 

 

 

 

17,858,592

 
                           
       
 

(1)
Please see Note 1 to our financial statements for an explanation of the method used to calculate the historical and pro forma net loss per share and the number of shares used in the computation of the per share amounts.

29


 
  As of December 31,
   
 
 
  As of March 31, 2004
 
 
  1999
  2000
  2001
  2002
  2003
 
 
  (in thousands)

 
 
   
   
   
   
   
  (Unaudited)

 
Balance Sheet Data:                                      
  Cash, cash equivalents and investments available-for-sale   $ 11,051   $ 14,540   $ 24,726   $ 27,586   $ 17,058   $ 15,110  
  Working capital     10,915     12,345     20,862     22,667     15,160     12,532  
  Total assets     11,141     26,485     34,402     34,720     20,440     18,666  
  Long-term obligations             729     906          
  Accumulated deficit     (1,433 )   (12,179 )   (32,408 )   (47,229 )   (64,682 )   (69,641 )
  Total stockholders' equity     10,995     23,939     29,057     28,219     17,104     14,784  

30



MANAGEMENT'S DISCUSSION AND ANALYSIS
OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS

         The following discussion and analysis of our financial condition and results of operations should be read together with our financial statements and related notes appearing elsewhere in this prospectus. This discussion and analysis contains forward-looking statements that involve risks, uncertainties and assumptions. The actual results may differ materially from those anticipated in these forward-looking statements as a result of many factors, including but not limited to those set forth under "Risk Factors" and elsewhere in this prospectus.

Overview

        We are a biotechnology company using proprietary taste receptor-based assays and screening technologies to discover and develop novel flavors and flavor enhancers for the packaged food and beverage industry. We believe our flavor ingredients will enable packaged food and beverage companies to improve the nutritional profile of their products and generate cost of goods savings, while maintaining or enhancing taste. We license our flavor ingredients to our collaborators on an exclusive basis, which we believe will provide these companies with the ability to differentiate their products. We have entered into product discovery and development collaborations with four of the world's leading packaged food and beverage companies: Campbell Soup Company, The Coca-Cola Company, Kraft Foods Global, Inc. and Nestlé SA. We currently anticipate that we will derive all of our revenues from existing and future collaborations. Our existing collaboration agreements provide for research and development funding, milestone payments based upon our achievement of research or development goals and, in the event of commercialization, royalties on future sales of consumer products incorporating our flavors and flavor enhancers. Our current programs focus on the development of savory, sweet and salt flavors or flavor enhancers. In addition, future collaboration agreements may provide for up-front license fees.

        We were incorporated in September 1998 and commenced operations in April 1999. Since that time, we have devoted substantially all of our resources to discovering and developing flavors and flavor enhancers for the packaged food and beverage industry.

        We have incurred significant losses since inception, with an accumulated deficit of $69.6 million as of March 31, 2004 primarily due to ongoing expenditures related to our research programs. We expect to incur additional losses over at least the next three years as we continue to develop flavors and flavor enhancers. Our results of operations have fluctuated from period to period and likely will continue to fluctuate substantially in the future based upon:

        We have a limited history of operations and, to date, we have not generated any revenues from sales of our flavors or flavor enhancers. We have financed our operations primarily through private placements of preferred stock as well as research and development payments and milestone payments under our product discovery and development collaborations.

        Our business is subject to significant risks, including but not limited to, the risks inherent in the regulatory approval process, the research and development process and competition from other products and technologies.

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Revenue

        We derive revenue from our product discovery and development collaborations. Revenue under collaborative agreements has increased each year since our inception. To date, our revenue has come solely from research and development funding and milestone payments under our product discovery and development collaboration agreements with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé. As of March 31, 2004, we have recognized cumulative revenue under our collaborations of $21.5 million. If any of these collaborative agreements were to be terminated, this could have a significant effect on future revenues.

        In 2001, research and development payments represented all of our revenue. For the years 2002 and 2003, and the three months ended March 31, 2004, research and development payments were our primary source of revenue. Based on current collaborations, we anticipate that substantially all of our revenues in the near future will be derived from research and development payments, and we may receive additional milestone payments in the future upon the achievement of certain goals set forth in our collaboration agreements.

        In addition, in the event our collaborators launch products incorporating our flavors and flavor enhancers, we will receive royalty payments based upon the future sales of those products, which, if received, could be significantly larger than research and development funding or milestone payments. In order for us to generate royalty revenue and become profitable, we must retain our existing or establish new product discovery and development collaborations and our collaborators must commercialize products incorporating one or more of our flavors or flavor enhancers. Our ability to generate royalty revenue is uncertain and will depend upon our ability to meet particular research, development and commercialization objectives.

Research and Development

        Our research and development expenses consist primarily of costs associated with our discovery and development efforts in connection with our three primary programs, savory, sweet and salt. We track research and development costs by the type of cost incurred rather than by project. Research and development costs are comprised of salaries and other personnel related expenses, facilities and depreciation, research and development supplies, patent and licensing, and outside services. We charge research and development expenses to operations as incurred.

        The research and development payments we have received from our collaboration agreements with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé historically have not covered all of our research and development expenses. We expect that our research and development expenses are likely to increase in the future as a result of our existing product discovery and development collaborations, internal product discovery and development activities and technology development and any expansion of these activities.

        At this time, due to the risks inherent in the discovery of flavors and flavor enhancers, we are unable to estimate with any certainty the costs we will incur in the continued development of our flavors and flavor enhancers for commercialization. We generally estimate that the development of a flavor or flavor enhancer under one of our research and development programs will take from 3.5 to 7 years from initiation of research through FEMA GRAS determination. We estimate that we will receive FEMA GRAS determination on lead product candidates in our savory, sweet and salt programs in 12 to 18 months, 18 to 36 months and 30 to 60 months, respectively.

        We anticipate that we will make determinations regarding the research and development projects to pursue and the funding of each project on an ongoing basis in response to the progress of each discovery and development program, as well as an ongoing assessment of its market potential. We

32



cannot be certain when any net cash inflow from the commercialization of our flavors and flavor enhancers will commence.

        In 2000, we paid $2.5 million to acquire a perpetual license from Aurora for the rights to the use of certain assays and paid Incyte $6.5 million for access to Incyte's database for a three year period. The use of these assays and the receptors identified from the database have been utilized in our efforts with its collaborative partners. The license and database were determined to have alternative future uses and therefore, capitalized and amortized to research and development expense over the estimated useful life of the license and over the three years of the access to the database.

        Our ability to complete the development of our current product candidates is subject to many risks and uncertainties. These risks include the risks, among others, that:

        If we do not complete the development of our flavors and flavor enhancers on a timely basis, our collaborators may terminate or not renew our collaboration agreements, we may begin receiving revenue from the commercialization of products incorporating our flavors and flavor enhancers later than anticipated, or not at all, and it may be more difficult to enter into new collaboration agreements. In any of these cases, we may require substantial additional funding in order to continue development of our flavors and flavor enhancers.

General and Administrative

        General and administrative expenses consist primarily of salaries and other personnel related expenses related to legal, financial and other administrative functions. We expect that our general and administrative expenses will increase as a result of becoming a public company due to the additional reporting requirements imposed on public companies, particularly in light of recently enacted legislation such as the Sarbanes-Oxley Act of 2002 and related governmental and securities industry rules and regulations.

Stock-Based Compensation

        We have recorded deferred compensation for stock options and stock awards granted equal to the difference between the exercise price and the fair value of our common stock on the date of grant. We record options or awards issued to non-employees at their fair value in accordance with the Statement of Financial Accounting Standards No. 123, Accounting for Stock-Based Compensation , and periodically remeasure them in accordance with Emerging Issues Task Force No. 96-18, Accounting for Equity Instruments That Are Issued to Other Than Employees for Acquiring or in Conjunction with Selling Goods or Services , and recognize them over the service period. In connection with the grant of stock options to employees, we recorded deferred stock-based compensation of $13.3 million and $426,000 for the year ended December 31, 2003 and the three months ended March 31, 2004, respectively. We recorded these amounts as a component of stockholders' equity and will amortize them, on an accelerated basis, as a non-cash charge to operations over the vesting period of the options. We recorded employee and non-employee stock-based compensation expense of $1.6 million, $698,000, $6.3 million, $278,000 and $2.3 million for the years ended December 31, 2001, 2002 and 2003 and the three months ended March 31, 2003 and 2004, respectively. We expect that the charges to be recognized in future periods

33



from amortization of deferred compensation related to employee stock option grants will be $5.0 million, $2.4 million, $1.0 million and $146,000 for the years ending December 31, 2004, 2005, 2006 and 2007, respectively.

Results of Operations

Three Months Ended March 31, 2003 and 2004

        We recorded revenue of $2.2 million for each of the three months ended March 31, 2003 and 2004. Research and development payments under collaborations with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé accounted for 100% of total revenue for the three months ended March 31, 2004.

        Our research and development expenses were $4.0 million for each of the three months ended March 31, 2003 and 2004. Research and development expenses for the three months ended March 31, 2003 and 2004 are net of stock-based compensation expenses of $248,000 and $593,000, respectively. The $53,000 decrease in expenses from the three months ended March 31, 2003 to 2004 was primarily the result of the net effect of the following costs:

        Salaries and Personnel.     Our expenses for research and development personnel, including consultants, were $1.2 million and $1.6 million for the three months ended March 31, 2003 and 2004, respectively. The increase of $390,000 was primarily attributable to increased salaries and employee benefits expenses, offset in part by reduced consulting expenses. Our research and development staff increased from an average of 44 for the three months ended March 31, 2003 to an average of 57 for the three months ended March 31, 2004. The increase in staff was primarily to support the optimization of product candidates from our research programs.

        Facilities and Depreciation.     Our facilities and depreciation expenses were $1.0 million and $1.1 million for the three months ended March 31, 2003 and 2004, respectively. The increase of $58,000 was primarily attributable to expanding into additional space within our facility to accommodate our additional research and development personnel, offset by reduced depreciation expenses.

        Research and Development Supplies.     Our expenses for supplies used in research and development were $660,000 and $527,000 for the three months ended March 31, 2003 and 2004, respectively. The decrease of $133,000 was primarily attributable to reduced screening activity as our research and development activities advanced into certain less expensive optimization activities.

        Patent and Licensing.     Our patent and licensing expenses were $1.1 million and $391,000 for the three months ended March 31, 2003 and 2004, respectively. The decrease of $671,000 was primarily attributable to reduced licensing fees. Included in these costs was amortization of licenses totaling $752,000 for the three months ended March 31, 2003. The related licenses were fully amortized at December 31, 2003 and we therefore did not have any costs associated with the amortization of these licenses for the three months ended March 31, 2004.

        Outside Services.     Our outside service expenses were $32,000 and $272,000 for the three months ended March 31, 2003 and 2004, respectively. The increase of $240,000 was primarily attributable to outsourced chemical synthesis and analysis of product candidates in 2004.

        Our general and administrative expenses were $1.3 million and $1.0 million for the three months ended March 31, 2003 and 2004, respectively. General and administrative expenses for the three

34


months ended March 31, 2003 and 2004 are net of stock-based compensation expenses of $30,000 and $1.7 million, respectively. The $264,000 decrease in expenses from the three months ended March, 31 2003 to 2004 was primarily attributable to a decrease of $247,000 in personnel and related expenses and a decrease of $62,000 in outside legal fees, offset by an increase of $45,000 in office and miscellaneous costs.

        Our stock-based compensation expenses increased from $278,000 for the three months ended March 31, 2003 to $2.3 million for the three months ended March 31, 2004. The increase was due to the increase in fair value of options granted in 2003 as a result of this offering.

        Interest income was $90,000 and $40,000 for the three months ended March 31, 2003 and 2004, respectively. The decrease of $50,000 was primarily attributable to lower interest rates and lower average balances of cash, cash equivalents and investments available-for-sale. Interest expense was $34,000 and $0 for the three months ended March 31, 2003 and 2004, respectively. Interest expense decreased due to the payment in full of equipment financing debt in 2003.

Years Ended December 31, 2002 and 2003

        We recorded revenue of $7.3 million and $9.5 million for the years ended December 31, 2002 and 2003, respectively. The $2.2 million increase in revenue in 2003 was primarily attributable to a full year of research and development revenue under collaborations with Coca-Cola and Nestlé started in April 2002. Research and development payments and milestone payments under collaborations with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé accounted for 100% of total revenue in 2003.

        Our research and development expenses were $17.6 million and $16.8 million for the years ended December 31, 2002 and 2003, respectively. Research and development expenses for the years ended December 31, 2002 and 2003 are net of stock-based compensation expenses of $540,000 and $1.3 million, respectively. The $833,000 decrease in expenses from 2002 to 2003 was primarily the result of the net effect of the following costs:

        Salaries and Personnel.     Our expenses for research and development personnel, including consultants, were $5.0 million and $5.5 million for the years ended December 31, 2002 and 2003, respectively. The increase of $515,000 was primarily due to increased salaries and recruiting expenses. Our research and development staff increased from an average of 45 for the year ended December 31, 2002 to an average of 50 for the year ended December 31, 2003. The increase in staff was primarily to support the optimization of product candidates from our research programs.

        Facilities and Depreciation.     Our facilities and depreciation expenses were $3.1 million and $4.5 million for the years ended December 31, 2002 and 2003, respectively. The increase of $1.4 million was primarily attributable to expanding into additional space within our facility to accommodate additional research and development personnel hired for optimization of product candidates.

        Research and Development Supplies.     Our expenses for supplies used in research and development were $3.3 million and $2.3 million for the years ended December 31, 2002 and 2003, respectively. The decrease of $1.0 million was primarily attributable to reduced chemical library purchases and related

35



screening activity as our research and development activities advanced into certain less expensive compound optimization activities.

        Patent and Licensing.     Our patent and licensing expenses were $4.1 million and $3.7 million for the years ended December 31, 2002 and 2003, respectively. The decrease of $362,000 was primarily attributable to reduced outside patent legal fees. Included in these costs was amortization of licenses totaling $3.0 million and $2.9 million in 2002 and 2003, respectively. The related licenses are fully amortized at December 31, 2003.

        Outside Services.     Our outside service expenses were $2.0 million and $479,000 for the years ended December 31, 2002 and 2003, respectively. The decrease of $1.5 million was primarily attributable to the full year impact of the conclusion in 2002 of research and development support performed by Aurora, which totaled $2.0 million, partially offset by outsourced chemical synthesis and analysis of product candidates in 2003.

        Our general and administrative expenses were $4.2 million and $4.1 million for the years ended December 31, 2002 and 2003, respectively. General and administrative expenses for the years ended December 31, 2002 and 2003 are net of stock-based compensation expenses of $158,000 and $5.0 million, respectively. The $57,000 decrease in expenses from 2002 to 2003 was primarily attributable to a decrease of $492,000 in personnel and related expenses attributable to reduced business development activities and financing activities, offset by an increase of $280,000 in facility costs as a result of adding space and $155,000 in legal and miscellaneous costs.

        Our stock-based compensation expenses increased from $698,000 for the year ended December 31, 2002 to $6.3 million for the year ended December 31, 2003. The increase was a result of increased deferred compensation balances associated with this offering.

        Interest income was $496,000 and $268,000 for the years ended December 31, 2002 and 2003, respectively. The decrease of $228,000 was primarily attributable to lower interest rates and lower average balances of cash, cash equivalents and investments available-for-sale. Interest expense was $157,000 and $70,000 for the years ended December 31, 2002 and 2003, respectively. Interest expense decreased due to the payment in full of equipment financing debt in 2003.

Years Ended December 31, 2001 and 2002

        We recorded revenue of $2.3 million and $7.3 million for the years ended December 31, 2001 and 2002, respectively. The $5.1 million increase in revenue in 2002 was primarily attributable to new product discovery and development collaboration agreements with Coca-Cola and Nestlé started in April 2002. Research and development payments and milestone payments under collaborations with Campbell Soup, Coca-Cola, Kraft Foods, and Nestlé accounted for 100% of total revenue in 2002. Research and development payments under collaborations with Campbell Soup and Kraft Foods accounted for 100% of total revenue in 2001.

        Our research and development expenses were $16.3 million and $17.6 million for the years ended December 31, 2001 and 2002, respectively. Research and development expenses for the years ended

36


December 31, 2001 and 2002 are net of stock-based compensation expenses of $1.2 million and $540,000, respectively. The $1.3 million increase in expenses from 2001 to 2002 was primarily the result of the net effect of the following costs:

        Salaries and Personnel.     Our expenses for research and development personnel, including consultants, were $5.0 million and $5.0 million for the years ended December 31, 2001 and 2002, respectively. The decrease of $88,000 was primarily attributable to lower recruiting and relocation expenses offset by an increase in salary expense.

        Facilities and Depreciation.     Our facilities and depreciation expenses were $2.5 million and $3.1 million for the years ended December 31, 2001 and 2002, respectively. The increase of $600,000 was primarily attributable to increased depreciation expense associated with the purchase of screening related equipment in 2002 and increased general facilities costs.

        Research and Development Supplies.     Our expenses for supplies used in research and development were $1.8 million and $3.3 million for the years ended December 31, 2001 and 2002, respectively. The increase of $1.5 million was primarily attributable to increased chemical library purchases and related screening activity as our research and development programs advanced into increased levels of high-throughput screening.

        Patent and Licensing.     Our patent and licensing expenses were $4.2 million and $4.1 million for the years ended December 31, 2001 and 2002, respectively. The decrease of $130,000 was primarily attributable to reduced patent legal fees. Included in such costs was amortization of licenses totaling $3.0 million and $3.0 million in 2001 and 2002, respectively.

        Outside Services.     Our outside service expenses were $2.5 million and $2.0 million for the years ended December 31, 2001 and 2002, respectively. The decrease of $500,000 was primarily attributable to lower expenses related to reduced research and development support performed by Aurora, which was started in November 2000 and completed in October 2002.

        Our general and administrative expenses were $5.0 million and $4.2 million for the years ended December 31, 2001 and 2002, respectively. General and administrative expenses for the years ended December 31, 2001 and 2002 are net of stock-based compensation expenses of $378,000 and $158,000, respectively. The $798,000 decrease in expenses from 2001 to 2002 was primarily the result of costs totaling $585,000 related to an abandoned financing transaction, and a decrease of $380,000 in facility costs related to an increase in sublease payments, offset by a net increase of $167,000 in personnel and miscellaneous costs.

        Our stock-based compensation expenses were $1.6 million and $698,000 for the years ended December 31, 2001 and 2002, respectively. The $900,000 decrease was primarily the result of accelerated amortization of deferred compensation related to an abandoned financing transaction in 2001.

        Interest income was $375,000 and $496,000 for the years ended December 31, 2001 and 2002, respectively. The increase of $121,000 was primarily attributable to higher surplus cash, cash equivalents and investments available-for-sale as a result of the proceeds from our Series E financing in November 2001 and February 2002. Interest expense increased from $46,000 in 2001 to $157,000 in 2002 due to increased levels of equipment financing debt in 2002.

37


Liquidity and Capital Resources

        Since our inception, we have financed our business primarily through private placements of preferred stock, research and development payments under our product discovery and development collaborations with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé and interest income. As of March 31, 2004, we had received in excess of $70.0 million in proceeds from sales of preferred stock. In addition, we had received $22.3 million in non-refundable research and development payments and non-refundable milestone payments from our collaboration agreements and $1.9 million in interest income. Over the remaining life of our current collaboration agreements, we expect to receive an additional $14.2 million in non-refundable research and development payments from our collaborators. In addition, we anticipate we will receive payments in the event we achieve research or development milestones and royalty payments in the event our collaborators commercialize products incorporating our flavors and flavor enhancers. As of March 31, 2004, we had cash, cash equivalents and investments available-for-sale of approximately $15.1 million. Our funds are currently invested in operating accounts, money market funds and United States Treasury and government agency obligations.

        As of March 31, 2004, we had $15.1 million in cash and cash equivalents and investments available-for-sale as compared to $17.1 million as of December 31, 2003, a decrease of $1.9 million. This overall decrease resulted primarily from additional operating losses and capital equipment purchases. Net cash used in operating activities amounted to $2.0 million for the three months ended March 31, 2004, primarily reflecting the net loss occurring for this period of $5.0 million offset by non-cash charges for depreciation of $389,000, stock-based compensation expense of $2.3 million and net decrease of $329,000 in changes in operating assets and liabilities. Net cash provided by investing activities of $1.4 million for the three months ended March 31, 2004 resulted from maturities of available-for-sale securities of $1.8 million offset by $347,000 of equipment purchases. Net cash provided by financing activities was $360,000 for the three months ended March 31, 2004 reflecting proceeds from the exercise of common stock options.

        Our operating activities used cash of $8.7 million in the year ended December 31, 2002 and $8.3 million in the year ended December 31, 2003. Our use of cash for both periods resulted primarily from our losses from operations offset by depreciation and amortization adjustments of $4.8 million and $4.9 million for the years ended December 31, 2002 and 2003, respectively, and amortization of deferred compensation expense of $698,000 and $6.3 million for the years ended December 31, 2002 and 2003, respectively, and changes in our working capital accounts.

        Our investing activities provided cash of $8.1 million in the year ended December 31, 2002, compared to the use of cash of $1.7 million in 2003. Our investing activities in 2002 consisted of $2.4 million in purchases of property and equipment and $5.8 million in net purchase of investments. Our investing activities in 2003 consisted primarily of purchases of property and equipment of $552,000 and purchases and sales of investments for net proceeds of $2.2 million.

        Our financing activities provided cash of $14.0 million in 2002 and used cash of $1.7 million in 2003. Our financing activities in 2002 consisted primarily of the sale of preferred stock to private investors for net proceeds of $13.0 million. Our financing activities in 2003 consisted primarily of the payment in full of $1.8 million in equipment financing loans.

38



        The following summarizes our contractual obligations as of December 31, 2003 (in thousands):

 
  Payments due by period
   
   
 
  Total
  Less than
1 year

  1-3 years
  3-5 years
  More than
5 years

Operating leases   $ 12,331   $ 3,993   $ 8,337   $ 1   $
License payments     446     113     169     74     90
   
 
 
 
 
Total   $ 12,777   $ 4,106   $ 8,506   $ 75   $ 90
   
 
 
 
 

        As of March 31, 2004, we had no long-term debt obligations.

        Our future capital uses and requirements depend on numerous forward-looking factors. These factors may include but are not limited to the following:

    the rate of progress and cost of research and development activities;

    the number and scope of our research activities;

    the costs of filing, prosecuting, defending and enforcing any patent claims and other intellectual property rights;

    our ability to establish and maintain product discovery and development collaborations;

    the effect of competing technological and market developments;

    the terms and timing of any collaborative, licensing and other arrangements that we may establish; and

    the extent to which we acquire or in-license new products, technologies or businesses.

        We believe that the net proceeds of this offering, together with our existing capital resources, interest income and committed revenue from our existing collaborations, should be sufficient to fund our anticipated operating expenses and capital requirements for over 12 months.

        Until we can generate significant cash from our operations, we expect to continue to fund our operations with cash resources primarily generated from the proceeds of this offering and research and development payments and milestone payments under our product discovery and development collaborations. We estimate that the net proceeds from this offering will be approximately $76.7 million, based upon no exercise of the underwriters' over-allotment option and an assumed initial public offering price of $14.00 per share and after deducting estimated underwriting discounts and estimated offering expenses. Under our existing collaboration agreements, assuming all milestones are achieved and we receive all research and development funding, we may be entitled to payments which total up to $19.8 million. In the next twelve months, we anticipate receiving $6.9 million in research and development funding and $375,000 in milestone payments. We may not receive the payments if the collaborations are terminated or not renewed, or if we do not achieve the milestones set forth in the collaboration agreements. In addition, the timing of the receipt of milestone payments in particular is uncertain, as we may achieve milestones significantly earlier or later than we currently expect.

        We expect operating expenses to increase in the future as a result of anticipated increases in expenses for discovery, development, product optimization, regulatory and safety studies for flavors and flavor enhancers and expenses associated with being a public company. We cannot accurately predict the timing and amount of these expenses, which depend on several factors, and it is possible that we may seek additional financing. If we require additional capital to fund our operations and such financing is not available, we may need to curtail or cease operations. Alternatively, we may need to enter into financing arrangements, which could dilute our stockholders' ownership interests and adversely affect their rights.

39



        Since inception, we have not paid federal or state income taxes. As of December 31, 2003, we had federal net operating loss carryforwards of approximately $50.2 million, which begin to expire in 2019. As of December 31, 2003, the net operating loss carryforwards for state tax purposes were approximately $11.7 million, which begin to expire in 2009. Our utilization of the net operating losses may be subject to substantial annual limitations pursuant to Section 382 of the Internal Revenue Code, and similar state provisions, as a result of changes in our ownership structure. The annual limitations may result in the expiration of net operating losses and credits prior to utilization. Furthermore, our utilization of the net operating loss carryforwards will not have value unless and until we achieve profitability.

Critical Accounting Policies

        Our discussion and analysis of our financial condition and results of operations are based on our financial statements, which have been prepared in accordance with accounting principles generally accepted in the United States, or GAAP. The preparation of these financial statements requires management to make estimates and judgments that affect the reported amounts of assets, liabilities and expenses and related disclosure of contingent assets and liabilities. On an ongoing basis, we evaluate these estimates, including those related to revenue recognition, long-lived assets, accrued liabilities, and income taxes. These estimates are based on historical experience and various other assumptions that we believe to be reasonable under the circumstances, the results of which form the basis for judgments about the carrying values of assets and liabilities. Actual results may differ from these estimates under different assumptions or conditions. While our significant accounting policies are described in more detail in Note 1 to our financial statements included in this prospectus, we believe the following accounting policies to be critical to the judgments and estimates used in the preparation of our financial statements:

    Revenue Recognition.

        Our revenue recognition policies are in accordance with the SEC Staff Accounting Bulletin, or SAB, No. 101, Revenue Recognition in Financial Statements , which provides guidance on revenue recognition in financial statements, and is based on the interpretations and practices developed by the SEC, and EITF Issue 00-21, Revenue Arrangements with Multiple Deliverables . Many of our collaboration agreements contain multiple elements, including research and development funding, milestone payments and royalty obligations. As of March 31, 2004, we have not recognized any revenue from royalties.

        Revenue from milestone achievement is recognized when earned, as evidenced by written acknowledgment from the collaborator or other persuasive evidence that the milestone has been achieved, provided that: (i) the milestone event is substantive and its achievability was not reasonably assured at the inception of the agreement, and (ii) our performance obligations after milestone achievement will continue to be funded by the collaborator at the comparable level to before the milestone achievement. If both of these criteria are not met, the milestone payment is recognized over the remaining minimum period of our performance obligations under the agreement. Amounts received for research funding are recognized as revenues as the services are performed as long as the amounts received are not refundable regardless of the results of the research project. To date, all milestone payments have been recognized when earned.

    Stock-based Compensation.

        As permitted by SFAS No. 123, Accounting for Stock-Based Compensation , we account for stock options granted to employees using the intrinsic value method in accordance with Accounting Principles Board, or APB, Opinion No. 25, Accounting for Stock Issued to Employees , and the Financial Accounting Standards Board, or FASB, Interpretation No. 44, Accounting for Certain Transactions

40


Involving Stock Compensation—An Interpretation of APB 25 . Pursuant to these guidelines, we measure the intrinsic value of the option or restricted stock award on its grant date as the difference between the purchase price of the restricted stock or the exercise price of employee stock options and the fair market value of our stock on the date of issuance or grant, and expense the difference, if any, over the vesting period of the option or restricted stock award.

        SFAS No. 123 requires stock-based compensation to be accounted for under the fair value method. If we adopted SFAS No. 123 to account for options granted to employees under our stock-based compensation plans, our loss would have been materially impacted. The impact of this method is disclosed in the notes to the financial statements later in this prospectus.

        Options or stock awards issued to non-employees are recorded at their fair value in accordance with SFAS No. 123, and periodically remeasured in accordance with EITF No. 96-18, Accounting for Equity Instruments That Are Issued to Other Than Employees for Acquiring or in Conjunction with Selling Goods or Services , and recognized over the related service period.

        The above listing is not intended to be a comprehensive list of all of our accounting policies. In many cases, the accounting treatment of a particular transaction is specifically dictated by GAAP. There are also areas in which our management's judgment in selecting any available alternative would not produce a materially different result. See our audited financial statements and notes thereto included elsewhere in this prospectus, which contain accounting policies and other disclosures required by GAAP.

Recently Issued Accounting Standards

        In November 2002, the Emerging Issues Task Force, or EITF, finalized its tentative consensus on EITF Issue 00-21, Revenue Arrangements with Multiple Deliverables , which provides guidance on the timing and method of revenue recognition for sales arrangements that include the delivery of more than one product or service. EITF 00-21 is effective prospectively for arrangements entered into in fiscal periods beginning after June 15, 2003. The adoption of this consensus had no material impact on our revenue recognition policies or our financial statements.

        In December 2002, the FASB issued SFAS No. 148, Accounting for Stock-Based Compensation—Transition and Disclosure . SFAS No. 148 is an amendment to SFAS No. 123 providing alternative methods of transition for a voluntary change to the fair value based method of accounting for stock-based employee compensation and also provides additional disclosures about the method of accounting for stock-based employee compensation. SFAS No. 148 is effective for financial statements for the Company beginning January 1, 2003. The Company has currently chosen not to adopt the voluntary change to the fair value based method of accounting for stock-based employee compensation. If the Company should choose to adopt such a method, its implementation pursuant to SFAS No. 148 could have a material effect on the Company's financial position and results of operations.

Quantitative and Qualitative Disclosures About Market Risk

        Our primary exposure to market risk is interest income sensitivity, which is affected by changes in the general level of United States interest rates. Due to the nature of our short-term investments, we believe that we are not subject to any material market risk exposure. We do not have any foreign currency or other derivative financial instruments.

41




BUSINESS

Overview

        We are a biotechnology company using proprietary taste receptor-based assays and screening technologies to discover and develop novel flavors and flavor enhancers for the packaged food and beverage industry. We believe our flavor ingredients will enable packaged food and beverage companies to improve the nutritional profile of their products and generate cost of goods savings, while maintaining or enhancing taste. We license our flavor ingredients to our collaborators on an exclusive basis, which we believe we will provide these companies with the ability to differentiate their products. We have entered into product discovery and development collaborations with four of the world's leading packaged food and beverage companies: Campbell Soup Company, The Coca-Cola Company, Kraft Foods Global, Inc. and Nestlé SA. We currently anticipate that we will derive all of our revenues from existing and future collaborations. Our existing collaboration agreements provide for research and development funding, milestone payments based upon our achievement of research or development goals and, in the event of commercialization, royalties on future sales of consumer products incorporating our flavors and flavor enhancers. Our current programs focus on the development of savory, sweet and salt flavors or flavor enhancers. In addition, future collaboration agreements may provide for up-front license fees.

        Flavors are substances that impart tastes or aromas in foods and beverages. Individuals experience the sensation of taste when flavors in food and beverage products interact with taste receptors in the mouth. A taste receptor functions either by physically binding to a flavor ingredient in a process analogous to the way a key fits into a lock or by acting as a channel to allow ions to flow directly into a taste cell. As a result of these interactions, signals are sent to the brain where a specific taste sensation is registered. There are currently five recognized primary senses of taste: umami, which is the savory taste of glutamate, sweet, salt, bitter and sour.

        We are currently pursuing savory, sweet and salt flavor and flavor enhancer discovery and development programs. The goals of our savory program are to enhance the taste of naturally occurring glutamate and enable the reduction or elimination of added MSG. The goals of our sweet program are to enhance the taste of natural and artificial sweeteners and enable a significant reduction in added sweeteners. The goals of our salt program are to enhance the taste of salt and enable a significant reduction in added salt.

Industry Background

        Packaged food and beverage products include carbonated and non-carbonated beverages, frozen foods, snack foods, ice cream, pasta, canned soup and numerous other products. According to Euromonitor International, an independent research organization, worldwide sales of packaged food and beverage products in 2003 were approximately $1.2 trillion, of which $227 billion was generated in the United States. Based on these estimates, of the worldwide total, sales of packaged foods were approximately $906 billion and sales of non-alcoholic beverages were approximately $278 billion. Based on data from Euromonitor, Information Resources, Inc. and our collaborators' 2003 annual reports, we estimate that our collaborators' combined worldwide sales in 2003 of their products that fall within their exclusive product fields were $31 billion. Our collaboration agreements provide that we will receive a royalty of 1% to 4% on our collaborators' sales of products containing our flavors or flavor enhancers. However, our collaborators may not incorporate our flavors and flavor enhancers into all of their products within their exclusive product fields.

        Each of our flavors and flavor enhancers addresses large, potentially overlapping markets. The following table sets forth the three primary taste areas on which we are focused and, for each taste

42



area, provides examples of product categories that could incorporate ingredients in those taste areas, estimated worldwide sales, growth rates in 2003 and our estimates of the worldwide sales for food and beverage products that fall within our existing collaborators' exclusive product fields.


Taste Areas


 

Example Product Categories


 

2003 Estimated
Worldwide Sales(1)


 

Estimated
Growth
Rate Over
2002(1)


 

2003 Estimated
Revenues
Of Existing
Collaborators
In Exclusive
Product Fields(2)

Savory   Ready meals, sauces, spreads, frozen foods, beverages, meal replacements, soups, pastas, dried foods, snack foods, processed meats, processed cheeses and cracker products   $ 368 billion   4.4 % $ 6.4 billion

Sweet

 

Confectionaries, cereal, ice cream, beverages and bakery products

 

$

383 billion

 

4.6

%

$

15.7 billion

Salt

 

Product categories are the same as those set forth for savory flavor area

 

$

368 billion

 

4.4

%

$

9.1 billion

 

 

 

 

 

 

 

 

 

 

 
(1)
According to Euromonitor.

(2)
Based on data from Euromonitor, Information Resources, Inc. and our collaborators' 2003 annual reports.

        Flavors and flavor enhancers are used in a wide variety of packaged food and beverage products throughout the world. Flavors are substances that impart tastes or aromas in foods or beverages. Flavor enhancers are substances that supplement, enhance or modify the original flavor or aroma of foods, without necessarily imparting noticeable flavors or aromas. Flavors and flavor enhancers can originate from either naturally occurring or chemically synthesized compounds.

        While some packaged food and beverage companies have their own internal research and development programs, most have traditionally relied on purchases of flavors and flavor enhancers from third parties. Historically, flavors and flavor enhancers have been sold on a commodity basis by independent manufacturers who make their products broadly available to packaged food and beverage companies on a non-exclusive basis. This has limited the ability of packaged food and beverage companies to use flavors and flavor enhancers to differentiate their brands from competitors.

        Traditionally, flavor companies have discovered new flavors and flavor enhancers primarily using inefficient, non-automated and labor-intensive trial and error processes involving a limited number of trained taste testers. Using this approach, taste testers must physically taste each potential flavor and flavor enhancer compound to assess the taste characteristics of the compound. Taste testers can assess only a limited number of potential flavors or flavor enhancers at one time due to the sensory fatigue that results from repeated tasting. As a result, only a small fraction of the available universe of compounds can be tested economically.

        In the United States, most flavors and flavor enhancers are regulated as GRAS substances under the provisions of the Federal Food, Drug and Cosmetic Act, or FD&C Act. GRAS determinations for most new flavors and flavor enhancers are made by an independent panel of scientists administered by FEMA. Under the FEMA GRAS process we expect that for each of our flavors and flavor enhancers it will take 12 to 18 months and cost less than $1 million to conduct the safety studies and complete the review by the FEMA expert panel. Once a flavor or flavor enhancer is determined to be FEMA GRAS,

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it may be immediately incorporated into products for test marketing and commercialization in the United States and in seven other countries.

        The packaged food and beverage industry is comprised of a number of large and highly competitive market segments. Small market share gains in specific large market segments can translate into significant additional revenue for packaged food and beverage companies. For example, according to Euromonitor, estimated 2003 worldwide sales of soft drinks are approximately $238.0 billion. Thus, an increase of a tenth of a percentage point in overall worldwide market share would result in additional revenue of approximately $238.0 million.

        As a result of these market opportunities, packaged food and beverage companies are constantly seeking ways to differentiate their products, demand for which can be greatly affected by very small actual or perceived improvements in flavor or health profiles. Flavors and flavor enhancers can potentially provide an important way to differentiate a particular product through enhanced taste, health benefits, flavor ingredient exclusivity and cost of goods savings.

Our Solution

        We use our proprietary taste receptor-based assays and screening technologies to discover and develop novel flavors and flavor enhancers. We have developed proprietary taste receptor-based assays that incorporate human taste receptors. We use these assays in our high-throughput screening systems to rapidly and efficiently screen our compound libraries and identify large numbers of novel potential

44



flavors and flavor enhancers. We believe our approach improves the likelihood that compounds with the desired characteristics can be discovered and then optimized into novel flavors and flavor enhancers.

        We believe our approach will result in the discovery and development of flavors and flavor enhancers that will provide the following valuable solutions to the following key challenges faced by the packaged food and beverage industry:

Our Strategy

        Our goal is to become the leader in discovering, developing and commercializing new and improved flavors and flavor enhancers. Key elements of our strategy include:

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Our Product Development Process

        The following diagram summarizes our product development process and the estimated timing, based on our experiences to date and discussions with our collaborators, of each step in the process.

CHART

        The key elements of our product development process are:

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        Following a FEMA GRAS determination, foods and beverages containing our proprietary flavors and flavor enhancers can be immediately commercialized in the United States. We anticipate, however, that our collaborators will test market their products containing our flavors and flavor enhancers through a series of consumer acceptance tests over a period of 6 to 12 months prior to initiating any wide-scale commercialization.

Our Flavor and Flavor Enhancer Programs

        We are currently pursuing the discovery and development of flavors and flavor enhancers through programs focused on savory, sweet and salt. The following diagram indicates the principal compounds we are developing in each program, and the current status of each compound.

CHART

        Using SavoryScreenHT, our high-throughput savory receptor-based assay system, we have identified two product candidates, S336 and S807, that enhance the savory taste of glutamate. We believe that these product candidates will enhance the taste of naturally occurring glutamate or enable the reduction or elimination of added MSG and inosine monophosphate, or IMP, an expensive savory enhancer of MSG taste, in a variety of foods and savory beverages, while maintaining or improving the desired savory taste.

        To demonstrate the taste properties of S336 and S807, we tested each compound against a reference sample consisting of MSG and IMP in amounts typically used in foods to impart a savory taste. We tasted this reference sample against test samples containing MSG and either S336 or S807 at concentrations of the test compound of up to 3 parts per million, or ppm, which is typical of the concentrations of FEMA GRAS flavors and flavor enhancers.

        In these tests, S336 enhanced the savory taste of MSG and, at the level used, was significantly more potent than IMP in the reference sample. In a separate test, a solution of S336 alone, in the absence of MSG and IMP, was found to be more savory than the reference sample. Based on these

47



results, we believe that the use of S336 may allow for a significant reduction or replacement of added MSG and IMP in savory foods. In separate tests, S807 also enhanced the savory taste of MSG and provided for a three-fold reduction in MSG levels, yet maintained the same savory taste of the reference sample. S336 and S807 have also each been shown to enhance the savory taste of MSG in a product prototype.

        Our collaborator has evaluated S336 and S807 for savory taste enhancement in product prototypes. S336 is approximately two times more potent than S807 in taste tests and exhibits greater water solubility compared to S807. Our collaborator is testing whether such solubility differences are important for savory enhancers in different types of savory packaged food products. Other characteristics, such as heat stability, are similar for the two compounds. Based on the results of such studies, our collaborator has formally selected both S336 and S807 for development and commencement of safety studies.

        We contracted for preliminary safety assessments to be performed on the structures of S336 and S807. Based on published safety data on compounds with related structures and the preliminary assessments, we believe that the use of either S336 or S807 in foods at a low concentration is unlikely to be associated with adverse effects in humans. We will further confirm the safety of these compounds through metabolism and 90-day sub-chronic safety studies in rodents according to FDA guidelines. We expect to initiate these safety studies in the second half of 2004. It is anticipated that the safety studies will be completed and a FEMA GRAS determination will be obtained by the end of the second quarter of 2005. As the safety studies undertaken to support a FEMA GRAS determination have not yet been completed, our conclusions regarding safety are necessarily preliminary and could be contradicted in the future.

        Using SweetScreenHT, our high-throughput sweet receptor-based assay system, we have identified S395 and S888, proof-of-concept compounds that enhance the sweet taste of sugar. We believe that the flavors and flavor enhancers we are developing in our sweet enhancer program will enhance the sweet taste of natural and artificial sweeteners used in a variety of packaged food and beverage products and may provide for a significant reduction in added sweetener in the finished product while maintaining or improving the desired sweet taste.

        To evaluate their taste effects, we tested the ability of S395 and S888 to enhance the sweet taste of sucrose sugar solutions in a series of taste tests. In the first series of tests, we tested 4% sucrose solutions, to which we separately added S395 and S888 at concentrations of 10 ppm and 3 ppm, respectively, against reference solutions of 4%, 6% and 8% sucrose.

        In these tests, both S395 and S888 enhanced the taste of a 4% sucrose solution such that it tasted sweeter than a 6% sucrose solution but less sweet than an 8% sucrose solution. In other tests, both S395 and S888 were found to enhance a mixture of fructose and glucose, typical of products sweetened using high fructose corn syrup.

        We are currently optimizing the enhancement activity and potency of S395 and S888 in order to achieve the same enhancing effects, but at less than 3 ppm. Using the structures of S395 and S888 as a guide, we will first create derivatives of S395 and S888 and then test them in the SweetScreenHT system. Optimized lead compounds with improved enhancement and/or potency will be subjected to taste tests. We plan to test the improved lead compounds in a variety of prototype products containing either natural or artificial sweeteners.

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        Using SaltScreenHT, our high-throughput salt receptor-based assay, we have identified hundreds of compounds that enhance the activity of a taste receptor believed to be involved in the taste of salt. The goal of our salt enhancer program is to identify compounds that enhance the taste of salt and provides a significant reduction in sodium levels in a variety of foods while maintaining or improving the desired salt taste.

        We tested the most potent of the compounds identified by SaltScreenHT with our electrophysiology-based assay SaltScreenEP. This assay identifies compounds that specifically enhance the activity of ENaC, a taste receptor believed to be involved in the taste of salt. Based on our results, we selected compound S853 for further optimization.

        During 2003, we synthesized and tested over 1,000 derivatives of S853 in the SaltScreenEP system. The most potent compound, S969, is approximately 1,000-fold more potent than the original compound, S853. Our goal is to improve potency another 10-fold to 100-fold. We believe we will need to synthesize additional compounds to reach this goal and identify a taste proof-of-concept compound.

Product Discovery and Development Collaborations

        We pursue collaborations with leaders in the packaged food and beverage market. Under each of our current product discovery and development collaboration agreements, we have agreed to conduct research and develop flavors and flavor enhancers in one or more specified taste areas, such as savory, sweet or salt. Each of these collaborations is focused on one or more specific product fields, such as non-alcoholic beverages, wet soups, or frozen foods. To date, we have entered into product discovery and development collaborations with Campbell Soup, Coca-Cola, Kraft Foods and Nestlé.

        All of our current collaboration agreements provide for research and development funding, milestone payments upon achievement of pre-defined research or development targets and royalty payments based upon future product sales in the event the collaborator commercializes a product incorporating our flavors or flavor enhancers. The research and development funding under each of these agreements is paid according to a fixed payment schedule. Each of these collaborations provides us with a portion of the funding we require to pursue the discovery and development of flavors and flavor enhancers for the applicable program. Under each of these agreements, we are primarily responsible for the discovery, development and regulatory approval phases and any associated expenses, while our applicable collaborator is responsible for selecting the consumer products that may incorporate our flavors or flavor enhancers. Our collaborator is also responsible for manufacturing, marketing, selling and distributing any of these consumer products, and any associated expenses. We believe our collaborations will allow us to benefit from our collaborators' well-established brand recognition, global market presence, established sales and distribution channels and other industry-specific expertise. Each of our collaborations is governed by a joint steering committee, consisting of an equal number of representatives of the collaborator and us. The steering committees provide strategic direction and establish performance criteria for the research, development and commercialization of our flavors and flavor enhancers. All decisions of the steering committees must be unanimous.

        Each of our collaboration agreements provides that we will conduct research and development on flavors and flavor enhancers for use within clearly defined packaged food and beverage product fields on an exclusive basis for the collaborator during the collaborative period specified in each of the agreements. Our current product discovery and development collaborators are not prohibited from entering into research and development collaboration agreements with third parties in any product field. Under the terms of each agreement, we will retain rights to flavors and flavor enhancers that we discover during the collaboration for use with the collaborator, or for our use or with other collaborators outside of the defined product field. We will also retain rights to any flavors and flavor enhancers that we discover after the respective collaborative period. In addition, if the collaborator

49



terminates the agreement or fails after a reasonable time following regulatory approval or GRAS determination to incorporate one or more of our flavors or flavor enhancers into a product, it will no longer be entitled to use, and we will have the right to license, the flavors or flavor enhancers to other packaged food and beverage companies for use in any product field.

        Each of our agreements terminates when we are no longer entitled to royalty payments under the agreement. In addition, each agreement may be terminated earlier by mutual agreement or by either party in the event of a breach by the other party of its obligations under the agreement. Kraft Foods and Nestlé may each terminate their respective agreement without cause upon 60 days written notice, provided that it pay a specified termination fee if it terminates the agreement prior to the end of the research collaborative period. Campbell Soup may only terminate its agreement without cause on or after March 28, 2005 upon 60 days written notice, provided that it pay a specified termination fee if it terminates the agreement after March 28, 2005 but prior to the end of the collaborative period. Our agreement with Coca-Cola permits Coca-Cola to terminate the agreement upon specified major corporate events.

        In March 2001, we entered into a collaboration agreement with Campbell Soup, a global manufacturer and marketer of consumer food products, to work for a three-year collaborative period to discover specified flavors and flavor enhancers in the packaged food and beverage product fields of soups, including frozen soups. We later amended the agreement to add the product field of specified savory beverages in consideration for additional research and development payments and potential milestone and royalty payments. We also extended the collaborative period until the earlier of March 2006 or a GRAS determination, subject to earlier termination under specified circumstances.

        Under the terms of the collaboration, Campbell Soup has agreed to pay to us certain research and development funding. We are also eligible to receive a milestone payment upon our achievement of a specific product development goal. To date, we have received $6.7 million in research and development funding. If all milestones are achieved, and including all research and development funding paid or payable, we may be entitled to payments which total up to $10.1 million. In addition, in the event of commercialization, we are entitled to receive royalties on future net sales of products containing a discovered flavor or flavor enhancer from the date of introduction of each product in each country until 17 years thereafter or until the expiration of relevant patents in such country, whichever is earlier. We cannot assure you that we will receive any future milestone payments or royalties under this collaboration.

        In April 2002, we entered into a collaboration agreement with Coca-Cola, the world's largest beverage company, to work for a three-year collaborative period with Coca-Cola for the discovery and development of specified new flavors and flavor enhancers in the product field of soft drinks and other non-alcoholic beverages. In addition, we will work with Coca-Cola on a co-exclusive basis with Kraft Foods for the discovery and development of flavor enhancers in a specified food and beverage product field. In April 2004, we amended the agreement to extend the collaborative period until April 2008.

        Under the agreement, Coca-Cola has agreed to pay certain research and development funding over the collaborative period. We are also eligible to receive milestone payments upon our achievement of specific product discovery and development goals. To date, we have received $4.0 million in research and development funding. If all milestones are achieved, and including all research and development funding paid or payable, we may be entitled to payments which total up to $14.8 million. In addition, in the event of commercialization, we are entitled to receive royalties on future sales of products containing a discovered flavor or flavor enhancer until the expiration of relevant patents. We cannot

50



assure you that we will receive any future milestone payments or royalties under this collaboration. The collaborative period is subject to early conclusion by Coca-Cola upon 60 days written notice upon payment of a specified early conclusion fee, provided that Coca-Cola may terminate the collaborative period without payment of an early conclusion fee in the event that we fail to achieve a specified research and development goal by April 22, 2006, subject to payment of research funding through July 22, 2006. In the event of early conclusion, Coca-Cola will no longer be entitled to use, and we will have the right to license, any flavors or flavor enhancers discovered prior to such early conclusion to third parties for use in any product field, provided that Coca-Cola would retain non-exclusive rights in the field of non-alcoholic beverages with the exception of dry powdered beverages.

        In December 2000, we entered into a collaboration agreement with Kraft Foods, a global leader in branded foods and beverages. The collaborative period for the original product discovery and development program expired on its own terms in December 2003. However, prior to December 2003 we amended our collaboration agreement to provide for a new collaborative program through May 2005. Under this program, we will work with Kraft Foods for the discovery and development of flavor enhancers, on a co-exclusive basis with Coca-Cola in a specified food and beverage product field.

        Under the collaboration agreement, as amended, Kraft Foods has agreed to pay us certain research and development funding over a 4.5-year collaborative period. We are also eligible to receive milestone payments upon our achievement of specific product discovery and development goals. To date, we have received $6.4 million in research and development funding and one milestone payment of $375,000. If all milestones are achieved, and including all research and development funding paid or payable, we may be entitled to payments which total up to $8.6 million. In addition, in the event of commercialization, we are entitled to receive royalties on future net sales of products containing a discovered flavor or flavor enhancer from the date of introduction of each product in each country until the earlier of 17 years thereafter or until the expiration of relevant patents in such country. We cannot assure you that we will receive any further milestone payments or royalties under this collaboration.

        In April 2002, we entered into a collaboration agreement with Nestlé, the world's largest food company, to work for a three-year collaborative period to discover specified flavors and flavor enhancers in the food and beverage product fields of dehydrated and culinary food, frozen food and wet soup.

        Under the terms of the collaboration agreement, Nestlé has agreed to pay to us certain research and development funding over three years. We are also eligible to receive milestone payments upon our achievement by certain dates of specific product discovery and development goals. To date, we have received $5.2 million in research and development funding and three milestone payments of $375,000 each. If all milestones are achieved, and including all research and development funding paid or payable, we may be entitled to payments which total up to $9.6 million. In addition, in the event of commercialization, we are entitled to receive royalties on future net sales of products containing a discovered flavor or flavor enhancer from the date of introduction of each product in each country until the expiration of relevant patents. We cannot assure you that we will receive any further milestone payments or royalties under this collaboration.

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Our Technology

        We have discovered or in-licensed many of the key receptors that mediate taste in mammals. Having isolated human taste receptors, we have created proprietary taste receptor-based assay systems that provide a biochemical or electronic readout when a test compound affects the receptor. To enable faster compound discovery, we integrated our proprietary taste receptor-based screening assays into a robot-controlled automated system that uses plates containing an array of individual fluid wells, each of which can screen a different compound. Our receptor-based discovery and development process has enabled us to improve our ability to find novel flavors and flavor enhancers over the traditional use of simple taste tests. We have synthesized and discovered hundreds of unique potential flavors and flavor enhancers.

        There are currently five recognized primary senses of taste: umami, which is the savory taste of glutamate, sweet, salt, bitter and sour. Scientists generally believe that each taste sensation is recognized by a distinct taste receptor or family of taste receptors in the mouth or on the tongue. A taste receptor functions either by physically binding to a flavor ingredient in a process analogous to the way a key fits into a lock or by acting as a channel to allow ions to flow directly into a taste cell. The brain recognizes tastes by determining which of the numerous receptors in the mouth have been contacted by a given flavor ingredient. Savory, sweet and bitter taste compounds bind to taste receptors specific to each taste on the surface of taste bud cells. In contrast, the taste of salt and the sour taste are thought to be recognized by taste channels that allow the passage of particular ions into the taste bud cells.

        We have developed proprietary taste receptor-based assay systems using the following human taste receptors:

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        We have developed or acquired access to expansive libraries of potential flavors and flavor enhancers currently comprised of over 180,000 natural and synthetic compounds. In addition, we intend to acquire or develop additional compounds to add to our libraries. We have designed and selected our libraries to comprise compounds that we believe are likely to be safe and economical for use in packaged food and beverage products. We are using our SavoryScreenHT, SweetScreenHT, SaltScreenHT and SaltScreenEP assay systems to screen the compounds in our libraries for their effects on specific taste receptors. These systems use many of the same technologies that pharmaceutical companies use to discover medicines. We also use these systems to assist us in optimizing our lead compounds by rapidly and iteratively testing the potency of the flavors and flavor enhancers generated in the optimization process as the lead compound progresses to become a product candidate.

Regulatory Process

        Flavor compounds, including flavor enhancers, intended for use in foods in the United States are regulated under provisions of the FD&C Act administered by the FDA. Flavor compounds sold in countries and regions outside of the United States are also subject to regulations imposed by national governments or regional regulatory authorities as is the case in the European Union.

        In the United States, the majority of flavor compounds are regulated by the FDA as approved food additives, or as GRAS ingredients under the FD&C Act. The Food Additive Amendments of 1958 prompted the flavor industry to establish the Flavor and Extract Manufacturers Association, or FEMA, which has administered the GRAS program for flavors on behalf of the industry. Another possible route to approval of a flavoring compound would be a food additive petition to the FDA, however, few flavors are currently approved via this route. We believe that the flavor compounds, including flavor enhancers, we may discover will be subject to the FEMA GRAS review process as described below.

        GRAS Review Process.     Flavor compounds that qualify for the GRAS review process are generally intended to be consumed in small quantities and have data supporting their safety under conditions of intended use. An expert panel, convened to undertake a GRAS review, determines whether a compound is generally recognized as safe under the conditions of its intended use. These experts are qualified by scientific training and experience to evaluate the safety of chemicals used in food and may declare certain compounds as having been adequately shown through scientific procedures to be generally recognized as safe under the conditions of their intended use. Under the GRAS process, manufacturers are required to obtain safety data from the scientific literature or through the conduct of safety studies, determine the estimated daily intake of the flavor compound per person and submit a report to the GRAS review panel describing the physical, chemical, safety, and metabolic properties of the flavor compound. The entire GRAS determination process, including the safety and metabolic studies, application preparation and GRAS panel review, can take up to two years or longer. However, if there are prior safety data on the compound or a compound with a related structure, then fewer safety studies may be required for the GRAS review and the GRAS review process may be considerably faster than two years.

        The most common types of GRAS review are:

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        The Food Additive Petition Process.     Food ingredients that are not GRAS may be considered food additives. Food additives require FDA approval prior to use in foods. A compound may be ineligible for FEMA GRAS determination, and may be considered a food additive, for a variety of reasons, including conditions of intended use resulting in high dietary exposure, use for purposes other than a flavor or flavor enhancer and the compound's safety profile. If the compound is considered a food additive, a food additive petition must be filed and approved by the FDA. Examples of compounds that have gone through a food additive petition include the artificial sweeteners Aspartame, Acesulfame K, and Sucralose, and the fat substitute Olestra. The food additive petition approval process for such food ingredients can take eight years or more. In the event that a particular flavor or flavor enhancer is not eligible for FEMA GRAS determination and therefore requires FDA approval prior to use, we will dedicate our development efforts to alternative compounds.

        There are three key benefits of the FEMA GRAS review process:

License Arrangements

        We have licensed rights from several companies and academic institutions, including the following:

        In March 2000, we entered into a license agreement with the University of California under which we obtained exclusive rights to certain technologies held by the University of California that are involved in the biology of taste, including specified receptors in two taste receptor families, T1Rs and T2Rs. The license may be converted to a non-exclusive license, or terminated, by the University of

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California if we fail to meet specified milestones relating to the discovery of specified products and the sale of specified products and services. Our exclusive rights are also subject to rights granted by the University of California to the United States Government and a private medical foundation. The agreement calls for the payment of a license issue fee, payable in installments through 2005, annual maintenance fees commencing in 2006 and royalties or service revenues on sales of any products developed using technologies licensed under the agreement. Royalties will accrue in each country for as long as there exists a valid patent claim covering a product developed under the agreement. No royalty payments have accrued under the agreement to date. The agreement will remain in effect until the later of the expiration of the last to expire patent licensed under the agreement, or ten years from the date that the last product to be developed under the agreement is introduced to market in the United States. We may terminate the agreement at any time, without cause, upon notice to the University of California. The University of California may terminate the agreement upon a breach of our obligations under the agreement. In addition, we are in discussions with the University of California to amend the license agreement to include additional related technology related to the coexpression of T1R taste receptors.

        In November 2000, we entered into a technology collaboration and license agreement with Aurora to develop certain assay technologies, which was amended April 2002. Under the collaboration, we developed high-throughput screening assays using Aurora's proprietary screening technologies. The agreement terminated in October 2002 and Invitrogen Corporation subsequently acquired certain surviving rights and obligations under this agreement. Under the surviving terms of the agreement, we maintain exclusive rights to use certain proprietary screening technologies with our taste receptor targets for the discovery of flavors and flavor enhancers. These exclusive rights are subject to rights granted under other current and future license agreements in connection with the purchase of certain screening systems, as well as Invitrogen's right to grant licenses under its proprietary technology to academic, government and other non-profit organizations. Our rights with respect to the screening of flavors and flavor enhancers are fully paid-up and will remain in effect, except in the event that we breach any remaining obligations to Invitrogen under the agreement. In November 2000, Aurora purchased 1,000,000 shares of our Series C preferred stock for $4.8 million.

Competition

        Our goal is to be the leader in discovering flavors and flavor enhancers for use in a wide range of packaged food and beverage products. Other companies are possibly pursuing similar technologies and the commercialization of products and services relevant to flavors and flavor enhancers. Although we are not aware of any other companies that have the scope of proprietary technologies and processes that we have developed in our field, there are a number of competitors who possess capabilities relevant to the flavor and flavor enhancer field.

        In particular, we face substantial competition from companies pursuing the commercialization of products and services relevant to taste using more traditional methods for the discovery of flavors and flavor enhancers. These competitors include leading flavor companies, such as International Flavors & Fragrances Inc., Givaudan SA, Symrise, Quest International and Firmenich. These companies provide flavors and other products, such as oils, extracts and distillates, to consumer products companies for use in a wide variety of products including foods, beverages, confectionaries, dairy products and pharmaceuticals. We also face indirect competition from other companies such as Newly Weds Foods, Inc., a manufacturer of food coatings and seasonings for restaurants, airlines and the food services industry. We currently compete and will continue to compete in the future with these companies in collaborating with and selling flavor products and technologies to manufacturers of packaged food and beverage products. Many of these companies have substantially greater capital

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resources, research and development resources and experience, manufacturing capabilities, regulatory expertise, sales and marketing resources, established relationships with consumer products companies and production facilities.

        We may in the future face competition from life sciences and other technology companies and other commercial enterprises. These entities engage as we do in biotechnology, biology or chemistry and could apply this technology to the discovery and development of flavors and flavor enhancers. We are aware of another company, Linguagen Corp., a privately-held company, that we believe is involved in research on sweetness potentiators, salt substitutes and bitter blockers, specifically adenosine 5' monophosphate, or AMP, and has announced research and development collaborations with The Solae Company and Perrigo Company in the field of flavor discovery and modification. While we do not believe that either of these collaborations is competitive with our product discovery and development efforts, we cannot guarantee that products developed as a result of our competitors' existing or future collaborations will not compete with our flavors and flavor enhancers.

        Universities and public and private research institutions are also potential competitors. While these organizations primarily have educational objectives, they may develop proprietary technologies related to the sense of taste or secure patent protection that we may need for the development of our technologies and products. We may attempt to license these proprietary technologies, but these licenses may not be available to us on acceptable terms, if at all.

        We are not aware of any sweet or salt enhancer that is commercially available or in development other than those we have discovered and are developing. Although savory flavor enhancers, such as IMP, are commercially available, they are not very potent, are expensive, are not patent protected and are sold as a commodity. However, our competitors, either alone or with their collaborative partners, may succeed in developing technologies or discovering flavors and flavor enhancers that are similar or preferable in the areas of, among others, effectiveness, safety, cost and ease of commercialization, and our competitors may obtain intellectual property protection or commercialize such products sooner than we do. Developments by others may render our product candidates or our technologies obsolete. In addition, our current product discovery and development collaborators are not prohibited from entering into research and development agreements with third parties in any particular field.

Patents and Proprietary Rights

        We will be able to protect our proprietary rights from unauthorized use by third parties only to the extent that our proprietary rights are described by valid and enforceable patents or are effectively maintained as trade secrets. Accordingly, we are pursuing and will continue to pursue patent protection for our proprietary technologies. As of March 31, 2004 we had 38 pending United States patent applications and 60 pending foreign applications covering various aspects of our proprietary technology. In addition, we have exclusive license agreements with Johns Hopkins University, The University of California, Incyte Corporation and Aurora covering an additional 28 issued United States patents, 17 pending United States patent applications, 20 issued foreign patents and 56 pending foreign applications.

        Our policy is to file patent applications and to protect technologies, inventions and improvements to inventions that are commercially important to the development of our business. For example, we may seek patent protection for receptors and nucleic acid sequences encoding receptors that are involved in taste and the use of such receptors to identify ingredients that modulate taste. We also rely on trademarks to protect our proprietary technology. Generally, United States patents have a term of 17 years from the date of issue or 20 years from the earliest claimed priority date, whichever is later, for patents issued from applications filed with the United States Patent and Trademark Office prior to June 8, 1995 or 20 years from the application filing date or earlier claimed priority date in the case of patents issued from applications filed on or after June 8, 1995. Patents in most other countries have a

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term of 20 years from the date of filing the patent application. Our success depends significantly upon our ability to develop ingredients and technologies that are protected by our intellectual property and that do not infringe any competitor patents. We intend to continue to file patent applications as we discover and develop new flavors or flavor enhancers and technologies.

        Seeking and obtaining patents may provide some degree of protection for our intellectual property. However, our patent positions are highly uncertain and may involve complex legal and factual questions. No consistent standard regarding the allowability and enforceability of claims in many of the pending patent applications has emerged to date. As a result, we cannot predict the breadth of claims that will ultimately be allowed in our patent applications, if any, including those we in-licensed or how we may be able to enforce our patent claims against our competitors. In addition, we may not have been the first to file patent applications for or to invent inventions relating to the technologies upon which we rely, which would preclude us from obtaining issued patents on the relevant inventions. We are aware of other companies and academic institutions which have been performing research and have applied for patents in the area of mammalian taste. In particular, other companies and academic institutions have announced that they have identified taste receptors, published data on taste receptor sequence information or have filed patent applications on receptors and their use, including the University of California, Linguagen, Monell Chemical Senses, Mount Sinai School of Medicine, Scripps Research Institute and Warner Lambert. If any of these companies or academic institutions are successful in obtaining broad patent claims, such patents could potentially block our ability to use various aspects of our discovery and development process and might prevent us from developing or commercializing newly discovered flavors or flavor enhancers or otherwise conducting our business.

        We also rely in part on trade secret protection for our confidential and proprietary information and process. Our policy is to execute confidentiality agreements with our employees and consultants upon the commencement of an employment or consulting relationship. These agreements generally require that all confidential information developed by the individual or made known to the individual by us during the course of their employment shall be our exclusive property. However, there can be no assurance that we will be able to effectively enforce these agreements or that the subject proprietary information will not be disclosed.

        We are not a party to any litigation, opposition, interference, or other potentially adverse ex parte or inter-party governmental or non-governmental proceeding with regard to our patent and trademark positions. However, if we become involved in litigation, interference proceedings, oppositions or other intellectual property proceedings, for example as a result of an alleged infringement, or a third-party alleging an earlier date of invention, we may have to spend significant amounts of money and time and, in the event of an adverse ruling, we could be subject to liability for damages, invalidation of our intellectual property and injunctive relief that could prevent us from using technologies or developing products, any of which could have a significant adverse effect on our business financial condition and results of operation. In addition, any claims relating to the infringement of third-party proprietary rights, or earlier date of invention, even if not meritorious, could result in costly litigation, lengthy governmental proceedings, divert management's attention and resources and require us to enter royalty or license agreements which are not advantageous if available at all.

Sales and Marketing

        We do not currently intend to establish internal sales and marketing capabilities. Under our current collaboration agreements, our collaborators are responsible for sales, marketing, and distribution of any packaged food or beverage product incorporating our flavors and flavor enhancers. As a result, we expect to commercialize our flavors and flavor enhancers without incurring significant sales, marketing and distribution costs. Our four current collaborators, Campbell Soup, Coca-Cola, Kraft Foods and Nestlé, are recognized leaders in the sales, marketing, and distribution of packaged food and beverage products.

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Manufacturing

        We intend to utilize third parties to manufacture our flavors and flavor enhancers. Under two of our existing product discovery and development collaborations, our collaborator may, in its sole discretion, manufacture itself or through a third party manufacturer the flavors or flavor enhancers it licenses from us. The remaining two agreements require the collaborator to identify with us a mutually agreed upon third party to manufacture the flavors or flavor enhancers it licenses from us. In all of these agreements, we maintain either the first right of negotiation or an option to manufacture based on provisions within the agreement.

        There are a number of reliable third party contract manufacturers available to produce our flavors and flavor enhancers. Our current product candidates are relatively simple structures making them easy and inexpensive to produce. We do not anticipate any capacity issues because of our low volume requirements and the number of reliable and available manufacturers.

Employees

        As of March 31, 2004, we had 73 full-time employees, including 25 with Ph.D. degrees. Of our full-time workforce, 54 employees are engaged in research and development and 19 are engaged in business development, finance and administration. We also retain outside consultants. None of our employees are covered by collective bargaining arrangements, and our management considers its relationships with our employees to be good. We have entered into employment letter agreements with Kent Snyder, Mark Zoller, Ph.D., Harry Leonhardt, Esq., John Poyhonen and Klaus Gubernator, Ph.D., the terms of which are included in this prospectus under the heading "Management—Employment Agreements."

Facilities

        We currently lease 86,962 square feet of laboratory and office space at 11099 North Torrey Pines Road, La Jolla, California 92037. Of this leased space, as of April 15, 2004 we subleased approximately 25,157 square feet to other companies. Our lease for this facility expires on December 31, 2006, with an option to renew for an additional period of five years. Our current monthly lease obligations for rent are approximately $246,000, which includes space that has been sublet to other companies. In addition, we are responsible for expenses associated with the use and maintenance of the building, such as utilities and common area maintenance. These costs vary each month, and historically have been approximately $124,000 per month. We believe that our existing facilities are adequate to meet our business requirements for the near-term and that additional space will be available on commercially reasonable terms, if required.

Legal Proceedings

        We are not a party to any material legal proceedings at this time.

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MANAGEMENT

Executive Officers, Directors and Key Employees

        The following table sets forth information regarding our executive officers, directors and key employees:

Name

  Age
  Position
Kent Snyder   50   President, Chief Executive Officer and Director
Mark J. Zoller, Ph.D.   50   Chief Scientific Officer and Sr. Vice President, Research
Harry J. Leonhardt, Esq.   48   Vice President, General Counsel and Corporate Secretary
John Poyhonen   44   Vice President and Chief Financial and Business Officer
Klaus Gubernator, Ph.D.   50   Vice President, Development
Nigel R.A. Beeley, Ph.D.   53   Vice President, Discovery
Mark Leschly   35   Chairman of the Board
Lori Robson, Ph.D.   44   Director
David Schnell, M.D.   43   Director
Jay M. Short, Ph.D.   46   Director
Timothy Wollaeger   60   Director

Executive Officers

         Kent Snyder , President and Chief Executive Officer, joined us in June 2003 and has served as a member of our board of directors since that time. Prior to joining us, from October 2001 to June 2003, Mr. Snyder was retired. From July 1991 to October 2001, Mr. Snyder held various marketing and sales management positions with Agouron Pharmaceuticals, Inc., a Pfizer company. Mr. Snyder was President of Global Commercial Operations at Agouron. Prior to holding the position of President of Global Commercial operations, Mr. Snyder served as Senior Vice President of Commercial Affairs and Vice President of Business Development. Mr. Snyder received his B.S. from the University of Kansas and his M.B.A. from Rockhurst College.

         Mark J. Zoller, Ph.D. , joined us in March 2000 as Vice President of Research and was promoted to Senior Vice President of Research and Chief Scientific Officer in June 2001, which position he still holds. From May 1992 to December 1999, Dr. Zoller held a number of scientific management positions at ARIAD Pharmaceuticals, most recently as Senior Vice President, Genomics and Scientific Director of the Hoechst-ARIAD Genomics Center, which in December 1999 was acquired by Aventis Pharmaceuticals. Dr. Zoller received his B.A. in Chemistry from Pomona College and his Ph.D. in Chemistry from the University of California, San Diego.

         Harry J. Leonhardt, Esq. , Vice President, General Counsel and Corporate Secretary, joined us in September 2003. From February 2001 to February 2003, Mr. Leonhardt served as Executive Vice President of Business Development, General Counsel and Corporate Secretary of Genoptix, Inc. From July 1996 to November 2000, Mr. Leonhardt held senior management positions with Nanogen, Inc. and served most recently as Senior Vice President, General Counsel and Secretary. Mr. Leonhardt received his B.S. degree from the University of the Sciences in Philadelphia and his Juris Doctorate from the University of Southern California Law Center.

         John Poyhonen , Vice President and Chief Financial and Business Officer, joined us in October 2003 as Vice President and Chief Business Officer and was promoted in April 2004 to Vice President and Chief Financial and Business Officer. From 1996 until October 2003, Mr. Poyhonen served in various sales and marketing positions for Agouron Pharmaceuticals, a Pfizer company, most recently as Vice President of National Sales. Prior to holding this position, Mr. Poyhonen served as Vice President of Marketing and Vice President of National Accounts. Mr. Poyhonen received his B.A. in Marketing from Michigan State University and his M.B.A. from the University of Kansas.

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Directors

         Mark Leschly has served as a member of our board of directors since November 2001 and as our Chairman since December 2002. Since July 1999, Mr. Leschly has been a Managing Partner with Rho Capital Partners, an investment and venture capital management company. Starting in July 1994 to July 1999, Mr. Leschly was an associate and then a General Partner of HealthCare Ventures, L.L.C., a venture capital management company. From September 1991 to June 1993, Mr. Leschly served as a consultant for McKinsey & Co., a management consulting company. Mr. Leschly received his B.A. from Harvard University and his M.B.A. from Stanford Graduate School of Business. In addition to being a director of Diversa Corporation, NitroMed, Inc. and Tercica, Inc., Mr. Leschly is a director of a number of private companies.

         Lori Robson, Ph.D. has served as a member of our board of directors since December 1999. In 1997, Dr. Robson joined Bay City Capital where she currently serves as Principal and Chief Investment Officer of the firm's North American Nutrition and Agribusiness Fund. Dr. Robson received her Ph.D. in Bacteriology from the University of Wisconsin at Madison and held an NIH post-doctoral fellowship at The Johns Hopkins University School of Medicine. She received her M.B.A. from the University of California Berkeley Haas School of Business. Dr. Robson serves as a director of Amerifit Nutrition, Inc. and VNUS Medical Technologies.

         David Schnell, M.D. has served as a member of our board of directors since December 1999. In 1997, Dr. Schnell co-founded and currently serves as a Managing Director of Prospect Venture Partners and Prospect Venture Partners II, venture capital funds dedicated to investing in biomedical and health care companies. Dr. Schnell received his M.D. from Harvard Medical School, his M.A. in health services research from Stanford University School of Medicine, and his B.S. in biological sciences from Stanford University. Dr. Schnell is a director of a number of private companies.

         Jay M. Short, Ph.D. has served as a member of our board of directors since March 2004. Dr. Short is the President and CEO of Diversa Corporation, a leader in applying proprietary genomic technologies for the rapid discovery and optimization of novel products from genes and gene pathways. He is a founding member of Diversa Corporation, has served as Chief Technology Officer and Director of the company since its inception in 1994. Dr. Short is a Director for Invitrogen, a leading biotechnology company in the area of gene expression and Stressgen Biotechnologies, focusing on the medical application of stress proteins. He previously served as Head of Research and Operations of Strategene Cloning Systems and President of their subsidiaries. Dr. Short received his Ph.D. in Biochemistry from Case Western Reserve University in Cleveland, Ohio and his B.A. with honors in Chemistry from Taylor University in Upland, Indiana.

         Timothy Wollaeger has served as a member of our board of directors since May 1999. Mr. Wollaeger has been a Managing Director of Sanderling Biomedical Ventures, an investment firm dedicated to building new biomedical companies, since 2002. Since 1994, he has also been the General Partner of Kingsbury Associates, L.P., a venture capital partnership. In 1990, Mr. Wollaeger helped found Columbia Hospital Corporation, now HCA Healthcare Corporation, and served as Senior Vice President and Director until 1993. Mr. Wollaeger received his M.B.A. from Stanford University and his B.A. in economics from Yale University. Mr. Wollaeger is chairman of the board of Biosite, Inc.

Key Employees

         Klaus Gubernator, Ph.D. , joined us as Vice President of Chemistry in June 2000 and became our Vice President, Development in June 2004. From November 1999 to June 2000, Dr. Gubernator was Executive Director of Advanced Technology at DuPont Pharmaceuticals Research Labs. From August 1997 until joining DuPont Pharmaceuticals, Dr. Gubernator was Vice President of Advanced Technology at CombiChem, Inc., where he directed the high-throughput synthesis laboratory as well as

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internal discovery projects. Dr. Gubernator received his B.S., Master's Degree and Ph.D. in organic chemistry from the University of Heidelberg, Germany.

         Nigel R.A. Beeley, Ph.D. , joined us in June 2004 as Vice President, Discovery. From March 1999 through June 2004, Dr. Beeley served as Vice President, Chief Chemical Officer of Arena Pharmaceuticals, a biopharmaceutical company. From 1994 to 1998, Dr. Beeley was Senior Director of Chemistry at Amylin Pharmaceuticals, Inc., a biotechnology company, and, from 1988 to 1994, he served as Head of Oncology-Chemistry for Celltech, a biotechnology company. From 1980 to 1988, Dr. Beeley held positions of increasing seniority in the cardiovascular group at Synthelabo Research, a pharmaceutical company, and, from 1978 to 1980, he was a CNS medicinal chemist in the pharmaceutical division of Reckitt and Coleman, a conglomerate. From 1976 to 1978, Dr. Beeley held a Royal Society Overseas Research Fellow at ETH, Zurich, Switzerland. Dr. Beeley has a B.Sc. Honours (Class 1) degree in Chemistry from the University of Liverpool, U.K. and a Ph.D. in Chemistry from the University of Manchester, U.K.

Scientific Advisory Board

        Our scientific advisory board consists of four of our scientific founders and others with scientific expertise. The scientific advisory board generally advises us concerning long-term scientific planning, research and development, and also evaluates our research programs, recommends personnel to us and advises us on specific scientific and technical issues. The scientific advisory board meets at least once per year, and some individual scientific advisors consult with and meet informally with us on a more frequent basis. Our scientific advisors own shares of our common stock or have an option to purchase common stock and we have entered into consulting agreements with them.

        None of our scientific advisors is employed by us, and any or all of our advisors may have commitments to or consulting or advisory contracts with their employers or other entities that may conflict or compete with their obligations to us. Accordingly, these persons are expected to devote only a small portion of their time to us. The members of our scientific advisory board are:

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Board Composition

        Our board of directors currently consists of six members. At each annual meeting of stockholders, the term of each director then serving shall expire, and the newly-elected directors shall serve from the time of election and qualification until the following annual meeting of stockholders and until their successors are duly elected and qualified. The authorized number of directors may be changed only by resolution of the board of directors. Our directors may be removed for cause by the affirmative vote of the holders of at least 66 2 / 3 % of our voting stock.

Board Committees

        Our board of directors has an audit committee, a compensation committee and a corporate governance and nominating committee.

        Our audit committee consists of Mark Leschly, Lori Robson, Ph.D. and Timothy Wollaeger. The functions of this committee include, among other things:

        We have appointed Timothy Wollaeger as our audit committee financial expert. Both our independent auditors and management periodically meet privately with our audit committee.

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        Our compensation committee consists of Lori Robson, Ph.D., David Schnell, M.D. and Jay M. Short, Ph.D. The functions of this committee include, among other things:

        Our corporate governance and nominating committee consists of David Schnell, M.D., Jay M. Short, Ph.D. and Timothy Wollaeger. The functions of this committee include, among other things:

Compensation Committee Interlocks and Insider Participation

        No member of our compensation committee has ever been an officer or employee of ours. None of our executive officers currently serves, or has served during the last completed fiscal year, on the compensation committee or board of directors of any other entity that has one or more executive officers serving as a member of our board of directors or compensation committee. Prior to establishing the compensation committee, our full board of directors made decisions relating to compensation of our executive officers. See "Certain Transactions" for a description of transactions between us and entities affiliated with members of our compensation committee.

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Director Compensation

        We have not provided cash compensation to our directors for their services as directors or members of committees of the board of directors. However, following the completion of this offering, we intend to provide cash compensation in the form of an annual retainer of $20,000 for our Chairman of the Board, and $15,000 for each other director. Each director shall also receive $2,000 for each in-person board of directors meeting attended, and $1,000 for each telephonic board of directors meeting attended. In addition, the chairperson of each committee shall receive $2,000 for each committee meeting attended, and each other committee member shall receive $1,000 for each committee meeting attended. We have reimbursed and will continue to reimburse our non-employee directors for their reasonable expenses incurred in attending meetings of our board of directors and committees of the board of directors.

        Effective upon the completion of this offering, our non-employee directors' nonstatutory stock option program will provide for the automatic grant of options to purchase shares of common stock to our non-employee directors. This program will be administered under our amended and restated 2004 equity incentive plan. In addition, all of our directors are generally eligible to participate in our 2004 equity incentive plan, and, following the completion of this offering, our employee directors will be eligible to participate in our 2004 employee stock purchase plan. For a more detailed description of the non-employee directors' nonstatutory stock option program and these plans, see "Benefit Plans."

Executive Compensation

        The following table sets forth in summary form information concerning the compensation that we paid during the fiscal year ended December 31, 2003 to our chief executive officer and to each of our other executive officers earning greater than $100,000 during the fiscal year ended December 31, 2003. We refer to these individuals in this prospectus as our "named executive officers."


Summary Compensation Table (1)

 
  Annual Compensation
  Long-Term Compensation
   
Name and Principal Position

  Salary
  Bonus(2)
  Other Annual
Compensation

  Restricted
Stock
Award(s)

  Securities
Underlying
Options/SARs

  LTIP Payouts
  All Other
Compensation

Kent Snyder
President, Chief Executive Officer and Director(3)
  $ 175,000   $ 49,597       798,660    

Mark Zoller, Ph.D.
Chief Scientific Officer and Sr. Vice President, Research

 

 

256,158

 

 

40,000

 


 


 


 


 


Klaus Gubernator, Ph.D.
Vice President, Development

 

 

226,775

 

 

17,500

 


 


 


 


 


(1)
In accordance with the rules of the SEC, the compensation described in this table does not include medical, group life insurance or other benefits that are available generally to all of our salaried employees and certain perquisites and other personal benefits received that do not exceed the lesser of $50,000 or 10% of any officer's salary and bonus disclosed in this table.

(2)
These amounts represent bonuses earned during the fiscal year ended December 31, 2003. Annual bonuses earned during a fiscal year are paid in the first quarter of the subsequent fiscal year.

(3)
Mr. Snyder began his employment with us in June 2003.

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Stock Option Grants in Last Fiscal Year

        All options granted to our named executive officers are incentive stock options, to the extent permissible under the Internal Revenue Code of 1986, as amended. Generally, 25% of the shares subject to options vest one year from the date of hire and the remainder of the shares vest in equal monthly installments over the 36 months thereafter. Options expire ten years from the date of grant.

        The exercise price per share of each option granted to our named executive officers was equal to the fair market value of our common stock as determined by our board of directors on the date of the grant. In determining the fair market value of our common stock granted on the grant date, our board of directors considered many factors, including:

        The following table provides information regarding grants of options to purchase shares of our common stock to our named executive officers in the fiscal year ended December 31, 2003:

 
  Individual Grants
   
   
 
   
  % of Total Options Granted to Employees in the Year Ended December 31, 2003(1)
   
   
   
   
 
  Number of Securities Underlying Options Granted
   
   
  Potential Realizable Value at Assumed Annual Rates of Stock Price Appreciation for Option Term(2)
Name

  Exercise or Base Price ($/Sh)
  Expiration Date
  5%
  10%
Kent Snyder   798,660   64.2 % $ 0.53   06/16/13   $ 17,793,765   $ 28,581,960

Mark Zoller, Ph.D.

 


 


 

 


 


 

 


 

 


Klaus Gubernator, Ph.D.

 


 


 

 


 


 

 


 

 


(1)
Based on 1,244,715 options granted during the fiscal year ended December 31, 2003 under our amended and restated 2004 equity incentive plan, including grants to executive officers.

(2)
Potential realizable values are computed by (a) multiplying the number of shares of common stock subject to a given option by an assumed initial public offering price of $14.00 per share, (b) assuming that the aggregate stock value derived from that calculation compounds at the annual 5% or 10% rate shown in the table for the entire ten-year term of the option and (c) subtracting from that result the aggregate option exercise price. The 5% and 10% assumed annual rates of stock price appreciation are mandated by the rules of the SEC and do not represent our estimate or projection of future common stock prices.

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Aggregated Option Exercises in Last Fiscal Year and Fiscal Year-End Option Values

        The following table provides information regarding the number of shares of common stock subject to exercisable and unexercisable stock options held as of December 31, 2003 by each of our named executive officers.

 
   
   
  Number of Securities Underlying Unexercised Options at Fiscal Year-End
  Value of Unexercised In-the-Money Options at Fiscal Year-End(1)
Name

  Shares Acquired on Exercise
  Value Realized
  Exercisable
  Unexercisable
  Exercisable
  Unexercisable
Kent Snyder       99,832   698,828   $ 1,345,236   $ 9,416,707

Mark Zoller, Ph.D.

 


 


 

66,962

 

58,749

 

 

861,363

 

 

766,132

Klaus Gubernator, Ph.D.

 


 


 

26,695

 

27,829

 

 

356,101

 

 

373,654

(1)
The value of an unexercised in-the-money option as of December 31, 2003 is equal to the excess of an assumed initial public offering price of $14.00 per share over the exercise price for the option, multiplied by the number of shares subject to the option, without taking into account any taxes that may be payable in connection with the transaction.

Employment Agreements

        We entered into an employment letter agreement with Kent Snyder dated June 2, 2003 providing for an annual salary of $350,000, later increased to $358,544, a discretionary bonus of up to 30% of the current base salary based upon performance against specific milestones to be designated by the board of directors, and upon commencement of employment the grant of an option to purchase our common stock under our amended and restated 2004 equity incentive plan constituting 4% of our outstanding shares on a fully diluted basis as of the date of grant assuming conversion of all outstanding preferred stock to common stock and including all shares reserved for issuance under our amended and restated 2004 equity incentive plan. The employment letter agreement provides that Mr. Snyder's employment is terminable at-will upon 30-days notice. However, if we terminate Mr. Snyder's employment for any reason other than cause, he will be entitled to one year's salary from the date of termination; and one year of accelerated vesting of his stock options if the termination is within one year of the employment commencement date. In the event of termination, within 36 months following a change in control, his stock options will immediately vest in full.

        We entered into an employment letter agreement with Mark Zoller, Ph.D., dated February 21, 2000, providing for an annual salary of $220,000, later increased to $266,289, and the opportunity to purchase 114,285 shares of restricted common stock. Under the terms of the agreement, Dr. Zoller received a one-time, sign-on bonus, payable on his first day of employment, equal to $210,000. The employment letter agreement provides that Dr. Zoller's employment is terminable at-will.

        We entered into an employment letter agreement with Harry Leonhardt, Esq., dated August 25, 2003, providing for an annual salary of $225,000, later increased to $228,162, a discretionary bonus of up to 25% of the current base salary based upon performance against specific milestones to be determined by the chief executive officer and, upon commencement of employment, the grant of an option to purchase 131,428 shares of our common stock. The employment letter agreement provides that Mr. Leonhardt's employment is terminable at-will upon 30-days notice. If a change in control occurs and Mr. Leonhardt's employment is terminated within one month prior or 18 months after the date of such change in control, Mr. Leonhardt's stock options will immediately vest in full.

        We entered into an employment letter agreement with John Poyhonen, dated September 8, 2003, providing for an annual salary of $225,000, later increased to $227,386, a discretionary bonus of up to

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25% of the current base salary based upon performance against specific milestones to be determined by the chief executive officer and, upon commencement of employment, the grant of an option to purchase 131,428 shares of our common stock. The employment letter agreement provides that Mr. Poyhonen's employment is terminable at-will upon 30-days notice. If a change in control occurs and Mr. Poyhonen's employment is terminated within one month prior or 18 months after the date of such change in control, Mr. Poyhonen's stock options will immediately vest in full.

        We entered into an employment letter agreement with Klaus Gubernator, Ph.D., dated June 7, 2000, providing for an annual salary of $200,000, later increased to $235,744, and the opportunity to purchase 114,285 shares of restricted common stock. The employment letter agreement provides that Dr. Gubernator's employment is terminable at-will. However, if we terminate his employment without cause, Dr. Gubernator is entitled to three months' severance pay.

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Employee Benefit Plans

        We adopted our 1999 equity incentive plan in January 1999 and our stockholders approved such plan in February 1999. We adopted the amendment and restatement of our 1999 equity incentive plan into the 2004 equity incentive plan, or the 2004 plan, in April of 2004, to become effective upon the completion of this offering. Our stockholders approved the 2004 plan in June 2004. All outstanding awards granted under the 1999 equity incentive plan shall remain subject to the terms of such plan. The 2004 plan will terminate in April 2014, unless our board of directors terminates it earlier. The 2004 plan provides for the grant of the following:

        Share Reserve.     An aggregate of 4,965,000 shares of our common stock are reserved for issuance under the 2004 Plan. This amount will be increased annually on the first day of our fiscal year, from 2005 until (and including) 2013, by the lesser of (1) 5% of the fully-diluted shares of common stock outstanding on the day preceding the first day of such fiscal year, (2) 1,700,000 shares of common stock or (3) such number of shares as may be determined by our board of directors.

        Shares subject to stock awards that expire, terminate, are repurchased, or are forfeited under the 2004 plan will again become available for the grant of awards under the 2004 plan. Shares issued under the 2004 plan may be previously unissued shares or reacquired shares bought on the market or otherwise. If any shares subject to a stock award are not delivered to a participant because such shares are withheld for the payment of taxes or the stock award is exercised through a "net exercise," the number of shares that are not delivered to the participant shall remain available for the grant of awards under the 2004 plan. If the exercise price of any stock award is satisfied by tendering shares of common stock held by the participant, the number of shares tendered shall remain available for the grant of awards under the 2004 plan. The maximum number of shares that may be issued under the 2004 plan subject to incentive stock options is 25,000,000.

        Administration.     The 2004 plan will be administered by our board of directors, who may in turn delegate authority to administer the 2004 plan to a committee. Subject to the terms of the 2004 plan, our board of directors or its authorized committee determines recipients, the numbers and types of stock awards to be granted and the terms and conditions of the stock awards, including the period of their exercisability and vesting. Subject to the limitations set forth below, our board of directors or its authorized committee will also determine the exercise price of options granted under the 2004 plan and may reprice such options, which includes reducing the exercise price of any outstanding option, canceling an option in exchange for cash or another equity award or any other action that is treated as a repricing under generally accepted accounting principles. Subject to the terms of the 2004 plan, our board of directors may delegate to one or more of our officers the authority to grant stock awards to our other officers and employees. Such officer would be able to grant only the total number of stock awards specified by our board of directors and such officer would not be allowed to grant a stock award to himself or herself.

        Stock Options.     Stock options are granted pursuant to stock option agreements. Generally, the exercise price for an incentive stock option cannot be less than 100% of the fair market value of the common stock on the date of grant. The exercise price for a nonstatutory stock option shall be

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determined by our board of directors or its authorized committee. Options granted under the 2004 plan vest at the rate specified in the option agreement.

        In general, the term of stock options granted under the 2004 plan may not exceed ten years. Unless the terms of an optionee's stock option agreement provide for earlier or later termination, if an optionee's service relationship with us, or any affiliate of ours, ceases due to disability or death, the optionee, or his or her beneficiary, may exercise any vested options up to 12 months, or 18 months in the event of death, after the date such service relationship ends. If an optionee's service relationship with us, or any affiliate of ours, ceases without cause for any reason other than disability or death, the optionee may exercise any vested options up to three months from cessation of service, unless the terms of the stock option agreement provide for earlier or later termination. If an optionee's relationship with us, or any affiliate of ours, ceases with cause, the option will terminate at the time the optionee's relationship with us ceases. In no event may an option be exercised after its expiration date.

        Acceptable consideration for the purchase of common stock issued under the 2004 plan will be determined by our board of directors and may include cash, common stock previously owned by the optionee, the net exercise of the option, consideration received in a "cashless" broker-assisted sale and other legal consideration approved by our board of directors.

        Generally, an optionee may not transfer a stock option other than by will or the laws of descent and distribution unless the optionee holds a nonstatutory stock option that provides otherwise. However, an optionee may designate a beneficiary who may exercise the option following the optionee's death.

        Limitations.     Incentive stock options may be granted only to our employees. The aggregate fair market value, determined at the time of grant, of shares of our common stock with respect to incentive stock options that are exercisable for the first time by an optionee during any calendar year under all of our stock plans may not exceed $100,000. The options or portions of options that exceed this limit are treated as nonstatutory stock options. No incentive stock option may be granted to any person who, at the time of the grant, owns or is deemed to own stock possessing more than 10% of our total combined voting power or any affiliate unless the following conditions are satisfied:

        In addition, no employee may be granted options or stock appreciation rights under the 2004 plan covering more than 1,000,000 shares of common stock in any calendar year.

        Stock Purchase and Bonus Awards.     Stock purchase or bonus awards are granted through a purchase or bonus award agreement. Stock bonus awards may be granted in consideration for the recipient's past services for us. Subject to certain limitations, the purchase price for stock purchase or bonus awards must be at least the par value of our common stock. The purchase price for a stock purchase award may be payable in cash, by services rendered to us, or any other form of legal consideration approved by our board of directors. Common stock under a stock purchase or bonus award agreement may be subject to a share repurchase option or forfeiture right in our favor, each in accordance with a vesting schedule. If a recipient's service relationship with us terminates, we may reacquire or receive via forfeiture all of the shares of our common stock issued to the recipient pursuant to a stock purchase or bonus award which have not vested as of the date of termination. Rights to acquire shares under a stock purchase or bonus award may be transferred to the extent provided in the award agreement so long as the common stock awarded pursuant to the grant remains subject to the terms of the original award agreement.

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        Stock Appreciation Rights.     Stock appreciation rights are granted through a stock appreciation right agreement. Each stock appreciation right is denominated in share equivalents. The strike price of each stock appreciation right is determined by our board of directors or its authorized committee at the time of grant of the stock appreciation right. Our board of directors or its authorized committee may also impose any restrictions or conditions upon the vesting of stock appreciation rights that it deems appropriate. Stock appreciation rights may be paid in our common stock or in cash or any combination of the two, or any other form of legal consideration approved by our board of directors. If a stock appreciation right recipient's relationship with us, or any affiliate of ours, ceases for any reason, the recipient may exercise any vested stock appreciation right up to three months from cessation of service, unless the terms of the stock appreciation right agreement provide for earlier or later termination.

        Stock Unit Awards.     Stock unit awards are purchased through a stock unit award agreement. Subject to certain limitations, the consideration, if any, for stock unit awards must be at least the par value of our common stock. The consideration for a stock unit award may be payable in any form permitted under applicable laws. Our board of directors or its authorized committee may impose any restrictions or conditions upon the vesting of stock unit awards, or that delay the delivery of the consideration after the vesting of stock unit awards, that it deems appropriate. Stock unit award may be settled in our common stock or in cash or any combination of the two, or any other form of legal consideration approved by our board of directors. Dividend equivalents may be credited in respect of shares covered by a stock unit award, as determined by our board of directors. At the discretion of our board of directors, such dividend equivalents may be converted into additional shares covered by the stock unit award. If a stock unit award recipient's service relationship with us terminates, any unvested portion of the stock unit award is forfeited upon the recipient's termination of service.

        Other Stock Awards.     Other forms of stock awards based on our common stock may be granted either alone or in addition to other stock awards under the 2004 plan. Our board of directors has sole and complete authority to determine the persons to whom and the time or times at which such other stock awards will be granted, the number of shares of our common stock to be granted and all other conditions of such other stock awards.

        Corporate Transactions.     In the event of certain corporate transactions, all outstanding stock awards under the 2004 plan may be assumed, continued or substituted for by any surviving entity. If the surviving entity elects not to assume, continue or substitute for such awards, the vesting provisions of such stock awards will be accelerated and such stock awards will be terminated if not exercised prior to the effective date of the corporate transaction. In general, an option grant will accelerate and vest in full if within 1 month prior to or 18 months following the effective date of a change in our control, an optionholder's continuous service is terminated without cause or the optionholder resigns for good reason. In addition, a stock award may be subject to acceleration of vesting in the event of a change in control as may be provided in an individual stock award agreement.

        Non-Employee Directors' Nonstatutory Stock Option Program.     The 2004 plan includes a non-employee directors' nonstatutory stock option program, or the directors' program. The directors' program provides for the automatic grant of nonstatutory stock options to our non-employee directors. In general, the directors' program provides the following:

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        Plan Amendments.     Our board of directors will have authority to amend or terminate the 2004 plan. No amendment or termination of the 2004 plan shall adversely affect any rights under awards already granted to a participant unless agreed to by the affected participant. To the extent necessary to comply with applicable provisions of federal securities laws, state corporate and securities laws, the Internal Revenue Code, the rules of any applicable stock exchange or national market system, and the rules of any non-United States jurisdiction applicable to awards granted to residents therein, we shall obtain stockholder approval of any such amendment to the 2004 plan in such a manner and to such a degree as required.

        We adopted our 2004 employee stock purchase plan, or the ESPP, in April 2004, to become effective upon the closing of this offering. Our stockholders approved the ESPP in June 2004. The ESPP will terminate at the time that all of the shares of our common stock reserved for issuance under the ESPP have been issued under the terms of the ESPP, unless our board of directors terminates it earlier. The ESPP provides a means by which employees may purchase our common stock through payroll deductions, and is intended to qualify as an employee stock purchase plan within the meaning of Section 423 of the Internal Revenue Code.

        Share Reserve.     An aggregate of 140,000 shares of our common stock are reserved for issuance under the ESPP. This amount will be increased annually on the first day of our fiscal year, from 2005 until (and including) 2013, by the lesser of (1) 1% of the fully-diluted shares of common stock outstanding on the day preceding the first day of such fiscal year, (2) 280,000 shares of common stock or (3) such number of shares as may be determined by our board of directors.

        Administration.     The ESPP will be administered by our board of directors, who may in turn delegate authority to administer the ESPP to a committee.

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        Offering.     The ESPP is implemented by offerings of rights to eligible employees. Under the ESPP, we may specify offerings with a duration of not more than 27 months, and may specify shorter purchase periods within each offering. The first offering will begin on the effective date of this offering and be approximately 24 months in duration with purchases occurring approximately every six months. An additional new offering will automatically begin on September 1, 2004 and every six months thereafter.

        Unless otherwise determined by the board of directors or its authorized committee, common stock is purchased for accounts of employees participating in the ESPP at a price per share equal to the lower of (1) 85% of the fair market value of a share of our common stock on the date of commencement of participation in the offering or (2) 85% of the fair market value of a share of our common stock on the date of purchase. Generally, all regular employees, including executive officers, who work more than 20 hours per week and are customarily employed by us for more than five months per calendar year may participate in the ESPP and may authorize payroll deductions of up to 15% of their earnings for the purchase of common stock under the ESPP.

        Limitations.     Eligible employees may be granted rights only if the rights, together with any other rights granted under employee stock purchase plans, do not permit the employee's rights to purchase our stock to accrue at a rate which exceeds $25,000 of the fair market value of the stock for each calendar year in which such rights are outstanding. In addition, no employee will be eligible for the grant of any rights under the ESPP if immediately after such rights are granted, such employee has voting power over 5% or more of our outstanding capital stock.

        Corporate Transactions.     In the event of certain corporate transactions, all outstanding purchase rights under the ESPP may be assumed or substituted for by any surviving entity. If the surviving entity elects not to assume or substitute for such purchase rights, then the purchase rights will be exercised prior to the corporate transaction and the ongoing offerings and purchase rights will terminate immediately following such exercise.

        Plan Amendments.     Our board of directors will have the authority to amend or terminate the ESPP. If the board determines that the amendment or termination of an offering is in the best interests of the Company and its stockholders, then the board may terminate any offering on any purchase date, establish a new purchase date with respect to any offering then in progress, amend the ESPP and the ongoing offering to reduce or eliminate a detrimental accounting treatment or terminate any offering and refund any money contributed back to the participants. To the extent necessary to comply with applicable provisions of federal securities laws, state corporate and securities laws, the Internal Revenue Code, the rules of any applicable stock exchange or national market system, and the rules of any non-United States jurisdiction applicable to awards granted to residents therein, we shall obtain stockholder approval of any such amendment to the ESPP in such a manner and to such a degree as required.

        We maintain a defined contribution employee retirement plan for our employees. The plan is intended to qualify as a tax-qualified plan under Section 401(k) of the Internal Revenue Code. Employees are eligible to participate immediately upon commencing service. The plan provides that each participant may contribute a percentage of his or her pre-tax compensation, up to a statutory limit, which is $13,000 for calendar year 2004. Participants that are 50 years or older can also make "catch-up" contributions, which in calendar year 2004 may be up to an additional $3,000 above the statutory limit. Participant contributions are held in trust as required by law. Individual participants may direct the trustee to invest their accounts in authorized investment alternatives. We may make discretionary matching contributions to the plan each year in an amount equal to a percentage of the participant's salary reduction contributions. In addition, we may make discretionary and special

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contributions each year, although we have not done so to date. Each participant is fully vested in his or her salary reduction contributions and our special contributions to the plan.

Limitation of Liability and Indemnification

        Our amended and restated certificate of incorporation, which will become effective upon the completion of this offering, limits the liability of directors to the maximum extent permitted by Delaware law. Delaware law provides that directors of a corporation will not be personally liable for monetary damages for breach of their fiduciary duties as directors, except liability for any of the following acts:

        These limitations of liability do not apply to liabilities arising under federal securities laws and do not affect the availability of equitable remedies such as injunctive relief or rescission.

        Our amended and restated bylaws, which will become effective upon the completion of this offering, provide that we will indemnify our directors and executive officers, and may indemnify other officers, employees and other agents, to the fullest extent permitted by law. Our amended and restated bylaws also permit us to secure insurance on behalf of any officer, director, employee or other agent for any liability arising out of his or her actions in connection with his or her services to us, regardless of whether our amended and restated bylaws permit such indemnification. We have obtained a policy of directors' and officers' liability insurance.

        We have entered, and intend to continue to enter, into separate indemnification agreements with our directors and executive officers, in addition to the indemnification provided for in our amended and restated bylaws. These agreements, among other things, require us to indemnify our directors and executive officers for certain expenses, including attorneys' fees, judgments, fines and settlement amounts incurred by a director or executive officer in any action or proceeding arising out of their services as one of our directors or executive officers, or any of our subsidiaries or any other company or enterprise to which the person provides services at our request.

        At present we are not aware of any pending litigation or proceeding involving any director, officer, employee or agent where indemnification will be required or permitted. Furthermore, we are not aware of any threatened litigation or proceeding that might result in a claim for indemnification.

        Insofar as indemnification for liabilities arising under the Securities Act may be permitted to directors, executive officers or persons controlling us, we have been informed that in the opinion of the SEC such indemnification is against public policy as expressed in the Securities Act and is therefore unenforceable.

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CERTAIN TRANSACTIONS

        The following is a description of transactions since our inception to which we have been a party, in which the amount involved in the transaction exceeds $60,000, and in which any of our directors, executive officers or holders of more than 5% of our capital stock had or will have a direct or indirect material interest, other than compensation, termination and change in control arrangements, which are described under "Management." We believe the terms obtained or consideration that we paid or received, as applicable, in connection with the transactions described below were comparable to terms available or the amounts that would be paid or received, as applicable, in arm's-length transactions.

Convertible Promissory Notes

        From February 1999 to April 1999, we issued convertible promissory notes in an aggregate principal amount of $999,550. The notes bore interest at the rate of 8% per annum and were ultimately converted into shares of our Series A preferred stock in connection with our Series A preferred stock financing in October 1999. The following directors and 5% stockholders received promissory notes in the following amounts:

Director

  Amount
Kevin J. Kinsella   $ 299,850
Lubert & Andrea Stryer     100,000
Entities affiliated with Domain Associates, LLC     299,850
Kingsbury Capital Partners, L.P. III     299,850

Preferred Stock Financing Transactions

        In October 1999, we sold 8,648,158 shares of Series A preferred stock at a purchase price of $1.4215 per share, comprised of $11,261,207 in cash and $1,032,150 in principal and interest under convertible promissory notes. Of the 8,648,158 shares of Series A preferred stock sold by us, a total of 7,522,589 shares were sold to our executive officers, directors and greater than 5% stockholders, and persons associated with them, listed in the table below for a total purchase price of $10,693,360. The shares of Series A preferred stock were sold under a Series A preferred stock purchase agreement dated October 1, 1999.

        In August 2000, we sold 2,605,326 shares of Series B preferred stock at a purchase price of $3.8497 per share. Of the 2,605,326 shares of Series B preferred stock sold by us, a total of 1,393,138 shares were sold to our executive officers, directors and greater than 5% stockholders, and persons associated with them, listed in the table below for a total purchase price of $5,363,163. The shares of Series B preferred stock were sold under a Series B preferred stock purchase agreement dated August 10, 2000.

        In November 2000, we sold 1,000,000 shares of Series C preferred stock to Aurora at a purchase price of $4.80 per share. The shares of Series C preferred stock were sold under a Series C preferred stock purchase agreement dated November 9, 2000.

        In January 2001, we sold 869,328 shares of Series D preferred stock to Incyte at a purchase price of $7.50 per share, which was offset by an equal payment made by us to Incyte under a separate technology collaboration agreement. The shares of Series D preferred stock were sold under a Series D preferred stock purchase agreement dated January 9, 2001.

        In November 2001 and February 2002, we sold 12,703,014 shares of Series E preferred stock at a purchase price of $2.8999 per share. Of the 12,703,014 shares of Series E preferred stock sold by us, a total of 11,151,235 shares were sold to our executive officers, directors and greater than 5% stockholders, and persons associated with them, listed in the table below for a total purchase price of

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$32,337,466. The shares of Series E preferred stock were sold under a Series E preferred stock purchase agreement dated November 14, 2001, and amended on February 27, 2002.

        We entered into other agreements in connection with the Series A, Series B, Series C, Series D and Series E preferred stock purchase agreements. Under one of these agreements, our amended and restated investor rights agreement, some of our stockholders are entitled to registration rights. See "Description of Capital Stock—Registration Rights." Further, we agreed with certain stockholders to restrictions on the issuance and transfer of shares of our capital stock, and to voting rights relating to the election of directors, all of which restrictions and voting rights are not applicable to, and will terminate upon the closing of, this offering.

        The following table summarizes the shares of common stock and preferred stock purchased by our executive officers, directors and 5% stockholders and persons associated with them, through March 31, 2004. For a description of current beneficial ownership, see "Principal Stockholders."

 
   
  Preferred Stock
  Total Shares on an as-Converted Basis
Executive Officers, Directors and 5% Stockholders

  Common Stock
  Series A(1)
  Series B(2)
  Series E(1)
Entities affiliated with Bay City Capital, L.L.C.(3)     2,110,446   499,441   1,137,970   2,174,539
Rho Ventures(4)   94,285   703,482   186,021   2,413,877   1,994,186
Merrill Lynch Ventures L.P. 2001         3,448,394   1,970,510
Entities affiliated with Prospect Venture Partners, L.P.(5)     1,406,964   342,731   1,564,697   1,916,518
Entities affiliated with Domain Associates, L.L.C.(6)   85,714   1,758,599   129,880   862,099   1,666,026
Entities affiliated with Hambrecht & Quist(7)         1,724,198   985,255
Entities affiliated with Kingsbury Associates, L.P.(8)   85,714   1,055,223   235,065     838,508
Kent Snyder   200,000         200,000
Mark Zoller, Ph.D.   182,856         182,856
Klaus Gubernator, Ph.D.   168,810         168,810
Harry Leonhardt, Esq.   131,428         131,428
John Poyhonen   131,428         131,428

(1)
Each share of Series A and Series E preferred stock is convertible into 0.571429 shares of our common stock.

(2)
Each share of Series B preferred stock is convertible into 0.637318 shares of our common stock.

(3)
Lori Robson, Ph.D. is a principal of Bay City Capital, L.L.C., which controls The North American Nutrition and Agribusiness Fund, L.P., and disclaims beneficial ownership of the shares held by the fund except to the extent of her pecuniary interest in these entities.

(4)
Mark Leschly is a managing partner of Rho Capital Partners, Inc., which is the investment advisor to Rho Management Trust I and as such exercises voting and investment control over the shares held by Rho Management Trust I. Mr. Leschly disclaims beneficial ownership of the shares held by Rho Management Trust I except to the extent of his pecuniary interest therein.

(5)
Dr. Schnell co-founded and is a managing director of Prospect Management Co., L.L.C. and Prospect Management Co. II, L.L.C., which serves as the general partner of Prospect Venture Partners, L.P. and Prospect Venture Partners II, L.P., respectively, and disclaims beneficial

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(6)
Reflects shares held by Domain Partners IV, L.P. and DP IV Associates, L.P. Any one of the following managing members may make voting or investment decisions regarding the shares: James C. Blair, Brian H. Dovey, Kathleen K. Shoemaker and Jessie I. Treu. Each of these managing members disclaims beneficial ownership of these shares except to the extent of their pecuniary interest in these entities.

(7)
Reflects shares held by H&Q Healthcare Investors and H&Q Life Sciences Investors.

(8)
Reflects shares held by Kingsbury Capital Partners, L.P. III and Kingsbury Capital Partners, L.P. IV. Timothy Wollaeger is a general partner of Kingsbury Associates, L.P. and disclaims beneficial ownership of the shares held by entities associated with Kingsbury Associates, L.P. except to the extent of his pecuniary interest in these entities.

Other Related Party Transactions

        From our inception to March 31, 2004, we granted options to purchase an aggregate of 1,270,329 shares of common stock with exercise prices ranging from $0.53 to $1.75, and 228,570 restricted stock purchase rights at an exercise price of $0.25, to our current directors and executive officers.

        We have entered into indemnification agreements with each of our directors and executive officers, as described in "Management—Limitation of Liability and Indemnification."

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PRINCIPAL STOCKHOLDERS

        The following table sets forth information regarding beneficial ownership of our capital stock by:

        The percentage ownership information shown in the table is based upon (1) shares outstanding as of March 31, 2004, (2) the conversion of all outstanding shares of our preferred stock into 15,214,719 shares of common stock upon the completion of this offering and (3) the issuance of 6,000,000 shares of common stock in this offering. The percentage ownership information assumes no exercise of the underwriters' over-allotment option.

        Each individual or entity shown in the table has furnished information with respect to beneficial ownership. We have determined beneficial ownership in accordance with the SEC's rules. These rules generally attribute beneficial ownership of securities to persons who possess sole or shared voting power or investment power with respect to those securities. In addition, the rules include shares of common stock issuable pursuant to the exercise of stock options or warrants that are either immediately exercisable or exercisable on May 30, 2004, which is 60 days after March 31, 2004. These shares are deemed to be outstanding and beneficially owned by the person holding those options or warrants for the purpose of computing the percentage ownership of that person, but they are not treated as outstanding for the purpose of computing the percentage ownership of any other person. All of the options in this table are exercisable at any time but, if exercised, are subject to a lapsing right of repurchase until the options are fully vested. Unless otherwise indicated, the persons or entities identified in this table have sole voting and investment power with respect to all shares shown as beneficially owned by them, subject to applicable community property laws and except to the extent authority is shared by both spouses under applicable law.

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        Except as otherwise noted below, the address for each person or entity listed in the table is c/o Senomyx, Inc., 11099 North Torrey Pines Road, La Jolla, California 92037.

 
   
  Percentage of Shares
Beneficially Owned

 
 
  Number of
Shares
Beneficially
Owned

 
Beneficial Owner

  Before
Offering

  After
Offering

 
Entities affiliated with Bay City Capital, L.L.C.(1)   2,174,539   11.6 % 8.8 %
Lori Robson, Ph.D.(1)   2,174,539   11.6   8.8  
Rho Ventures(2)   1,994,186   10.7   8.1  
Mark Leschly(2)   1,994,186   10.7   8.1  
Merrill Lynch Ventures LP 2001(3)   1,970,510   10.6   8.0  
Entities affiliated with Prospect Venture Partners, L.P.(4)   1,916,518   10.3   7.8  
David Schnell, M.D.(4)   1,916,518   10.3   7.8  
Entities affiliated with Domain Associates, L.L.C.(5)   1,666,026   8.9   6.8  
Entities affiliated with Hambrecht & Quist(6)   985,255   5.3   4.0  
Entities affiliated with Kingsbury Associates, L.P.(7)   838,508   4.5   3.4  
Timothy Wollaeger(7)   838,508   4.5   3.4  
Kent Snyder(8)   798,659   4.1   3.2  
Mark Zoller, Ph.D.(9)   239,998   1.3   1.0  
Klaus Gubernator, Ph.D.(10)   168,808   *   *  
Jay M. Short, Ph.D.(11)   28,571   *   *  
All directors and executive officers as a group (10 persons)(12)   8,422,643   43.6   33.2  

*
Represents beneficial ownership of less than 1%.

(1)
Dr. Robson is a principal of Bay City Capital, L.L.C., which controls The North American Nutrition and Agribusiness Fund, L.P., and disclaims beneficial ownership of the shares held by the fund except to the extent of her pecuniary interest in these entities. The address for the fund is 750 Battery Street, Suite 400, San Francisco, CA 94111.

(2)
Includes 70,714 shares of common stock subject to our right of repurchase as of May 30, 2004. Mark Leschly is a managing partner of Rho Capital Partners, Inc., which is the investment advisor to Rho Management Trust I and as such exercises voting and investment control over the shares held by Rho Management Trust I. Mr. Leschly disclaims beneficial ownership of the shares held by Rho Management Trust I except to the extent of his pecuniary interest therein. The address for the trust is 152 West 57th Street, 23rd Floor, New York, NY 10019.

(3)
The address for Merrill Lynch Ventures LP 2001 is 4 World Financial Center, 23rd Floor, New York, NY 10080.

(4)
Dr. Schnell co-founded and is a managing director of Prospect Management Co., L.L.C. and Prospect Management Co. II, L.L.C., which serves as the general partner of Prospect Venture Partners, L.P. and Prospect Venture Partners II, L.P., respectively, and disclaims beneficial ownership of any shares held by the funds except to the extent of his pecuniary interest in this entity. The address for the fund is 435 Tasso Street, Suite 200, Palo Alto, CA 94305.

(5)
Reflects 1,638,568 shares held by Domain Partners IV, L.P. and 27,458 shares held by DP IV Associates, L.P. Any one of the following managing members may make voting or investment decisions regarding the shares: James C. Blair, Brian H. Dovey, Kathleen K. Shoemaker and Jessie I. Treu. Each of these managing members disclaims beneficial ownership of these shares except to the extent of their pecuniary interest in these entities. The address for Domain Associates is One Palmer Square, Princeton, NJ 08542.

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(6)
Reflects 591,153 shares held by H&Q Healthcare Investors and 394,102 shares held by H&Q Life Sciences Investors. The address for Hambrecht & Quist is 30 Rowes Wharf, Suite 430, Boston, MA 02110.

(7)
Reflects 733,351 shares held by Kingsbury Capital Partners, L.P. III and 105,157 shares held by Kingsbury Capital Partners, L.P. IV. Mr. Wollaeger is a general partner of Kingsbury Associates, L.P. and disclaims beneficial ownership of the shares held by entities associated with Kingsbury Associates, L.P. except to the extent of his pecuniary interest in these entities. The address for Kingsbury Capital is 3655 Nobel Drive, Suite 490, San Diego, CA 92122.

(8)
Includes 598,660 shares of common stock subject to options exercisable within 60 days of March 31, 2004, all of which are not vested as of May 30, 2004. Also includes 16,973 shares of common stock subject to our right of repurchase as of May 30, 2004.

(9)
Includes 57,142 shares of common stock subject to options exercisable within 60 days of March 31, 2004, 15,655 shares of which are not vested as of May 30, 2004. Also includes 30,000 shares of common stock subject to our right of repurchase as of May 30, 2004.

(10)
Includes 24,544 shares of common stock subject to our right of repurchase as of May 30, 2004.

(11)
Includes 28,571 shares of common stock subject to our right of repurchase as of May 30, 2004.

(12)
Includes 655,802 shares of common stock subject to options exercisable within 60 days of March 31, 2004, 614,316 of which are not vested as of May 30, 2004. Also includes 433,661 shares of common stock subject to our right of repurchase as of May 30, 2004.

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DESCRIPTION OF CAPITAL STOCK

        Upon the closing of this offering and the filing of our amended and restated certificate of incorporation, our authorized capital stock will consist of 120,000,000 shares of common stock, $0.001 par value per share, and 7,500,000 shares of preferred stock, $0.001 par value per share.

        The following is a summary of the rights of our common stock and preferred stock. This summary is not complete. For more detailed information, please see our amended and restated certificate of incorporation and bylaws, which are filed as exhibits to the registration statement of which this prospectus is a part.

Common Stock

        Based on the fact that we have 3,463,082 shares of common stock outstanding as of March 31, 2004, the conversion of preferred stock into 15,214,719 shares of common stock upon completion of this offering, the issuance of 6,000,000 shares of common stock in this offering and no exercise of options or warrants, there will be 24,677,801 shares of common stock outstanding upon completion of this offering.

        As of March 31, 2004, there were 1,340,495 shares of common stock subject to outstanding options under our amended and restated 2004 equity incentive plan, and 14,285 shares of common stock subject to outstanding warrants.

        As of March 31, 2004, we had approximately 99 record holders of our common stock.

        Each holder of common stock is entitled to one vote for each share on all matters submitted to a vote of the stockholders, including the election of directors. Our amended and restated certificate of incorporation and bylaws do not provide for cumulative voting rights. Because of this, the holders of a majority of the shares of common stock entitled to vote in any election of directors can elect all of the directors standing for election, if they should so choose.

        Subject to preferences that may be applicable to any then outstanding preferred stock, holders of common stock are entitled to receive ratably those dividends, if any, as may be declared from time to time by our board of directors out of legally available funds.

        In the event of our liquidation, dissolution or winding up, holders of common stock will be entitled to share ratably in the net assets legally available for distribution to stockholders after the payment of all of our debts and other liabilities and the satisfaction of any liquidation preference granted to the holders of any outstanding shares of preferred stock.

        Holders of common stock have no preemptive, conversion or subscription rights, and there are no redemption or sinking fund provisions applicable to the common stock. The rights, preferences and privileges of the holders of common stock are subject to, and may be adversely affected by, the rights of the holders of shares of any series of preferred stock which we may designate in the future.

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        All of our outstanding shares of common stock are, and the shares of common stock to be issued in this offering will be, fully paid and nonassessable.

Preferred Stock

        Upon the closing of this offering, our board of directors will have the authority, without further action by the stockholders, to issue up to 7,500,000 shares of preferred stock in one or more series, to establish from time to time the number of shares to be included in each such series, to fix the rights, preferences and privileges of the shares of each wholly unissued series and any qualifications, limitations or restrictions thereon, and to increase or decrease the number of shares of any such series (but not below the number of shares of such series then outstanding).

        Our board of directors may authorize the issuance of preferred stock with voting or conversion rights that could adversely affect the voting power or other rights of the holders of the common stock. The issuance of preferred stock, while providing flexibility in connection with possible acquisitions and other corporate purposes, could, among other things, have the effect of delaying, deferring or preventing a change in control and may adversely affect the market price of the common stock and the voting and other rights of the holders of common stock. We have no current plans to issue any shares of preferred stock.

Warrants

        In connection with an equipment loan, warrants to purchase up to 14,285 shares of common stock at $1.75 per share were issued to and are exercisable by Silicon Valley Bank. The estimated fair market value of the warrants of $16,000 was recorded as a discount on the equipment loan and was amortized to interest expense over the term of the equipment loan.

Registration Rights

        After this offering, the holders of 15,214,719 shares of common stock and warrants to purchase 14,285 shares of common stock will be entitled to rights with respect to the registration of such shares under the Securities Act, under an amended and restated investor rights agreement. Under the terms of the amended and restated investor rights agreement, if we propose to register any of our securities under the Securities Act, either for our own account or for the account of other security holders exercising registration rights, these holders are entitled to notice of that registration and are entitled, subject to limitations, to include their shares in that registration. Commencing with the date that is six months after this offering, the holders may also require us to file a registration statement under the Securities Act with respect to their shares, and we are required to use our best efforts to effect a registration. Furthermore, the holders may require us to register their shares on a registration statement on Form S-3 when such form becomes available to us. Such registration rights terminate on the fifth anniversary of the date of this offering.

        Generally, we are required to bear all registration and selling expenses incurred in connection with any of the registrations described above. The registration rights are also subject to conditions and limitations, among them the right of the underwriters of a public offering to limit the number of shares included in the registration statement filed in connection therewith.

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Delaware Anti-Takeover Law and Provisions of our Amended and Restated Certificate of Incorporation and Bylaws

        We are subject to Section 203 of the Delaware General Corporation Law. Section 203 generally prohibits a public Delaware corporation from engaging in a "business combination" with an "interested stockholder" for a period of three years after the date of the transaction in which the person became an interested stockholder, unless:

        Section 203 defines a business combination to include:

        In general, Section 203 defines an interested stockholder as any entity or person beneficially owning 15% or more of the outstanding voting stock of the corporation and any entity or person affiliated with or controlling or controlled by the entity or person.

        Provisions of our amended and restated certificate of incorporation and bylaws, which will become effective upon the completion of this offering, may delay or discourage transactions involving an actual or potential change in our control or change in our management, including transactions in which stockholders might otherwise receive a premium for their shares, or transactions that our stockholders might otherwise deem to be in their best interests. Therefore, these provisions could adversely affect the price of our common stock. Among other things, our amended and restated certificate of incorporation and bylaws:

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        The amendment of any of these provisions would require approval by the holders of at least 66 2 / 3 % of our then outstanding common stock.

Nasdaq National Market Listing

        Our common stock has been approved for quotation on the Nasdaq National Market under the symbol "SNMX," subject to official notice of issuance.

Transfer Agent and Registrar

        The transfer agent and registrar for our common stock is Mellon Investor Services LLC. The transfer agent and registrar's address is 400 South Hope Street, 4th Floor, Los Angeles, CA 90071.

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MATERIAL UNITED STATES FEDERAL INCOME
TAX CONSEQUENCES TO NON-UNITED STATES HOLDERS

        The following is a general discussion of the material United States federal income tax consequences of the ownership and disposition of our common stock to a non-United States holder. For purposes of this discussion, a non-United States holder is any holder that for United States federal income tax purposes is not a United States person. The term United States person means:

        If a partnership or other pass-through entity holds common stock, the tax treatment of a partner or member in the other entity will generally depend on the status of the partner or member and upon the activities of the partnership or other entity. Accordingly, we urge partnerships or other pass-through entities which hold our common stock and partners or members in these partnerships or other entities to consult their tax advisors.

        This discussion assumes that non-United States holders will hold our common stock issued pursuant to the offering as a capital asset (generally, property held for investment). This discussion does not address all aspects of United States federal income taxation that may be relevant in light of a non-United States holder's special tax status or special tax situations. United States expatriates, insurance companies, tax-exempt organizations and governments, dealers in securities or currency, banks or other financial institutions, investors whose functional currency is other than the United States dollar and investors that hold common stock as part of a hedge, straddle or risk-reduction transaction are among those categories of potential investors that are subject to special rules not covered in this discussion. This discussion does not address any tax consequences arising under the laws of any state, local or non-United States taxing jurisdiction. Furthermore, the following discussion is based on current provisions of the Internal Revenue Code, and Treasury Regulations and administrative and judicial interpretations thereof, all as in effect on the date hereof, and all of which are subject to change, possibly with retroactive effect. Accordingly, we urge each non-United States Holder to consult a tax advisor regarding the United States federal, state, local and non-United States income and other tax consequences of acquiring, holding and disposing of shares of our common stock. Additionally, we have not sought any ruling from the Internal Revenue Service, or IRS, with respect to statements made and conclusions reached in this discussion, and there can be no assurance that the IRS will agree with these statements and conclusions.

Dividends

        We have not paid any dividends on our common stock and we do not plan to pay any dividends for the foreseeable future. However, if we do pay dividends on our common stock, those payments will constitute dividends for United States tax purposes to the extent paid from our current or accumulated earnings and profits, as determined under United States federal income tax principles. To the extent those dividends exceed our current or accumulated earnings and profits, the dividends will constitute a

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return of capital and will first reduce a holder's basis, but not below zero, and then will be treated as gain from the sale of stock.

        Any dividend (out of earnings and profits) paid to a non-United States holder of common stock generally will be subject to United States withholding tax either at a rate of 30% of the gross amount of the dividend or such lower rate as may be specified by an applicable tax treaty. In order to receive a reduced treaty rate, a non-United States holder must provide us with an IRS Form W-8BEN or other appropriate version of Form W-8 certifying qualification for the reduced rate.

        Dividends received by a non-United States holder that are effectively connected with a United States trade or business conducted by the non-United States holder are exempt from this withholding tax. In order to obtain this exemption, a non-United States holder must provide us with an IRS Form W-8ECI properly certifying this exemption. These effectively connected dividends, although not subject to withholding tax, are taxed at the same graduated rates applicable to United States persons, net of certain deductions and credits. In addition to the graduated tax described above, dividends received by a corporate non-United States holder that are effectively connected with a United States trade or business of the corporate non-United States holder may also be subject to a branch profits tax at a rate of 30% or such lower rate as may be specified by an applicable tax treaty.

        A non-United States holder of common stock that is eligible for a reduced rate of withholding tax pursuant to a tax treaty may obtain a refund of any excess amounts currently withheld if an appropriate claim for refund is filed with the IRS.

Gain on Disposition of Common Stock

        A non-United States holder generally will not be subject to United States federal income tax on any gain realized upon the sale or other disposition of our common stock unless:


Backup Withholding and Information Reporting

        Generally, we must report annually to the IRS the amount of dividends paid, the name and address of the recipient, and the amount, if any, of tax withheld. A similar report is sent to the holder. Pursuant to tax treaties or other agreements, the IRS may make its reports available to tax authorities in the recipient's country of residence.

        Payments of dividends or of proceeds on the disposition of stock made to a non-United States holder may be subject to backup withholding (currently at a rate of 26%) unless the non-United States holder establishes an exemption, for example, by properly certifying its non-United States status on a

85



Form W-8BEN or another appropriate version of Form W-8. Notwithstanding the foregoing, backup withholding may apply if either we or our paying agent has actual knowledge, or reason to know, that the holder is a United States person.

        Backup withholding is not an additional tax. Rather, the United States income tax liability of persons subject to backup withholding will be reduced by the amount of tax withheld. If withholding results in an overpayment of taxes, a refund may be obtained, provided that the required information is furnished to the IRS.

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SHARES ELIGIBLE FOR FUTURE SALE

        Immediately prior to this offering, there has been no public market for our common stock. Future sales of substantial amounts of common stock in the public market could adversely affect prevailing market prices. Furthermore, since only a limited number of shares will be available for sale shortly after this offering because of contractual and legal restrictions on resale described below, sales of substantial amounts of common stock in the public market after the restrictions lapse could adversely affect the prevailing market price and our ability to raise equity capital in the future.

        Based on the number of shares of common stock outstanding as of June 7, 2004, upon completion of this offering, 24,760,842 shares of common stock will be outstanding, assuming no exercise of the underwriters' over-allotment option and no exercise of options or warrants. All of the shares sold in this offering will be freely tradable. Except as set forth below, the remaining 18,760,842 shares of common stock outstanding after this offering will be restricted as a result of securities laws or lock-up agreements. These remaining shares will be available for sale in the public market roughly as follows:


Rule 144

        In general, under Rule 144 under the Securities Act as in effect on the date of this prospectus, a person who has beneficially owned shares of our common stock for at least one year would be entitled to sell within any three-month period a number of shares that does not exceed the greater of:

        Sales under Rule 144 are also subject to manner of sale provisions and notice requirements and to the availability of current public information about us.

Rule 144(k)

        Under Rule 144(k) of the Securities Act as in effect on the date of this prospectus, a person who is not deemed to have been one of our affiliates at any time during the 90 days preceding a sale, and who has beneficially owned the shares proposed to be sold for at least two years, including the holding period of any prior owner other than an affiliate, is entitled to sell the shares without complying with the manner of sale, public information, volume limitation or notice provisions of Rule 144. 6,089,143 shares of our common stock will qualify for resale under Rule 144(k) within 180 days of the date of this prospectus.

Rule 701

        Rule 701 under the Securities Act as in effect on the date of this prospectus, permits resales of shares in reliance upon Rule 144 but without compliance with certain restrictions of Rule 144, including the holding period requirement. Most of our employees, officers, directors or consultants who

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purchased shares under a written compensatory plan or contract may be entitled to rely on the resale provisions of Rule 701, but all holders of Rule 701 shares are required to wait until 90 days after the date of this prospectus before selling their shares. However, substantially all Rule 701 shares are subject to lock-up agreements as described below and under "Underwriting" and will become eligible for sale at the expiration of those agreements.

Lock-Up Agreements

        We, along with our directors, executive officers and substantially all of our stockholders, optionholders and warrantholders, have agreed with the underwriters that for a period of 180 days following the date of this prospectus, we or they will not offer, sell, assign, transfer, pledge, contract to sell or otherwise dispose of or hedge any shares of our common stock or any securities convertible into or exchangeable for shares of our common stock, subject to specified exceptions. Citigroup Global Markets Inc. may, in its sole discretion, at any time without prior notice, release all or any portion of the shares from the restrictions in any such agreement. Factors in deciding whether to release shares may include the length of time before the lock-up expires, the number of shares involved, the reason for the release, market conditions and the trading price of our common stock and whether the person seeking the release is an officer, director or affiliate of Senomyx. There are no agreements between Citigroup and any of our stockholders, optionholders or affiliates releasing them from these lock-up agreements prior to the expiration of the 180-day period.

Registration Rights

        Upon completion of this offering, the holders of 15,214,719 shares of our common stock and warrants to purchase 14,285 shares of our common stock will be entitled to rights with respect to the registration of their shares under the Securities Act, subject to the 180-day lock-up arrangement described above. Registration of these shares under the Securities Act would result in the shares becoming freely tradable without restriction under the Securities Act, except for shares purchased by affiliates, immediately upon the effectiveness of this registration. Any sales of securities by these stockholders could have a material adverse effect on the trading price of our common stock. See "Description of Capital Stock—Registration Rights."

Equity Incentive Plans

        We intend to file with the SEC a registration statement under the Securities Act covering the shares of common stock reserved for issuance under our amended and restated 2004 equity incentive plan, our 2004 non-employee directors' stock option plan, and our 2004 employee stock purchase plan. The registration statement is expected to be filed and become effective as soon as practicable after the completion of this offering. Accordingly, shares registered under the registration statement will be available for sale in the open market following its effective date, subject to Rule 144 volume limitations and the 180-day lock-up arrangement described above, if applicable.

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UNDERWRITING

        Citigroup Global Markets Inc., is acting as bookrunning manager of the offering, and, together with Deutsche Bank Securities Inc., Needham & Company, Inc. and First Albany Capital Inc. are acting as representatives of the underwriters named below. Subject to the terms and conditions stated in the underwriting agreement dated the date of this prospectus, each underwriter named below has agreed to purchase severally, and we have agreed to sell to that underwriter, the number of shares set forth opposite the underwriter's name at a public offering price less the underwriting discounts set forth on the cover page of this prospectus.

Underwriter

  Number
of shares

Citigroup Global Markets Inc.    
Deutsche Bank Securities Inc.      
Needham & Company, Inc.    
First Albany Capital Inc.    
     
     
     
   
  Total   6,000,000
   

        The underwriting agreement provides that the obligations of the underwriters to purchase the shares included in this offering are subject to approval of legal matters by counsel and to other conditions. The underwriters are obligated to purchase all the shares (other than those covered by the over-allotment option described below) if they purchase any of the shares.

        The underwriters propose to offer some of the shares directly to the public at the public offering price set forth on the cover page of this prospectus and some of the shares to dealers at the public offering price less a concession not to exceed $        per share. The underwriters may allow, and dealers may reallow, a concession not to exceed $        per share on sales to other dealers. If all of the shares are not sold at the initial offering price, the representatives may change the public offering price and the other selling terms. The representatives have advised us that the underwriters do not intend sales to discretionary accounts to exceed five percent of the total number of shares of our common stock offered by them.

        We have granted to the underwriters an option, exercisable for 30 days from the date of this prospectus, to purchase up to 900,000 additional shares of common stock at the public offering price less the underwriting discounts set forth on the cover page of this prospectus. The underwriters may exercise the option solely for the purpose of covering over-allotments, if any, in connection with this offering. To the extent the option is exercised, each underwriter must purchase, subject to conditions, a number of additional shares approximately proportionate to that underwriter's initial purchase commitment. If any additional shares of common stock are purchased, the underwriters will offer the additional shares on the same terms as those on which the shares included in the offering are being offered.

        We, along with our directors, executive officers and substantially all of our stockholders, optionholders and warrantholders, have agreed that, except with respect to shares of our common stock purchased through the directed share program described below, for a period of 180 days from the date of this prospectus, we and they will not, without the prior written consent of Citigroup, dispose of or hedge any shares of our common stock or any securities convertible into or exchangeable for our common stock, subject to certain exceptions. The exceptions permit our officers, directors and our other stockholders, optionholders and warrantholders, subject to certain conditions, to transfer their shares to family members or, for holders that are not individuals, to distribute their shares to their

89



partners, members or stockholders. Citigroup in its sole discretion may release any of the securities subject to these lock-up agreements at any time without notice. Factors in deciding whether to release shares may include the length of time before the lock-up expires, the number of shares involved, the reason for the release, market conditions and the trading price of our common stock and whether the person seeking the release is an officer, director or affiliate of Senomyx.

        At our request, Citigroup Global Markets Inc. have reserved up to 5% of the shares of common stock for sale at the initial public offering price to persons who are directors, officers or employees, or who are otherwise associated with us through a directed share program. The number of shares of common stock available for sale to the general public will be reduced by the number of directed shares purchased by participants in the program. Any directed shares not purchased will be offered by Citigroup Global Markets Inc. to the general public on the same basis as all other shares of common stock offered. Directors and executive officers purchasing directed shares will be restricted from disposing of any directed shares for a period of 180 days from the date of this prospectus without the prior written consent of Citigroup, subject to certain exceptions. All other purchasers of directed shares will be subject to similar restrictions, but for a period of 30 days from the date of this prospectus, rather than 180 days. We have agreed to indemnify Citigroup Global Markets Inc. against certain liabilities and expenses, including liabilities under the Securities Act, in connection with the sales of the directed shares.

        Prior to this offering, there has been no public market for our common stock. Consequently, the initial public offering price for the shares was determined by negotiations between us and the representatives. Among the factors considered in determining the initial public offering price were our record of operations, our current financial condition, our future prospects, our markets, the economic conditions in and future prospects for the industry in which we compete, our management and currently prevailing general conditions in the equity securities markets, including current market valuations of publicly traded companies considered comparable to our company. We cannot assure you, however, that the prices at which the shares will sell in the public market after this offering will not be lower than the initial public offering price or that an active trading market in our common stock will develop and continue after this offering.

        Our common stock has been approved for quotation on the Nasdaq National Market under the symbol "SNMX," subject to official notice of issuance.

        The following table shows the underwriting discounts and commissions that we are to pay to the underwriters in connection with this offering. These amounts are shown assuming both no exercise and full exercise of the underwriters' option to purchase additional shares of common stock.

 
  Paid by Senomyx, Inc.
 
  No Exercise
  Full Exercise
Per share   $                 $              
Total   $                 $              

        In connection with the offering, Citigroup on behalf of the underwriters, may purchase and sell shares of common stock in the open market. These transactions may include short sales, syndicate covering transactions and stabilizing transactions. Short sales involve syndicate sales of common stock in excess of the number of shares to be purchased by the underwriters in the offering, which creates a syndicate short position. "Covered" short sales are sales of shares made in an amount up to the number of shares represented by the underwriters' over-allotment option. In determining the source of shares to close out the covered syndicate short position, the underwriters will consider, among other things, the price of shares available for purchase in the open market as compared to the price at which they may purchase shares through the over-allotment option. Transactions to close out the covered syndicate short position involve either purchases of the common stock in the open market after the

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distribution has been completed or the exercise of the over-allotment option. The underwriters may also make "naked" short sales of shares in excess of the over-allotment option. The underwriters must close out any naked short position by purchasing shares of common stock in the open market. A naked short position is more likely to be created if the underwriters are concerned that there may be downward pressure on the price of the shares in the open market after pricing that could adversely affect investors who purchase in the offering. Stabilizing transactions consist of bids for or purchases of shares in the open market while the offering is in progress.

        The underwriters also may impose a penalty bid. Penalty bids permit the underwriters to reclaim a selling concession from a syndicate member when Citigroup repurchases shares originally sold by that syndicate member in order to cover syndicate short positions or make stabilizing purchases.

        Any of these activities may have the effect of preventing or retarding a decline in the market price of the common stock. They may also cause the price of the common stock to be higher than the price that would otherwise exist in the open market in the absence of these transactions. The underwriters may conduct these transactions on the Nasdaq National Market or in the over-the-counter market, or otherwise. If the underwriters commence any of these transactions, they may discontinue them at any time.

        We estimate that our portion of the total expenses of this offering will be $1,420,000.

        Certain of the underwriters may have performed investment banking and advisory services for us from time to time for which they would have received customary fees and expenses. The underwriters may, from time to time, engage in transactions with and perform services for us in the ordinary course of their business.

        A prospectus in electronic format may be made available on the websites maintained by one or more of the underwriters. The representatives may agree to allocate a number of shares to underwriters for sale to their online brokerage account holders. The representatives will allocate shares to underwriters that may make Internet distributions on the same basis as other allocations. In addition, shares may be sold by the underwriters to securities dealers who resell shares to online brokerage account holders.

        We have agreed to indemnify the underwriters against certain liabilities, including liabilities under the Securities Act, or to contribute to payments the underwriters may be required to make because of any of those liabilities.

91



LEGAL MATTERS

        Cooley Godward LLP, San Diego, California, will pass upon the validity of the common stock offered by this prospectus for us. As of the date of this prospectus, investment funds affiliated with Cooley Godward LLP beneficially own an aggregate of 17,142 shares of our common stock. Cleary, Gottlieb, Steen & Hamilton, New York, New York, will pass upon legal matters for the underwriters.


EXPERTS

        Ernst & Young LLP, independent registered public accounting firm, have audited our financial statements at December 31, 2002 and 2003, and for each of the three years in the period ended December 31, 2003, as set forth in their report. We have included our financial statements in the prospectus and elsewhere in the registration statement in reliance upon Ernst & Young LLP's report, given on their authority as experts in accounting and auditing.


WHERE YOU CAN FIND ADDITIONAL INFORMATION

        We have filed with the SEC a registration statement on Form S-1 under the Securities Act with respect to the shares of common stock being offered by this prospectus. This prospectus does not contain all of the information in the registration statement and its exhibits. For further information with respect to Senomyx and the common stock offered by this prospectus, we refer you to the registration statement and its exhibits. Statements contained in this prospectus as to the contents of any contract or any other document referred to are not necessarily complete, and in each instance, we refer you to the copy of the contract or other document filed as an exhibit to the registration statement. Each of these statements is qualified in all respects by this reference.

        Our SEC filings, including the registration statement of which this prospectus is a part, are available on the Internet at the SEC's website at http://www.sec.gov. You may also read and copy any document we file with the SEC at its public reference facilities at 450 Fifth Street, N.W., Washington, D.C. 20549. You may also obtain copies of these documents at prescribed rates by writing to the Public Reference Section of the SEC at 450 Fifth Street, N.W., Washington, D.C. 20549. Please call the SEC at 1-800-SEC-0330 for further information on the operation of the public reference facilities.

        Upon completion of this offering, we will be subject to the information reporting requirements of the Securities Exchange Act of 1934, as amended, and we will file reports, proxy statements and other information with the SEC. These reports, proxy statements and other information will be available for inspection and copying at the public reference room and web site of the SEC referred to above. We also maintain a website at http://www.senomyx.com, at which you may access these materials free of charge as soon as reasonably practicable after they are electronically filed with, or furnished to, the SEC. The information contained in, or that can be accessed through, our website is not part of this prospectus.

92




Senomyx, Inc.

Index to Financial Statements

 
   
Report of Independent Registered Public Accounting Firm   F-2
Balance Sheets as of December 31, 2002 and 2003 and March 31, 2004 (unaudited)   F-3
Statements of Operations for the years ended December 31, 2001, 2002 and 2003 and the three months ended March 31, 2003 and 2004 (unaudited)   F-4
Statements of Stockholders' Equity for the years ended December 31, 2001, 2002, and 2003 and the three months ended March 31, 2004 (unaudited)   F-5
Statements of Cash Flows for the years ended December 31, 2001, 2002, and 2003 and the three months ended March 31, 2003 and 2004 (unaudited)   F-7
Notes to Financial Statements   F-8

F-1



Report of Independent Registered Public Accounting Firm

To the Board of Directors of Senomyx, Inc.

        We have audited the accompanying balance sheets of Senomyx, Inc. as of December 31, 2002 and 2003, and the related statements of operations, stockholders' equity and cash flows for each of the three years in the period ended December 31, 2003. These financial statements are the responsibility of the Company's management. Our responsibility is to express an opinion on these financial statements based on our audits.

        We conducted our audits in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about whether the financial statements are free of material misstatement. An audit includes examining, on a test basis, evidence supporting the amounts and disclosures in the financial statements. An audit also includes assessing the accounting principles used and significant estimates made by management, as well as evaluating the overall financial statement presentation. We believe that our audits provide a reasonable basis for our opinion.

        In our opinion, the financial statements referred to above present fairly, in all material respects, the financial position of Senomyx, Inc. at December 31, 2002 and 2003 and the results of its operations and its cash flows for each of the three years in the period ended December 31, 2003, in conformity with U.S. generally accepted accounting principles.

    /s/   ERNST & YOUNG LLP         

San Diego, California
March 23, 2004,
except for Note 8, as to which the date is
June 7, 2004

 

 

 

F-2



Senomyx, Inc.

Balance Sheets

(In thousands, except share and per share data)

 
  December 31,
   
  Pro Forma
Stockholders'
Equity at
March 31, 2004

 
 
  March 31, 2004
 
 
  2002
  2003
 
 
   
   
  (Unaudited)

  (Unaudited)

 
Assets                          
Current assets:                          
  Cash and cash equivalents   $ 21,804   $ 13,493   $ 13,337        
  Investments available-for-sale     5,782     3,565     1,773        
  Other current assets     676     1,257     1,116        
   
 
 
       
Total current assets     28,262     18,315     16,226        

Property and equipment, net

 

 

3,590

 

 

2,125

 

 

2,083

 

 

 

 
Intangible assets, net     2,868                
Prepaid offering costs             357        
   
 
 
       
Total assets   $ 34,720   $ 20,440   $ 18,666        
   
 
 
       

Liabilities and stockholders' equity

 

 

 

 

 

 

 

 

 

 

 

 

 
Current liabilities:                          
  Accounts payable and accrued expenses   $ 2,121   $ 1,679   $ 2,283        
  Other current liabilities     54     61     70        
  Deferred revenue     2,566     1,415     1,341        
  Capital lease and loan obligations, net of discount     854                
   
 
 
       
Total current liabilities     5,595     3,155     3,694        

Capital lease and loan obligations, net of current portion and discount

 

 

906

 

 


 

 


 

 

 

 
Deferred rent         181     188        

Commitments

 

 

 

 

 

 

 

 

 

 

 

 

 
Stockholders' equity:                          
  Convertible preferred stock, $.001 par value; 37,079,311 shares authorized, 25,825,827 shares designated, 25,825,826 issued and outstanding at December 31, 2002 and 2003, and March 31, 2004; liquidation preference of $79,690     70,150     70,150     70,150      
  Common stock, $.001 par value, 51,495,732 shares authorized; 2,722,720, 2,830,349, and 3,463,082 shares issued and outstanding at December 31, 2002 and 2003, and March 31, 2004 (unaudited), respectively, 18,677,801 shares outstanding pro forma     3     3     3     19  
  Common stock issuable     3              
  Additional paid-in capital     5,574     20,172     21,535     91,669  
  Deferred compensation     (288 )   (8,540 )   (7,263 )   (7,263 )
  Accumulated other comprehensive income     6     1          
  Accumulated deficit     (47,229 )   (64,682 )   (69,641 )   (69,641 )
   
 
 
 
 
Total stockholders' equity     28,219     17,104     14,784   $ 14,784  
   
 
 
 
 
Total liabilities and stockholders' equity   $ 34,720   $ 20,440   $ 18,666        
   
 
 
       

See accompanying notes to financial statements.

F-3



Senomyx, Inc.

Statements of Operations

(In thousands, except share and per share data)

 
  Years Ended December 31,
  Three Months Ended March 31,
 
 
  2001
  2002
  2003
  2003
  2004
 
 
   
   
   
  (Unaudited)

  (Unaudited)

 
Revenue under collaborative agreements   $ 2,275   $ 7,327   $ 9,537   $ 2,203   $ 2,241  
Operating expenses:                                
  Research and development     16,263     17,635     16,802     4,002     3,950  
  General and administrative     4,952     4,154     4,096     1,275     1,010  
  Stock-based compensation:                                
    Research and development     1,240     540     1,293     248     593  
    General and administrative     378     158     4,997     30     1,687  
   
 
 
 
 
 
Total operating expenses     22,833     22,487     27,188     5,555     7,240  
   
 
 
 
 
 
Loss from operations     (20,558 )   (15,160 )   (17,651 )   (3,352 )   (4,999 )

Interest income

 

 

375

 

 

496

 

 

268

 

 

90

 

 

40

 
Interest expense     (46 )   (157 )   (70 )   (34 )    
   
 
 
 
 
 
Net loss   $ (20,229 ) $ (14,821 ) $ (17,453 ) $ (3,296 ) $ (4,959 )
   
 
 
 
 
 
Basic and diluted net loss per share   $ (12.35 ) $ (6.85 ) $ (7.16 ) $ (1.41 ) $ (1.88 )
   
 
 
 
 
 
Shares used to compute basic and diluted net loss per share     1,637,488     2,162,900     2,436,174     2,342,237     2,643,873  
   
 
 
 
 
 
Pro forma net loss per common share assuming conversion of preferred stock, basic and diluted               $ (0.99 )       $ (0.28 )
               
       
 
Shares used in computing pro forma net loss per common share assuming conversion of preferred stock, basic and diluted                 17,650,893           17,858,592  
               
       
 

See accompanying notes to financial statements.

F-4


Senomyx, Inc.

Statements of Stockholders' Equity

Years ended December 31, 2001, 2002 and 2003 and three months ended March 31, 2004

(In thousands, except share data)

 
  Preferred Stock
  Common Stock
   
   
   
   
   
   
 
 
  Common
Stock
Issuable

  Additional
Paid-in
Capital

  Deferred
Compensation

  Accumulated Other
Comprehensive
Income (Loss)

  Accumulated
Deficit

  Total
Stockholders'
Equity

 
 
  Shares
  Amount
  Shares
  Amount
 
Balance of December 31, 2000   13,122,812   $ 33,552   2,435,207   $ 2   $   $ 5,016   $ (2,452 ) $   $ (12,179 ) $ 23,939  
  Issuance of Series E Convertible preferred stock at $2.8999 per share for cash, net of issuance costs of $128   8,189,940     23,621                               23,621  
  Additional issuance costs for Series C and D convertible preferred stock and common stock       (26 )                             (26 )
  Issuance of common stock to employees related to the exercise of options         71,429             119                 119  
  Repurchase of common stock from employees         (28,509 )           (6 )               (6 )
  Issuance of warrants for equipment loan                     16                 16  
  Compensation related to restricted stock issued to consultants                     207                 207  
  Amortization of deferred compensation                         1,409             1,409  
  Reduction of deferred compensation for unvested employee common stock shares repurchased                     (47 )   47              
  Compensation related to common stock issuable related to license agreement                 4                     4  
  Compensation related to common stock issuable to consultant                 2                     2  
  Net loss and comprehensive loss                                 (20,229 )   (20,229 )
   
 
 
 
 
 
 
 
 
 
 
Balance at December 31, 2001   21,312,752     57,147   2,478,127     2     6     5,305     (996 )       (32,408 )   29,056  
  Issuance of Series E Convertible preferred stock at $2.8999 per share for cash, net of issuance costs of $85   4,513,074     13,003                               13,003  
  Issuance of common stock related to license agreement         2,286         (4 )   4                  
  Issuance of common stock to consultants         1,429         (2 )   2                  
  Issuance of common stock to employees related to the exercise of options         305,646     1         289                 290  
  Repurchase of common stock from employees         (64,768 )           (16 )                   (16 )
  Compensation related to restricted stock issued to consultants                     63                 63  
  Compensation related to common stock issuable related to license agreement                 3                     3  
  Amortization of deferred compensation                         635             635  
  Reduction of deferred compensation for unvested employee common stock shares repurchased                     (73 )   73              
  Comprehensive loss:                                                          
    Unrealized loss on investments                             6         6  
    Net loss                                 (14,821 )   (14,821 )
                                                     
 
  Comprehensive loss                                     (14,815 )
   
 
 
 
 
 
 
 
 
 
 
Balance at December 31, 2002   25,825,826     70,150   2,722,720     3     3     5,574     (288 )   6     (47,229 )   28,219  

F-5


 
  Preferred Stock
  Common Stock
   
   
   
   
   
   
 
 
  Common
Stock
Issuable

  Additional
Paid-in
Capital

  Deferred
Compensation

  Accumulated Other
Comprehensive
Income (Loss)

  Accumulated
Deficit

  Total
Stockholders'
Equity

 
 
  Shares
  Amount
  Shares
  Amount
 
Balance at December 31, 2002   25,825,826     70,150   2,722,720     3     3     5,574     (288 )   6     (47,229 )   28,219  
  Issuance of common stock related to license agreement         5,714         (3 )   3                  
  Issuance of common stock to employees related to the exercise of options         41,000             23                 23  
  Repurchase of common stock from employees         (33,371 )           (19 )               (19 )
  Compensation related to stock options granted to employees                     13,329     (13,329 )            
  Issuance of restricted stock to consultants for cash         94,286             49                 49  
  Compensation related to restricted stock issued to consultants                     1,253                 1,253  
  Amortization of deferred compensation                         5,037             5,037  
  Reduction of deferred compensation for unvested employee common stock shares repurchased                     (40 )   40              
  Comprehensive loss:                                                          
    Unrealized gain on investments                             (5 )       (5 )
    Net loss                                 (17,453 )   (17,453 )
                                                     
 
  Comprehensive loss                                     (17,458 )
   
 
 
 
 
 
 
 
 
 
 
Balance at December 31, 2003   25,825,826     70,150   2,830,349     3         20,172     (8,540 )   1     (64,682 )   17,104  
  Issuance of common stock to employees related to exercise of options (unaudited)         632,911             343                 343  
  Repurchase of common stock from consultants (unaudited)         (44,285 )           (24 )               (24 )
  Compensation related to stock options to employees (unaudited)                     426     (426 )            
  Compensation related to restricted stock issued to consultants (unaudited)                     577                 577  
  Issuance of common stock to consultants related to exercise of options (unaudited)         44,107             41                 41  
  Amortization of deferred compensation (unaudited)                         1,703             1,703  
  Comprehensive loss:                                                          
    Unrealized gain on investments (unaudited)                             (1 )       (1 )
    Net loss (unaudited)                                 (4,959 )   (4,959 )
                                                     
 
  Comprehensive loss                                     (4,960 )
   
 
 
 
 
 
 
 
 
 
 
Balance at March 31, 2004 (unaudited)   25,825,826   $ 70,150   3,463,082   $ 3   $   $ 21,535   $ (7,263 ) $   $ (69,641 ) $ 14,784  
   
 
 
 
 
 
 
 
 
 
 

See accompanying notes to financial statements.

F-6



Senomyx, Inc.

Statements of Cash Flows

(In thousands)

 
  Years Ended December 31,
  Three Months Ended
March 31,

 
 
  2001
  2002
  2003
  2003
  2004
 
 
   
   
   
  (Unaudited)

 
Operating activities                                
Net loss   $ (20,229 ) $ (14,821 ) $ (17,453 ) $ (3,296 ) $ (4,959 )
Adjustments to reconcile net loss to net cash used in operating activities:                                
  Depreciation and amortization     1,368     1,829     2,017     538     389  
  Common stock issued for license     4     3              
  Amortization of loan discount     2     5     8     1      
  Stock-based compensation for non-employees     209     63     1,253     162     577  
  Amortization of deferred compensation     1,409     635     5,037     116     1,703  
  Amortization of license fees     3,007     3,007     2,868     752      
  Change in operating assets and liabilities:                                
    Other assets     (402 )   77     (581 )   (380 )   (217 )
    Accounts payable, accrued expenses and other current liabilities     677     87     (435 )   (638 )   613  
    Deferred revenue     1,044     387     (1,151 )   1,028     (74 )
    Deferred rent             181     95     7  
   
 
 
 
 
 
Net cash used in operating activities     (12,911 )   (8,728 )   (8,256 )   (1,622 )   (1,961 )

Investing activities

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 
Purchases of property and equipment     (1,704 )   (2,370 )   (552 )   (178 )   (347 )
Purchases of investments     (27,770 )   (30,953 )   (9,715 )   (4,250 )    
Maturities of investments     35,047     25,177     11,927     4,276     1,792  
   
 
 
 
 
 
Net cash provided by (used in) investing activities     5,573     (8,146 )   1,660     (152 )   1,445  

Financing activities

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 
Proceeds from loans     1,250     1,580              
Repayment of loans     (157 )   (905 )   (1,768 )   (209 )    
Proceeds from issuance of preferred stock     23,595     13,003              
Proceeds from issuance of common stock     113     274     53     (4 )   360  
   
 
 
 
 
 
Net cash provided by (used in) financing activities     24,801     13,952     (1,715 )   (213 )   360  
   
 
 
 
 
 
Net increase (decrease) in cash and cash equivalents     17,463     (2,922 )   (8,311 )   (1,987 )   (156 )
Cash and cash equivalents at beginning of period     7,263     24,726     21,804     21,804     13,493  
   
 
 
 
 
 
Cash and cash equivalents at end of period   $ 24,726   $ 21,804   $ 13,493   $ 19,817   $ 13,337  
   
 
 
 
 
 

Supplemental disclosure of cash flow information:

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 
  Cash paid during the year for interest   $ 37   $ 147   $ 74   $ 34   $  
   
 
 
 
 
 

See accompanying notes to financial statements.

F-7



Senomyx, Inc.

Notes to Financial Statements

(Information as of March 31, 2004 and for the three

months ended March 31, 2003 and 2004 is unaudited)

1. Organization and Summary of Significant Accounting Policies

Organization and Business

        Senomyx, Inc. (the "Company") was incorporated on September 16, 1998 in Delaware and commenced operations in January 1999. The Company is a biotechnology company using proprietary taste receptor-based assay and screening technologies to discover and develop novel flavors and flavor enhancers for the packaged food and beverage industry. The Company has entered into product discovery and development collaborations with four of the world's leading packaged food and beverage companies: Campbell Soup Company ("Campbell Soup"), The Coca-Cola Company ("Coca-Cola"), Kraft Foods Global, Inc. ("Kraft Foods"), and Nestlé SA ("Nestlé"). The Company's collaboration agreements provide for research funding, milestone payments if the Company achieves development goals and royalties on future sales of consumer products incorporating our flavors and flavor enhancers. The Company currently has flavor programs focused on the development of savory, sweet and salt flavors or flavor enhancers.

Use of Estimates

        The preparation of financial statements in conformity with accounting principles generally accepted in the United States requires management to make estimates and assumptions that affect the reported amounts of assets and liabilities and disclosure of contingent assets and liabilities at the date of the financial statements and the reported amounts of revenues and expenses during the reporting period. Actual results could differ from those estimates.

Pro Forma Stockholders' Equity

        If an initial public offering contemplated by the prospectus is consummated under the terms presently anticipated, all shares of convertible preferred stock outstanding at December 31, 2003 will automatically convert into 15,214,719 shares of common stock. The unaudited pro forma stockholders' equity at March 31, 2004 reflects the effect of the preferred stock conversion.

Interim Financial Information

        The financial statements as of and for the three months ended March 31, 2003 and 2004 are unaudited. The unaudited financial statements have been prepared on the same basis as the audited financial statements and, in the opinion of management, include all adjustments, consisting only of normal recurring adjustments, necessary to state fairly the financial information therein. The results of operations for the three months ended March 31, 2004 are not necessarily indicative of the results that may be reported for the year ended December 31, 2004.

Cash and Cash Equivalents

        The Company considers all highly liquid investments with a remaining maturity of less than three months when purchased to be cash equivalents. Cash equivalents are recorded at cost, which approximates market value.

F-8



Investments Available-for-Sale

        The Company's surplus cash is invested in government agency bonds and United States Treasury securities with maturity dates of less than one year. The amortized cost of debt securities is adjusted for amortization of premiums and accretion of discounts to maturity with all amortization/accretion included in interest income. The Company's short-term investments are classified as available-for-sale and carried at estimated fair value, as determined by quoted market prices, with unrealized gains and losses reported in a separate component of accumulated other comprehensive income. Realized gains and losses and declines in value judged to be other-than-temporary, if any, on available-for-sale securities are included in investment income. The cost of securities sold is based on the specific identification method. Interest on securities classified as available-for-sale is included in interest income.

Fair Value of Financial Instruments

        The carrying amount of cash and cash equivalents, investments available-for-sale, accounts payable and accrued expenses are considered to be representative of their respective fair value because of the short-term nature of those items.

Concentration of Credit Risk and Major Collaborations

        Financial instruments, which potentially subject the Company to concentrations of credit risk, consist of cash, cash equivalents and investments available-for-sale. The Company limits its exposure to credit loss by placing its cash, cash equivalents, and investments with high credit quality financial institutions in instruments with short maturities.

        The Company derives its revenues from a relatively small number of collaborators. For the year ended December 31, 2001, revenues from two collaborators accounted for 60% and 40%, respectively, of total revenues. For the year ended December 31, 2002, revenues from four collaborators accounted for 31%, 23%, 27% and 19%, respectively, of total revenues. For the year ended December 31, 2003, revenues from four collaborators accounted for 22%, 28%, 28% and 22%, respectively, of total revenues. For the three months ended March 31, 2004 and 2003 revenues from four collaborators accounted for 36%, 22%, 16% and 26% and 26%, 23%, 25% and 26%, respectively, of total revenues.

Property and Equipment

        Property and equipment are stated at cost less accumulated depreciation and are depreciated over the estimated useful lives of the assets (ranging from three to five years) using the straight-line method. Leasehold improvements are amortized over the estimated useful life of the asset or the lease term, whichever is shorter.

Patent Costs

        Costs related to filing and pursuing patent applications are expensed as incurred, as recoverability of such expenditures is uncertain.

F-9



Intangible Assets

        The Company amortizes intangible assets over their estimated useful lives. To date, the intangible assets have consisted of certain technology and databases acquired from Aurora Biosciences Corporation ("Aurora") and Incyte Genomics, Inc. ("Incyte") which were amortized to research and development expense over three years. As of December 31, 2003, the intangible assets are fully amortized.

Impairment of Long-Lived Assets

        In accordance with Statement of Financial Accounting Standards ("SFAS") No. 144, Accounting for the Impairment or Disposal of Long-Lived Assets , if indicators of impairment exist, the Company assesses the recoverability of the affected long-lived assets by determining whether the carrying value of such assets can be recovered through undiscounted future operating cash flows. If impairment is indicated, the Company measures the amount of such impairment by comparing the fair value to the carrying value. There have been no indicators of impairment through December 31, 2003.

Revenue Recognition

        The Company's revenue recognition policies are in compliance with the Staff Accounting Bulletin ("SAB") No. 101, Revenue Recognition in Financial Statements and Emerging Issues Task Force ("EITF") Issue 00-21, Revenue Arrangements with Multiple Deliverables . Revenue is deferred for fees received before earned. Some of the Company's agreements contain multiple elements, including research funding, milestones and royalties.

        Revenue from milestones is recognized when earned, as evidenced by written acknowledgment from the collaborator or other persuasive evidence that the milestone has been achieved, provided that (i) the milestone event is substantive and its achievability was not reasonably assured at the inception of the agreement, and (ii) the Company's performance obligations after the milestone achievement will continue to be funded by the collaborator at a level comparable to before the milestone achievement. If both of these criteria are not met, the milestone payment is recognized over the remaining minimum period of the Company's performance obligations under the agreement. Non-refundable upfront fees, if any, not associated with future Company performance, will be recognized when received. Amounts received for research funding are recognized as revenues as the services are performed. Royalties to be received based on product sales made by our collaborators incorporating our product, if any, will be recognized as earned. To date, the Company has not earned any royalties.

Research and Development

        Research and development costs, including those incurred in relation to the Company's collaborative agreements, are expensed in the period incurred. Research and development costs primarily consist of salaries and related expenses for personnel, facilities and depreciation, research and development supplies, patents and licenses and outside services. The Company has licensed certain technology and databases used in its collaborative agreements, which have been capitalized in

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accordance with SFAS No. 2, Accounting for Research and Development Costs , and amortized to research and development expense over their estimated useful lives.

Comprehensive Income (Loss)

        SFAS No. 130, Reporting Comprehensive Income , requires that all components of comprehensive income, including net income, be reported in the financial statements in the period in which they are recognized. Comprehensive income (loss) is defined as the change in equity during a period from transactions and other events and circumstances from non-owner sources. The Company's accumulated other comprehensive income (loss), as of December 31, 2002 and 2003 and March 31, 2004, consisted of unrealized gains and losses on investments available-for-sale and is reported in stockholders' equity.

Deferred Rent

        Rent expense is recorded on a straight-line basis over the term of the lease. The difference between rent expense accrued and amounts paid under the lease agreement is recorded as deferred rent in the accompanying balance sheets.

Stock-Based Compensation

        As permitted by SFAS No. 123, Accounting for Stock-Based Compensation , the Company has elected to follow Accounting Principles Board Opinion No. 25, Accounting for Stock Issued to Employees ("APB 25"), and related interpretations in accounting for its employee stock options. Under APB 25, when the purchase price of restricted stock or the exercise price of the Company's employee stock options equals or exceeds the fair value of the underlying stock on the date of issuance or grant, no compensation expense is recognized. In conjunction with the Company's initial public offering contemplated by the prospectus, the Company reviewed its historical exercise prices through March 31, 2004 and, as a result, revised the estimate of fair value for all stock options granted subsequent to January 1, 2003. With respect to these options granted, the Company has recorded deferred stock compensation of $13.3 million during the year ended December 31, 2003 and $426,000 during the three months ended March 31, 2004 for the difference between the original exercise price per share determined by the Board of Directors and the revised estimate of fair value per share at the respective grant dates. The weighted average exercise price for the 1,227,290 options granted to the Company's employees subsequent to January 1, 2003 was $0.53 with a weighted average revised fair value per share of $11.73. Deferred stock compensation is recognized and amortized on an accelerated basis in accordance with Financial Accounting Standards Board Interpretation ("FIN") No. 28, Accounting for Stock Appreciation Rights and Other Variable Stock Option or Award Plans , over the vesting period of the related options, generally four years.

        Options or stock awards issued to non-employees are recorded at their fair value in accordance with SFAS No. 123, Accounting for Stock-Based Compensation , and EITF No. 96-18, Accounting for Equity Instruments That Are Issued to Other Than Employees for Acquiring or in Conjunction with Selling Goods or Services , and are periodically revalued as the options vest and are recognized as expense over the related service period. The Company granted stock options and stock awards to non-employees as

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follows: 78,568, 188,571, 136,569 and 28,571 for the years ended December 31, 2001, 2002, 2003 and the three months ended March 31, 2004, respectively. Compensation expense related to non-employee stock option grants and stock awards was $209,000, $63,000, $1.3 million, $162,000 and $577,000 for the years ended December 31, 2001, 2002, 2003 and the three months ended March 31, 2003 and 2004, respectively. The options were valued using the Black-Scholes option pricing model with the following weighted-average assumptions for the years ended December 31, 2001, 2002, 2003 and the three months ended March 31, 2003 and 2004: (a) risk free interest rates of 4.0%, 3.0%, 3.0%, 3.0% and 3.0%, respectively; (b) dividend yield of 0%, (c) expected volatility of 70%; and (d) expected life of five years for all periods.

        As required under SFAS No. 123, the pro forma effects of employee stock-based compensation on net loss are estimated at the date of grant using the Black-Scholes option-pricing model. The Black-Scholes option valuation model was developed for use in estimating the fair value of traded options that have no vesting restrictions and are fully transferable. Because the Company's employee stock options have characteristics significantly different from those of traded options, and because changes in the subjective input assumptions can materially affect the fair value estimate, in management's opinion, the existing models do not necessarily provide a reliable single measure of the fair value of its employee stock options.

        The fair value of options issued to employees was estimated at the date of grant using the Black-Scholes option valuation model with the following weighted average assumptions for the years ended December 31, 2001, 2002, 2003 and the three months ended March 31, 2003 and 2004: (a) risk-free interest rate of 4.0%, 3.0%, 3.0%, 3.0% and 3.0%, respectively; (b) expected dividend yield of 0%; (c) volatility factor of 70%; and (d) five-year estimated life of the options. The estimated weighted average fair value of stock options granted during 2001, 2002, 2003 and the three months ended March 31, 2003 and 2004 was $1.07, $0.32, $11.24, $8.84 and $14.58, respectively.

        For purposes of pro forma disclosures, the estimated fair value of the options is amortized to expense over the vesting period of the related options. The Company's pro forma information follows (in thousands, except per share data):

 
  Years ended December 31,
  Three months ended March 31,
 
 
  2001
  2002
  2003
  2003
  2004
 
Net loss as reported   $ (20,229 ) $ (14,821 ) $ (17,453 ) $ (3,296 ) $ (4,959 )
Add: Stock-based employee compensation expense included in net loss     1,409     635     5,037     116     1,703  
Deduct: Stock-based employee compensation expense determined under fair value method     (342 )   (436 )   (5,120 )   (116 )   (1,731 )
   
 
 
 
 
 
Pro forma net loss   $ (19,162 ) $ (14,622 ) $ (17,536 ) $ (3,296 ) $ (4,987 )
   
 
 
 
 
 
Basic and diluted net loss per share as reported   $ (12.35 ) $ (6.85 ) $ (7.16 ) $ (1.41 ) $ (1.88 )
   
 
 
 
 
 
Pro forma basic and diluted net loss per share   $ (11.70 ) $ (6.76 ) $ (7.20 ) $ (1.41 ) $ (1.89 )
   
 
 
 
 
 

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Net Loss Per Share

        The Company calculated net loss per share in accordance with SFAS No. 128, Earnings Per Share , and SAB No. 98. Basic earnings per share ("EPS") is calculated by dividing the net income or loss by the weighted average number of common shares outstanding for the period, without consideration for common stock equivalents. Diluted EPS is computed by dividing the net income or loss by the weighted average number of common share equivalents outstanding for the period determined using the treasury-stock method. For purposes of this calculation, common stock subject to repurchase by the Company, convertible preferred stock, options, and warrants are considered to be common stock equivalents and are only included in the calculation of diluted earnings per share when their effect is dilutive. Under the provisions of SAB No. 98, common shares issued for nominal consideration (as defined), if any, would be included in the per share calculations as if they were outstanding for all periods presented. No common shares have been issued for nominal consideration.

        The following table sets forth the computation of basic and diluted, and unaudited pro forma basic and diluted, net loss per share for the respective periods. The unaudited pro forma basic and diluted net loss per share represent the weighted average common shares outstanding reduced by the weighted average unvested common shares subject to repurchase, and gives the effect to the conversion of the convertible preferred stock into shares of common stock as if converted at the date of original issuance.

 
  Year ended December 31,
  Three Months Ended March 31,
 
 
  2001
  2002
  2003
  2003
  2004
 
Historical:                                
Net loss   $ (20,229 ) $ (14,821 ) $ (17,453 ) $ (3,296 ) $ (4,959 )
   
 
 
 
 
 
Denominator:                                
  Weighted average common shares     2,493,140     2,647,648     2,766,287     2,722,662     2,926,061  
  Weighted average unvested common shares subject to repurchase     (855,652 )   (484,748 )   (330,113 )   (380,425 )   (282,188 )
   
 
 
 
 
 
  Denominator for basic and diluted earnings per share     1,637,488     2,162,900     2,436,174     2,342,237     2,643,873  
   
 
 
 
 
 
Basic and diluted net loss per share   $ (12.35 ) $ (6.85 ) $ (7.16 ) $ (1.41 ) $ (1.88 )
   
 
 
 
 
 
Pro forma:                                
Pro forma net loss               $ (17,453 )       $ (4,959 )
               
       
 
Pro forma basic and diluted net loss per share               $ (0.99 )       $ (0.28 )
               
       
 
Shares used above                 2,436,174           2,643,873  
Pro forma adjustment to reflect assumed weighted average effect of conversion of preferred stock                 15,214,719           15,214,719  
               
       
 
Pro forma shares used to compute basic and diluted net loss per share                 17,650,893           17,858,592  
               
       
 

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  Year ended December 31,
  Three Months ended March 31,
 
  2001
  2002
  2003
  2003
  2004
Historical outstanding antidilutive securities not included in diluted net loss per share calculation                    
Preferred stock*   12,509,426   15,214,719   15,214,719   15,214,719   15,214,719
Common stock subject to repurchase   555,263   416,150   296,734   351,107   622,394
Options to purchase common stock   887,085   884,728   1,967,278   843,554   1,340,495
Warrants   14,285   14,285   14,285   14,285   14,285
   
 
 
 
 
    13,966,059   16,529,882   17,493,016   16,423,665   17,191,893
   
 
 
 
 

*
Represents the number of shares of common stock into which preferred stock was convertible.

Effect of New Accounting Standards

        In November 2002, the FASB Emerging Issues Task Force issued its consensus concerning Revenue Arrangements with Multiple Deliverables ("EITF 00-21"). EITF 00-21 addresses how to determine whether a revenue arrangement involving multiple deliverables should be divided into separate units of accounting, and, if separation is appropriate, how the arrangement consideration should be measured and allocated to the identified accounting units. EITF 00-21 is effective for revenue arrangements entered into in fiscal periods beginning after June 15, 2003. The adoption of EITF 00-21 did not have a material impact on our financial statements.

        In December 2002, the FASB issued SFAS No. 148, Accounting for Stock-Based Compensation—Transition and Disclosure . SFAS No. 148 is an amendment to SFAS No. 123 providing alternative methods of transition for a voluntary change to the fair value based method of accounting for stock-based employee compensation and also provides additional disclosures about the method of accounting for stock-based employee compensation. SFAS No. 148 is effective for financial statements for the Company beginning January 1, 2003. The Company has currently chosen not to adopt the voluntary change to the fair value based method of accounting for stock-based employee compensation. If the Company should choose to adopt such a method, its implementation pursuant to SFAS No. 148 could have a material effect on the Company's financial position and results of operations.

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2. Balance Sheet Details

Investments Available-for-Sale

        The following is a summary of investments available-for-sale securities at December 31, 2002 (in thousands):

 
  Amortized Cost
  Unrealized Gain
  Unrealized Loss
  Estimated
Fair Value

Government Agency Bonds   $ 2,693   $ 3   $   $ 2,696
United States Treasury Securities     2,986     3         2,989
Certificate of Deposit     97             97
   
 
 
 
    $ 5,776   $ 6   $   $ 5,782
   
 
 
 

        The following is a summary of investments available-for-sale securities at December 31, 2003
(in thousands):

 
  Amortized Cost
  Unrealized Gain
  Unrealized Loss
  Estimated
Fair Value

Government Agency Bonds   $ 2,792   $ 1   $   $ 2,793
United States Treasury Securities     772             772
   
 
 
 
    $ 3,564   $ 1   $   $ 3,565
   
 
 
 

        The following is a summary of investments available-for-sale securities at March 31, 2004
(in thousands): (unaudited)

 
  Amortized Cost
  Unrealized Gain
  Unrealized Loss
  Estimated
Fair Value

Government Agency Bonds   $ 999   $   $   $ 999
United States Treasury Securities     774             774
   
 
 
 
    $ 1,773   $   $   $ 1,773
   
 
 
 

        Gross realized gains and losses on available-for-sale securities were immaterial during the years ended December 31, 2002 and 2003 and the three months ended March 31, 2003 and 2004. All of the available-for-sale securities have a contractual maturity at March 31, 2004 of one year or less.

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Property and Equipment

        Property and equipment consists of the following (in thousands):

 
  December 31,
   
 
 
  March 31, 2004
 
 
  2002
  2003
 
Scientific equipment   $ 4,968   $ 5,158   $ 5,186  
Computer equipment     1,516     1,711     1,869  
Furniture and fixtures     213     223     233  
Leasehold improvements     439     587     738  
   
 
 
 
      7,136     7,679     8,026  
Less accumulated depreciation and amortization     (3,546 )   (5,554 )   (5,943 )
   
 
 
 
    $ 3,590   $ 2,125   $ 2,083  
   
 
 
 

        Depreciation and amortization expense was $1.4 million, $1.8 million, $2.0 million, $538,000 and $389,000 for the years ended December 31, 2001, 2002 and 2003 and for the three months ended March 31, 2003 and 2004, respectively.

Accounts Payable and Accrued Expenses

        Accounts payable and accrued expenses consists of the following (in thousands):

 
  December 31,
   
 
  March 31, 2004
 
  2002
  2003
Accounts payable   $ 765   $ 372   $ 981
Accrued empoyee benefits     1,034     906     611
Other accrued liabilities     322     401     691
   
 
 
    $ 2,121   $ 1,679   $ 2,283
   
 
 

3. Product Discovery and Development Collaborations

        Campbell Soup Company.     In March 2001, the Company entered into a collaboration agreement with Campbell Soup to work for a three-year collaborative period for the discovery and development of specified flavors and flavor enhancers. The agreement requires Campbell Soup to make research funding payments over three years totaling $3.6 million. The Company is also eligible to receive milestone payments upon the achievement of a specific product development goal and, in the event of commercialization, receive royalties on future net sales of collaborator products containing a discovered ingredient.

        The agreement was amended in July 2002 to provide for an option to negotiate the right to expand the field to include additional specified products. The Company received $1.8 million from Campbell

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Soup for the option, which was recorded as deferred revenue and recognized as revenue ratably over the remaining term of the agreement (20 months). The agreement was further amended in November 2002 to redefine earned royalties during the royalty term.

        In July 2003, the Company received $650,000 in additional research support funding and expense reimbursement. The payment was recorded as deferred revenue and is being recognized as revenue ratably over the remaining term of the agreement (eight months).

        The agreement was further amended in March 2004 to extend the collaborative period until the earlier of March 2006 or when a flavor or flavor enhancer selected by Campbell's receives Generally Recognized as Safe determination, subject to earlier termination under specified circumstances. Under the terms of the extension, the Company will provide additional research and receive additional research funding totaling $3.0 million for two additional years.

        To date, the Company has received $6.7 million in research and development funding. If all milestones are achieved, and including all research and development funding paid or payable, the Company may be entitled to payments which total up to $10.1 million. There is no guarantee that the Company will receive any milestone payments or royalties under this collaboration.

        The Coca-Cola Company.     In April 2002, the Company entered into a collaboration agreement with Coca-Cola for the discovery and development of specified flavors and flavor enhancers. The agreement requires Coca-Cola to make research funding payments over three years totaling $6.0 million. The Company is also eligible to receive milestone payments upon the achievement of specific product development goals and, in the event of commercialization, receive royalties on future sales of collaborator products containing a discovered ingredient.

        The agreement was amended in April 2004 to extend the collaborative period until April 2008, subject to earlier termination under specified circumstances. Under terms of the extension, the Company will provide additional research and receive additional research funding totaling $6.0 million for three additional years.

        To date, the Company has received $4.0 million in research and development funding. If all milestones are achieved, and including all research and development funding paid or payable, the Company may be entitled to payments which total up to $14.8 million. There is no guarantee that the Company will receive any milestone payments or royalties under this collaboration.

        Kraft Foods Global, Inc.     In December 2000, the Company entered into a collaboration agreement with Kraft Foods for the discovery and development of flavor enhancers. Under the terms of the collaboration, Kraft Foods agreed to pay research funding of approximately $1.4 million per year for three years. In May 2002, the agreement was amended to provide for an additional collaborative program. The level of research support under the original program was reduced from $1.4 million to $1.1 million per year for the remainder of the research term. The Company is eligible to receive milestone payments upon the achievement of specific product development goals and, in the event of commercialization, receive royalties on future net sales of collaborator products containing a discovered ingredient.

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        Kraft Foods agreed to make research funding payments related to the additional program of $1.8 million over the period from May 2002 through December 2003 and $1.8 million over the period from January 2004 through May 2005. The research effort approximates the funding levels. The Company is also eligible to receive milestone payments upon the achievement of specific product development goals and receive royalties on net sales of collaborator products containing a discovered ingredient related to this additional program. The Company earned a milestone in 2002 from the additional research program.

        To date, the Company has received $6.4 million in research and development funding and one milestone payment of $375,000. If all milestones are achieved, and including all research and development funding paid or payable, the Company may be entitled to payments which total up to $8.6 million. There is no guarantee that the Company will receive any further milestone payments or royalties under this collaboration.

        Nestlé.     In April 2002, the Company entered into a collaboration agreement with Nestlé for the discovery and development of specified flavors and flavor enhancers. The agreement requires Nestlé to make research funding payments over three years totaling $7.0 million. The Company is also eligible to receive milestone payments upon the achievement of specific product development goals and, in the event of commercialization, receive royalties on future net sales of collaborator products containing a discovered ingredient. In 2002 and 2003, the Company received payments for the achievement of two milestones.

        To date, the Company has received $5.2 million in research and development funding and three milestone payments of $375,000 each. If all milestones are achieved, and including all research and development funding paid or payable, the Company may be entitled to payments which total up to $9.6 million. There is no guarantee that the Company will receive any further milestone payments or royalties under this collaboration.

        In connection with the above listed collaboration agreements, the Company has recognized revenue of $2.3 million, $7.3 million and $9.5 million for the years ended December 31, 2001, 2002 and 2003, respectively, and $2.2 million and $2.2 million for the three months ended March 31, 2003 and 2004, respectively. As of December 31, 2002 and 2003 and as of March 31, 2004, the Company has deferred revenue of $2.6 million, $1.4 million and $1.3 million, respectively.

4. Technology Collaborations and License Agreements

        Aurora Biosciences Corporation.     In November 2000, the Company entered into a technology collaboration and license agreement with Aurora to develop certain assay technologies, which was amended in April 2002. Under the collaboration, Aurora employed its proprietary technologies to develop high-throughput screening assays for the Company. The agreement terminated in October 2002 and Invitrogen Corporation subsequently acquired certain surviving rights and obligations under this agreement. Under the surviving terms of the agreement, the Company maintains exclusive rights to use certain proprietary screening technologies with its taste receptor targets for the discovery of flavors and flavor enhancers. These exclusive rights are subject to rights granted under other current and future license agreements in connection with the purchase of certain screening systems, as well as Invitrogen's

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right to grant licenses under its proprietary technology to academic, government and other non-profit organizations. The Company paid a licensing fee of $2.5 million that was capitalized and amortized to research and development expense over the estimated useful life of three years. As of December 31, 2003, the license was fully amortized. The Company made cash research funding payments to Aurora totaling $4.7 million for development services provided from November 2000 through October 2002 and a $100,000 milestone payment following the delivery of specified assays for the discovery of flavor and fragrance molecules. All of these amounts were expensed when and as incurred in each accounting period. In addition, in November 2000, Aurora purchased 1,000,000 shares of the Company's Series C Convertible Preferred Stock for $4.8 million in cash. The Company recognized expense related to research funding and amortization of the license fee of $3.2 million, $2.8 million, $694,000, $208,000 and $0 for the years ended December 31, 2001, 2002 and 2003 and for the three months ended March 31, 2003 and 2004, respectively.

        Incyte Genomics, Inc.     In December 2000, the Company entered into a three-year agreement with Incyte that provided the Company with access to Incyte's databases for the identification of receptors that play a role in taste and smell in order to accelerate the Company's discovery of flavor and fragrance molecules. Under the terms of the agreement, the Company was required to pay $6.5 million for the databases. Concurrent with the signing of the agreement, Inctye agreed to purchase 869,328 shares of the Company's Series D Convertible Preferred Stock for $6.5 million. Since the amounts exchanged were equal, the Company accounted for the transaction as a non-monetary exchange in 2000. The Company capitalized the cost of the database and amortized the cost to research and development expense over the three-year term of the agreement. The value ascribed to the databases of $6.5 million was based on the fair value of the preferred stock issued. The Company recorded $2.2 million of amortization expense for each of the years ended December 31, 2001, 2002 and 2003, and $543,000 and $0 for the three months ended March 31, 2003 and 2004, respectively.

        The Company also has other license and research agreements, of which the Company recognized expenses of $502,000, $442,000, $934,000, $145,000 and $390,000 for the years ended December 31, 2001, 2002, 2003 and for the three months ended March 31, 2003 and 2004, respectively. The fees were charged to research and development expense.

5. Commitments

Leases and Loans

        The Company leases its primary office facility under an operating lease agreement that expires on December 31, 2006, subject to a five-year extension option by the Company. The lease provides for an annual minimum 3% rent increase. The Company has also entered into various operating lease agreements for office equipment. Gross rent expense for the years ended December 31, 2001, 2002 and 2003 was $2.4 million, $2.9 million, and $3.9 million, respectively and for the three months ended March 31, 2003 and 2004 was $864,000 and $969,000, respectively. The Company subleases part of the facility, and the sublease rental income for the years ended December 31, 2001, 2002 and 2003 was $827,000, $1.4 million and $1.4 million, respectively and for the three months ended March 31, 2003 and 2004 was $348,000 and $328,000, respectively. Sublease income is recorded as an offset to the Company's allocated facilities costs.

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        At December 31, 2003, estimated annual future minimum rental payments under the Company's operating leases for the years ending December 31 are as follows (in thousands):

 
  Operating
Leases

2004   $ 3,993
2005     4,111
2006     4,226
2007     1
   
Total minimum lease payments   $ 12,331
   

        Future minimum rentals to be received under non-cancelable subleases, which expire through 2005, total $711,000 and $182,000 for the years ended December 31, 2004 and 2005, respectively.

        In July 2001, the Company entered into a loan and security agreement with Silicon Valley Bank for loan disbursements up to $3.0 million on capital equipment purchases. From 2001 through 2003, the Company received advances totaling $2.6 million on the Silicon Valley Bank loan for capital equipment purchases. The advances accrued at 7.0% to 9.0%. In July 2003, the Company paid off the remaining principal portion of the equipment loans from Silicon Valley Bank in the amount of $1.3 million. In connection with the equipment loan, warrants to purchase up to 14,285 shares of common stock at $1.75 per share were issued to and are exercisable by Silicon Valley Bank. The estimated fair market value of the warrants of $16,000 was recorded as a discount on the equipment loan and was amortized to interest expense over the term of the equipment loan. The fair value was determined using the Black-Scholes Valuation Model.

        In connection with certain license and collaboration agreements, the Company's annual future minimum obligation payments are as follows, $113,000, $113,000, $56,000 $56,000 $18,000 for the years ending December 31, 2004, 2005, 2006, 2007 and 2008, respectively.

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6. Stockholders' Equity

Convertible Preferred Stock

        The authorized Convertible Preferred Stock by series at March 31, 2004 are as follows:

 
  Shares Authorized
  Shares Issued and Outstanding
  Issued and
Outstanding Shares of the
Aggregate Liquidation
Preferences

  Shares As If
Converted

Series A   8,648,158   8,648,158   $ 12,293,357   4,941,793
Series A-1   8,648,158        
Series B   2,605,326   2,605,326     10,029,724   1,660,406
Series B-1   2,605,326        
Series C   1,000,000   1,000,000     4,800,000   685,063
Series D   869,328   869,328     6,519,960   668,597
Series E   12,703,015   12,703,014     46,046,838   7,258,860
   
 
 
 
    37,079,311   25,825,826   $ 79,689,879   15,214,719
   
 
 
 

        The holders of all classes of Convertible Preferred Stock are entitled to receive annual cumulative dividends of 8% of the original issue price per share, when and if declared by the Board of Directors, prior and in preference to common stockholders. As of March 31, 2004, no dividends have been declared.

Conversion Features

        At the option of the holder, shares of Series A, B, C, D and E Convertible Preferred Stock are convertible into shares of common stock at stated rates, subject to adjustment for dilution. Shares of Series A, B, C and D Convertible Preferred Stock will automatically convert into shares of common stock upon the earlier of the closing of a qualified public offering of common stock under the Securities Act of 1933, as amended, in which the Company receives at least $15.0 million in gross proceeds at a price of at least $4.26 per share, or on the date specified by written consent or agreement of the holders of 66.7% of the then outstanding shares of Convertible Preferred Stock. Shares of Series E Convertible Preferred Stock will automatically convert into shares of common stock upon the earlier of the closing of a qualified public offering of common stock under the Securities Act of 1933, as amended, in which the Company receives at least $25.0 million in gross proceeds at a price of at least $8.70 per share, or on the date specified by written consent or agreement of the holders of 66.7% of the then outstanding shares of Convertible Preferred Stock.

Liquidation Preferences

        In the event of liquidation of the Company, holders of Series A, B, C, D and E Convertible Preferred Stock are entitled to a liquidation preference of $1.42, $3.85, $4.80, $7.50 and $3.62 per share, respectively, plus any declared and unpaid dividends on such shares. If, upon the occurrence of such event, the assets and funds of the Company shall be insufficient to make payment in full to all

F-21



holders of Convertible Preferred Stock, then such assets and funds shall be distributed to the holders of Convertible Preferred Stock ratably in proportion to the full amounts to which they would otherwise be entitled.

Voting

        The preferred stockholders of each share of Series A, B, C, D and E Convertible Preferred Stock shall have voting rights equal to the number of common shares they would own upon conversion.

Common Stock

        All of the outstanding shares of common stock have been issued to the founders, directors and employees of, and consultants to, the Company. In connection with certain stock purchase agreements, the Company has the option to repurchase, at the original issuance price, the unvested shares in the event of termination of employment or engagement. Shares under these agreements vest over periods up to four years. At March 31, 2004, 264,394 shares have been repurchased and 622,394 shares are subject to repurchase by the Company.

Warrants

        In 2001, in connection with equipment financing (see Note 5), the Company issued to Silicon Valley Bank warrants to purchase 14,285 shares of common stock at a price of $1.75 per share. The warrants expire five years from the closing of the sale and issuance of the Company's common stock in an initial public offering. All warrants were outstanding at March 31, 2004.

Equity Incentive Plan

        During 1999, the Company adopted the 1999 Equity Incentive Plan (the "Plan"), which provides for the grant of incentive and non-statutory stock options and restricted stock purchase rights to employees, directors and consultants of the Company. The Plan, as amended, authorizes the Company to issue up to 3,537,080 shares of common stock. At March 31, 2004, 630,938 shares remain available for grant under the Plan.

        The Plan allows the Company to grant restricted stock purchase rights at no less than 85% of the fair value of the Company's common stock as determined by the Board of Directors at the date of the grant. All restricted stock purchase rights vest in accordance with a vesting schedule determined by the Board of Directors, typically over a four-year period. The Company has an option to repurchase all unvested shares, at the original purchase price, upon the voluntary or involuntary termination of employment with, or consulting services provided to, the Company for any reason.

        Under the Plan, 640,171 restricted stock purchase rights have been granted at exercise prices ranging from $0.25 to $0.67 per share, all of which have been exercised as of March 31, 2004, of which 15,272 unvested shares are subject to repurchase. At March 31, 2004, the Company has repurchased a total of 169,617 shares under the Plan.

F-22



        Options granted under the Plan generally expire no later than ten years from the date of grant (five years for a 10% stockholder). Options generally vest and become fully exercisable over a period of five years, except for officers, directors and consultants that may be made fully exercisable. The exercise price of incentive stock options must be equal to at least the fair value of the Company's common stock on the date of grant, and the exercise price of non-statutory stock options may be no less than 85% of the fair value of the Company's common stock on the date of grant. The exercise price of any option granted to a 10% stockholder may be no less than 110% of the fair value of the Company's common stock on the date of grant.

        The following is a further breakdown of the options outstanding as of March 31, 2004:

 
   
  Options Outstanding
  Options Vested
and Exercisable

 
   
  Weighted
Average
Remaining
Contractual
Life

   
Range of Exercise
Prices

  Number of
Options

  Weighted
Average
Exercise
Price

  Number of
Options

  Weighted
Average
Exercise
Price

$ 0.25   18,568   6.3   $ 0.25   15,714   $ 0.25
$ 0.53   918,571   9.2   $ 0.53   22,693   $ 0.53
$ 0.67   81,405   6.5   $ 0.67   66,905   $ 0.67
$ 1.31   44,142   6.7   $ 1.31   34,021   $ 1.31
$ 1.75   277,809   7.0   $ 1.75   229,173   $ 1.75
     
           
     
      1,340,495   8.5         368,506      
     
           
     

F-23


        The following is a summary of stock option and stock award activity under the equity incentive plan through March 31, 2004:

 
  Number of
Shares

  Weighted Average
Exercise Price

Outstanding at December 31, 2000   188,281   $ 0.77
  Granted   790,215   $ 1.72
  Exercised   (71,429 ) $ 1.66
  Cancelled   (20,045 ) $ 1.68
   
     
Outstanding at December 31, 2001   887,022   $ 1.52
  Granted   552,346   $ 0.53
  Exercised   (305,646 ) $ 0.95
  Cancelled   (249,057 ) $ 1.61
   
     
Outstanding at December 31, 2002   884,665   $ 1.07
  Granted   1,244,715   $ 0.53
  Exercised   (41,000 ) $ 0.56
  Cancelled   (121,165 ) $ 1.07
   
     
Outstanding at December 31, 2003   1,967,215   $ 0.74
  Granted   53,429   $ 0.53
  Exercised   (677,018 ) $ 0.56
  Cancelled   (3,131 ) $ 1.37
   
     
Outstanding at March 31, 2004   1,340,495   $ 0.81
   
     

        The following shares of common stock are reserved for future issuance:

 
  March 31, 2004
Conversion of preferred stock   15,214,719
Common stock options granted and outstanding   1,340,495
Common stock options reserved for future grant   630,938
Warrants to purchase common stock   14,285
   
Total common stock shares reserved for future issuance   17,200,437
   

7. Income Taxes

        Significant components of the Company's net deferred tax assets at December 31, 2002 and 2003 are shown below (in thousands). A valuation allowance of $18.7 million and $23.4 million has been

F-24



established to offset the net deferred tax assets as of December 31, 2002 and 2003, respectively, as realization of such assets is uncertain.

 
  Years ended
December 31,

 
 
  2002
  2003
 
Deferred tax assets:              
  Net operating loss carryforwards   $ 14,075   $ 18,230  
  Research and development credits     1,804     1,995  
  Capitalized research and development     1,542     2,210  
  Deferred revenue     1,045     577  
  Other, net     228     339  
   
 
 
Total deferred tax assets     18,694     23,351  
   
 
 
Total deferred tax liabilities          
   
 
 
Net deferred tax assets              
Valuation allowance for deferred tax assets     (18,694 )   (23,351 )
   
 
 
  Net deferred tax assets   $   $  
   
 
 

        At December 31, 2003, the Company had federal and California tax net operating loss carryforwards of approximately $50.2 million and $11.7 million, respectively. The federal and California tax loss carryforwards will begin to expire in 2019 and 2009, respectively, unless previously utilized. The Company also had federal and California research and development tax credit carryforwards of approximately $1.3 million and $1.0 million, respectively, which will begin to expire in 2019 unless previously utilized.

        Pursuant to Internal Revenue Code Section 382 and 383, use of the Company's net operating loss and credit carryforwards may be limited if a cumulative change in ownership of more than 50% occurs within a three-year period.

8. Subsequent Events

Changes in Capitalization

        On April 30, 2004 our board of directors approved the following:

    A 4-for-7 reverse stock split of the outstanding common stock, which was effected on June 7, 2004. The accompanying financial statements give retroactive effect to the reverse stock split for all periods presented.

    Upon the effectiveness of the initial public offering contemplated by this prospectus, the filing of an amended and restated certificate of incorporation to provide for authorized capital stock of 120,000,000 shares of common stock and 7,500,000 shares of undesignated preferred stock;

    Upon the effectiveness of the initial public offering contemplated by this prospectus, the reservation of a total of 4,965,000 shares of common stock for the amended and restated 2004 equity incentive plan; and

    Upon the effectiveness of the initial public offering contemplated by this prospectus, the reservation of a total of 140,000 shares of common stock for the 2004 employee stock purchase plan.

F-25




6,000,000 Shares

Common Stock

LOGO


P R O S P E C T U S

                        , 2004


Citigroup
Deutsche Bank Securities
Needham & Company, Inc.
First Albany Capital





PART II

INFORMATION NOT REQUIRED IN PROSPECTUS

Item 13. Other Expenses of Issuance and Distribution.

        The following table sets forth all costs and expenses, other than underwriting discounts and commissions, payable by us in connection with the sale of the common stock being registered. All amounts shown are estimates except for the SEC registration fee, the NASD filing fee and the Nasdaq National Market filing fee.

 
  Amount to
be Paid

SEC registration fee   $ 13,113
NASD filing fee     16,025
Nasdaq National Market filing fee     100,000
Printing and engraving expenses     250,000
Legal fees and expenses     600,000
Accounting fees and expenses     400,000
Transfer agent and registrar fees and expenses     25,000
Miscellaneous expenses     15,862
   
  Total   $ 1,420,000
   

Item 14. Indemnification of Directors and Officers.

        We are incorporated under the laws of the State of Delaware. Section 145 of the Delaware General Corporation Law provides that a Delaware corporation may indemnify any persons who are, or are threatened to be made, parties to any threatened, pending or completed action, suit or proceeding, whether civil, criminal, administrative or investigative (other than an action by or in the right of such corporation), by reason of the fact that such person was an officer, director, employee or agent of such corporation, or is or was serving at the request of such person as an officer, director, employee or agent of another corporation or enterprise. The indemnity may include expenses (including attorneys' fees), judgments, fines and amounts paid in settlement actually and reasonably incurred by such person in connection with such action, suit or proceeding, provided that such person acted in good faith and in a manner he or she reasonably believed to be in or not opposed to the corporation's best interests and, with respect to any criminal action or proceeding, had no reasonable cause to believe that his or her conduct was illegal. A Delaware corporation may indemnify any persons who are, or are threatened to be made, a party to any threatened, pending or completed action or suit by or in the right of the corporation by reason of the fact that such person was a director, officer, employee or agent of such corporation, or is or was serving at the request of such corporation as a director, officer, employee or agent of another corporation or enterprise. The indemnity may include expenses (including attorneys' fees) actually and reasonably incurred by such person in connection with the defense or settlement of such action or suit provided such person acted in good faith and in a manner he or she reasonably believed to be in or not opposed to the corporation's best interests except that no indemnification is permitted without judicial approval if the officer or director is adjudged to be liable to the corporation. Where an officer or director is successful on the merits or otherwise in the defense of any action referred to above, the corporation must indemnify him or her against the expenses which such officer or director has actually and reasonably incurred. Our amended and restated certificate of incorporation and amended and restated bylaws, each of which will become effective upon the completion of this offering, provide for the indemnification of our directors and officers to the fullest extent permitted under the Delaware General Corporation Law.

II-1



        Section 102(b)(7) of the Delaware General Corporation Law permits a corporation to provide in its certificate of incorporation that a director of the corporation shall not be personally liable to the corporation or its stockholders for monetary damages for breach of fiduciary duties as a director, except for liability:

    for any transaction from which the director derives an improper personal benefit;

    for acts or omissions not in good faith or that involve intentional misconduct or a knowing violation of law;

    for improper payment of dividends or redemptions of shares; or

    for any breach of a director's duty of loyalty to the corporation or its stockholders.

        Our amended and restated certificate of incorporation and amended and restated bylaws include such a provision. Expenses incurred by any officer or director in defending any such action, suit or proceeding in advance of its final disposition shall be paid by us upon delivery to us of an undertaking, by or on behalf of such director or officer, to repay all amounts so advanced if it shall ultimately be determined that such director or officer is not entitled to be indemnified by us.

        Section 174 of the Delaware General Corporation Law provides, among other things, that a director, who willfully or negligently approves of an unlawful payment of dividends or an unlawful stock purchase or redemption, may be held liable for such actions. A director who was either absent when the unlawful actions were approved, or dissented at the time, may avoid liability by causing his or her dissent to such actions to be entered in the books containing minutes of the meetings of the board of directors at the time such action occurred or immediately after such absent director receives notice of the unlawful acts.

        As permitted by the Delaware General Corporation Law, we have entered into indemnity agreements with each of our directors and executive officers, that require us to indemnify such persons against any and all expenses (including attorneys' fees), witness fees, damages, judgments, fines, settlements and other amounts incurred (including expenses of a derivative action) in connection with any action, suit or proceeding, whether actual or threatened, to which any such person may be made a party by reason of the fact that such person is or was a director, an officer or an employee of us or any of our affiliated enterprises, provided that such person acted in good faith and in a manner such person reasonably believed to be in or not opposed to our best interests and, with respect to any criminal proceeding, had no reasonable cause to believe his or her conduct was unlawful. The indemnification agreements also set forth certain procedures that will apply in the event of a claim for indemnification thereunder.

        At present, there is no pending litigation or proceeding involving any of our directors or executive officers as to which indemnification is required or permitted, and we are not aware of any threatened litigation or proceeding that may result in a claim for indemnification.

        We have an insurance policy covering our officers and directors with respect to certain liabilities, including liabilities arising under the Securities Act or otherwise.

        We have entered into an underwriting agreement which provides that the underwriters are obligated, under some circumstances, to indemnify our directors, officers and controlling persons against specified liabilities, including liabilities under the Securities Act.

II-2



        Reference is made to the following documents filed as exhibits to this registration statement regarding relevant indemnification provisions described above and elsewhere herein:

Exhibit Document

  Number

Form of Underwriting Agreement

 

1.1

Form of Amended and Restated Certificate of Incorporation to be effective upon completion of this offering

 

3.1

Form of Amended and Restated Bylaws to be effective upon completion of this offering

 

3.2

Fourth Amended and Restated Investor Rights Agreement dated November 14, 2001, as amended February 27, 2002, between the Registrant and certain of its stockholders

 

4.3

Form of Indemnity Agreement

 

10.1

Item 15. Recent Sales of Unregistered Securities.

        The following list sets forth information regarding all securities sold by us since our incorporation in 1998 through June 8, 2004.

1.
Between February 1999 and September 1999, we sold an aggregate of 1,812,000 shares of common stock to 15 of our founders at a price per share of $0.00175 for aggregate consideration of $3,171.

2.
On February 1, 1999, we sold 17,142 shares of common stock to our corporate counsel at a price per share of $0.00175 for aggregate consideration of $30.

3.
Between August 1999 and September 1999, we sold an aggregate of 29,429 shares of common stock to six employees and scientific advisory board members at a price per share of $0.00175 for aggregate consideration of $52.

4.
On August 12, 1999, we sold 11,427 shares of common stock to a university as part of a license agreement at a price per share of $0.00175 for aggregate consideration of $20.

5.
On December 21, 1999, we sold 17,142 shares of common stock to a university as part of a license agreement at a price per share of $0.25 for aggregate consideration of $4,200.

6.
On March 7, 2000, we sold 2,857 shares of common stock to a university as part of a license agreement at a price per share of $0.25 for aggregate consideration of $700.

7.
On March 26, 2002, we sold 2,285 shares of common stock to a university as part of a license agreement at a price per share of $1.75 for aggregate consideration of $4,000.

8.
On January 31, 2003, we sold 5,714 shares of common stock to a university as part of a license agreement at a price per share of $0.53 for aggregate consideration of $3,000.

9.
On June 30, 2003, we sold 94,286 shares of common stock at a price per share of $0.53 for aggregate consideration of $49,500 to one accredited investor within the meaning of Rule 501(a) under the Securities Act.

10.
On October 1, 1999, we sold an aggregate of 8,648,158 shares of Series A preferred stock at a price per share of $1.42 for aggregate consideration of $12,293,357 to 23 accredited investors within the meaning of Rule 501(a) under the Securities Act.

11.
On August 10, 2000, we sold an aggregate of 2,605,326 shares of Series B preferred stock at a price per share of $3.85 for aggregate consideration of $10,029,724 to 18 accredited investors within the meaning of Rule 501(a) under the Securities Act.

II-3


12.
On November 9, 2000, we sold 1,000,000 shares of Series C preferred stock at a price per share of $4.80 for aggregate consideration of $4,800,000 to one accredited investor within the meaning of Rule 501(a) under the Securities Act.

13.
On January 9, 2001, we sold 869,328 shares of Series D preferred stock at a price per share of $7.50 for aggregate consideration of $6,519,960 to one accredited investor within the meaning of Rule 501(a) under the Securities Act.

14.
On July 17, 2001, we issued a warrant to purchase 14,285 shares of common stock having an exercise price of $1.75 per share to one accredited investor within the meaning of Rule 501(a) under the Securities Act. This warrant had a fair value of $15,750, using the Black-Scholes valuation model.

15.
On November 14, 2001, we sold an aggregate of 8,189,140 shares of Series E preferred stock at a price per share of $2.8999 for aggregate consideration of $23,750,007 to six accredited investors within the meaning of Rule 501(a) under the Securities Act.

16.
On February 27, 2002, we sold an aggregate of 4,513,074 shares of Series E preferred stock at a price per share of $2.8999 for aggregate consideration of $13,087,463 to seven accredited investors within the meaning of Rule 501(a) under the Securities Act.

17.
We granted 640,171 shares of restricted common stock to directors, employees and consultants under our amended and restated 2004 equity incentive plan at purchase prices ranging from $0.25 to $0.67 per share for aggregate consideration of $180,712. The shares of restricted stock do not include 71,429 shares issued upon the early exercise of options granted under our amended and restated 2004 equity incentive plan at exercise prices ranging from $0.53 to $1.75 per share.

18.
We granted options to purchase an aggregate of 2,966,144 shares of common stock, including options subsequently cancelled that then became available again for new option grants under our amended and restated 2004 equity incentive plan at exercise prices ranging from $0.25 to $6.50 per share. Of these, options to purchase 1,178,134 shares of common stock have been exercised for aggregate consideration of $867,577, at exercise prices ranging from $0.25 to $1.75 per share.

        The offers, sales and issuances of the above securities were deemed to be exempt from registration under the Securities Act in reliance on Section 4(2) of the Securities Act and/or Regulation D promulgated thereunder or Rule 701 promulgated under Section 3(b) of the Securities Act as transactions by an issuer not involving a public offering or transactions under compensatory benefit plans and contracts relating to compensation as provided under such Rule 701. The recipients of securities in each such transaction represented their intention to acquire the securities for investment only and not with a view to or for sale in connection with any distribution thereof and appropriate legends were affixed to the share certificates and warrants issued in such transactions. All recipients had adequate access, through employment or other relationships, to information about us.

        There were no underwriters employed in connection with any of the transactions set forth in this Item 15.

II-4


Item 16. Exhibits and Financial Statement Schedules.

(a)   Exhibits.

Exhibit
Number

  Description of Document
1.1   Form of Underwriting Agreement.
3.1   Form of Amended and Restated Certificate of Incorporation to be effective upon completion of this offering.
3.2   Form of Amended and Restated Bylaws to be effective upon completion of this offering.
4.1   Form of Common Stock Certificate.
4.2 (1) Warrant dated July 17, 2001, as amended November 14, 2001, issued to Silicon Valley Bank.
4.3 (1) Fourth Amended and Restated Investor Rights Agreement dated November 14, 2001, as amended February 27, 2002, between the Registrant and certain of its stockholders.
5.1   Opinion of Cooley Godward LLP.
10.1 + Form of Indemnity Agreement.
10.2 + Amended and Restated 2004 Equity Incentive Plan.
10.3 + Forms of Stock Option Agreements under the Amended and Restated 2004 Equity Incentive Plan.
10.4 + 2004 Employee Stock Purchase Plan and Form of Offering Document thereunder.
10.5 (1)+ Employment letter agreement dated February 21, 2000 between the Registrant and Mark Zoller, Ph.D.
10.6 (1)+ Employment letter agreement dated June 7, 2000 between the Registrant and Klaus Gubernator, Ph.D.
10.7 (1)+ Employment letter agreement dated June 2, 2003 between the Registrant and Kent Snyder.
10.8 (1)+ Employment letter agreement dated August 25, 2003 between the Registrant and Harry Leonhardt, Esq.
10.9 (1)+ Employment letter agreement dated September 8, 2003 between the Registrant and John Poyhonen.
10.10 (1) Expansion Lease dated November 20, 1995 between Health Science Properties, Inc. and Sequana Therapeutics, Inc., as amended, and Assignment and Assumption of Lease, dated July 12, 2000, as amended, between the Registrant and Axys Pharmaceuticals, Inc.
10.11 * Exclusive License and Bailment Agreement dated March 10, 2000 between the Registrant and the Regents of the University of California.
10.12 * Collaborative Research and License Agreement dated November 1, 2000, as amended April 16, 2002, between the Registrant and Aurora Biosciences Corporation.
10.13 * Collaborative Research and License Agreement dated December 6, 2000, as amended May 2, 2002, between the Registrant and Kraft Foods, Inc.
10.14 * Collaborative Research and License Agreement dated March 28, 2001, as amended July 26, 2002, November 5, 2002 and February 19, 2004 between the Registrant and Campbell Soup Company.
     

II-5


10.15 * Collaborative Research and License Agreement dated April 18, 2002, as amended October 23, 2003, between the Registrant and Nestec, Ltd.
10.16 * Collaborative Research, Development, Commercialization and License Agreement dated April 22, 2002, as amended April 7, 2004, between the Registrant and the Coca-Cola Company.
23.1   Consent of Ernst & Young LLP, independent registered public accounting firm.
23.2 Consent of Cooley Godward LLP. Reference is made to Exhibit 5.1.
24.1 (1) Power of Attorney. Reference is made to the signature page hereto.

+
Indicates management contract or compensatory plan.

*
Confidential treatment has been requested with respect to certain portions of this exhibit. Omitted portions have been filed separately with the Securities and Exchange Commission.

(1)
Previously filed.

(b)   Financial Statement Schedules.

        No financial statement schedules are provided because the information called for is not required or is shown either in the financial statements or the notes thereto.

Item 17. Undertakings.

        The undersigned Registrant hereby undertakes to provide to the underwriters at the closing specified in the Underwriting Agreement, certificates in such denominations and registered in such names as required by the underwriters to permit prompt delivery to each purchaser.

        Insofar as indemnification for liabilities arising under the Securities Act may be permitted to directors, officers and controlling persons of the Registrant pursuant to the foregoing provisions, or otherwise, the Registrant has been advised that in the opinion of the Securities and Exchange Commission such indemnification is against public policy as expressed in the Securities Act and is, therefore, unenforceable. In the event that a claim for indemnification against such liabilities (other than the payment by the Registrant of expenses incurred or paid by a director, officer or controlling person of the Registrant in the successful defense of any action, suit or proceeding) is asserted by such director, officer or controlling person in connection with the securities being registered, the Registrant will, unless in the opinion of its counsel the matter has been settled by controlling precedent, submit to a court of appropriate jurisdiction the question whether such indemnification by it is against public policy as expressed in the Securities Act and will be governed by the final adjudication of such issue.

        The undersigned Registrant hereby undertakes that:

            (1)   For purposes of determining any liability under the Securities Act, the information omitted from the form of prospectus filed as part of this Registration Statement in reliance upon Rule 430A and contained in a form of prospectus filed by the Registrant pursuant to Rule 424(b)(1) or (4) or 497(h) under the Securities Act shall be deemed to be part of this Registration Statement as of the time it was declared effective.

            (2)   For the purpose of determining any liability under the Securities Act, each post-effective amendment that contains a form of prospectus shall be deemed to be a new registration statement relating to the securities offered therein, and the offering of such securities at that time shall be deemed to be the initial bona fide offering thereof.

II-6



SIGNATURES

        Pursuant to the requirements of the Securities Act of 1933, the Registrant has duly caused this Amendment No. 4 to Registration Statement to be signed on its behalf by the undersigned, thereunto duly authorized, in the City of San Diego, State of California, on the 8th day of June, 2004.


 

 

SENOMYX, INC.

 

 

By:

 

/s/  
KENT SNYDER       
Kent Snyder
President and Chief Executive Officer

        Pursuant to the requirements of the Securities Act of 1933, this Amendment No. 4 to Registration Statement has been signed by the following persons in the capacities and on the dates indicated.

Signature
  Title
  Date
         

/s/  
KENT SNYDER       
Kent Snyder

 

President, Chief Executive Officer and Director (
Principal Executive Officer )

 

June 8, 2004

/s/  
JOHN POYHONEN           
John Poyhonen

 

Vice President and Chief Financial and Business Officer (
Principal Financial and Accounting Officer )

 

June 8, 2004

/s/  
MARK LESCHLY*       
Mark Leschly

 

Director

 

June 8, 2004

/s/  
LORI ROBSON, PH.D.*       
Lori Robson, Ph.D.

 

Director

 

June 8, 2004

/s/  
DAVID SCHNELL, M.D.*       
David Schnell, M.D.

 

Director

 

June 8, 2004

/s/  
TIMOTHY J. WOLLAEGER*       
Timothy J. Wollaeger

 

Director

 

June 8, 2004

/s/  
JAY M. SHORT*       
Jay M. Short, Ph.D.

 

Director

 

June 8, 2004
*By:   /s/   KENT SNYDER       
Kent Snyder
Attorney-in-fact
       


EXHIBIT INDEX

Exhibit
Number

  Description of Document

1.1

 

Form of Underwriting Agreement.

3.1

 

Form of Amended and Restated Certificate of Incorporation to be effective upon completion of this offering.

3.2

 

Form of Amended and Restated Bylaws to be effective upon completion of this offering.

4.1

 

Form of Common Stock Certificate.

4.2

(1)

Warrant dated July 17, 2001, as amended November 14, 2001, issued to Silicon Valley Bank.

4.3

(1)

Fourth Amended and Restated Investor Rights Agreement dated November 14, 2001, as amended February 27, 2002, between the Registrant and certain of its stockholders.

5.1

 

Opinion of Cooley Godward LLP.

10.1

+

Form of Indemnity Agreement.

10.2

+

Amended and Restated 2004 Equity Incentive Plan.

10.3

+

Forms of Stock Option Agreements under the Amended and Restated 2004 Equity Incentive Plan.

10.4

+

2004 Employee Stock Purchase Plan and Form of Offering Document thereunder.

10.5

(1)+

Employment letter agreement dated February 21, 2000 between the Registrant and Mark Zoller, Ph.D.

10.6

(1)+

Employment letter agreement dated June 7, 2000 between the Registrant and Klaus Gubernator, Ph.D.

10.7

(1)+

Employment letter agreement dated June 2, 2003 between the Registrant and Kent Snyder.

10.8

(1)+

Employment letter agreement dated August 25, 2003 between the Registrant and Harry Leonhardt, Esq.

10.9

(1)+

Employment letter agreement dated September 8, 2003 between the Registrant and John Poyhonen.

10.10

(1)

Expansion Lease dated November 20, 1995 between Health Science Properties, Inc. and Sequana Therapeutics, Inc., as amended, and Assignment and Assumption of Lease, dated July 12, 2000, as amended, between the Registrant and Axys Pharmaceuticals, Inc.

10.11*

 

Exclusive License and Bailment Agreement dated March 10, 2000 between the Registrant and the Regents of the University of California.

10.12*

 

Collaborative Research and License Agreement dated November 1, 2000, as amended April 16, 2002, between the Registrant and Aurora Biosciences Corporation.

10.13*

 

Collaborative Research and License Agreement dated December 6, 2000, as amended May 2, 2002, between the Registrant and Kraft Foods, Inc.

10.14*

 

Collaborative Research and License Agreement dated March 28, 2001, as amended July 26, 2002, November 5, 2002 and February 19, 2004 between the Registrant and Campbell Soup Company.

10.15*

 

Collaborative Research and License Agreement dated April 18, 2002, as amended October 23, 2003, between the Registrant and Nestec, Ltd.
     


10.16*

 

Collaborative Research, Development, Commercialization and License Agreement dated April 22, 2002, as amended April 7, 2004, between the Registrant and the Coca-Cola Company.

23.1

 

Consent of Ernst & Young LLP, independent registered public accounting firm.

23.2

 

Consent of Cooley Godward LLP. Reference is made to Exhibit 5.1.

24.1

(1)

Power of Attorney. Reference is made to the signature page hereto.

+
Indicates management contract or compensatory plan.

*
Confidential treatment has been requested with respect to certain portions of this exhibit. Omitted portions have been filed separately with the Securities and Exchange Commission.

(1)
Previously filed.



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TABLE OF CONTENTS
SUMMARY
Our Company
Our Product Candidates
Our Discovery and Development Approach
Our Strategy
Risks Affecting Us
Corporate Information
The Offering
Summary Financial Data
RISK FACTORS
FORWARD-LOOKING STATEMENTS
NOTICE TO INVESTORS
USE OF PROCEEDS
DIVIDEND POLICY
CAPITALIZATION
DILUTION
SELECTED FINANCIAL DATA
MANAGEMENT'S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS
BUSINESS
MANAGEMENT
Summary Compensation Table (1)
CERTAIN TRANSACTIONS
PRINCIPAL STOCKHOLDERS
DESCRIPTION OF CAPITAL STOCK
MATERIAL UNITED STATES FEDERAL INCOME TAX CONSEQUENCES TO NON-UNITED STATES HOLDERS
SHARES ELIGIBLE FOR FUTURE SALE
UNDERWRITING
LEGAL MATTERS
EXPERTS
WHERE YOU CAN FIND ADDITIONAL INFORMATION
Senomyx, Inc. Index to Financial Statements
Report of Independent Registered Public Accounting Firm
Senomyx, Inc. Balance Sheets (In thousands, except share and per share data)
Senomyx, Inc. Statements of Operations (In thousands, except share and per share data)
Senomyx, Inc. Statements of Cash Flows (In thousands)
Senomyx, Inc. Notes to Financial Statements (Information as of March 31, 2004 and for the three months ended March 31, 2003 and 2004 is unaudited)
PART II INFORMATION NOT REQUIRED IN PROSPECTUS
SIGNATURES
EXHIBIT INDEX

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Exhibit 1.1


Senomyx, Inc.

6,000,000 Shares(1)
Common Stock
($0.001 par value)


(1)
Plus an option to purchase from the Company, up to 900,000 additional Securities to cover over-allotments.

Underwriting Agreement

New York, New York
June    , 2004

Citigroup Global Markets Inc.
Deutsche Bank Securities Inc.
Needham & Company, Inc.
First Albany Capital Inc.
As Representatives of the several Underwriters,
c/o Citigroup Global Markets Inc.
388 Greenwich Street
New York, New York 10013

Ladies and Gentlemen:

        Senomyx, Inc., a corporation organized under the laws of the state of Delaware (the "Company"), proposes to sell to the several underwriters named in Schedule I hereto (the "Underwriters"), for whom you (the "Representatives") are acting as representatives, 6,000,000 shares of Common Stock, $0.001 par value ("Common Stock") of the Company (said shares to be issued and sold by the Company being hereinafter called the "Underwritten Securities"). The Company also proposes to grant to the Underwriters an option to purchase up to 900,000 additional shares of Common Stock to cover over-allotments (the "Option Securities"; the Option Securities, together with the Underwritten Securities, being hereinafter called the "Securities"). To the extent there are no additional Underwriters listed on Schedule I other than you, the term Representatives as used herein shall mean you, as Underwriters, and the terms Representatives and Underwriters shall mean either the singular or plural as the context requires. Certain terms used herein are defined in Section 17 hereof. As part of the offering contemplated by this Agreement, Citigroup Global Markets Inc. has agreed to reserve out of the Securities set forth opposite its name on Schedule I to this Agreement, up to 300,000 shares, for sale to the Company's employees, officers, and directors and other parties associated with the Company (collectively, "Participants"), as set forth in the Prospectus under the heading "Underwriting" (the "Directed Share Program"). The Securities to be sold by Citigroup Global Markets Inc. pursuant to the Directed Share Program (the "Directed Shares") will be sold by Citigroup Global Markets Inc. pursuant to this Agreement at the public offering price. Any Directed Shares not orally confirmed for purchase by any Participants by 7:30 A.M. New York City time on the business day following the date on which this Agreement is executed will be offered to the public by Citigroup Global Markets Inc. as set forth in the Prospectus.

        1.     Representations and Warranties.     The Company represents and warrants to, and agrees with, each Underwriter as set forth below in this Section 1.


2


3


4


5


6


7


        Any certificate signed by any officer of the Company and delivered to the Representatives or counsel for the Underwriters in connection with the offering of the Securities shall be deemed a representation and warranty by the Company, as to matters covered thereby, to each Underwriter.

        Furthermore, the Company represents and warrants to Citigroup Global Markets Inc. that none of the Participants in the Directed Share Program are persons whose citizenship, domicile or residence are such that any Directed Shares would be required to be offered outside the United States. The Company has not offered, or caused the Underwriters to offer, Securities to any person pursuant to the Directed Share Program with the specific intent to unlawfully influence (i) a customer or supplier of the Company to alter the customer's or supplier's level or type of business with the Company, or (ii) a trade journalist or publication to write or publish favorable information about the Company or its products.

        2.     Purchase and Sale.     (a) Subject to the terms and conditions and in reliance upon the representations and warranties herein set forth, the Company agrees to sell to each Underwriter, and each Underwriter agrees, severally and not jointly, to purchase from the Company, at a purchase price of $            per share, the amount of the Underwritten Securities set forth opposite such Underwriter's name in Schedule I hereto.

        3.     Delivery and Payment.     Delivery of and payment for the Underwritten Securities and the Option Securities (if the option provided for in Section 2(b) hereof shall have been exercised on or before the third Business Day prior to the Closing Date) shall be made at 10:00 AM, New York City time, on June     , 2004, or at such time on such later date not more than three Business Days after the foregoing date as the Representatives shall designate, which date and time may be postponed by agreement between the Representatives and the Company or as provided in Section 9 hereof (such date and time of delivery and payment for the Securities being herein called the "Closing Date"). Delivery of the Securities shall be made to the Representatives for the respective accounts of the several Underwriters against payment by the several Underwriters through the Representatives of the purchase price thereof to or upon the order of the Company by wire transfer payable in same-day funds to an account specified by the Company. Delivery of the Underwritten Securities and the Option Securities shall be made through the facilities of The Depository Trust Company unless the Representatives shall otherwise instruct.

8


        If the option provided for in Section 2(b) hereof is exercised after the third Business Day prior to the Closing Date, the Company will deliver the Option Securities (at the expense of the Company) to the Representatives, at 388 Greenwich Street, New York, New York, on the date specified by the Representatives (which shall be within three Business Days after exercise of said option) for the respective accounts of the several Underwriters, against payment by the several Underwriters through the Representatives of the purchase price thereof to or upon the order of the Company by wire transfer payable in same-day funds to an account specified by the Company. If settlement for the Option Securities occurs after the Closing Date, the Company will deliver to the Representatives on the settlement date for the Option Securities, and the obligation of the Underwriters to purchase the Option Securities shall be conditioned upon receipt of, supplemental opinions, certificates and letters confirming as of such date the opinions, certificates and letters delivered on the Closing Date pursuant to Section 6 hereof.

        4.     Offering by Underwriters.     It is understood that the several Underwriters propose to offer the Securities for sale to the public as set forth in the Prospectus.

        5.     Agreements.     The Company agrees with the several Underwriters that:

9


10


11


        6.     Conditions to the Obligations of the Underwriters.     The obligations of the Underwriters to purchase the Underwritten Securities and the Option Securities, as the case may be, shall be subject to the accuracy of the representations and warranties on the part of the Company contained herein as of the Execution Time, the Closing Date and any settlement date pursuant to Section 3 hereof, to the accuracy of the statements of the Company made in any certificates pursuant to the provisions hereof, to the performance by the Company of its obligations hereunder and to the following additional conditions:

12


13


        If any of the conditions specified in this Section 6 shall not have been fulfilled when and as provided in this Agreement, or if any of the opinions and certificates mentioned above or elsewhere in this Agreement shall not be reasonably satisfactory in form and substance to the Representatives and counsel for the Underwriters, this Agreement and all obligations of the Underwriters hereunder may be canceled at, or at any time prior to, the Closing Date by the Representatives. Notice of such cancellation shall be given to the Company in writing or by telephone or facsimile confirmed in writing.

        The documents required to be delivered by this Section 6 shall be delivered at the office of Cleary, Gottlieb, Steen & Hamilton, counsel for the Underwriters, at 1 Liberty Plaza, New York, New York 10006, Attention David Lopez, Esq., on the Closing Date.

        7.     Reimbursement of Underwriters' Expenses.     If the sale of the Securities provided for herein is not consummated because any condition to the obligations of the Underwriters set forth in Section 6 hereof is not satisfied or because of any refusal, inability or failure on the part of the Company to perform any agreement herein or comply with any provision hereof other than by reason of a default by any of the Underwriters, the Company will reimburse the Underwriters severally through Citigroup Global Markets Inc. on demand for all reasonable out-of-pocket expenses (including reasonable fees and disbursements of counsel) that shall have been incurred by them in connection with the proposed purchase and sale of the Securities. If the sale of the Securities provided for herein is not consummated because of any termination pursuant to Section 10 hereof, the Company will reimburse the Underwriters severally through Citigroup Global Markets Inc. on demand for all reasonable out-of-pocket expenses that shall have been incurred by them in connection with the proposed purchase and sale of the Securities, except (i) any travel expenses incurred by the Underwriters and (ii) fees and disbursements of counsel to the Underwriters.

        8.     Indemnification and Contribution.     (a) The Company agrees to indemnify and hold harmless each Underwriter, the directors, officers, employees and agents of each Underwriter and each person who controls any Underwriter within the meaning of either the Act or the Exchange Act against any and all losses, claims, damages or liabilities, joint or several, to which they or any of them may become subject under the Act, the Exchange Act or other federal or state statutory law or regulation, at common law or otherwise, insofar as such losses, claims, damages or liabilities (or actions in respect thereof) arise out of or are based upon any untrue statement or alleged untrue statement of a material fact contained in the registration statement for the registration of the Securities as originally filed or in any amendment thereof, or in any Preliminary Prospectus or the Prospectus, or in any amendment thereof or supplement thereto, or arise out of or are based upon the omission or alleged omission to state therein a material fact required to be stated therein or necessary to make the statements therein not misleading, and agrees to reimburse each such indemnified party, as incurred, for any legal or other expenses reasonably incurred by them in connection with investigating or defending any such loss, claim, damage, liability or action; provided, however , that the Company will not be liable in any such case to the extent that any such loss, claim, damage or liability arises out of or is based upon any such untrue statement or alleged untrue statement or omission or alleged omission made therein in reliance upon and in conformity with written information furnished to the Company by or on behalf of any Underwriter through the Representatives specifically for inclusion therein. This indemnity agreement will be in addition to any liability which the Company may otherwise have.

14


15


        Notwithstanding anything contained herein to the contrary, if indemnity may be sought pursuant to Section 8(d) hereof in respect of such action or proceeding, then in addition to such separate firm for the indemnified parties, the indemnifying party shall be liable for the reasonable fees and expenses of not more than one separate firm (in addition to any local counsel) for the Citigroup Entities for the defense of any losses, claims, damages and liabilities arising out of the Directed Share Program.

16


        9.     Default by an Underwriter.     If any one or more Underwriters shall fail to purchase and pay for any of the Securities agreed to be purchased by such Underwriter or Underwriters hereunder and such failure to purchase shall constitute a default in the performance of its or their obligations under this Agreement, the remaining Underwriters shall be obligated severally to take up and pay for (in the respective proportions which the amount of Securities set forth opposite their names in Schedule I hereto bears to the aggregate amount of Securities set forth opposite the names of all the remaining Underwriters) the Securities which the defaulting Underwriter or Underwriters agreed but failed to purchase; provided, however , that in the event that the aggregate amount of Securities which the defaulting Underwriter or Underwriters agreed but failed to purchase shall exceed 10% of the aggregate amount of Securities set forth in Schedule I hereto, the remaining Underwriters shall have the right to purchase all, but shall not be under any obligation to purchase any, of the Securities, and if such nondefaulting Underwriters do not purchase all the Securities, this Agreement will terminate without liability to any nondefaulting Underwriter or the Company. In the event of a default by any Underwriter as set forth in this Section 9, the Closing Date shall be postponed for such period, not exceeding five Business Days, as the Representatives shall determine in order that the required changes in the Registration Statement and the Prospectus or in any other documents or arrangements may be effected. Nothing contained in this Agreement shall relieve any defaulting Underwriter of its liability, if any, to the Company and any nondefaulting Underwriter for damages occasioned by its default hereunder.

        10.     Termination.     This Agreement shall be subject to termination in the absolute discretion of the Representatives, by notice given to the Company prior to delivery of and payment for the Securities, if at any time prior to such time (i) trading in the Company's Common Stock shall have been suspended by the Commission or the Nasdaq National Market or trading in securities generally on the New York Stock Exchange or the Nasdaq National Market shall have been suspended or limited or minimum prices shall have been established on either of such Exchange or the Nasdaq National Market, (ii) a banking moratorium shall have been declared either by federal or New York State authorities or (iii) there shall have occurred any outbreak or escalation of hostilities, declaration by the United States of a national emergency or war, or other calamity or crisis the effect of which on financial markets is such as to make it, in the sole judgment of the Representatives, impractical or inadvisable to proceed with the offering or delivery of the Securities as contemplated by the Prospectus (exclusive of any supplement thereto).

        11.     Representations and Indemnities to Survive.     The respective agreements, representations, warranties, indemnities and other statements of the Company or its officers and of the Underwriters set forth in or made pursuant to this Agreement will remain in full force and effect, regardless of any investigation made by or on behalf of any Underwriter or the Company or any of the officers, directors,

17



employees, agents or controlling persons referred to in Section 8 hereof, and will survive delivery of and payment for the Securities. The provisions of Sections 7 and 8 hereof shall survive the termination or cancellation of this Agreement.

        12.     Notices.     All communications hereunder will be in writing and effective only on receipt, and, if sent to the Representatives, will be mailed, delivered or telefaxed to the Citigroup Global Markets Inc. General Counsel (fax no.: (212) 816-7912) and confirmed to the General Counsel, Citigroup Global Markets Inc., at 388 Greenwich Street, New York, New York, 10013, Attention: General Counsel; or, if sent to the Company, will be mailed, delivered or telefaxed to (fax no.: (858) 404-0750) and confirmed to it at 11099 North Torrey Pines Road, La Jolla, California 92037, attention of the Legal Department.

        13.     Successors.     This Agreement will inure to the benefit of and be binding upon the parties hereto and their respective successors and the officers, directors, employees, agents and controlling persons referred to in Section 8 hereof, and no other person will have any right or obligation hereunder.

        14.     Applicable Law.     This Agreement will be governed by and construed in accordance with the laws of the State of New York applicable to contracts made and to be performed within the State of New York.

        15.     Counterparts.     This Agreement may be signed in one or more counterparts, each of which shall constitute an original and all of which together shall constitute one and the same agreement.

        16.     Headings.     The section headings used herein are for convenience only and shall not affect the construction hereof.

        17.     Definitions.     The terms which follow, when used in this Agreement, shall have the meanings indicated.

        "Act" shall mean the Securities Act of 1933, as amended, and the rules and regulations of the Commission promulgated thereunder.

        "Business Day" shall mean any day other than a Saturday, a Sunday or a legal holiday or a day on which banking institutions or trust companies are authorized or obligated by law to close in New York City or the state of Delaware.

        "Canadian Person" shall mean any person who is a national or resident of Canada, any corporation, partnership, or other entity created or organized in or under the laws of the Canada or of any political subdivision thereof, or any estate or trust the income of which is subject to Canadian Federal income taxation, regardless of its source (other than any non-Canadian branch of any Canadian Person), and shall include any Canadian branch of a person other than a Canadian Person.

        "Commission" shall mean the Securities and Exchange Commission.

        "Effective Date" shall mean each date and time that the Registration Statement, any post-effective amendment or amendments thereto and any Rule 462(b) Registration Statement became or become effective.

        "Exchange Act" shall mean the Securities Exchange Act of 1934, as amended, and the rules and regulations of the Commission promulgated thereunder.

        "Execution Time" shall mean the date and time that this Agreement is executed and delivered by the parties hereto.

        "Lock Up Period" means the period beginning with and including the date of this Agreement and ending on and including the 180 th day after the date of this Agreement.

18



        "Material Adverse Effect" shall mean a material adverse effect on the condition (financial or otherwise), prospects, earnings, business or properties of the Company, taken as a whole, whether or not arising from transactions in the ordinary course of business.

        "Preliminary Prospectus" shall mean any preliminary prospectus referred to in paragraph 1(a) above and any preliminary prospectus included in the Registration Statement at the Effective Date that omits Rule 430A Information.

        "Prospectus" shall mean the prospectus relating to the Securities that is first filed pursuant to Rule 424(b) after the Execution Time or, if no filing pursuant to Rule 424(b) is required, shall mean the form of final prospectus relating to the Securities included in the Registration Statement at the Effective Date.

        "Registration Statement" shall mean the registration statement referred to in paragraph 1(a) above, including exhibits and financial statements, as amended at the Execution Time (or, if not effective at the Execution Time, in the form in which it shall become effective) and, in the event any post-effective amendment thereto or any Rule 462(b) Registration Statement becomes effective prior to the Closing Date, shall also mean such registration statement as so amended or such Rule 462(b) Registration Statement, as the case may be. Such term shall include any Rule 430A Information deemed to be included therein at the Effective Date as provided by Rule 430A.

        "Rule 424", "Rule 430A" and "Rule 462" refer to such rules under the Act.

        "Rule 430A Information" shall mean information with respect to the Securities and the offering thereof permitted to be omitted from the Registration Statement when it becomes effective pursuant to Rule 430A.

        "Rule 462(b) Registration Statement" shall mean a registration statement and any amendments thereto filed pursuant to Rule 462(b) relating to the offering covered by the registration statement referred to in Section 1(a) hereof.

        18.     Canada.     Each of the Underwriters hereby covenants and agrees that it will not distribute the Securities in such a manner as to require the filing of a prospectus or similar document (excluding a private placement offering memorandum) with respect to the Securities under the laws of any Province or Territory in Canada.

19



        If the foregoing is in accordance with your understanding of our agreement, please sign and return to us the enclosed duplicate hereof, whereupon this letter and your acceptance shall represent a binding agreement among the Company and the several Underwriters.

    Very truly yours,
         
    SENOMYX, INC.
         
         
    By:    
       
    Name:
Title:
   
The foregoing Agreement is hereby
confirmed and accepted as of the
date first above written.
   
         
         
Citigroup Global Markets Inc.
Deutsche Bank Securities Inc.
Needham & Company, Inc.
First Albany Capital Inc.
   
         
         
By:   Citigroup Global Markets Inc.    
         
         
By:        
   
Name:
Title:
   
         
         
For themselves and the other
several Underwriters named in
Schedule I to the foregoing
Agreement.
   

20


SCHEDULE I

Underwriters

  Number of Underwritten Securities
to be Purchased

Citigroup Global Markets Inc.    
Deutsche Bank Securities Inc.    
Needham & Company, Inc.    
First Albany Capital Inc.    
     
     
     
     
   
  Total    
   

SCHEDULE II

Michael J. Stryer, Custodian for Adam F. Stryer under the UGMA
Daniel B. Stryer, Custodian for Rebecca C. Stryer under the UGMA
Michael and Daniel Stryer as Trustees of the Stryer Grandchildren's Trust
Lubert Stryer or Andrea S. Stryer, as Trustee of The Stryer Revocable Trust
Lubert Stryer
Andrea Stryer
Oscar Tang
Grantor Trust for Tracey L. Tang
Grantor Trust for Dana E. Tang
Grantor Trust for Kristin A. Tang
Paul A. Grayson, Custodian for Natalie Grayson under the UGMA
Paul A. Grayson, Custodian for Nicholas Grayson under the UGMA
Lara Sachs
Joyce Sachs
Ann Grayson
Thomas A. Coll, as Trustee of the Paula S. Grayson and Paul A. Grayson's Children's Trust
Paul A. Grayson
Charles S. Zuker and Patricia R. Zuker, Trustees of the Murielle Zuker Irrevocable Trust dated 11/29/1999
Charles S. Zuker and Patricia R. Zuker, Trustees of the Felipe Sam Zuker Irrevocable Trust dated 11/29/1999
Rafael Ramolfo
Saul Zuker
Estrella Zuker
Dora Zuker
Pamela Ramolfo
Arturo Arriagada
Roberto Gonzalez de la Torre
Charles Zuker, Ph.D.
Celia Silberberg Zuker
Charles S. Zuker
Charles Zuker
Max Peter Rink
Wendy Globe Tsien
Roger Y. Tsien
Mark Leschly
Lori Robson
David Schnell
Jay Short
Kent Snyder
Timothy Wollaeger
Klaus Gubernator
Harry Leonhardt
John Poyhonen
Mark Zoller
The North American Nutrition and Agribusiness Fund, L.P.
Domain Partners IV, L.P.
DP IV Associates, L.P.
H&Q Healthcare Investors
H&Q Life Sciences Investors
Kingsbury Capital Partners LP III
Kingsbury Capital Partners LP IV
 

Kevin J. Kinsella, as Trustee of The Kevin J. Kinsella Declaration of Trust of November 2, 1994
Merrill Lynch Ventures L.P. 2001
Caduceus Private Investments, LP
PW Juniper Crossover Fund, L.L.C.
Prospect Venture Partners, LP
Rho Management Trust I
Excelsior Venture Partners III, LLC
Zaffaroni Revocable Trust 1/24/86
Invitrogen Corporation
Incyte Genomics

[Form of Lock-Up Agreement]   EXHIBIT A

[Letterhead of officer, director or major shareholder of
Senomyx, Inc.]


Senomyx, Inc.
Public Offering of Common Stock

March 17, 2004

Citigroup Global Markets Inc.
Deutsche Bank Securities Inc.
As Representatives of the several Underwriters,
c/o Citigroup Global Markets Inc.
388 Greenwich Street
New York, New York 10013

Ladies and Gentlemen:

        This letter is being delivered to you in connection with the proposed Underwriting Agreement (the "Underwriting Agreement"), between Senomyx, Inc., a Delaware corporation (the "Company"), and each of you as representatives of a group of Underwriters named therein, relating to an underwritten public offering of Common Stock, $0.001 par value (the "Common Stock"), of the Company.

        In order to induce you and the other Underwriters to enter into the Underwriting Agreement, the undersigned will not, without the prior written consent of Citigroup Global Markets Inc., offer, sell, contract to sell, pledge or otherwise dispose of, (or enter into any transaction which is designed to, or might reasonably be expected to, result in the disposition (whether by actual disposition or effective economic disposition due to cash settlement or otherwise) by the undersigned or any affiliate of the undersigned or any person in privity with the undersigned or any affiliate of the undersigned), directly or indirectly, including the filing (or participation in the filing) of a registration statement with the Securities and Exchange Commission in respect of, or establish or increase a put equivalent position or liquidate or decrease a call equivalent position within the meaning of Section 16 of the Securities Exchange Act of 1934, as amended, and the rules and regulations of the Securities and Exchange Commission promulgated thereunder with respect to, any shares of capital stock of the Company or any securities convertible into, or exercisable or exchangeable for such capital stock, or publicly announce an intention to effect any such transaction, during the Lock Up Period, other than (a) bona fide gifts to the immediate family of, or transfers to a trust for the direct or indirect benefit of the undersigned or the immediate family of, the undersigned or (b) distributions to partners, members, or stockholders, as applicable, of the undersigned (each such gift, transfer or distribution, a "transfer"); provided that, in each of the transfers described in clauses (a) and (b) of this sentence, prior to such transfer the transferee shall enter into an agreement with Citigroup Global Markets Inc. on terms substantially identical to this letter.

        The term "Lock Up Period" means the period beginning with and including the date of the Underwriting Agreement and ending on and including the 180 th day after the date of the Underwriting Agreement.



        If for any reason the Underwriting Agreement shall be terminated prior to the Closing Date (as defined in the Underwriting Agreement), the agreement set forth above shall likewise be terminated.

    Yours very truly,
     
     
    [Signature of officer, director or major stockholder]
     
     
    [Name and address of officer, director or major stockholder]

EXHIBIT B

Ladies and Gentlemen:

        We have acted as counsel for Senomyx, Inc., a Delaware corporation, (the "Company") in connection with the sale by the Company of up to                        shares of common stock of the Company (the "Securities"), all pursuant to that certain Underwriting Agreement dated                        , by and among the underwriters listed on Schedule I thereto (the "Underwriters") and the Company (the "Agreement"). We are rendering this opinion pursuant to Section 6(b) of the Agreement. Except as otherwise defined herein, capitalized terms used have the respective meanings given to them in the Agreement.

        In connection with this opinion, we have examined and relied upon the representations and warranties as to factual matters contained in and made pursuant to the Agreement by the various parties and originals, or copies certified to our satisfaction, of such records, documents, certificates, opinions, memoranda and other instruments as in our judgment are necessary or appropriate to enable us to render the opinion expressed below.

        As to certain factual matters, we have relied upon certificates of officers of the Company and have not sought to independently verify such matters. Where we render an opinion "to our knowledge" or concerning an item "known to us" or our opinion otherwise refers to our knowledge, our investigation of the factual basis for such opinion consists solely of (i) an inquiry of attorneys within this firm who perform legal services for the Company, (ii) receipt of a certificate executed by an officer of the Company covering such matters and (iii) such other investigation, if any, that we specifically set forth herein. We have conducted no further factual investigation.

        In rendering this opinion, we have assumed: the genuineness and authenticity of all signatures on original documents; the authenticity of all documents submitted to us as originals; the conformity to originals of all documents submitted to us as copies; the accuracy, completeness and authenticity of certificates of public officials; and the due authorization, execution and delivery of all documents (except the due authorization, execution and delivery by the Company of the Agreement), where authorization, execution and delivery are prerequisites to the effectiveness of such documents. We have also assumed: that all individuals executing and delivering documents in their individual capacities had the legal capacity to so execute and deliver; that you have received all documents you were to receive under the Agreement; that the Agreement is an obligation binding upon you and the several Underwriters; and that there are no extrinsic agreements or understandings among the parties to the Agreement that would modify or interpret the terms thereof or the respective rights or obligations of the parties thereunder.

        Our opinion is expressed only with respect to the federal laws of the United States of America, the laws of the State of California and the General Corporation Law of the State of Delaware. We express no opinion as to whether the laws of any particular jurisdiction apply and no opinion to the extent that the laws of any jurisdiction other than those identified above are applicable to the subject matter hereof.

        With regard to our opinion in paragraphs 1 and 2 below with respect to the good standing of the Company, we have relied solely upon certificates of the Secretaries of State of the indicated jurisdictions as of a recent date.

        With regard to our opinion in paragraph 2 below with respect to the Company's qualifications to do business as a foreign corporation, we have based our opinion solely upon a certificate of an officer of the Company as to the states in which the Company maintains an office, has employees or owns or leases property.

        With regard to our opinion in paragraph 3 below with respect to full payment of the outstanding capital stock of the Company, we have examined and relied upon a certificate of an officer of the Company to the effect that the consideration for all outstanding shares of capital stock of the Company was received by the Company in accordance with the provisions of the applicable resolutions of the



Board of Directors and any plan or agreement relating to the issuance of such shares. We have not undertaken any independent verification.

        With regard to our opinions in paragraph 7 below with respect to the existence of rights of first refusal or other similar rights to subscribe for the Securities, and with respect to the existence of options, warrants or other rights to purchase or acquire any shares of capital stock of the Company, our investigation of the factual basis for such opinion includes an enquiry of the General Counsel of the Company.

        With regard to our opinion in paragraph 8 below with respect to indentures, contracts and other documents required to be filed as an exhibit to the Registration Statement, our investigation of the factual basis for such opinion consists solely of (i) a certificate of an officer of the Company, (ii) copies of indentures, contracts, leases, mortgages, deeds of trust, note agreements, loans or other agreements or instruments furnished to us by the Company, and identified as material ("Material Contracts") and attached hereto as Exhibit A . We have not undertaken any independent verification and we have assumed there are no extrinsic agreements or understandings among the parties to the Material Contracts that would modify or interpret the terms thereof or the respective rights or obligations of the parties thereunder.

        With regard to our opinion in paragraph 8 below with respect to legal or governmental proceedings required to be disclosed in the Prospectus, our investigation of the factual basis for such opinion consists solely of (i) a certificate of an officer of the Company and (ii) an inquiry of attorneys within this firm who perform legal services for the Company. We have not undertaken any independent verification.

        With regard to our opinion in paragraph 10 below, our opinion that the Registration Statement has become effective under the Act and that no stop order suspending the effectiveness of the Registration Statement has been issued and that no proceedings for that purpose have been initiated or overtly threatened is based solely upon oral advice from the staff of the Commission to that effect. We have made no other investigation.

        With regard to our opinion in paragraph 13 below, we have based our opinion, to the extent we consider appropriate, on Rule 3a-8 under the Investment Company Act of 1940, as amended, and our investigation of the factual basis for such opinion consists solely of our review of a certificate of an officer of the Company as to compliance with each of the requirements necessary to comply with Rule 3a-8. We have not undertaken any independent verification.

        We are not rendering any opinion as to compliance with any tax, insolvency or antitrust law, rule or regulation or any antifraud law, rule or regulation relating to securities or to the sale or issuance thereof, or any local law. Furthermore, we express no opinion with respect to compliance with state securities or blue sky laws in connection with the purchase and distribution of the Securities by the Underwriters or clearance with the NASD.

        On the basis of the foregoing, in reliance thereon and with the foregoing qualifications, we are of the opinion that:

        1.     The Company has been duly incorporated and is validly existing as a corporation in good standing under the laws of the State of Delaware, with full corporate power and authority to own or lease, as the case may be, and to operate its properties and conduct its business as described in the Prospectus.

        2.     The Company is duly qualified to do business as a foreign corporation and is in good standing under the laws of each state of the United States in which the Company maintains an office, has employees or owns or leases property.

        3.     The authorized, issued and outstanding capital stock of the Company was as set forth in the Prospectus under the caption "Capitalization" as of the date stated therein. As of the date hereof and after giving effect to the sale of the Securities, the Company's authorized capital stock consists of



(a)                         shares of Common Stock, par value $0.01 per share, of which                        shares are issued and outstanding, and (b)                          shares of Preferred Stock, par value $0.01 per share, none of which are issued and outstanding. The issued and outstanding shares of capital stock of the Company have been duly and validly authorized and issued and are fully paid and nonassessable.

        4.     The Securities have been duly authorized and, when issued and paid for by the Underwriters pursuant to the Agreement, will be validly issued, fully paid and nonassessable.

        5.     The Securities are duly listed, and admitted and authorized for quotation on the Nasdaq National Market.

        6.     The specimen certificate for the Securities filed as an exhibit to the Registration Statement is in due and proper form under Delaware law.

        7.     The holders of outstanding shares of capital stock of the Company are not entitled to preemptive or, to our knowledge, rights of first refusal or other similar rights to subscribe for the Securities. Except as set forth in the section captioned "Capitalization" in the Prospectus as of the date stated therein, to our knowledge there were no options, warrants or other rights to purchase or acquire any shares of capital stock of the Company.

        8.     To our knowledge, there is (i) no action, suit or proceeding by or before any court or other governmental agency, authority or body or any arbitrator pending or overtly threatened against the Company or its properties of a character required to be disclosed in the Prospectus that is not disclosed in the Prospectus as required by the Act and the rules thereunder, and (ii) no indenture, contract, lease, mortgage, deed of trust, note agreement, loan or other agreement or instrument of a character required to be filed as an exhibit to the Registration Statement, which is not filed as required by the Act and the rules thereunder.

        9.     The statements in the Prospectus under the headings "Description of Capital Stock," "Material United States Tax Consequences to Non-United States Holders" and "Shares Eligible for Future Sale," insofar as such statements purport to summarize legal matters, agreements or documents discussed therein, fairly present, to the extent required by the Act and the rules thereunder, in all material respects, such legal matters, agreements or documents.

        10.     The Registration Statement has become effective under the Act, no stop order suspending the effectiveness of the Registration Statement has been issued and no proceedings for that purpose have been instituted or overtly threatened. Any required filing of the Prospectus, and any supplement thereto, pursuant to Rule 424(b) under the Act, has been made in the manner and within the time period required by Rule 424(b).

        11.     The Registration Statement and the Prospectus (other than the financial statements and notes thereto or other financial or statistical data derived therefrom, as to which we express no opinion) comply as to form in all material respects with the applicable requirements of the Act and the rules thereunder.

        12.     The Agreement has been duly authorized by all necessary corporate action on the part of the Company and has been duly executed and delivered by the Company.

        13.     The Company is not, and, after giving effect to the offering and sale of the Securities and the application of the proceeds thereof as described in the Prospectus, will not be, an "investment company" as defined in the Investment Company Act of 1940, as amended.

        14.     No consent, approval, authorization or filing with or order of any court or governmental agency or body in the United States having jurisdiction over the Company is required for the consummation by the Company of the transactions contemplated by the Agreement, except such as have been obtained under the Act and except such as may be required under the blue sky laws of any jurisdiction in connection with the purchase and distribution of the Securities by the Underwriters in



the manner contemplated in the Agreement and in the Prospectus, or under the bylaws, rules and regulations of the NASD.

        15.     The issue and sale of the Securities pursuant to the Agreement will not result in a breach or violation of, or imposition of any lien, charge or encumbrance upon any property or assets of the Company, pursuant to (i) the charter or bylaws of the Company, (ii) the terms of any Material Contract; or (iii) to our knowledge, any statute, law, rule, or regulation applicable to the Company or any judgment, order or decree applicable to the Company of any court, regulatory body, administrative agency, governmental body, arbitrator or other authority having jurisdiction over the Company or any of its properties, except for the bylaws, rules and regulations of the NASD and state securities or blue sky laws.

        16.     To our knowledge, except as set forth in the Prospectus, no holders of securities of the Company have rights to require the registration under the Act of resales of such securities and, except as set forth in the Prospectus, all rights known to us to register the resales of shares of common stock or other securities of the Company, because of the filing of the Registration Statement by the Company, have, with respect to the offering contemplated thereby, been waived or such rights have expired by reason of lapse of time following notification of the Company's intent to file the Registration Statement.

***********************

        In connection with the preparation of the Registration Statement and the Prospectus, we have participated in conferences with officers and other representatives of the Company and with its certified public accountants, as well as with representatives of the Underwriters and their counsel. At such conferences, the contents of the Registration Statement and the Prospectus and related matters were discussed. We have not independently verified, and accordingly are not confirming and assume no responsibility for the accuracy, completeness or fairness of the statements contained in the Registration Statement or the Prospectus (except to the extent expressly set forth in paragraph 9 above). On the basis of the foregoing, no facts have come to our attention that have caused us to believe (i) that the Registration Statement (except as to the financial statements and schedules, related notes and other financial data and statistical data derived therefrom, as to which we express no belief), at the date and time that the Registration Statement became effective, contained any untrue statement of a material fact or omitted to state a material fact required to be stated therein or necessary to make the statements therein, or (ii) that the Prospectus (except as to the financial statements and schedules, related notes and other financial and statistical data derived therefrom, as to which we express no comment) as of its date or the date hereof contained or contains any untrue statement of a material fact or omitted or omits to state a material fact necessary, in order to make the statements therein, in light of the circumstances under which they were made, not misleading.

        This opinion is intended for the sole benefit of the several Underwriters and may not be made available to or relied upon by any other person, firm or entity without our prior written consent. This opinion is limited to the matters expressly set forth in this letter, and no opinion has been implied, or may be inferred, beyond the matters expressly stated. This opinion speaks only as to law and facts in effect or existing as of the date hereof and we undertake no obligation or responsibility to update or supplement this opinion to reflect any facts or circumstances that may hereafter come to our attention or any changes in any law that may hereafter occur.

Very truly yours,



EXHIBIT C

[Form of Letter of Ernst and Young LLP]

May    , 2004

Board of Directors
Senomyx, Inc.
11099 North Torrey Pines Road
La Jolla, CA 92037

and

Citigroup Global Markets Inc.
Deutsche Bank Securities Inc.
Needham & Company, Inc.
First Albany Capital, Inc.
As Representatives of the several Underwriters,
c/o Citigroup Global Markets Inc.
388 Greenwich Street
New York, New York 10013

Dear Ladies and Gentlemen:

        We have audited the balance sheets of Senomyx, Inc. (the "Company") as of December 31, 2002 and 2003 and the statements of operations, stockholders' equity, and cash flows for each of the three years in the period ended December 31, 2003, all included in the Registration Statement (No. 333-113998) on Form S-1 as amended, through the date hereof, filed by the Company under the Securities Act of 1933 (the "Act"); our report with respect thereto also is included in such Registration Statement (herein referred to as the "Registration Statement").

        In connection with the Registration Statement:



 
  April 30, 2004
  March 31, 2004
  Increase/
(Decrease)

Net current assets   $     $     $  
Long term debt   $     $     $  
Stockholders' equity   $     $     $  
Common stock (shares)   $     $     $  
 
  One Month ended
April 30, 2004

  One Month ended
April 30, 2003

  Increase
Revenue   $     $     $  
Net loss   $     $     $  
Net loss per share   $     $     $  




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Senomyx, Inc. 6,000,000 Shares(1) Common Stock ($0.001 par value)
Underwriting Agreement
Senomyx, Inc. Public Offering of Common Stock

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Exhibit 3.1


AMENDED AND RESTATED
CERTIFICATE OF INCORPORATION
OF SENOMYX, INC.

        Senomyx, Inc., a corporation organized and existing under the laws of the State of Delaware, hereby certifies as follows:

         FIRST: The name of this corporation is Senomyx, Inc.

         SECOND: The date of filing of its original Certificate of Incorporation with the Secretary of State of Delaware was September 16, 1998.

         THIRD: The Certificate of Incorporation of said corporation shall be amended and restated to read in full as follows:

ARTICLE I.

        The name of this corporation is Senomyx, Inc. (the " Company ").

ARTICLE II.

        The address of the registered office of the Company in the State of Delaware is 9 East Lockerman Street, City of Dover, County of Kent, Delaware 19901, and the name of the registered agent of the Company in the State of Delaware at such address is National Registered Agents, Inc.

ARTICLE III.

        The purpose of the Company is to engage in any lawful act or activity for which a corporation may be organized under the Delaware General Corporation Law (" DGCL ").

ARTICLE IV.

        A.     The Company is authorized to issue two classes of stock to be designated, respectively, "Common Stock" and "Preferred Stock." The total number of shares of all classes of capital stock which the Company shall have authority to issue is 127,500,000 of which 120,000,000 shares of the par value of $.001 each shall be Common Stock (the " Common Stock ") and 7,500,000 shares of the par value of $.001 each shall be Preferred Stock (the " Preferred Stock ").

        B.     The Preferred Stock may be issued from time to time in one or more series. The Board of Directors of the Company (the " Board of Directors ") is hereby expressly authorized to provide for the issue of any or all of the remaining unissued and undesignated shares of the Preferred Stock in one or more series, and to fix the number of shares and to determine or alter for each such series, such voting powers, full or limited, or no voting powers, and such designation, preferences, and relative, participating, optional, or other rights and such qualifications, limitations, or restrictions thereof, as shall be stated and expressed in the resolution or resolutions adopted by the Board of Directors providing for the issuance of such shares and as may be permitted by the DGCL. The Board of Directors is also expressly authorized to increase or decrease the number of shares of any series subsequent to the issuance of shares of that series, but not below the number of shares of such series then outstanding. In case the number of shares of any series shall be decreased in accordance with the foregoing sentence, the shares constituting such decrease shall resume the status that they had prior to the adoption of the resolution originally fixing the number of shares of such series. The number of authorized shares of Preferred Stock may be increased or decreased (but not below the number of shares thereof then outstanding) by the affirmative vote of the holders of a majority of the Common

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Stock, without a vote of the holders of the Preferred Stock, or of any series thereof, unless a vote of any such holders is required pursuant to the terms of any certificate of designation filed with respect to any series of Preferred Stock.

        C.     Each outstanding share of Common Stock shall entitle the holder thereof to one vote on each matter properly submitted to the stockholders of the Company for their vote; provided, however , that, except as otherwise required by law, holders of Common Stock shall not be entitled to vote on any amendment to this Amended and Restated Certificate of Incorporation (including any certificate of designation filed with respect to any series of Preferred Stock) that relates solely to the terms of one or more outstanding series of Preferred Stock if the holders of such affected series are entitled, either separately or together as a class with the holders of one or more other such series, to vote thereon by law or pursuant to this Amended and Restated Certificate of Incorporation (including any certificate of designation filed with respect to any series of Preferred Stock).

ARTICLE V.

        For the management of the business and for the conduct of the affairs of the Company, and in further definition, limitation and regulation of the powers of the Company, of its directors and of its stockholders or any class thereof, as the case may be, it is further provided that:

        A.     The management of the business and the conduct of the affairs of the Company shall be vested in its Board of Directors. The number of directors that shall constitute the Board of Directors shall be fixed exclusively by resolutions adopted by a majority of the authorized number of directors constituting the Board of Directors.

        B.     Subject to the rights of the holders of any series of Preferred Stock to elect additional directors under specified circumstances, directors shall be elected at each annual meeting of stockholders for a term of one year. Each director shall serve until his successor is duly elected and qualified or until his death, resignation or removal. No decrease in the number of directors constituting the Board of Directors shall shorten the term of any incumbent director.

        C.     Subject to any limitation imposed by law, the Board of Directors or any individual director may be removed from office at any time with or without cause by the affirmative vote of the holders of a majority of the voting power of all the then-outstanding shares of capital stock of the corporation, entitled to vote at an election of directors, voting together as a single class.

        D.     Subject to the rights of the holders of any series of Preferred Stock that may come into existence from time to time, any vacancies on the Board of Directors resulting from death, resignation, disqualification, removal or other causes and any newly created directorships resulting from any increase in the number of directors, shall, unless the Board of Directors determines by resolution that any such vacancies or newly created directorships shall be filled by the stockholders, except as otherwise provided by law, be filled only by the affirmative vote of a majority of the directors then in office, even though less than a quorum of the Board of Directors, and not by the stockholders. Any director elected in accordance with the preceding sentence shall hold office for the remainder of the full term of the director for which the vacancy was created or occurred and until such director's successor shall have been elected and qualified.

        E.     Subject to the rights of the holders of any series of Preferred Stock that may come into existence from time to time, the Board of Directors is expressly empowered to adopt, amend or repeal the Bylaws of the Company. Any adoption, amendment or repeal of the Bylaws of the Company by the Board of Directors shall require the approval of a majority of the authorized number of directors. The stockholders shall also have power to adopt, amend or repeal the Bylaws of the Company, subject to any restrictions which may be set forth in this Amended and Restated Certificate of Incorporation

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(including any certificate of designation that may be filed from time to time); provided, however, that, in addition to any vote of the holders of any class or series of stock of the Company required by law or by this Amended and Restated Certificate of Incorporation, the affirmative vote of the holders of at least 66 2 / 3 % of the voting power of all of the then-outstanding shares of the capital stock of the Company entitled to vote generally at an election of directors, voting together as a single class, shall be required for the stockholders to so adopt, amend or repeal any provision of the Bylaws of the Company.

        F.     The directors of the Company need not be elected by written ballot unless the Bylaws of the Company so provide.

        G.     No action shall be taken by the stockholders of the Company except at an annual or special meeting of stockholders called in accordance with the Bylaws of the Company. No action shall be taken by the stockholders of the Company by written consent or electronic transmission.

        H.     Advance notice of stockholder nominations for the election of directors and of business to be brought by stockholders before any meeting of the stockholders of the Company shall be given in the manner provided in the Bylaws of the Company.

ARTICLE VI.

        A.     The liability of a director of the Company for monetary damages shall be eliminated to the fullest extent under applicable law. If the DGCL is amended to authorize corporate action further eliminating or limiting the personal liability of directors, then the liability of a director of the Company shall be eliminated to the fullest extent permitted by the DGCL, as so amended.

        B.     Any repeal or modification of this Article VI shall be prospective and shall not affect the rights under this Article VI in effect at the time of the alleged occurrence of any act or omission to act giving rise to liability or indemnification.

ARTICLE VII.

        A.     The Company reserves the right to amend, alter, change or repeal any provision contained in this Amended and Restated Certificate of Incorporation, in the manner now or hereafter prescribed by statute, except as provided in Section B of this Article VII, and all rights conferred upon the stockholders herein are granted subject to this reservation.

        B.     Notwithstanding any other provisions of this Amended and Restated Certificate of Incorporation or any provision of law which might otherwise permit a lesser vote or no vote, but in addition to any affirmative vote of the holders of any particular class or series of the Company required by law or by this Amended and Restated Certificate of Incorporation or any certificate of designation filed with respect to a series of Preferred Stock that may come into existence from time to time, the affirmative vote of the holders of at least 66 2 / 3 % of the voting power of all of the then-outstanding shares of capital stock of the Company entitled to vote generally at an election of directors, voting together as a single class, shall be required to alter, amend or repeal Articles V, VI or VII of this Amended and Restated Certificate of Incorporation.

* * * *

         FOURTH: This Amended and Restated Certificate of Incorporation has been duly adopted and approved by the Board of Directors.

         FIFTH: This Amended and Restated Certificate of Incorporation has been duly adopted and approved by written consent of the stockholders in accordance with sections 228, 245 and 242 of the DGCL and written notice of such action has been given as provided in section 228.

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         IN WITNESS WHEREOF , said Senomyx, Inc., has caused this Amended and Restated Certificate of Incorporation to be signed by Kent Snyder, its President and Chief Executive Officer, this    day of            , 2004.

    SENOMYX, INC.

 

 

By:

 


        Kent Snyder
        President and Chief Executive Officer

[SIGNATURE PAGE TO AMENDED AND RESTATED
CERTIFICATE OF INCORPORATION]




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AMENDED AND RESTATED CERTIFICATE OF INCORPORATION OF SENOMYX, INC.

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Exhibit 3.2


AMENDED AND RESTATED BYLAWS
OF
SENOMYX, INC.
ARTICLE I
OFFICES

        Section 1.    Registered Office.     The registered office of the corporation in the State of Delaware shall be in the City of Dover, County of Kent.

        Section 2.    Other Offices.     The corporation shall also have and maintain an office or principal place of business at such place as may be fixed by the Board of Directors, and may also have offices at such other places, both within and without the State of Delaware as the Board of Directors may from time to time determine or the business of the corporation may require.

ARTICLE II

CORPORATE SEAL

        Section 3.    Corporate Seal.     The Board of Directors may adopt a corporate seal. The corporate seal shall consist of a die bearing the name of the corporation and the inscription, "Corporate Seal-Delaware." Said seal may be used by causing it or a facsimile thereof to be impressed or affixed or reproduced or otherwise.

ARTICLE III

STOCKHOLDERS' MEETINGS

        Section 4.    Place Of Meetings.     Meetings of the stockholders of the corporation may be held at such place, either within or without the State of Delaware, as may be determined from time to time by the Board of Directors. The Board of Directors may, in its sole discretion, determine that the meeting shall not be held at any place, but may instead be held solely by means of remote communication as provided under the Delaware General Corporation Law (" DGCL ").

        Section 5.    Annual Meetings.     

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2


        Section 6.    Special Meetings.     

3


        Section 7.    Notice Of Meetings.     Except as otherwise provided by law, notice, given in writing or by electronic transmission, of each meeting of stockholders shall be given not less than 10 nor more than 60 days before the date of the meeting to each stockholder entitled to vote at such meeting, such notice to specify the place, if any, date and hour, in the case of special meetings, the purpose or purposes of the meeting, and the means of remote communications, if any, by which stockholders and proxy holders may be deemed to be present in person and vote at any such meeting. If mailed, notice is deemed given when deposited in the United States mail, postage prepaid, directed to the stockholder at such stockholder's address as it appears on the records of the corporation. If sent via electronic transmission, notice is deemed given as of the sending time recorded at the time of transmission. Notice of the time, place, if any, and purpose of any meeting of stockholders may be waived in writing, signed by the person entitled to notice thereof, or by electronic transmission by such person, either before or after such meeting, and will be waived by any stockholder by his attendance thereat in person, by remote communication, if applicable, or by proxy, except when the stockholder attends a meeting for the express purpose of objecting, at the beginning of the meeting, to the transaction of any business because the meeting is not lawfully called or convened. Any stockholder so waiving notice of such meeting shall be bound by the proceedings of any such meeting in all respects as if due notice thereof had been given.

        Section 8.    Quorum.     At all meetings of stockholders, except where otherwise provided by statute or by the Amended and Restated Certificate of Incorporation, or by these Amended and Restated Bylaws, the presence, in person, by remote communication, if applicable, or by proxy duly authorized, of the holders of a majority of the outstanding shares of stock entitled to vote shall constitute a quorum for the transaction of business. In the absence of a quorum, any meeting of stockholders may be adjourned, from time to time, either by the chairman of the meeting or by vote of the holders of a majority of the shares represented thereat, but no other business shall be transacted at such meeting. The stockholders present at a duly called or convened meeting, at which a quorum is present, may continue to transact business until adjournment, notwithstanding the withdrawal of enough stockholders to leave less than a quorum. Except as otherwise provided by law or by applicable stock exchange or Nasdaq rules, or by the Amended and Restated Certificate of Incorporation or these Amended and Restated Bylaws, in all matters other than the election of directors, the affirmative vote of the majority of shares present in person, by remote communication, if applicable, or represented by proxy at the meeting and entitled to vote generally on the subject matter shall be the act of the stockholders. Except as otherwise provided by statute, the Amended and Restated Certificate of Incorporation or these Amended and Restated Bylaws, directors shall be elected by a plurality of the votes of the shares present in person, by remote communication, if applicable, or represented by proxy at the meeting and entitled to vote generally on the election of directors. Where a separate vote by a class or classes or series is required, except where otherwise provided by the statute or by the Amended and Restated Certificate of Incorporation or these Amended and Restated Bylaws, a majority of the outstanding shares of such class or classes or series, present in person, by remote communication, if applicable, or represented by proxy duly authorized, shall constitute a quorum entitled to take action with respect to that vote on that matter. Except where otherwise provided by statute or by the Amended and Restated

4



Certificate of Incorporation or these Amended and Restated Bylaws, the affirmative vote of the majority (plurality, in the case of the election of directors) of shares of such class or classes or series present in person, by remote communication, if applicable, or represented by proxy at the meeting shall be the act of such class or classes or series.

        Section 9.    Adjournment And Notice Of Adjourned Meetings.     Any meeting of stockholders, whether annual or special, may be adjourned from time to time either by the chairman of the meeting or by the vote of a majority of the shares present in person, by remote communication, if applicable, or represented by proxy at the meeting. When a meeting is adjourned to another time or place, if any, notice need not be given of the adjourned meeting if the time and place, if any, thereof are announced at the meeting at which the adjournment is taken. At the adjourned meeting, the corporation may transact any business which might have been transacted at the original meeting. If the adjournment is for more than 30 days or if after the adjournment a new record date is fixed for the adjourned meeting, a notice of the adjourned meeting shall be given to each stockholder of record entitled to vote at the meeting.

        Section 10.    Voting Rights.     For the purpose of determining those stockholders entitled to vote at any meeting of the stockholders, except as otherwise provided by law, only persons in whose names shares stand on the stock records of the corporation on the record date, as provided in Section 12 of these Amended and Restated Bylaws, shall be entitled to vote at any meeting of stockholders. Every person entitled to vote shall have the right to do so either in person, by remote communication, if applicable, or by an agent or agents authorized by a proxy granted in accordance with Delaware law. An agent so appointed need not be a stockholder. No proxy shall be voted after three years from its date of creation unless the proxy provides for a longer period.

        Section 11.    Joint Owners Of Stock.     If shares or other securities having voting power stand of record in the names of two or more persons, whether fiduciaries, members of a partnership, joint tenants, tenants in common, tenants by the entirety, or otherwise, or if two or more persons have the same fiduciary relationship respecting the same shares, unless the Secretary is given written notice to the contrary and is furnished with a copy of the instrument or order appointing them or creating the relationship wherein it is so provided, their acts with respect to voting shall have the following effect: (a) if only one votes, his act binds all; (b) if more than one votes, the act of the majority so voting binds all; (c) if more than one votes, but the vote is evenly split on any particular matter, each faction may vote the securities in question proportionally, or may apply to the Delaware Court of Chancery for relief as provided in the DGCL, Section 217(b). If the instrument filed with the Secretary shows that any such tenancy is held in unequal interests, a majority or even-split for the purpose of subsection (c) shall be a majority or even-split in interest.

        Section 12.    List Of Stockholders.     The Secretary shall prepare and make, at least 10 days before every meeting of stockholders, a complete list of the stockholders entitled to vote at said meeting, arranged in alphabetical order, showing the address of each stockholder and the number of shares registered in the name of each stockholder. Such list shall be open to the examination of any stockholder, for any purpose germane to the meeting, (a) on a reasonably accessible electronic network, provided that the information required to gain access to such list is provided with the notice of the meeting, or (b) during ordinary business hours, at the principal place of business of the corporation. In the event that the corporation determines to make the list available on an electronic network, the corporation may take reasonable steps to ensure that such information is available only to stockholders of the corporation. The list shall be open to examination of any stockholder during the time of the meeting as provided by law.

        Section 13.    Action Without Meeting.     No action shall be taken by the stockholders except at an annual or special meeting of stockholders called in accordance with these Amended and Restated

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Bylaws, and no action shall be taken by the stockholders by written consent or by electronic transmission.

        Section 14.    Organization.     

ARTICLE IV

DIRECTORS

        Section 15.    Number And Term Of Office.     The authorized number of directors of the corporation shall be fixed in accordance with the Amended and Restated Certificate of Incorporation. Directors need not be stockholders unless so required by the Amended and Restated Certificate of Incorporation. If for any cause, the directors shall not have been elected at an annual meeting, they may be elected as soon thereafter as convenient at a special meeting of the stockholders called for that purpose in the manner provided in these Amended and Restated Bylaws.

        Section 16.    Powers.     The powers of the corporation shall be exercised, its business conducted and its property controlled by the Board of Directors, except as may be otherwise provided by statute or by the Amended and Restated Certificate of Incorporation.

        Section 17.    Board of Directors.     Subject to the rights of the holders of any series of Preferred Stock to elect additional directors under specified circumstances, directors shall be elected at each annual meeting of stockholders for a term of one year. Each director shall serve until his successor is duly elected and qualified or until his death, resignation or removal. No decrease in the number of directors constituting the Board of Directors shall shorten the term of any incumbent director.

        Section 18.    Vacancies.     Unless otherwise provided in the Amended and Restated Certificate of Incorporation and subject to the rights of the holders of any series of Preferred Stock, any vacancies on the Board of Directors resulting from death, resignation, disqualification, removal or other causes and any newly created directorships resulting from any increase in the number of directors shall, unless the

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Board of Directors determines by resolution that any such vacancies or newly created directorships shall be filled by stockholders, be filled only by the affirmative vote of a majority of the directors then in office, even though less than a quorum of the Board of Directors. Any director elected in accordance with the preceding sentence shall hold office for the remainder of the full term of the director for which the vacancy was created or occurred and until such director's successor shall have been elected and qualified. A vacancy in the Board of Directors shall be deemed to exist under this Section 18 in the case of the death, removal or resignation of any director.

        Section 19.    Resignation.     Any director may resign at any time by delivering his or her notice in writing or by electronic transmission to the Secretary, such resignation to specify whether it will be effective at a particular time, upon receipt by the Secretary or at the pleasure of the Board of Directors. If no such specification is made, it shall be deemed effective at the pleasure of the Board of Directors. When one or more directors shall resign from the Board of Directors, effective at a future date, a majority of the directors then in office, including those who have so resigned, shall have power to fill such vacancy or vacancies, the vote thereon to take effect when such resignation or resignations shall become effective, and each director so chosen shall hold office for the unexpired portion of the term of the director whose place shall be vacated and until his successor shall have been duly elected and qualified.

        Section 20.    Removal.     Subject to any limitation imposed by law, the Board of Directors or any individual director may be removed from office at any time with or without cause by the affirmative vote of the holders of a majority of the voting power of all the then-outstanding shares of capital stock of the corporation, entitled to vote at an election of directors, voting together as a single class.

        Section 21.    Meetings.     

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        Section 22.    Quorum And Voting.     

        Section 23.    Action Without Meeting.     Unless otherwise restricted by the Amended and Restated Certificate of Incorporation or these Amended and Restated Bylaws, any action required or permitted to be taken at any meeting of the Board of Directors or of any committee thereof may be taken without a meeting, if all members of the Board of Directors or committee, as the case may be, consent thereto in writing or by electronic transmission, and such writing or writings or transmission or transmissions are filed with the minutes of proceedings of the Board of Directors or committee. Such filing shall be in paper form if the minutes are maintained in paper form and shall be in electronic form if the minutes are maintained in electronic form.

        Section 24.    Fees And Compensation.     Directors shall be entitled to such compensation for their services as may be approved by the Board of Directors, including, if so approved, by resolution of the Board of Directors, a fixed sum and expenses of attendance, if any, for attendance at each regular or special meeting of the Board of Directors and at any meeting of a committee of the Board of Directors. Nothing herein contained shall be construed to preclude any director from serving the corporation in any other capacity as an officer, agent, employee, or otherwise and receiving compensation therefor.

        Section 25.    Committees.     

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        Section 26.    Organization.     At every meeting of the directors, the Chairman of the Board of Directors, or, if a Chairman has not been appointed or is absent, the President (if a director), or if the President is absent, the most senior Vice President (if a director), or, in the absence of any such person, a chairman of the meeting chosen by a majority of the directors present, shall preside over the meeting. The Secretary, or in his absence, any Assistant Secretary directed to do so by the President, shall act as secretary of the meeting.

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ARTICLE V

OFFICERS

        Section 27.    Officers Designated.     The officers of the corporation shall include, if and when designated by the Board of Directors, the Chairman of the Board of Directors, the Chief Executive Officer, the President, one or more Vice Presidents, the Secretary, the Chief Financial Officer, the Treasurer and the Controller, all of whom shall be elected at the annual organizational meeting of the Board of Directors. The Board of Directors may also appoint one or more Assistant Secretaries, Assistant Treasurers, Assistant Controllers and such other officers and agents with such powers and duties as it shall deem necessary. The Board of Directors may assign such additional titles to one or more of the officers as it shall deem appropriate. Any one person may hold any number of offices of the corporation at any one time unless specifically prohibited therefrom by law. The salaries and other compensation of the officers of the corporation shall be fixed by or in the manner designated by the Board of Directors.

        Section 28.    Tenure And Duties Of Officers.     

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        Section 29.    Delegation Of Authority.     The Board of Directors may from time to time delegate the powers or duties of any officer to any other officer or agent, notwithstanding any provision hereof.

        Section 30.    Resignations.     Any officer may resign at any time by giving notice in writing or by electronic transmission to the Board of Directors or to the President or to the Secretary. Any such resignation shall be effective when received by the person or persons to whom such notice is given, unless a later time is specified therein, in which event the resignation shall become effective at such later time. Unless otherwise specified in such notice, the acceptance of any such resignation shall not be necessary to make it effective. Any resignation shall be without prejudice to the rights, if any, of the corporation under any contract with the resigning officer.

        Section 31.    Removal.     Any officer may be removed from office at any time, either with or without cause, by the affirmative vote of a majority of the directors in office at the time, or by the unanimous written consent of the directors in office at the time, or by any committee or superior officers upon whom such power of removal may have been conferred by the Board of Directors.

ARTICLE VI

EXECUTION OF CORPORATE INSTRUMENTS AND VOTING OF SECURITIES
OWNED BY THE CORPORATION

        Section 32.    Execution Of Corporate Instruments.     The Board of Directors may, in its discretion, determine the method and designate the signatory officer or officers, or other person or persons, to execute on behalf of the corporation any corporate instrument or document, or to sign on behalf of the corporation the corporate name without limitation, or to enter into contracts on behalf of the corporation, except where otherwise provided by law or these Amended and Restated Bylaws, and such execution or signature shall be binding upon the corporation.

        All checks and drafts drawn on banks or other depositaries on funds to the credit of the corporation or in special accounts of the corporation shall be signed by such person or persons as the Board of Directors shall authorize so to do.

        Unless authorized or ratified by the Board of Directors or within the agency power of an officer, no officer, agent or employee shall have any power or authority to bind the corporation by any contract or engagement or to pledge its credit or to render it liable for any purpose or for any amount.

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        Section 33.    Voting Of Securities Owned By The Corporation.     All stock and other securities of other corporations owned or held by the corporation for itself, or for other parties in any capacity, shall be voted, and all proxies with respect thereto shall be executed, by the person authorized so to do by resolution of the Board of Directors, or, in the absence of such authorization, by the Chairman of the Board of Directors, the Chief Executive Officer, the President, or any Vice President.

ARTICLE VII

SHARES OF STOCK

        Section 34.    Form And Execution Of Certificates.     Certificates for the shares of stock of the corporation shall be in such form as is consistent with the Amended and Restated Certificate of Incorporation and applicable law. Every holder of stock in the corporation shall be entitled to have a certificate signed by or in the name of the corporation by the Chairman of the Board of Directors, or the President or any Vice President and by the Treasurer or Assistant Treasurer or the Secretary or Assistant Secretary, certifying the number of shares owned by him in the corporation. Any or all of the signatures on the certificate may be facsimiles. In case any officer, transfer agent, or registrar who has signed or whose facsimile signature has been placed upon a certificate shall have ceased to be such officer, transfer agent, or registrar before such certificate is issued, it may be issued with the same effect as if he were such officer, transfer agent, or registrar at the date of issue. Each certificate shall state upon the face or back thereof, in full or in summary, all of the powers, designations, preferences, and rights, and the limitations or restrictions of the shares authorized to be issued or shall, except as otherwise required by law, set forth on the face or back a statement that the corporation will furnish without charge to each stockholder who so requests the powers, designations, preferences and relative, participating, optional, or other special rights of each class of stock or series thereof and the qualifications, limitations or restrictions of such preferences and/or rights. Within a reasonable time after the issuance or transfer of uncertificated stock, the corporation shall send to the registered owner thereof a written notice containing the information required to be set forth or stated on certificates pursuant to this section or otherwise required by law or with respect to this section a statement that the corporation will furnish without charge to each stockholder who so requests the powers, designations, preferences and relative participating, optional or other special rights of each class of stock or series thereof and the qualifications, limitations or restrictions of such preferences and/or rights.

        Section 35.    Lost Certificates.     A new certificate or certificates shall be issued in place of any certificate or certificates theretofore issued by the corporation alleged to have been lost, stolen, or destroyed, upon the making of an affidavit of that fact by the person claiming the certificate of stock to be lost, stolen, or destroyed. The corporation may require, as a condition precedent to the issuance of a new certificate or certificates, the owner of such lost, stolen, or destroyed certificate or certificates, or the owner's legal representative, to agree to indemnify the corporation in such manner as it shall require or to give the corporation a surety bond in such form and amount as it may direct as indemnity against any claim that may be made against the corporation with respect to the certificate alleged to have been lost, stolen, or destroyed.

        Section 36.    Transfers.     

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        Section 37.    Fixing Record Dates.     

        Section 38.    Registered Stockholders.     The corporation shall be entitled to recognize the exclusive right of a person registered on its books as the owner of shares to receive dividends, and to vote as such owner, and shall not be bound to recognize any equitable or other claim to or interest in such share or shares on the part of any other person whether or not it shall have express or other notice thereof, except as otherwise provided by the laws of Delaware.

ARTICLE VIII

OTHER SECURITIES OF THE CORPORATION

        Section 39.    Execution Of Other Securities.     All bonds, debentures and other corporate securities of the corporation, other than stock certificates (covered in Section 34), may be signed by the Chairman of the Board of Directors, the President or any Vice President, or such other person as may be authorized by the Board of Directors, and the corporate seal impressed thereon or a facsimile of such seal imprinted thereon and attested by the signature of the Secretary or an Assistant Secretary, or the Chief Financial Officer or Treasurer or an Assistant Treasurer; provided, however, that where any such bond, debenture or other corporate security shall be authenticated by the manual signature, or where permissible facsimile signature, of a trustee under an indenture pursuant to which such bond, debenture or other corporate security shall be issued, the signatures of the persons signing and attesting the corporate seal on such bond, debenture or other corporate security may be the imprinted facsimile of the signatures of such persons. Interest coupons appertaining to any such bond, debenture or other corporate security, authenticated by a trustee as aforesaid, shall be signed by the Treasurer or an Assistant Treasurer of the corporation or such other person as may be authorized by the Board of Directors, or bear imprinted thereon the facsimile signature of such person. In case any officer who shall have signed or attested any bond, debenture or other corporate security, or whose facsimile signature shall appear thereon or on any such interest coupon, shall have ceased to be such officer before the bond, debenture or other corporate security so signed or attested shall have been delivered, such bond, debenture or other corporate security nevertheless may be adopted by the corporation and

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issued and delivered as though the person who signed the same or whose facsimile signature shall have been used thereon had not ceased to be such officer of the corporation.

ARTICLE IX

DIVIDENDS

        Section 40.    Declaration Of Dividends.     Dividends upon the capital stock of the corporation, subject to the provisions of the Amended and Restated Certificate of Incorporation and applicable law, if any, may be declared by the Board of Directors pursuant to law at any regular or special meeting. Dividends may be paid in cash, in property, or in shares of the capital stock, subject to the provisions of the Amended and Restated Certificate of Incorporation and applicable law.

        Section 41.    Dividend Reserve.     Before payment of any dividend, there may be set aside out of any funds of the corporation available for dividends such sum or sums as the Board of Directors from time to time, in their absolute discretion, think proper as a reserve or reserves to meet contingencies, or for equalizing dividends, or for repairing or maintaining any property of the corporation, or for such other purpose as the Board of Directors shall think conducive to the interests of the corporation, and the Board of Directors may modify or abolish any such reserve in the manner in which it was created.

ARTICLE X

FISCAL YEAR

        Section 42.    Fiscal Year.     The fiscal year of the corporation shall be fixed by resolution of the Board of Directors.

ARTICLE XI

INDEMNIFICATION

        Section 43.    Indemnification Of Directors, Executive Officers, Other Officers, Employees And Other Agents.     

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        Notwithstanding the foregoing, unless otherwise determined pursuant to paragraph (e) of this Section 43, no advance shall be made by the corporation to an executive officer of the corporation (except by reason of the fact that such executive officer is or was a director of the corporation in which event this paragraph shall not apply) in any action, suit or proceeding, whether civil, criminal, administrative or investigative, if a determination is reasonably and promptly made (i) by a majority vote of directors who were not parties to the proceeding, even if not a quorum, or (ii) by a committee of such directors designated by a majority vote of such directors, even though less than a quorum, or (iii) if there are no such directors, or such directors so direct, by independent legal counsel in a written opinion, that the facts known to the decision-making party at the time such determination is made demonstrate clearly and convincingly that such person acted in bad faith or in a manner that such person did not believe to be in or not opposed to the best interests of the corporation.

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ARTICLE XII

NOTICES

        Section 44.    Notices.     

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ARTICLE XIII

AMENDMENTS

        Section 45.    Bylaw Amendments.     Subject to Section 43(h), the Board of Directors is expressly empowered to adopt, amend or repeal the Bylaws of the corporation. Any adoption, amendment or repeal of the Bylaws of the corporation by the Board of Directors shall require the approval of a majority of the authorized number of directors. The stockholders shall also have power to adopt, amend or repeal the Bylaws of the corporation; provided, however, that, in addition to any vote of the holders of any class or series of stock of the corporation required by law or by the Amended and Restated Certificate of Incorporation, the affirmative vote of the holders of at least 66 2 / 3 % of the voting power of all of the then-outstanding shares of the capital stock of the corporation entitled to vote generally at an election of directors, voting together as a single class, shall be required to adopt, amend or repeal any provision of the Bylaws of the corporation.

ARTICLE XIV

LOANS TO OFFICERS OR EMPLOYEES

        Section 46.    Loans To Officers Or Employees.     Except as otherwise prohibited by applicable law, the corporation may lend money to, or guarantee any obligation of, or otherwise assist any officer or other employee of the corporation or of its subsidiaries, including any officer or employee who is a director of the corporation or its subsidiaries, whenever, in the judgment of the Board of Directors, such loan, guarantee or assistance may reasonably be expected to benefit the corporation. The loan, guarantee or other assistance may be with or without interest and may be unsecured, or secured in such manner as the Board of Directors shall approve, including, without limitation, a pledge of shares of stock of the corporation. Nothing in these Amended and Restated Bylaws shall be deemed to deny, limit or restrict the powers of guaranty or warranty of the corporation at common law or under any statute.

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AMENDED AND RESTATED BYLAWS OF SENOMYX, INC. ARTICLE I OFFICES

Exhibit 4.1

NUMBER   [SENOMYX®, INC. LOGO]   SHARES

SNMX

 

 

 

 

INCORPORATED UNDER THE LAWS OF THE STATE OF DELAWARE

 

 

 

SEE REVERSE FOR CERTAIN DEFINITIONS
CUSIP 81724Q 10 7

This Certifies that

 

 

 

 

SPECIMEN

 

 

is the record holder of

 

 

FULLY PAID AND NON-ASSESSABLE SHARES OF COMMON STOCK, $.001 PAR VALUE, OF

------------ Senomyx®, Inc. ------------

transferable on the books of the Corporation by the holder hereof in person or by duly authorized attorney upon surrender of this certificate properly endorsed. This certificate is not valid until countersigned by the Transfer Agent and registered by the Registrar.

/s/ Harry J. Leonhardt       /s/ Kent Snyder

VICE PRESIDENT, GENERAL COUNSEL AND CORPORATE SECRETARY

 

[SEAL]

 

PRESIDENT AND CHIEF EXECUTIVE OFFICER

COUNTERSIGNED AND REGISTERED:
    MELLON INVESTOR SERVICES LLC
        TRANSFER AGENT AND REGISTRAR

BY

            AUTHORIZED SIGNATURE


Senomyx™, Inc.

        The Corporation shall furnish without charge to each stockholder who so requests a statement of the powers, designations, preferences and relative, participating, optional, or other special rights of each class of stock of the Corporation or series thereof and the qualifications, limitations or restrictions of such preferences and/or rights. Such requests shall be made to the Corporation's Secretary at the principle office of the Corporation.

        KEEP THIS CERTIFICATE IN A SAFE PLACE. IF IT IS LOST, STOLEN, OR DESTROYED THE CORPORATION WILL REQUIRE A BOND OF INDEMNITY AS A CONDITION TO THE ISSUANCE OF A REPLACEMENT CERTIFICATE.

        The following abbreviations, when used in the inscription on the face of this certificate, shall be construed as though they were written out in full according to applicable laws or regulations:

TEN COM as tenants in common UNIF GIFT MIN ACT—  
TEN ENT as tenants by the entireties                       Custodian             
JT TEN as joint tenants with right of   (Cust)                    (Minor)
    survivorship and not as tenants in common   under Uniform Gifts to Minors Act
                                     
(State)

 

 

 

UNIF TRF MIN ACT—

 
                            Custodian (until age      )             
        (Cust)                    (Minor)
        under Uniform Transfers to Minors Act
                                     
(State)

Additional abbreviations may also be used though not in the above list.

         For Value Received,      hereby sell(s), assign(s) and transfer(s) unto

PLEASE INSERT SOCIAL SECURITY OR OTHER
IDENTIFYING NUMBER OF ASSIGNEE
 
    
 

(PLEASE PRINT OR TYPEWRITE NAME AND ADDRESS INCLUDING ZIP CODE OF ASSIGNEE)





Shares of the common stock represented by the within Certificate, and do hereby irrevocably constitute and appoint




Attorney to transfer the said stock on the books of the within-named Corporation with full power of substitution in the premises.

Dated:                  X
   
    X
   

 

 


NOTICE: THE SIGNATURE TO THIS ASSIGNMENT MUST CORRESPOND WITH THE NAME AS WRITTEN UPON THE FACE OF THE CERTIFICATE IN EVERY PARTICULAR, WITHOUT ALTERATION OR ENLARGEMENT OR ANY CHANGE WHATEVER.

Signature(s) Guaranteed

 

 
By      
 
   
THE SIGNATURE(S) SHOULD BE GUARANTEED BY AN ELIGIBLE GUARANTOR INSTITUTION (BANKS, STOCK BROKERS, SAVINGS AND LOAN ASSOCIATIONS AND CREDIT UNIONS WITH MEMBERSHIP IN AN APPROVED SIGNATURE GUARANTEE MEDALLION PROGRAM), PURSUANT TO S.E.C. RULE 17Ad-15.
   



Exhibit 5.1

[COOLEY GODWARD LLP LETTERHEAD]

June 8, 2004

Senomyx, Inc.
11099 North Torrey Pines Road
La Jolla, CA 92037

Dear Ladies and Gentlemen:

        You have requested our opinion with respect to certain matters in connection with the filing by Senomyx, Inc. (the "Company") of a Registration Statement (No. 333-113998) on Form S-1 (the "Registration Statement") with the Securities and Exchange Commission, including a related prospectus filed with the Registration Statement (the "Prospectus"), covering an underwritten public offering of up to 6,900,000 shares (the "Shares") of the Company's common stock, par value $.001, including 900,000 shares of common stock that may be sold pursuant to the exercise of an over-allotment option.

        In connection with this opinion, we have examined and relied upon the Registration Statement and Prospectus, the Company's Amended and Restated Certificate of Incorporation and Bylaws, its form of Certificate of Amendment to Amended and Restated Certificate of Incorporation to be filed prior to effectiveness of the Registration Statement and its forms of Amended and Restated Certificate of Incorporation and Amended and Restated Bylaws to be effective upon the closing of the offering of the Shares in accordance with the Registration Statement and Prospectus, and the originals or copies certified to our satisfaction of such records, documents, certificates, memoranda and other instruments as in our judgment are necessary or appropriate to enable us to render the opinion expressed below.

        On the basis of the foregoing, and in reliance thereon, we are of the opinion that the Shares, when sold and issued in accordance with the Registration Statement and the Prospectus will be validly issued, fully paid and nonassessable.

        We consent to the reference to our firm under the caption "Legal Matters" in the Prospectus and to the filing of this opinion as an exhibit to the Registration Statement.

Very truly yours,    
         
Cooley Godward LLP    
         
         
By:   /s/   THOMAS A. COLL       
Thomas A. Coll
   



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Exhibit 10.1


SENOMYX, INC.
INDEMNITY AGREEMENT

         THIS INDEMNITY AGREEMENT (this " Agreement ") is made and entered into this    day of                        , 2004 by and between SENOMYX,  INC. , a Delaware corporation (the " Company "), and                        (" Agent ").

RECITALS

         WHEREAS, Agent performs a valuable service to the Company in                        capacity as                        of the Company;

         WHEREAS, the stockholders of the Company have adopted Amended and Restated Bylaws, as amended (the " Bylaws ") providing for the indemnification of the directors, officers, employees and other agents of the Company, including persons serving at the request of the Company in such capacities with other corporations or enterprises, as authorized by the Delaware General Corporation Law (the " DGCL ");

         WHEREAS, the Bylaws and the DGCL, by their non-exclusive nature, permit contracts between the Company and its agents, officers, employees and other agents with respect to indemnification of such persons; and

         WHEREAS, in order to induce Agent to continue to serve as                        of the Company, the Company has determined and agreed to enter into this Agreement with Agent;

         NOW, THEREFORE, in consideration of Agent's continued service as                        after the date hereof, the parties hereto agree as follows:

AGREEMENT

        1.    Services to the Company.     Agent will serve, at the will of the Company or under separate contract, if any such contract exists, as                        of the Company or as a director, executive officer or other fiduciary of an affiliate of the Company (including any employee benefit plan of the Company) faithfully and to the best of Agent's ability so long as Agent is duly elected and qualified in accordance with the provisions of the Bylaws or other applicable charter documents of the Company or such affiliate; provided, however, that Agent may at any time and for any reason resign from such position (subject to any contractual obligation that Agent may have assumed apart from this Agreement) and that the Company or any affiliate shall have no obligation under this Agreement to continue Agent in any such position.

        2.    Indemnity of Agent.     The Company hereby agrees to hold harmless and indemnify Agent to the fullest extent authorized or permitted by the provisions of the Bylaws and the DGCL, as the same may be amended from time to time (but only to the extent that such amendment permits the Company to provide broader indemnification rights than the Bylaws or the DGCL permitted prior to adoption of such amendment).

        3.    Additional Indemnity.     In addition to and not in limitation of the indemnification otherwise provided for herein, and subject only to the exclusions set forth in Section 4 hereof, the Company hereby further agrees to hold harmless and indemnify Agent:


        4.    Limitations on Additional Indemnity.     No indemnity pursuant to Section 3 hereof shall be paid by the Company:

        5.    Continuation of Indemnity.     All agreements and obligations of the Company contained herein shall continue during the period Agent is a director, officer, employee or other agent of the Company (or is or was serving at the request of the Company as a director, officer, employee or other agent of another corporation, partnership, joint venture, trust, employee benefit plan or other enterprise) and shall continue thereafter so long as Agent shall be subject to any possible claim or threatened, pending or completed action, suit or proceeding, whether civil, criminal, arbitrational, administrative or investigative, by reason of the fact that Agent was serving in the capacity referred to herein.

        6.    Partial Indemnification.     Agent shall be entitled under this Agreement to indemnification by the Company for a portion of the expenses (including attorneys' fees), witness fees, damages, judgments, fines and amounts paid in settlement and any other amounts that Agent becomes legally obligated to pay in connection with any action, suit or proceeding referred to in Section 3 hereof even if not entitled hereunder to indemnification for the total amount thereof, and the Company shall indemnify Agent for the portion thereof to which Agent is entitled.

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        7.    Notification and Defense of Claim.     Not later than 30 days after receipt by Agent of notice of the commencement of any action, suit or proceeding, Agent will, if a claim in respect thereof is to be made against the Company under this Agreement, notify the Company of the commencement thereof; but the omission so to notify the Company will not relieve it from any liability which it may have to Agent otherwise than under this Agreement. With respect to any such action, suit or proceeding as to which Agent notifies the Company of the commencement thereof:

        8.    Expenses.     The Company shall advance, prior to the final disposition of any proceeding, promptly following request therefor, all expenses incurred by Agent in connection with such proceeding upon receipt of an undertaking by or on behalf of Agent to repay said amounts if it shall be determined ultimately that Agent is not entitled to be indemnified under the provisions of this Agreement, the Bylaws, the DGCL or otherwise.

        9.    Enforcement.     Any right to indemnification or advances granted by this Agreement to Agent shall be enforceable by or on behalf of Agent in any court of competent jurisdiction if (i) the claim for indemnification or advances is denied, in whole or in part, or (ii) no disposition of such claim is made within 90 days of request therefor. Agent, in such enforcement action, if successful in whole or in part, shall be entitled to be paid also the expense of prosecuting Agent's claim. It shall be a defense to any action for which a claim for indemnification is made under Section 3 hereof (other than an action brought to enforce a claim for expenses pursuant to Section 8 hereof, provided that the required undertaking has been tendered to the Company) that Agent is not entitled to indemnification because of the limitations set forth in Section 4 hereof. Neither the failure of the Company (including its Board of Directors or its stockholders) to have made a determination prior to the commencement of such enforcement action that indemnification of Agent is proper in the circumstances, nor an actual determination by the Company (including its Board of Directors or its stockholders) that such indemnification is improper shall be a defense to the action or create a presumption that Agent is not entitled to indemnification under this Agreement or otherwise.

3



        10.    Subrogation.     In the event of payment under this Agreement, the Company shall be subrogated to the extent of such payment to all of the rights of recovery of Agent, who shall execute all documents required and shall do all acts that may be necessary to secure such rights and to enable the Company effectively to bring suit to enforce such rights.

        11.    Non-Exclusivity of Rights.     The rights conferred on Agent by this Agreement shall not be exclusive of any other right which Agent may have or hereafter acquire under any statute, provision of the Company's Amended and Restated Certificate of Incorporation or Bylaws, agreement, vote of stockholders or directors, or otherwise, both as to action in Agent's official capacity and as to action in another capacity while holding office.

        12.    Survival of Rights.     

        13.    Separability.     Each of the provisions of this Agreement is a separate and distinct agreement and independent of the others, so that if any provision hereof shall be held to be invalid for any reason, such invalidity or unenforceability shall not affect the validity or enforceability of the other provisions hereof. Furthermore, if this Agreement shall be invalidated in its entirety on any ground, then the Company shall nevertheless indemnify Agent to the fullest extent provided by the Bylaws, the DGCL or any other applicable law.

        14.    Governing Law.     This Agreement shall be interpreted and enforced in accordance with the laws of the State of Delaware.

        15.    Amendment and Termination.     No amendment, modification, termination or cancellation of this Agreement shall be effective unless in writing signed by both parties hereto.

        16.    Identical Counterparts; Facsimile.     This Agreement may be executed in one or more counterparts, each of which shall for all purposes be deemed to be an original but all of which together shall constitute but one and the same Agreement. Only one such counterpart need be produced to evidence the existence of this Agreement. Facsimile signatures shall be as effective as original signatures.

        17.    Headings.     The headings of the sections of this Agreement are inserted for convenience only and shall not be deemed to constitute part of this Agreement or to affect the construction hereof.

        18.    Notices.     All notices, requests, demands and other communications hereunder shall be in writing and shall be deemed to have been duly given (i) upon delivery if delivered by hand to the party to whom such communication was directed or (ii) upon the third business day after the date on which such communication was mailed if mailed by certified or registered mail with postage prepaid:

4


or to such other address as may have been furnished to Agent by the Company.

5



         IN WITNESS WHEREOF, the parties hereto have executed this Agreement on and as of the day and year first above written.

    SENOMYX, INC.

 

 

By:

 

 
       
    Title:    
       

 

 

AGENT

 

 

 

 


    Address:    

 

 



 

 


[SIGNATURE PAGE TO INDEMNITY AGREEMENT]




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SENOMYX, INC. INDEMNITY AGREEMENT

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Exhibit 10.2


SENOMYX, INC. 2004 EQUITY INCENTIVE PLAN
INITIALLY ADOPTED BY THE BOARD OF DIRECTORS ON JANUARY 30, 1999, AND
APPROVED BY STOCKHOLDERS ON FEBRUARY 26, 1999, AS THE 1999 EQUITY INCENTIVE PLAN
AMENDMENT AND RESTATEMENT ADOPTED BY THE BOARD OF DIRECTORS ON APRIL 30, 2004
AND APPROVED BY STOCKHOLDERS ON JUNE 7, 2004
TERMINATION DATE: APRIL 29, 2014

1.     PURPOSES.

        (a)    Amendment and Restatement.     The Plan amends and restates the Senomyx, Inc. 1999 Equity Incentive Plan (the " Prior Plan ") as in effect immediately prior to the effective date of this Plan. All outstanding awards granted under the Prior Plan shall remain subject to the terms of the Prior Plan. All options granted subsequent to the effective date of this Plan shall be subject to the terms of this Plan. All share numbers in this Plan have been adjusted to give affect to a 4-for-7 reverse stock split of the Company's Common Stock to be effected prior to IPO Date (the " Reverse Split "). In the event that the Reverse Split is not effected, or is not effected at a 4-for-7 ratio, all share numbers in this Plan shall be adjusted accordingly.

        (b)    Eligible Stock Award Recipients.     The persons eligible to receive Stock Awards are Employees, Directors and Consultants. Only Non-Employee Directors are eligible to receive Options under Section 8.

        (c)    Available Stock Awards.     The Plan provides for the grant of the following Stock Awards: (i) Incentive Stock Options, (ii) Nonstatutory Stock Options, (iii) Stock Purchase Awards, (iv) Stock Bonus Awards, (v) Stock Appreciation Rights, (vi) Stock Unit Awards and (vii) Other Stock Awards.

        (d)    General Purpose.     The Company, by means of the Plan, seeks to secure and retain the services of the group of persons eligible to receive Stock Awards, to provide incentives for such persons to exert maximum efforts for the success of the Company and its Affiliates and to provide a means by which eligible recipients of Stock Awards may be given an opportunity to benefit from increases in the value of the Common Stock.

2.     DEFINITIONS.

         (a)    " Affiliate " means any parent corporation or subsidiary corporation of the Company, whether now or hereafter existing, as those terms are defined in Sections 424(e) and (f), respectively, of the Code.

         (b)    " Annual Grant " means an Option granted to Non-Employee Directors who meet the specified criteria pursuant to Section 8(a)(iii).

         (c)    " Annual Meeting " means the annual meeting of the stockholders of the Company.

         (d)    " Board " means the Board of Directors of the Company.

         (e)    " Capitalization Adjustment " has the meaning ascribed to that term in Section 12(a).

         (f)     " Cause " means, with respect to a Participant, the occurrence of any of the following: (i) such Participant's commission of any felony or any crime involving fraud, dishonesty or moral turpitude under the laws of the United States or any state thereof; (ii) such Participant's attempted commission of, or participation in, a fraud or act of dishonesty against the Company; (iii) such Participant's intentional and material violation of any contract or agreement between the Participant and the

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Company or any statutory duty owed to the Company; (iv) such Participant's unauthorized use or disclosure of the Company's confidential information or trade secrets or (v) such Participant's gross misconduct. The determination that a termination is for Cause shall be made by the Company in its discretion. Any determination by the Company that the Continuous Service of a Participant was terminated by reason of dismissal without Cause for the purposes of outstanding Stock Awards held by such Participant shall have no impact upon any determination of the rights or obligations of the Company or such Participant for any other purpose.

         (g)    " Change in Control " means the occurrence, in a single transaction or in a series of related transactions, of any one or more of the following events:

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        Notwithstanding the foregoing or any other provision of this Plan, the definition of Change in Control (or any analogous term) in an individual written agreement between the Company or any Affiliate and the Participant shall supersede the foregoing definition with respect to Stock Awards subject to such agreement (it being understood, however, that if no definition of Change in Control or any analogous term is set forth in such an individual written agreement, the foregoing definition shall apply).

         (h)    " Code " means the Internal Revenue Code of 1986, as amended.

         (i)     " Committee " means a committee of one (1) or more members of the Board appointed by the Board in accordance with Section 3(c).

         (j)     " Common Stock " means the common stock of the Company.

         (k)    " Company " means Senomyx, Inc., a Delaware corporation.

         (l)     " Consultant " means any person, including an advisor, who (i) is engaged by the Company or an Affiliate to render consulting or advisory services and is compensated for such services or (ii) is serving as a member of the Board of Directors of an Affiliate and is compensated for such services. However, service solely as a Director, or payment of a fee for such services, shall not cause a Director to be considered a "Consultant" for purposes of the Plan.

         (m)   " Continuous Service " means that the Participant's service with the Company or an Affiliate, whether as an Employee, Director or Consultant, is not interrupted or terminated. A change in the capacity in which the Participant renders service to the Company or an Affiliate as an Employee, Consultant or Director or a change in the entity for which the Participant renders such service, provided that there is no interruption or termination of the Participant's service with the Company or an Affiliate, shall not terminate a Participant's Continuous Service. For example, a change in status from an Employee of the Company to a Consultant of an Affiliate or to a Director shall not constitute an interruption of Continuous Service. The Board or the chief executive officer of the Company, in that party's discretion, may determine whether Continuous Service shall be considered interrupted in the case of any leave of absence approved by that party, including sick leave, military leave or any other personal leave. Notwithstanding the foregoing, a leave of absence shall be treated as Continuous Service for purposes of vesting in a Stock Award only to such extent as may be provided in the Company's leave of absence policy or in the written terms of the Participant's leave of absence.

         (n)    " Corporate Transaction " means the occurrence, in a single transaction or in a series of related transactions, of any one or more of the following events:

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         (o)    " Covered Employee " means the chief executive officer and the four (4) other highest compensated officers of the Company for whom total compensation is required to be reported to stockholders under the Exchange Act, as determined for purposes of Section 162(m) of the Code.

         (p)    " Director " means a member of the Board.

         (q)    " Disability " means the permanent and total disability of a person within the meaning of Section 22(e)(3) of the Code.

         (r)    " Employee " means any person employed by the Company or an Affiliate. However, service solely as a Director, or payment of a fee for such services, shall not cause a Director to be considered an "Employee" for purposes of the Plan.

         (s)    " Entity " means a corporation, partnership or other entity.

         (t)     " Exchange Act " means the Securities Exchange Act of 1934, as amended.

         (u)    " Exchange Act Person " means any natural person, Entity or "group" (within the meaning of Section 13(d) or 14(d) of the Exchange Act), except that "Exchange Act Person" shall not include (i) the Company or any Subsidiary of the Company, (ii) any employee benefit plan of the Company or any Subsidiary of the Company or any trustee or other fiduciary holding securities under an employee benefit plan of the Company or any Subsidiary of the Company, (iii) an underwriter temporarily holding securities pursuant to an offering of such securities, or (iv) an Entity Owned, directly or indirectly, by the stockholders of the Company in substantially the same proportions as their Ownership of stock of the Company.

         (v)    " Fair Market Value " means, as of any date, the value of the Common Stock determined as follows:

         (w)   " Incentive Stock Option " means an Option intended to qualify as an incentive stock option within the meaning of Section 422 of the Code and the regulations promulgated thereunder.

         (x)    " Initial Grant " means an Option granted to a Non-Employee Director who meets the specified criteria pursuant to Section 8(a)(i) or 8(a)(ii).

         (y)    " IPO Date " means the effective date of the initial public offering of the Common Stock.

         (z)    " Non-Employee Director " means, solely for purposes of Section 8, a Director who is not an Employee. For all other purposes under the Plan, "Non-Employee Director" means a Director who either (i) is not a current Employee or Officer of the Company or an Affiliate, does not receive compensation, either directly or indirectly, from the Company or an Affiliate for services rendered as a consultant or in any capacity other than as a Director (except for an amount as to which disclosure would not be required under Item 404(a) of Regulation S-K promulgated pursuant to the Securities Act (" Regulation S-K ")), does not possess an interest in any other transaction for which disclosure would be required under Item 404(a) of Regulation S-K, and is not engaged in a business relationship for which disclosure would be required pursuant to Item 404(b) of Regulation S-K; or (ii) is otherwise considered a "non-employee director" for purposes of Rule 16b-3.

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         (aa)  " Nonstatutory Stock Option " means an Option not intended to qualify as an Incentive Stock Option.

         (bb)  " Officer " means a person who is an officer of the Company within the meaning of Section 16 of the Exchange Act and the rules and regulations promulgated thereunder.

         (cc)  " Option " means an option to purchase shares of Common Stock granted pursuant to the Plan.

         (dd)  " Option Agreement " means a written agreement between the Company and an Optionholder evidencing the terms and conditions of an Option grant. Each Option Agreement shall be subject to the terms and conditions of the Plan.

         (ee)  " Optionholder " means a person to whom an Option is granted pursuant to the Plan or, if applicable, such other person who holds an outstanding Option.

         (ff)   " Other Stock Award " means an award based in whole or in part by reference to the Common Stock which is granted pursuant to the terms and conditions of Section 7(e).

         (gg)  " Other Stock Award Agreement " means a written agreement between the Company and a holder of an Other Stock Award evidencing the terms and conditions of an Other Stock Award grant. Each Other Stock Award Agreement shall be subject to the terms and conditions of the Plan.

         (hh)  " Outside Director " means a Director who either (i) is not a current employee of the Company or an "affiliated corporation" (within the meaning of Treasury Regulations promulgated under Section 162(m) of the Code), is not a former employee of the Company or an "affiliated corporation" who receives compensation for prior services (other than benefits under a tax-qualified retirement plan) during the taxable year, has not been an officer of the Company or an "affiliated corporation", and does not receive remuneration from the Company or an "affiliated corporation," either directly or indirectly, in any capacity other than as a Director or (ii) is otherwise considered an "outside director" for purposes of Section 162(m) of the Code.

         (ii)    " Own," "Owned," "Owner," "Ownership " A person or Entity shall be deemed to "Own," to have "Owned," to be the "Owner" of, or to have acquired "Ownership" of securities if such person or Entity, directly or indirectly, through any contract, arrangement, understanding, relationship or otherwise, has or shares voting power, which includes the power to vote or to direct the voting, with respect to such securities.

         (jj)   " Participant " means a person to whom a Stock Award is granted pursuant to the Plan or, if applicable, such other person who holds an outstanding Stock Award.

         (kk)  " Plan " means this Senomyx, Inc. 2004 Equity Incentive Plan, as amended and restated.

         (ll)    " Rule 16b-3 " means Rule 16b-3 promulgated under the Exchange Act or any successor to Rule 16b-3, as in effect from time to time.

         (mm)  " Securities Act " means the Securities Act of 1933, as amended.

         (nn)  " Stock Appreciation Right " means a right to receive the appreciation of Common Stock that is granted pursuant to the terms and conditions of Section 7(d).

         (oo)  " Stock Appreciation Right Agreement " means a written agreement between the Company and a holder of a Stock Appreciation Right evidencing the terms and conditions of a Stock Appreciation Right grant. Each Stock Appreciation Right Agreement shall be subject to the terms and conditions of the Plan.

         (pp)  " Stock Award " means any right granted under the Plan, including an Option, a Stock Purchase Award, Stock Bonus Award, a Stock Appreciation Right, a Stock Unit Award or any Other Stock Award.

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         (qq)  " Stock Award Agreement " means a written agreement between the Company and a Participant evidencing the terms and conditions of a Stock Award grant. Each Stock Award Agreement shall be subject to the terms and conditions of the Plan.

         (rr)   " Stock Bonus Award " means an award of shares of Common Stock which is granted pursuant to the terms and conditions of Section 7(b).

         (ss)  " Stock Bonus Award Agreement " means a written agreement between the Company and a holder of a Stock Bonus Award evidencing the terms and conditions of a Stock Bonus Award grant. Each Stock Bonus Award Agreement shall be subject to the terms and conditions of the Plan.

         (tt)   " Stock Purchase Award " means an award of shares of Common Stock which is granted pursuant to the terms and conditions of Section 7(a).

         (uu)  " Stock Purchase Award Agreement " means a written agreement between the Company and a holder of a Stock Purchase Award evidencing the terms and conditions of a Stock Purchase Award grant. Each Stock Purchase Award Agreement shall be subject to the terms and conditions of the Plan.

         (vv)  " Stock Unit Award " means a right to receive shares of Common Stock which is granted pursuant to the terms and conditions of Section 7(c).

         (ww)  " Stock Unit Award Agreement " means a written agreement between the Company and a holder of a Stock Unit Award evidencing the terms and conditions of a Stock Unit Award grant. Each Stock Unit Award Agreement shall be subject to the terms and conditions of the Plan.

         (xx)  " Subsidiary " means, with respect to the Company, (i) any corporation of which more than fifty percent (50%) of the outstanding capital stock having ordinary voting power to elect a majority of the board of directors of such corporation (irrespective of whether, at the time, stock of any other class or classes of such corporation shall have or might have voting power by reason of the happening of any contingency) is at the time, directly or indirectly, Owned by the Company, and (ii) any partnership in which the Company has a direct or indirect interest (whether in the form of voting or participation in profits or capital contribution) of more than fifty percent (50%).

         (yy)  " Ten Percent Stockholder " means a person who Owns (or is deemed to Own pursuant to Section 424(d) of the Code) stock possessing more than ten percent (10%) of the total combined voting power of all classes of stock of the Company or of any of its Affiliates.

3.     ADMINISTRATION.

        (a)    Administration by Board.     The Board shall administer the Plan unless and until the Board delegates administration of the Plan to a Committee, as provided in Section 3(c).

        (b)    Powers of Board.     The Board shall have the power, subject to, and within the limitations of, the express provisions of the Plan:

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        (c)    Delegation to Committee.     

        (d)    Delegation to an Officer.     The Board may delegate to one or more Officers of the Company the authority to do one or both of the following (i) designate Officers and Employees of the Company or any of its Subsidiaries to be recipients of Stock Awards and (ii) determine the number of shares of Common Stock to be subject to such Stock Awards granted to such Officers and Employees of the Company; provided, however, that the Board resolutions regarding such delegation shall specify the total number of shares of Common Stock that may be subject to the Stock Awards granted by such Officer and that such Officer may not grant a Stock Award to himself or herself. Notwithstanding anything to

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the contrary in this Section 3(d), the Board may not delegate to an Officer authority to determine the Fair Market Value of the Common Stock pursuant to Section 2(t)(ii) above.

        (e)    Effect of Board's Decision.     All determinations, interpretations and constructions made by the Board in good faith shall not be subject to review by any person and shall be final, binding and conclusive on all persons.

4.     SHARES SUBJECT TO THE PLAN.

        (a)    Share Reserve.     Subject to the provisions of Section 12(a) relating to Capitalization Adjustments, the shares of Common Stock that may be issued pursuant to Stock Awards shall not exceed in the aggregate four million nine hundred sixty-five thousand (4,965,000) shares of Common Stock plus an automatic annual increase to be added on the first day of each Company fiscal year, beginning in 2005 and ending in (and including) 2013, equal to the least of the following amounts: (i) five percent (5%) of the Company's outstanding shares of Common Stock on the day preceding the first day of the applicable Company fiscal year (rounded to the nearest whole share), (ii) one million seven hundred thousand (1,700,000) shares of Common Stock, or (iii) an amount as may be determined by the Board.

        (b)    Reversion of Shares to the Share Reserve.     If any Stock Award shall for any reason expire or otherwise terminate, in whole or in part, without having been exercised in full, or if any shares of Common Stock issued to a Participant pursuant to a Stock Award are forfeited to or repurchased by the Company, including, but not limited to, any repurchase or forfeiture caused by the failure to meet a contingency or condition required for the vesting of such shares, then the shares of Common Stock not issued under such Stock Award, or forfeited to or repurchased by the Company, shall revert to and again become available for issuance under the Plan. If any shares subject to a Stock Award are not delivered to a Participant because such shares are withheld for the payment of taxes or the Stock Award is exercised through a reduction of shares subject to the Stock Award ( i.e. , "net exercised"), the number of shares that are not delivered to the Participant shall remain available for issuance under the Plan. If the exercise price of any Stock Award is satisfied by tendering shares of Common Stock held by the Participant (either by actual delivery or attestation), then the number of shares so tendered shall remain available for issuance under the Plan. For purposes of qualification under Section 422 of the Code, notwithstanding anything to the contrary in this Section 4(b) and subject to the provisions of Section 12(a) relating to Capitalization Adjustments, the aggregate maximum number of shares of Common Stock that may be issued as Incentive Stock Options shall be twenty-five million (25,000,000) shares of Common Stock.

        (c)    Source of Shares.     The shares of Common Stock subject to the Plan may be unissued shares or reacquired shares, bought on the market or otherwise.

5.     ELIGIBILITY.

        (a)    Eligibility for Specific Stock Awards.     Incentive Stock Options may be granted only to Employees. Subject to Sections 1(b) and 8, Stock Awards other than Incentive Stock Options may be granted to Employees, Directors and Consultants.

        (b)    Ten Percent Stockholders.     A Ten Percent Stockholder shall not be granted an Incentive Stock Option unless the exercise price of such Option is at least one hundred ten percent (110%) of the Fair Market Value of the Common Stock on the date of grant and the Option is not exercisable after the expiration of five (5) years from the date of grant.

        (c)    Section 162(m) Limitation on Annual Grants.     Subject to the provisions of Section 12(a) relating to Capitalization Adjustments, at such time as the Company may be subject to the applicable provisions of Section 162(m) of the Code, no Employee shall be eligible to be granted Options or Stock Appreciation Rights covering more than one million (1,000,000) shares of Common Stock during any calendar year.

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        (d)    Consultants.     A Consultant shall not be eligible for the grant of a Stock Award if, at the time of grant, a Form S-8 Registration Statement under the Securities Act (" Form S-8 ") is not available to register either the offer or the sale of the Company's securities to such Consultant because of the nature of the services that the Consultant is providing to the Company, because the Consultant is not a natural person, or because of any other rule governing the use of Form S-8.

6.     OPTION PROVISIONS.

        Subject to Section 8, each Option shall be in such form and shall contain such terms and conditions as the Board shall deem appropriate. All Options shall be separately designated Incentive Stock Options or Nonstatutory Stock Options at the time of grant, and, if certificates are issued, a separate certificate or certificates shall be issued for shares of Common Stock purchased on exercise of each type of Option. The provisions of separate Options need not be identical, but each Option shall include (through incorporation of provisions hereof by reference in the Option or otherwise) the substance of each of the following provisions:

        (a)    Term.     Subject to Section 8, the Board shall determine the term of an Option; provided however that, subject to the provisions of Section 5(b) regarding Ten Percent Stockholders, no Incentive Stock Option shall be exercisable after the expiration of ten (10) years from the date on which it was granted.

        (b)    Exercise Price of an Incentive Stock Option.     Subject to the provisions of Section 5(b) regarding Ten Percent Stockholders, the exercise price of each Incentive Stock Option shall be not less than one hundred percent (100%) of the Fair Market Value of the Common Stock subject to the Option on the date the Option is granted. Notwithstanding the foregoing, an Incentive Stock Option may be granted with an exercise price lower than that set forth in the preceding sentence if such Option is granted pursuant to an assumption or substitution for another option in a manner satisfying the provisions of Section 424(a) of the Code.

        (c)    Exercise Price of a Nonstatutory Stock Option.     Subject to Section 8, the Board, in its discretion, shall determine the exercise price of each Nonstatutory Stock Option.

        (d)    Consideration.     The purchase price of Common Stock acquired pursuant to an Option shall be paid, to the extent permitted by applicable law, either (i) in cash at the time the Option is exercised or (ii) at the discretion of the Board at the time of the grant of the Option (or subsequently in the case of a Nonstatutory Stock Option) (1) by delivery to the Company (either by actual delivery or attestation) of other Common Stock at the time the Option is exercised, (2) by a "net exercise" of the Option (as further described below), (3) pursuant to a program developed under Regulation T as promulgated by the Federal Reserve Board that, prior to the issuance of Common Stock, results in either the receipt of cash (or check) by the Company or the receipt of irrevocable instructions to pay the aggregate exercise price to the Company from the sales proceeds or (4) in any other form of legal consideration that may be acceptable to the Board. Unless otherwise specifically provided in the Option, the purchase price of Common Stock acquired pursuant to an Option that is paid by delivery to the Company of other Common Stock acquired, directly or indirectly from the Company, shall be paid only by shares of the Common Stock of the Company that have been held for more than six (6) months (or such longer or shorter period of time required to avoid a charge to earnings for financial accounting purposes). At any time that the Company is incorporated in Delaware, payment of the Common Stock's "par value," as defined in the Delaware General Corporation Law, shall not be made by deferred payment.

        In the case of a "net exercise" of an Option, the Company will not require a payment of the exercise price of the Option from the Participant but will reduce the number of shares of Common Stock issued upon the exercise by the largest number of whole shares that has a Fair Market Value that does not exceed the aggregate exercise price. With respect to any remaining balance of the aggregate

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exercise price, the Company shall accept a cash payment from the Participant. Shares of Common Stock will no longer be outstanding under an Option (and will therefore not thereafter be exercisable) following the exercise of such Option to the extent of (i) shares used to pay the exercise price of an Option under the "net exercise", (ii) shares actually delivered to the Participant as a result of such exercise and (iii) shares withheld for purposes of tax withholding.

        (e)    Transferability of an Incentive Stock Option.     An Incentive Stock Option shall not be transferable except by will or by the laws of descent and distribution and shall be exercisable during the lifetime of the Optionholder only by the Optionholder. Notwithstanding the foregoing, the Optionholder may, by delivering written notice to the Company, in a form provided by or otherwise satisfactory to the Company, designate a third party who, in the event of the death of the Optionholder, shall thereafter be entitled to exercise the Option.

        (f)    Transferability of a Nonstatutory Stock Option.     A Nonstatutory Stock Option shall be transferable to the extent provided in the Option Agreement. If the Nonstatutory Stock Option does not provide for transferability, then the Nonstatutory Stock Option shall not be transferable except by will or by the laws of descent and distribution and shall be exercisable during the lifetime of the Optionholder only by the Optionholder. Notwithstanding the foregoing, the Optionholder may, by delivering written notice to the Company, in a form provided by or otherwise satisfactory to the Company, designate a third party who, in the event of the death of the Optionholder, shall thereafter be entitled to exercise the Option.

        (g)    Vesting Generally.     The total number of shares of Common Stock subject to an Option may vest and therefore become exercisable in periodic installments that may be equal. The Option may be subject to such other terms and conditions on the time or times when it may be exercised (which may be based on performance or other criteria) as the Board may deem appropriate. The vesting provisions of individual Options may vary. The provisions of this Section 6(g) are subject to the provisions of Section 8 and to any Option provisions governing the minimum number of shares of Common Stock as to which an Option may be exercised.

        (h)    Termination of Continuous Service.     In the event that an Optionholder's Continuous Service terminates (for reasons other than Cause or upon the Optionholder's death or Disability), the Optionholder may exercise his or her Option (to the extent that the Optionholder was entitled to exercise such Option as of the date of termination of Continuous Service) but only within such period of time ending on the earlier of (i) the expiration of the term of the Option as set forth in the Option Agreement or (ii) the date three (3) months following the termination of the Optionholder's Continuous Service (or such longer or shorter period specified in the Option Agreement). If, after termination of Continuous Service, the Optionholder does not exercise his or her Option within the time specified herein or in the Option Agreement (as applicable), the Option shall terminate.

        (i)    Extension of Termination Date.     An Optionholder's Option Agreement may provide that if the exercise of the Option following the termination of the Optionholder's Continuous Service (for reasons other than Cause or upon the Optionholder's death or Disability) would be prohibited at any time solely because the issuance of shares of Common Stock would violate the registration requirements under the Securities Act, then the Option shall terminate on the earlier of (i) the expiration of the term of the Option set forth in the Option Agreement or (ii) the expiration of a period of three (3) months after the termination of the Optionholder's Continuous Service during which the exercise of the Option would not be in violation of such registration requirements.

        (j)    Disability of Optionholder.     In the event that an Optionholder's Continuous Service terminates as a result of the Optionholder's Disability, the Optionholder may exercise his or her Option (to the extent that the Optionholder was entitled to exercise such Option as of the date of termination of Continuous Service), but only within such period of time ending on the earlier of (i) the expiration of the term of the Option as set forth in the Option Agreement or (ii) the date twelve (12) months

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following such termination of Continuous Service (or such longer or shorter period specified in the Option Agreement). If, after termination of Continuous Service, the Optionholder does not exercise his or her Option within the time specified herein or in the Option Agreement (as applicable), the Option shall terminate.

        (k)    Death of Optionholder.     In the event that (i) an Optionholder's Continuous Service terminates as a result of the Optionholder's death or (ii) the Optionholder dies within the period (if any) specified in the Option Agreement after the termination of the Optionholder's Continuous Service for a reason other than death, then the Option may be exercised (to the extent the Optionholder was entitled to exercise such Option as of the date of death) by the Optionholder's estate, by a person who acquired the right to exercise the Option by bequest or inheritance or by a person designated to exercise the option upon the Optionholder's death pursuant to Section 6(e) or 6(f), but only within the period ending on the earlier of (i) the expiration of the term of such Option as set forth in the Option Agreement or (ii) the date eighteen (18) months following the date of death (or such longer or shorter period specified in the Option Agreement). If, after the Optionholder's death, the Option is not exercised within the time specified herein or in the Option Agreement (as applicable), the Option shall terminate.

        (l)    Termination for Cause.     In the event that an Optionholder's Continuous Service is terminated for Cause, the Option shall terminate upon the termination date of such Optionholder's Continuous Service, and the Optionholder shall be prohibited from exercising his or her Option from and after the time of such termination of Continuous Service.

        (m)    Early Exercise.     The Option may include a provision whereby the Optionholder may elect at any time before the Optionholder's Continuous Service terminates to exercise the Option as to any part or all of the shares of Common Stock subject to the Option prior to the full vesting of the Option. Any unvested shares of Common Stock so purchased may be subject to a repurchase option in favor of the Company or to any other restriction the Board determines to be appropriate. The Company shall not be required to exercise its repurchase option until at least six (6) months (or such longer or shorter period of time required to avoid a charge to earnings for financial accounting purposes) have elapsed following exercise of the Option unless the Board otherwise specifically provides in the Option.

7.     PROVISIONS OF STOCK AWARDS OTHER THAN OPTIONS.

        (a)    Stock Purchase Awards.     Each Stock Purchase Award Agreement shall be in such form and shall contain such terms and conditions as the Board shall deem appropriate. At the Board's election, shares of Common Stock may be (i) held in book entry form subject to the Company's instructions until any restrictions relating to the Stock Purchase Award lapse; or (ii) evidenced by a certificate, which certificate shall be held in such form and manner as determined by the Board. The terms and conditions of Stock Purchase Award Agreements may change from time to time, and the terms and conditions of separate Stock Purchase Award Agreements need not be identical, provided, however, that each Stock Purchase Award Agreement shall include (through incorporation of the provisions hereof by reference in the agreement or otherwise) the substance of each of the following provisions:

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        (b)    Stock Bonus Awards.     Each Stock Bonus Award Agreement shall be in such form and shall contain such terms and conditions as the Board shall deem appropriate. At the Board's election, shares of Common Stock may be (i) held in book entry form subject to the Company's instructions until any restrictions relating to the Stock Bonus Award lapse; or (ii) evidenced by a certificate, which certificate shall be held in such form and manner as determined by the Board. The terms and conditions of Stock Bonus Award Agreements may change from time to time, and the terms and conditions of separate Stock Bonus Award Agreements need not be identical, but each Stock Bonus Award Agreement shall include (through incorporation of provisions hereof by reference in the agreement or otherwise) the substance of each of the following provisions:

        (c)    Stock Unit Awards.     Each Stock Unit Award Agreement shall be in such form and shall contain such terms and conditions as the Board shall deem appropriate. The terms and conditions of Stock Unit Award Agreements may change from time to time, and the terms and conditions of

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separate Stock Unit Award Agreements need not be identical, provided, however, that each Stock Unit Award Agreement shall include (through incorporation of the provisions hereof by reference in the agreement or otherwise) the substance of each of the following provisions:

        (d)    Stock Appreciation Rights.     Each Stock Appreciation Right Agreement shall be in such form and shall contain such terms and conditions as the Board shall deem appropriate. The terms and conditions of Stock Appreciation Right Agreements may change from time to time, and the terms and conditions of separate Stock Appreciation Right Agreements need not be identical, provided, however , that each Stock Appreciation Right Agreement shall include (through incorporation of the provisions hereof by reference in the agreement or otherwise) the substance of each of the following provisions:

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        (e)    Other Stock Awards.     Other forms of Stock Awards valued in whole or in part by reference to, or otherwise based on, Common Stock may be granted either alone or in addition to Stock Awards provided for under Section 6 and the preceding provisions of this Section 7. Subject to the provisions of the Plan, the Board shall have sole and complete authority to determine the persons to whom and the time or times at which such Other Stock Awards will be granted, the number of shares of Common Stock (or the cash equivalent thereof) to be granted pursuant to such Other Stock Awards and all other terms and conditions of such Other Stock Awards.

8.     NON-EMPLOYEE DIRECTORS' NONSTATUTORY STOCK OPTION PROGRAM.

        Without any further action by the Board, automatic Option grants shall be made under the Plan in accordance with this Section 8 to Non-Employee Directors who meet the criteria specified in Section 8(a). All Options granted under this Section 8 shall be Nonstatutory Stock Options and shall be in such form as may be approved by the Board, subject to the provisions of the Plan and Section 8.

         (a)     Non-Discretionary Grants.     

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        (b)    Option Provisions.     Each Option granted under this Section 8 shall include (through incorporation by reference in the Option or otherwise) the substance of each of the provisions of Section 6, except that no Option granted under this Section 8 shall be exercisable after the expiration of ten (10) years after the date on which it was granted and the exercise price of each Option granted under this Section 8 shall be one hundred percent (100%) of the Fair Market Value of the Common Stock subject to the Option on the date the Option is granted.

9.     COVENANTS OF THE COMPANY.

         (a)     Availability of Shares.     During the terms of the Stock Awards, the Company shall keep available at all times the number of shares of Common Stock required to satisfy such Stock Awards.

        (b)    Securities Law Compliance.     The Company shall seek to obtain from each regulatory commission or agency having jurisdiction over the Plan such authority as may be required to grant Stock Awards and to issue and sell shares of Common Stock upon exercise of the Stock Awards; provided, however, that this undertaking shall not require the Company to register under the Securities Act the Plan, any Stock Award or any Common Stock issued or issuable pursuant to any such Stock Award. If, after reasonable efforts, the Company is unable to obtain from any such regulatory commission or agency the authority which counsel for the Company deems necessary for the lawful issuance and sale of Common Stock under the Plan, the Company shall be relieved from any liability for failure to issue and sell Common Stock upon exercise of such Stock Awards unless and until such authority is obtained.

10.   USE OF PROCEEDS FROM STOCK.

        Proceeds from the sale of Common Stock pursuant to Stock Awards shall constitute general funds of the Company.

11.   MISCELLANEOUS.

         (a)     Acceleration of Exercisability and Vesting.     The Board shall have the power to accelerate the time at which a Stock Award may first be exercised or the time during which a Stock Award or any part thereof will vest in accordance with the Plan, notwithstanding the provisions in the Stock Award stating the time at which it may first be exercised or the time during which it will vest.

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        (b)    Stockholder Rights.     No Participant shall be deemed to be the holder of, or to have any of the rights of a holder with respect to, any shares of Common Stock subject to such Stock Award unless and until such Participant has satisfied all requirements for exercise of the Stock Award pursuant to its terms.

        (c)    No Employment or other Service Rights.     Nothing in the Plan, any Stock Award Agreement or other instrument executed thereunder or any Stock Award granted pursuant thereto shall confer upon any Participant any right to continue to serve the Company or an Affiliate in the capacity in effect at the time the Stock Award was granted or shall affect the right of the Company or an Affiliate to terminate (i) the employment of an Employee with or without notice and with or without cause, (ii) the service of a Consultant pursuant to the terms of such Consultant's agreement with the Company or an Affiliate or (iii) the service of a Director pursuant to the Bylaws of the Company or an Affiliate, and any applicable provisions of the corporate law of the state in which the Company or the Affiliate is incorporated, as the case may be.

        (d)    Incentive Stock Option $100,000 Limitation.     To the extent that the aggregate Fair Market Value (determined at the time of grant) of Common Stock with respect to which Incentive Stock Options are exercisable for the first time by any Optionholder during any calendar year (under all plans of the Company and its Affiliates) exceeds one hundred thousand dollars ($100,000), the Options or portions thereof that exceed such limit (according to the order in which they were granted) shall be treated as Nonstatutory Stock Options, notwithstanding any contrary provision of the applicable Option Agreement(s).

        (e)    Investment Assurances.     The Company may require a Participant, as a condition of exercising or acquiring Common Stock under any Stock Award, (i) to give written assurances satisfactory to the Company as to the Participant's knowledge and experience in financial and business matters and/or to employ a purchaser representative reasonably satisfactory to the Company who is knowledgeable and experienced in financial and business matters and that he or she is capable of evaluating, alone or together with the purchaser representative, the merits and risks of exercising the Stock Award; and (ii) to give written assurances satisfactory to the Company stating that the Participant is acquiring Common Stock subject to the Stock Award for the Participant's own account and not with any present intention of selling or otherwise distributing the Common Stock. The foregoing requirements, and any assurances given pursuant to such requirements, shall be inoperative if (1) the issuance of the shares of Common Stock upon the exercise or acquisition of Common Stock under the Stock Award has been registered under a then currently effective registration statement under the Securities Act or (2) as to any particular requirement, a determination is made by counsel for the Company that such requirement need not be met in the circumstances under the then applicable securities laws. The Company may, upon advice of counsel to the Company, place legends on stock certificates issued under the Plan as such counsel deems necessary or appropriate in order to comply with applicable securities laws, including, but not limited to, legends restricting the transfer of the Common Stock.

        (f)    Withholding Obligations.     To the extent provided by the terms of a Stock Award Agreement, the Company may in its discretion, satisfy any federal, state or local tax withholding obligation relating to a Stock Award by any of the following means (in addition to the Company's right to withhold from any compensation paid to the Participant by the Company) or by a combination of such means: (i) causing the Participant to tender a cash payment; (ii) withholding shares of Common Stock from the shares of Common Stock issued or otherwise issuable to the Participant in connection with the Stock Award; or (iii) by such other method as may be set forth in the Stock Award Agreement.

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12.   ADJUSTMENTS UPON CHANGES IN STOCK.

         (a)     Capitalization Adjustments.     If any change is made in, or other event occurs with respect to, the Common Stock subject to the Plan or subject to any Stock Award without the receipt of consideration by the Company (through merger, consolidation, reorganization, recapitalization, reincorporation, stock dividend, dividend in property other than cash, stock split, liquidating dividend, combination of shares, exchange of shares, change in corporate structure or other transaction not involving the receipt of consideration by the Company (each a " Capitalization Adjustment "), then (i) the Plan will be appropriately adjusted in the class(es) and maximum number of securities subject to the Plan pursuant to Sections 4(a) and 4(b), the maximum number of securities subject to award to any person pursuant to Section 5(c) and the number of securities subject to the automatic Option grants under Section 8 and (ii) the outstanding Stock Awards will be appropriately adjusted in the class(es) and number of securities and price per share of Common Stock subject to such outstanding Stock Awards. The Board shall make such adjustments, and its determination shall be final, binding and conclusive. (Notwithstanding the foregoing, the conversion of any convertible securities of the Company shall not be treated as a transaction "without receipt of consideration" by the Company.)

        (b)    Dissolution or Liquidation.     In the event of a dissolution or liquidation of the Company, all outstanding Stock Awards (other than Stock Awards consisting of vested Common Stock not subject to the Company's right of repurchase) shall terminate immediately prior to the completion of such dissolution or liquidation, and Common Stock subject to the Company's repurchase option may be repurchased by the Company notwithstanding the fact that the holder of such stock is still in Continuous Service; provided however that, the Board may, in its discretion, cause some or all Stock Awards to be fully vested, exercisable and/or no longer subject to repurchase (to the extent such Stock Awards have not previously expired or terminated) before the dissolution or liquidation is completed but contingent on its completion.

        (c)    Corporate Transaction.     In the event of a Corporate Transaction, any surviving corporation or acquiring corporation may assume or continue any or all Stock Awards outstanding under the Plan or may substitute similar stock awards for Stock Awards outstanding under the Plan (including but not limited to, awards to acquire the same consideration paid to the stockholders of the Company, as the case may be, pursuant to the Corporate Transaction), and any reacquisition or repurchase rights held by the Company in respect of Common Stock issued pursuant to Stock Awards may be assigned by the Company to the successor of the Company (or the successor's parent company), if any, in connection with such Corporate Transaction. In the event that any surviving corporation or acquiring corporation does not assume or continue all such outstanding Stock Awards or substitute similar stock awards for all such outstanding Stock Awards, then with respect to Stock Awards that have been not assumed, continued or substituted and that are held by Participants whose Continuous Service has not terminated prior to the effective time of the Corporate Transaction, the vesting of such Stock Awards (and, if applicable, the time at which such Stock Awards may be exercised) shall (contingent upon the effectiveness of the Corporate Transaction) be accelerated in full to a date prior to the effective time of such Corporate Transaction as the Board shall determine (or, if the Board shall not determine such a date, to the date that is five (5) days prior to the effective time of the Corporate Transaction), and such Stock Awards shall terminate if not exercised (if applicable) at or prior to such effective time and any reacquisition or repurchase rights held by the Company with respect to such Stock Awards shall (contingent upon the effectiveness of the Corporate Transaction) lapse. With respect to any other Stock Awards outstanding under the Plan that have not been assumed, continued or substituted, the vesting of such Stock Awards (and, if applicable, the time at which such Stock Award may be exercised) shall not be accelerated, unless otherwise provided in a written agreement between the Company or any Affiliate and the holder of such Stock Award, and such Stock Awards shall terminate if not exercised (if applicable) prior to the effective time of the Corporate Transaction.

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        (d)    Change in Control.     A Stock Award may be subject to additional acceleration of vesting and exercisability upon or after a Change in Control as may be provided in the Stock Award Agreement for such Stock Award or as may be provided in any other written agreement between the Company or any Affiliate and the Participant, but in the absence of such provision, no such acceleration shall occur.

13.   AMENDMENT OF THE PLAN AND STOCK AWARDS.

         (a)     Amendment of Plan.     Subject to the limitations, if any, of applicable law, the Board at any time, and from time to time, may amend the Plan. However, except as provided in Section 12(a) relating to Capitalization Adjustments, no amendment shall be effective unless approved by the stockholders of the Company to the extent stockholder approval is necessary to satisfy applicable law.

        (b)    Stockholder Approval.     The Board, in its discretion, may submit any other amendment to the Plan for stockholder approval, including, but not limited to, amendments to the Plan intended to satisfy the requirements of Section 162(m) of the Code and the regulations thereunder regarding the exclusion of performance-based compensation from the limit on corporate deductibility of compensation paid to Covered Employees.

        (c)    Contemplated Amendments.     It is expressly contemplated that the Board may amend the Plan in any respect the Board deems necessary or advisable to provide eligible Employees with the maximum benefits provided or to be provided under the provisions of the Code and the regulations promulgated thereunder relating to Incentive Stock Options and/or to bring the Plan and/or Incentive Stock Options granted under it into compliance therewith.

        (d)    No Impairment of Rights.     Rights under any Stock Award granted before amendment of the Plan shall not be impaired by any amendment of the Plan unless (i) the Company requests the consent of the Participant and (ii) the Participant consents in writing.

        (e)    Amendment of Stock Awards.     The Board at any time, and from time to time, may amend the terms of any one or more Stock Awards, including, but not limited to, amendments to provide terms more favorable than previously provided in the agreement evidencing a Stock Award, subject to any specified limits in the Plan that are not subject to Board discretion; provided, however, that the rights under any Stock Award shall not be impaired by any such amendment unless (i) the Company requests the consent of the Participant and (ii) the Participant consents in writing.

14.   TERMINATION OR SUSPENSION OF THE PLAN.

         (a)     Plan Term.     The Board may suspend or terminate the Plan at any time. Unless sooner terminated, the Plan shall terminate on the day before the tenth (10th) anniversary of the date the Plan is adopted by the Board or approved by the stockholders of the Company, whichever is earlier. No Stock Awards may be granted under the Plan while the Plan is suspended or after it is terminated.

        (b)    No Impairment of Rights.     Suspension or termination of the Plan shall not impair rights and obligations under any Stock Award granted while the Plan is in effect except with the written consent of the Participant.

15.   EFFECTIVE DATE OF PLAN.

        The Plan shall become effective on the IPO Date, but no Stock Award shall be exercised (or, in the case of a stock bonus, shall be granted) unless and until the Plan has been approved by the stockholders of the Company, which approval shall be within twelve (12) months before or after the date the Plan is adopted by the Board.

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16.   CHOICE OF LAW.

        The law of the State of California shall govern all questions concerning the construction, validity and interpretation of this Plan, without regard to such state's conflict of laws rules.

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SENOMYX, INC. 2004 EQUITY INCENTIVE PLAN INITIALLY ADOPTED BY THE BOARD OF DIRECTORS ON JANUARY 30, 1999, AND APPROVED BY STOCKHOLDERS ON FEBRUARY 26, 1999, AS THE 1999 EQUITY INCENTIVE PLAN AMENDMENT AND RESTATEMENT ADOPTED BY THE BOARD OF DIRECTORS ON APRIL 30, 2004 AND APPROVED BY STOCKHOLDERS ON JUNE 7, 2004 TERMINATION DATE: APRIL 29, 2014

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Exhibit 10.3


SENOMYX, INC.
2004 EQUITY INCENTIVE PLAN
STOCK OPTION AGREEMENT
(INCENTIVE STOCK OPTION OR NONSTATUTORY STOCK OPTION)

        Pursuant to your Stock Option Grant Notice ( "Grant Notice" ) and this Stock Option Agreement, Senomyx, Inc. (the "Company" ) has granted you an option under its 2004 Equity Incentive Plan (the "Plan" ) to purchase the number of shares of the Company's Common Stock indicated in your Grant Notice at the exercise price indicated in your Grant Notice. Defined terms not explicitly defined in this Stock Option Agreement but defined in the Plan shall have the same definitions as in the Plan.

        The details of your option are as follows:

        1.     VESTING.     Subject to the limitations contained herein, your option will vest as provided in your Grant Notice, provided that vesting will cease upon the termination of your Continuous Service. In addition, if the Company is subject to a Change in Control before your Continuous Service terminates, and within either one (1) month prior to or eighteen (18) months following the effective date of such Change in Control your Continuous Service is involuntarily terminated by the Company without Cause (which shall not include a termination resulting from death or Disability) or you resign for Good Reason, then all of the remaining unvested shares subject to this option will become fully vested and exercisable upon the date of such termination of your Continuous Service.

        For purposes of this Section 1, " Good Reason " means the occurrence of one or more of the following without your express written consent: (i) a change in your position, duties or responsibilities (including reporting responsibilities) that results in a material diminution in your duties; provided, however , that a change in your title or reporting relationship alone shall not provide the basis for a voluntary termination with Good Reason; (ii) a reduction in your annual base compensation or (iii) the Company's requiring you to permanently relocate to any place outside a fifty (50) mile radius of your then current work site.

        2.     NUMBER OF SHARES AND EXERCISE PRICE.     The number of shares of Common Stock subject to your option and your exercise price per share referenced in your Grant Notice may be adjusted from time to time for Capitalization Adjustments.

        3.     METHOD OF PAYMENT.     Payment of the exercise price is due in full upon exercise of all or any part of your option. You may elect to make payment of the exercise price in cash or by check or in any other manner permitted by your Grant Notice, which may include one or more of the following:

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        4.     WHOLE SHARES.     You may exercise your option only for whole shares of Common Stock.

        5.     SECURITIES LAW COMPLIANCE.     Notwithstanding anything to the contrary contained herein, you may not exercise your option unless the shares of Common Stock issuable upon such exercise are then registered under the Securities Act or, if such shares of Common Stock are not then so registered, the Company has determined that such exercise and issuance would be exempt from the registration requirements of the Securities Act. The exercise of your option also must comply with other applicable laws and regulations governing your option, and you may not exercise your option if the Company determines that such exercise would not be in material compliance with such laws and regulations.

        6.     TERM.     You may not exercise your option before the commencement of its term or after its term expires. The term of your option commences on the Date of Grant and expires upon the earliest of the following:

        If your option is an Incentive Stock Option, note that to obtain the federal income tax advantages associated with an Incentive Stock Option, the Code requires that at all times beginning on the date of grant of your option and ending on the day three (3) months before the date of your option's exercise, you must be an employee of the Company or an Affiliate, except in the event of your death or your permanent and total disability, as defined in Section 22(e) of the Code. (The definition of disability in Section 22(e) of the Code is different from the definition of the Disability under the Plan). The Company has provided for extended exercisability of your option under certain circumstances for your benefit but cannot guarantee that your option will necessarily be treated as an Incentive Stock Option if you continue to provide services to the Company or an Affiliate as a Consultant or Director after your employment terminates or if you otherwise exercise your option more than three (3) months after the date your employment with the Company or an Affiliate terminates.

        7.     EXERCISE.     

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        8.     TRANSFERABILITY.     

        9.     OPTION NOT A SERVICE CONTRACT.     Your option is not an employment or service contract, and nothing in your option shall be deemed to create in any way whatsoever any obligation on your part to continue in the employ of the Company or an Affiliate, or of the Company or an Affiliate to continue your employment. In addition, nothing in your option shall obligate the Company or an Affiliate, their respective stockholders, Boards of Directors, Officers or Employees to continue any relationship that you might have as a Director or Consultant for the Company or an Affiliate.

        10.     WITHHOLDING OBLIGATIONS.     

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        The accounting firm engaged by the Company for general audit purposes as of the day prior to the effective date of the Change in Control shall perform the foregoing calculations. If the accounting firm so engaged by the Company is serving as accountant or auditor for the individual, entity or group effecting the Change in Control, the Company shall appoint a nationally recognized accounting firm to make the determinations required hereunder. The Company shall bear all expenses with respect to the determinations by such accounting firm required to be made hereunder.

        The accounting firm engaged to make the determinations hereunder shall provide its calculations, together with detailed supporting documentation, to you and the Company within fifteen (15) calendar days after the date on which your right to a Payment is triggered (if requested at that time by you or the Company) or such other time as requested by you or the Company. If the accounting firm determines that no Excise Tax is payable with respect to a Payment, either before or after the application of the Reduced Amount, it shall furnish you and the Company with an opinion reasonably acceptable to you that no Excise Tax will be imposed with respect to such Payment. Any good faith determinations of the accounting firm made hereunder shall be final, binding and conclusive upon you and the Company.

        11.     NOTICES.     Any notices provided for in your option or the Plan shall be given in writing and shall be deemed effectively given upon receipt or, in the case of notices delivered by mail by the Company to you, five (5) days after deposit in the United States mail, postage prepaid, addressed to you at the last address you provided to the Company.

        12.     GOVERNING PLAN DOCUMENT.     Your option is subject to all the provisions of the Plan, the provisions of which are hereby made a part of your option, and is further subject to all interpretations, amendments, rules and regulations, which may from time to time be promulgated and adopted pursuant to the Plan. In the event of any conflict between the provisions of your option and those of the Plan, the provisions of the Plan shall control.

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SENOMYX, INC.
2004 EQUITY INCENTIVE PLAN

NON-EMPLOYEE DIRECTORS' STOCK OPTION PROGRAM

STOCK OPTION AGREEMENT
(NONSTATUTORY STOCK OPTION)

        Pursuant to your Stock Option Grant Notice ( "Grant Notice" ) and this Stock Option Agreement, Senomyx, Inc. (the "Company" ) has granted you an option under its 2004 Equity Incentive Plan (the "Plan" ) and Non-Employee Directors' Stock Option Program to purchase the number of shares of the Company's Common Stock indicated in your Grant Notice at the exercise price indicated in your Grant Notice. Defined terms not explicitly defined in this Stock Option Agreement but defined in the Plan shall have the same definitions as in the Plan.

        The details of your option are as follows:

        1.     VESTING .    Subject to the limitations contained herein, your option will vest as provided in your Grant Notice, provided that vesting will cease upon the termination of your Continuous Service. In addition, if the Company is subject to a Change in Control before your Continuous Service terminates, then all of the unvested shares subject to this option shall become fully vested and exercisable immediately prior to the effective date of such Change in Control.

        2.     NUMBER OF SHARES AND EXERCISE PRICE .    The number of shares of Common Stock subject to your option and your exercise price per share referenced in your Grant Notice may be adjusted from time to time for Capitalization Adjustments, as provided in the Plan.

        3.     EXERCISE PRIOR TO VESTING ("EARLY EXERCISE").     If permitted in your Grant Notice (i.e., the "Exercise Schedule" indicates that "Early Exercise" of your option is permitted) and subject to the provisions of your option, you may elect at any time that is both (i) during the period of your Continuous Service and (ii) during the term of your option, to exercise all or part of your option, including the nonvested portion of your option; provided, however, that:

        4.     METHOD OF PAYMENT .    Payment of the exercise price is due in full upon exercise of all or any part of your option. You may elect to make payment of the exercise price in cash or by check or in any other manner permitted by your Grant Notice , which may include one or more of the following:

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        5.     WHOLE SHARES .    You may exercise your option only for whole shares of Common Stock.

        6.     SECURITIES LAW COMPLIANCE .    Notwithstanding anything to the contrary contained herein, you may not exercise your option unless the shares of Common Stock issuable upon such exercise are then registered under the Securities Act or, if such shares of Common Stock are not then so registered, the Company has determined that such exercise and issuance would be exempt from the registration requirements of the Securities Act. The exercise of your option must also comply with other applicable laws and regulations governing your option, and you may not exercise your option if the Company determines that such exercise would not be in material compliance with such laws and regulations.

        7.     TERM .    You may not exercise your option before the commencement of its term or after its term expires. The term of your option commences on the Date of Grant and expires upon the earliest of the following:

        8.     EXERCISE.     

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        9.     TRANSFERABILITY .    Your option is not transferable, except (i) by will or by the laws of descent and distribution, (ii) with the prior written approval of the Company, by instrument to an inter vivos or testamentary trust, in a form accepted by the Company, in which the option is to be passed to beneficiaries upon the death of the trustor (settlor) and (iii) with the prior written approval of the Company, by gift, in a form accepted by the Company, to a permitted transferee under Rule 701 of the Securities Act.

        10.     OPTION NOT A SERVICE CONTRACT .    Your option is not an employment or service contract, and nothing in your option shall be deemed to create in any way whatsoever any obligation on your part to continue in the employ of the Company or an Affiliate, or of the Company or an Affiliate to continue your employment. In addition, nothing in your option shall obligate the Company or an Affiliate, their respective shareholders, Boards of Directors, Officers or Employees to continue any relationship that you might have as a Director or Consultant for the Company or an Affiliate.

        11.     WITHHOLDING OBLIGATIONS.     

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        The accounting firm engaged by the Company for general audit purposes as of the day prior to the effective date of the Change in Control shall perform the foregoing calculations. If the accounting firm so engaged by the Company is serving as accountant or auditor for the individual, entity or group effecting the Change in Control, the Company shall appoint a nationally recognized accounting firm to make the determinations required hereunder. The Company shall bear all expenses with respect to the determinations by such accounting firm required to be made hereunder.

        The accounting firm engaged to make the determinations hereunder shall provide its calculations, together with detailed supporting documentation, to you and the Company within fifteen (15) calendar days after the date on which your right to a Payment is triggered (if requested at that time by you or the Company) or such other time as requested by you or the Company. If the accounting firm determines that no Excise Tax is payable with respect to a Payment, either before or after the application of the Reduced Amount, it shall furnish you and the Company with an opinion reasonably acceptable to you that no Excise Tax will be imposed with respect to such Payment. Any good faith determinations of the accounting firm made hereunder shall be final, binding and conclusive upon you and the Company.

        12.     NOTICES .    Any notices provided for in your option or the Plan shall be given in writing and shall be deemed effectively given upon receipt or, in the case of notices delivered by mail by the Company to you, five (5) days after deposit in the United States mail, postage prepaid, addressed to you at the last address you provided to the Company.

        13.     GOVERNING PLAN DOCUMENT .    Your option is subject to all the provisions of the Plan, the provisions of which are hereby made a part of your option, and is further subject to all interpretations, amendments, rules and regulations which may from time to time be promulgated and adopted pursuant to the Plan. In the event of any conflict between the provisions of your option and those of the Plan, the provisions of the Plan shall control.

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SENOMYX, INC. 2004 EQUITY INCENTIVE PLAN STOCK OPTION AGREEMENT (INCENTIVE STOCK OPTION OR NONSTATUTORY STOCK OPTION)
SENOMYX, INC. 2004 EQUITY INCENTIVE PLAN NON-EMPLOYEE DIRECTORS' STOCK OPTION PROGRAM STOCK OPTION AGREEMENT (NONSTATUTORY STOCK OPTION)

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Exhibit 10.4


SENOMYX, INC.

2004 EMPLOYEE STOCK PURCHASE PLAN

ADOPTED BY THE BOARD OF DIRECTORS APRIL 30, 2004
APPROVED BY STOCKHOLDERS JUNE 7, 2004

1.      PURPOSE.

         (a)    The purpose of the Plan is to provide a means by which Employees of the Company and certain designated Related Corporations may be given an opportunity to purchase shares of the Common Stock of the Company.

         (b)    The Company, by means of the Plan, seeks to secure and retain the services of current and new Employees and to provide incentives for such persons to exert maximum efforts for the success of the Company and its Related Corporations.

         (c)    The Company intends that the Purchase Rights be considered options issued under an Employee Stock Purchase Plan.

2.      DEFINITIONS.

        As used in the Plan and any Offering, unless otherwise specified, the following terms have the meanings set forth below:

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3.      ADMINISTRATION.

4.      SHARES OF COMMON STOCK SUBJECT TO THE PLAN.

        Subject to the provisions of Section 14(a) relating to adjustments upon changes in Common Stock, the stock that may be sold pursuant to Purchase Rights granted under the Plan shall not exceed in the aggregate one hundred and forty thousand (140,000) shares of Common Stock, plus an annual increase

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to be added on the first day of each Company fiscal year, beginning in 2005 and ending in (and including) 2013, equal to the least of the following amounts: (i) one percent (1%) of the Company's outstanding shares of Common Stock on the day preceding the first day of the applicable Company fiscal year (rounded to the nearest whole share), (ii) two hundred eighty thousand (280,000) shares of Common Stock, or (iii) an amount determined by the Board.

5.      GRANT OF PURCHASE RIGHTS; OFFERING.

6.      ELIGIBILITY.

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7.      PURCHASE RIGHTS; PURCHASE PRICE.

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8.      PARTICIPATION; WITHDRAWAL; TERMINATION.

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9.      EXERCISE.

10.    COVENANTS OF THE COMPANY.

        The Company shall seek to obtain from each federal, state, foreign or other regulatory commission or agency having jurisdiction over the Plan such authority as may be required to issue and sell shares of Common Stock upon exercise of the Purchase Rights. If, after commercially reasonable efforts, the Company is unable to obtain from any such regulatory commission or agency the authority that counsel for the Company deems necessary for the lawful issuance and sale of shares of Common Stock under the Plan, the Company shall be relieved from any liability for failure to issue and sell shares of Common Stock upon exercise of such Purchase Rights unless and until such authority is obtained.

11.    USE OF PROCEEDS FROM SHARES OF COMMON STOCK.

        Proceeds from the sale of shares of Common Stock pursuant to Purchase Rights shall constitute general funds of the Company.

12.    RIGHTS AS A STOCKHOLDER.

        A Participant shall not be deemed to be the holder of, or to have any of the rights of a holder with respect to, shares of Common Stock subject to Purchase Rights unless and until the Participant's

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shares of Common Stock acquired upon exercise of Purchase Rights are recorded in the books of the Company (or its transfer agent).

13.    DESIGNATION OF BENEFICIARY.

14.    ADJUSTMENTS UPON CHANGES IN SECURITIES; CORPORATE TRANSACTIONS.

15.    AMENDMENT OF THE PLAN.

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16.    TERMINATION OR SUSPENSION OF THE PLAN.

17.    EFFECTIVE DATE OF PLAN.

        The Plan shall become effective on the IPO Date, but no Purchase Rights shall be exercised unless and until the Plan has been approved by the stockholders of the Company within twelve (12) months before or after the date the Plan is adopted by the Board.

18.    MISCELLANEOUS PROVISIONS.

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SENOMYX, INC.

2004 EMPLOYEE STOCK PURCHASE PLAN

OFFERING DOCUMENT

Adopted by the Board of Directors: April 30, 2004

        In this document, capitalized terms not otherwise defined shall have the same definitions as set forth in Senomyx, Inc., 2004 Employee Stock Purchase Plan.

1.     Grant; Offering Date.

         (a)    The Board hereby authorizes a series of Offerings pursuant to the terms of this Offering document.

         (b)    The first Offering hereunder (the "Initial Offering") shall begin on June     , 2004 (the "IPO Date") and shall end on August 30, 2006, unless terminated earlier as provided below. After the Initial Offering, an additional new Offering shall begin on the day after the first Purchase Date of the immediately preceding Offering; provided, however, the first additional new Offering shall begin on September 1, 2004 rather than March 1, 2005. The first day of an Offering is that Offering's "Offering Date." Except as provided below, each Offering shall be approximately twenty-four (24) months in duration, with four (4) Purchase Periods which, except for the first Purchase Period of the Initial Offering (which may be longer or shorter) and except as otherwise provided herein, shall be six (6) months in length. Except as provided below, a Purchase Date is the last day of a Purchase Period or of an Offering, as the case may be. The Initial Offering shall consist of four (4) Purchase Periods with the first Purchase Period of the Initial Offering ending on February 28, 2005.

         (c)    Notwithstanding the foregoing: (i) if any Offering Date falls on a day that is not a Trading Day, then such Offering Date shall instead fall on the next subsequent Trading Day, and (ii) if any Purchase Date falls on a day that is not a Trading Day, then such Purchase Date shall instead fall on the immediately preceding Trading Day.

         (d)    Prior to the commencement of any Offering, the Board may change any or all terms of such Offering and any subsequent Offerings. The granting of Purchase Rights pursuant to each Offering hereunder shall occur on each respective Offering Date unless prior to such date (i) the Board determines that such Offering shall not occur, or (ii) no shares of Common Stock remain available for issuance under the Plan in connection with the Offering.

         (e)    Notwithstanding anything in this Section 1 to the contrary, if on the first day of a Purchase Period during an Offering the Fair Market Value of the shares of Common Stock is less than it was on the Offering Date for that Offering, the Offering that would otherwise have continued in effect shall immediately terminate and the Employees who were enrolled in the terminated Offering shall automatically be enrolled in the new Offering that starts such day. Notwithstanding the foregoing, if on the Offering Date of the Offering that begins on September 1, 2004, the Fair Market Value of the shares of Common Stock is less than it was on the Offering Date for the Initial Offering, the Initial Offering shall immediately terminate and the Employees who were enrolled in such terminated Offering shall automatically be enrolled in the new Offering that starts on September 1, 2004.

         (f)     If the Company's accountants advise the Company that the accounting treatment of purchases under the Plan will change or has changed in a manner that the Company determines is detrimental to its best interests, then the Company may, in its discretion, take any or all of the following actions: (i) terminate each ongoing Offering as of the next Purchase Date (after the purchase of stock on such Purchase Date) under such Offering; (ii) set a new Purchase Date for each ongoing Offering and terminate each such Offering after the purchase of stock on such Purchase Date; (iii) amend the Plan and each ongoing Offering to reduce or eliminate an accounting treatment that is detrimental to the Company's best interests and (iv) terminate each ongoing Offering and refund any money contributed to the Participants.



2.     Eligible Employees.

         (a)    Each Eligible Employee who, on the Offering Date of an Offering hereunder, is (i) an employee of the Company; (ii) an employee of a Subsidiary incorporated in the United States; or (iii) an employee of a Subsidiary that is not incorporated in the United States, provided that the Board or Committee has designated the employees of such Subsidiary as eligible to participate in the Offering, shall be granted a Purchase Right on the Offering Date of such Offering.

         (b)    Notwithstanding the foregoing, the following Employees shall not be Eligible Employees or be granted Purchase Rights under an Offering:

         (c)    Notwithstanding the foregoing, each person who first becomes an Eligible Employee during an ongoing Offering shall not be able to participate in such Offering.

3.     Purchase Rights.

         (a)    Subject to the limitations set forth herein and in the Plan, a Participant's Purchase Right shall permit the purchase of the number of shares of Common Stock purchasable with up to fifteen percent (15%) of such Participant's Earnings paid during the period of such Offering beginning immediately after such Participant first commences participation; provided, however , that no Participant may have more than fifteen percent (15%) of such Participant's Earnings applied to purchase shares of Common Stock under all ongoing Offerings under the Plan and all other plans of the Company and Related Corporations that are intended to qualify as Employee Stock Purchase Plans.

         (b)    For Offerings hereunder, "Earnings" means the base compensation paid to a Participant, including all salary and wages (including amounts elected to be deferred by the Participant, that would otherwise have been paid, under any cash or deferred arrangement or other deferred compensation program established by the Company or a Related Corporation), overtime pay, commissions and bonuses; but excluding all other remuneration paid directly to such Participant, profit sharing, the cost of employee benefits paid for by the Company or a Related Corporation, education or tuition reimbursements, imputed income arising under any Company or Related Corporation group insurance or benefit program, traveling expenses, business and moving expense reimbursements, income received in connection with stock options, contributions made by the Company or a Related Corporation under any employee benefit plan, and similar items of compensation.

         (c)    Notwithstanding the foregoing, the maximum number of shares of Common Stock that a Participant may purchase on any Purchase Date in an Offering shall be such number of shares as has a Fair Market Value (determined as of the Offering Date for such Offering) equal to (x) $25,000 multiplied by the number of calendar years in which the Purchase Right under such Offering has been outstanding at any time, minus (y) the Fair Market Value of any other shares of Common Stock (determined as of the relevant Offering Date with respect to such shares) that, for purposes of the limitation of Section 423(b)(8) of the Code, are attributed to any of such calendar years in which the Purchase Right is outstanding. The amount in clause (y) of the previous sentence shall be determined in accordance with regulations applicable under Section 423(b)(8) of the Code based on (i) the number of shares previously purchased with respect to such calendar years pursuant to such Offering or any

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other Offering under the Plan, or pursuant to any other Company or Related Corporation plans intended to qualify as Employee Stock Purchase Plans, and (ii) the number of shares subject to other Purchase Rights outstanding on the Offering Date for such Offering pursuant to the Plan or any other such Company or Related Corporation Employee Stock Purchase Plan.

         (d)    The maximum aggregate number of shares of Common Stock available to be purchased by all Participants on a Purchase Date shall be the number of shares of Common Stock then remaining available under the Plan. If the aggregate purchase of shares of Common Stock upon exercise of Purchase Rights granted under the Offering would exceed the maximum aggregate number of shares available, the Board shall make a pro rata allocation of the shares available in a uniform and equitable manner.

4.     Purchase Price.

        The purchase price of shares of Common Stock under an Offering shall be the lesser of: (i) eighty-five percent (85%) of the Fair Market Value of such shares of Common Stock on the applicable Offering Date, or (ii) eighty-five percent (85%) of the Fair Market Value of such shares of Common Stock on the applicable Purchase Date, in each case rounded up to the nearest whole cent per share. For the Initial Offering, the Fair Market Value of the shares of Common Stock at the time when the Offering commences shall be the price per share at which shares are first sold to the public in the Company's initial public offering as specified in the final prospectus for that initial public offering.

5.     Participation.

         (a)    An Eligible Employee may elect to participate in an Offering on the Offering Date. An Eligible Employee shall elect his or her payroll deduction percentage on such enrollment form as the Company provides. The completed enrollment form must be delivered to the Company prior to the date participation is to be effective, unless a later time for filing the enrollment form is set by the Company for all Eligible Employees with respect to a given Offering. Payroll deduction percentages must be expressed in whole percentages of Earnings, with a minimum percentage of one percent (1%) and a maximum percentage of fifteen percent (15%). Except as provided in paragraph (e) below with respect to the Initial Offering, Contributions may be made only by way of payroll deductions.

         (b)    A Participant may increase or decrease his or her participation level once during a Purchase Period. In addition, a Participant may decrease to zero percent (0%) his or her participation level only once during a Purchase Period. Any such increase or decrease in participation level shall be made by delivering a notice to the Company or a designated Subsidiary in such form as the Company provides prior to the ten (10) day period (or such shorter period of time as determined by the Company and communicated to Participants) immediately preceding the next Purchase Date of the Purchase Period for which it is to be effective.

         (c)    A Participant may withdraw from an Offering and receive a refund of his or her Contributions (reduced to the extent, if any, such Contributions have been used to acquire shares of Common Stock for the Participant on any prior Purchase Date) without interest, at any time prior to the end of the Offering, excluding only each ten (10) day period immediately preceding a Purchase Date (or such shorter period of time determined by the Company and communicated to Participants), by delivering a withdrawal notice to the Company or a designated Subsidiary in such form as the Company provides. A Participant who has withdrawn from an Offering shall not again participate in such Offering, but may participate in subsequent Offerings under the Plan in accordance with the terms of the Plan and the terms of such subsequent Offerings.

         (d)    Notwithstanding the foregoing or any other provision of this Offering document or of the Plan to the contrary, neither the enrollment of any Eligible Employee in the Plan nor any forms relating to

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participation in the Plan shall be given effect until such time as a registration statement covering the registration of the shares under the Plan that are subject to the Offering has been filed by the Company and has become effective.

         (e)    Notwithstanding the foregoing or any other provision of this Offering document or of the Plan to the contrary, with respect to the Initial Offering only, each Eligible Employee who is employed on the IPO Date automatically shall be enrolled in the Initial Offering, with a Purchase Right to purchase up to the number of shares of Common Stock that are purchasable with fifteen percent (15%) of the Eligible Employee's Earnings, subject to the limitations set forth in Section 3 above. Following the filing of an effective registration statement pursuant to a Form S-8, such Eligible Employee shall be provided a certain period of time, as determined by the Company in its sole discretion, within which to elect to authorize payroll deductions for the purchase of shares during the Initial Offering (which may be for a percentage that is less than fifteen percent (15%) of the Eligible Employee's Earnings). If such Eligible Employee elects not to authorize such payroll deductions, the Eligible Employee instead may purchase shares of Common Stock under the Plan by delivering a single cash payment for the purchase of such shares to the Company or a designated Subsidiary prior to the ten (10) day period (or such shorter period of time as determined by the Company and communicated to Participants) immediately preceding the first Purchase Date under the Initial Offering. If an Eligible Employee neither elects to authorize payroll deductions (or fails to do so in a timely manner) nor chooses to make a cash payment in accordance with the foregoing sentence, then the Eligible Employee shall not purchase any shares of Common Stock during the Initial Offering. After the end of the Initial Offering, in order to participate in any subsequent Offerings, an Eligible Employee must enroll and authorize payroll deductions prior to the commencement of the Offering, in accordance with paragraph (a) above; provided, however, that once an Eligible Employee enrolls in an Offering and authorizes payroll deductions (including in connection with the Initial Offering), the Eligible Employee automatically shall be enrolled for all subsequent Offerings until he or she elects to withdraw from an Offering pursuant to paragraph (c) above or terminates his or her participation in the Plan.

6.     Purchases.

        Subject to the limitations contained herein, on each Purchase Date, each Participant's Contributions (without any increase for interest) shall be applied to the purchase of whole shares, up to the maximum number of shares permitted under the Plan and the Offering.

7.     Notices and Agreements.

        Any notices or agreements provided for in an Offering or the Plan shall be given in writing, in a form provided by the Company, and unless specifically provided for in the Plan or this Offering, shall be deemed effectively given upon receipt or, in the case of notices and agreements delivered by the Company, five (5) days after deposit in the United States mail, postage prepaid.

8.     Exercise Contingent on Stockholder Approval.

        The Purchase Rights granted under an Offering are subject to the approval of the Plan by the stockholders of the Company as required for the Plan to obtain treatment as an Employee Stock Purchase Plan.

9.     Offering Subject to Plan.

        Each Offering is subject to all the provisions of the Plan, and the provisions of the Plan are hereby made a part of the Offering. The Offering is further subject to all interpretations, amendments, rules and regulations which may from time to time be promulgated and adopted pursuant to the Plan. In the event of any conflict between the provisions of an Offering and those of the Plan (including interpretations, amendments, rules and regulations which may from time to time be promulgated and adopted pursuant to the Plan), the provisions of the Plan shall control.

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SENOMYX, INC. 2004 EMPLOYEE STOCK PURCHASE PLAN ADOPTED BY THE BOARD OF DIRECTORS APRIL 30, 2004 APPROVED BY STOCKHOLDERS JUNE 7, 2004
SENOMYX, INC. 2004 EMPLOYEE STOCK PURCHASE PLAN OFFERING DOCUMENT

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Exhibit 10.11

         ***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.


Exclusive License and Bailment Agreement

between

The Regents of the University of California

and

Ambryx Inc.

for

"Nucleic Acids Encoding Proteins Used in Assays for
Identifying Taste Modulators"

UC Case Nos. 1998-122,1998-306,1999-0151
1999-029,11999-168, 1999-203, 1999-204, and 2000-045


Table of Contents

Article No.

  Title
  Page
Recitals   1
1.   Definitions   2
2.   Grant   6
3.   Issue Fee   8
4.   Royalties   9
5.   Due Diligence   11
6.   Progress and Royalty Reports   12
7.   Books and Records   13
8.   Life of the Agreement   13
9.   Termination by the Regents   13
10.   Termination by the Licensee   14
11.   Disposition of Products and Biological Materials on Hand Upon Termination   14
12.   Supply of the Biological Material   14
13.   Maintenance of the Biological Material   14
14.   Use of Names and Trademarks   15
15.   Limited Warranty   15
16.   Patent Prosecution and Maintenance   16
17.   Patent Marking   17
18.   Patent Infringement   17
19.   Indemnification   18
20.   Notices   19
21.   Assignability   19
22.   Late Payments   19
23.   Waiver   20
24.   Failure to Perform   20
25.   Governing Laws   20
26.   Government Approval or Registration   20
27.   Export Control Laws   20
28.   Force Majeure   20
29.   Confidentiality   20
30.   Miscellaneous   21
APPENDIX A—PAGE 1A   23
APPENDIX A—PAGE 2A   24
APPENDIX A—PAGE 3A   25
APPENDIX B—PAGE 1B   26
APPENDIX C—PAGE 1C   28
Exhibit A    

UC Case Nos. 1998-122, 1998-306, 1999-015, 1999-029, 1999-168, 1999-203, 1999-204, and 2000-045.

Print date: March 10, 2000

Exclusive License and Bailment Agreement
for
Nucleic Acids Encoding Proteins Used in Assays for Identifying Taste Modulators

        This license agreement (Agreement) is effective this 10 th day of March , 2000 by and between The Regents of the University of California (The Regents), a California corporation, having its statewide administrative offices at 1111 Franklin Street, 12th floor, Oakland, CA 94607-5200, and Ambryx Inc. (Licensee), a Delaware corporation, having a principal place of business at 11099 North Torrey Pines Road Suite 160, La Jolla, CA 92037, herein referred to collectively as the parties (Parties).

Recitals

        Whereas, certain inventions generally characterized as "Nucleic Acids Encoding Proteins Used In Assays for Identifying Taste Modulators," that may be useful for detecting molecules or compounds that effect taste (Invention), were made at the University of California, San Diego by Drs. Charles S. Zuker, Juergen Lindemeier, and John E. Adler (Principal Investigators), and at the National Institutes of Health (NIH) by Drs. Mark Hoon and Nick Ryba and are claimed in Patent Rights defined below;

        Whereas, the Licensee and The Regents entered into a Secrecy Agreement (Secrecy Agreement), having U.C. Agreement Control No 1999-20-0167, effective October 1, 1998, for the purpose of evaluating the Invention;

        Whereas, the Licensee and The Regents entered into a letter agreement (Letter Agreement), having U.C. Agreement Control No. 1999-30-0464, effective April 9, 1999, for the purpose of entering into good-faith negotiations for a license to the Invention in accordance with the terms of the Letter Agreement;

        Whereas, because the Invention was developed under funding provided in part by NIH and in part by the Howard Hughes Medical Institute (HHMI), this Agreement, and any licenses covering such Invention, are subject to overriding obligations to the federal government and HHMI;

        Whereas, under 35 U.S.C. §§ 200-212, The Regents may elect to retain title to any invention made by it under U.S. government funding;

        Whereas, if The Regents elects to retain title to such an invention, then The Regents is required by law to grant to the United States Government a nontransferable, paid up, nonexclusive, irrevocable license to use the invention by or on behalf of the United States Government throughout the world;

        Whereas, in accordance with 35 U.S.C. §§ 200-212,'The Regents elected to retain title to the Invention and granted the required licenses to the United States Government on the following dates: November 13, 1998, (UC Case Nos. 1998-122, 1998-306, 1999-015 and 1999-029); February 5, 1999, (UC Case No. 1999-168); July 7, 1999, (UC Case No. 1999-203); September 13, 1999, (UC Case No. 1999-204) and December 28, 1999 (UC Case No. 2000-045);

        Whereas, patent applications claiming the Invention have been filed by the Principal Investigators who, in accordance with their employment agreements, have assigned their rights in the patent applications to The Regents and HHMI;

        Whereas, The Regents has acquired the right to grant this license from HHMI under the terms of the interinstitutional agreement (HHMI Interinstitutional Agreement), having UC Control No. 86-18-0017, which is incorporated herein by reference;

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        Whereas, The Regents is required under the terms of the HHMI Interinstitutional Agreement to grant to the HHMI a paid-up, non-exclusive, irrevocable license to use the Invention for non-commercial purposes, without any right to sublicense others;

        Whereas, Mark Hoon and Nick Ryba are employed at NIH, and in accordance with their patent agreement with NIH, have assigned to NIH their interest in any patent rights covering inventions made during the course of their employment with NIH;

        Whereas, under the terms of an interinstitutional agreement (NIH Interinstitutional Agreement), having UC Control No.                        , between NIH and The Regents, The Regents is granted the exclusive right to negotiate, execute, and administer on behalf of both parties any resulting license agreements to patent applications and patents jointly owned by The Regents and NIH and contained in Patent Rights I, and Patent Rights II appended hereto as Exhibit "A" and incorporated herein;

        Whereas, due to the Parties' inability to appropriately value the Biological Products and Covered Products with respect to the value of any product identified therewith, the Parties agree that for their convenience, a royalty should be paid to The Regents on Identified Products and Service Products;

        Whereas, the Licensee is a "small entity" as defined in 37 CFR §1.9 and a "small-business concern" defined in 15 U.S.C. §632;

        Whereas, both Parties recognize that the royalties due under this Agreement will be paid on pending patent applications and issued patents;

        Whereas certain Biological Materials, defined below, relating to the Invention were made during the course of research by the Principal Investigator;

        Whereas, it is the intent of the Parties to this Agreement to create a bailment, among other things, for the Biological Materials defined below;

        Whereas, Licensee has requested rights to practice the Invention and use the Biological Materials in order to develop and commercialize products;

        Whereas, The Regents has responded to Licensee's request by granting the following rights to the Licensee so that the products and other benefits derived from the Invention can be enjoyed by the general public.


The Parties agree as follows:

1.     Definitions

        As used in this Agreement, the following terms will have the meaning set forth below:

        1.1     "Property Rights" means all the personal proprietary rights of The Regents covering the tangible personal property in the Biological Materials;

        1.2     "Biological material" means the following biological materials using nomenclature of the Principal Investigator:

        1.3     "Biological Product" means: (a) any product containing a biological substance (e.g., nucleic acids, amino acids, carbohydrates, or lipids) that is comprised of or derived from the Biological Material, including, but not limited to, the following: a taste receptor, plasmid, CDNA clone, gene, promoter, protein, peptide, antibody, glycoprotein, hormone, or fragments and any sequences thereof, or (b) any product produced or encoded by the Biological Materials; or (c) any product substantially similar or identical to a compound in (a) or (b) that is produced by chemical synthesis or by any other

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method where such product could not have been produced but for the use of the Biological Materials. Biological Products may either be a Covered Product or Non-Patent Product.

        1.4     "Patent Rights I" means all U.S. patents and patent applications and foreign patents and patent applications assigned to The Regents, and in the case of foreign patents and patent applications, those existing as of the effective date of this Agreement and those requested under Article 16.3 herein, including any reissues, extensions, substitutions, continuations, divisions, and continuations-in-part applications (only to the extent, however, that claims in the continuations-in-part applications are supported in the specification of the parent patent application) based on any subject matter claimed in the following:

        1.5     "Patent Rights II" means all U.S. patents and patent applications and foreign patents and potent applications assigned to The Regents, and in the case of foreign patents and patent applications, those existing as of the effective date of this Agreement and those requested under Article 16.3 herein, including any reissues, extensions, substitutions, continuations, divisions, and continuations-in-part applications (only to the extent, however, that claims in the continuations-in-part applications are supported in the specification of the parent patent application) based on any subject matter claimed in the following:

        1.6     "Patent Rights III" means all U.S. patents and patent applications and foreign patents and patent applications assigned to The Regents, and in the case of foreign patents and patent applications, those existing as of the effective date of this Agreement and those requested under Article 16.3 herein, including any reissues, extensions, substitutions, continuations, divisions, and continuations-in-part applications (only to the extent, however, that claims in the continuations-in-part applications are supported in the specification of the parent patent application) based on any subject matter claimed in the following:

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        1.7     "Patent Rights" means Patent Rights I, Patent Rights II, and Patent Rights III.

        1.8     "Patent Method" means any process or method claimed in Patent Rights, the use of which, in a particular country, would infringe, but for the license granted to the Licensee, an unexpired claim of a patent or pending claim of a patent application were said claim issued in a patent under Patent Rights in that country.

        1.9     "Covered Products" means:

to the extent that the manufacture, use, or sale of such kit, composition of matter, material, product, or Biological Product, in a particular country, would be covered by or infringe, but for the license granted to Licensee, an unexpired claim of a patent or pending claim of a patent application were said claim issued in a patent under Patent Rights in that country.

        1.10     "Services" means a service provided by the Licensee, its Affiliates, Joint Ventures, or sublicensees to a third party when such service requires the making or using of the Biological Product, Covered Product or the practicing of the Patent Rights.

        1.11     "Non-Patent Products" means any kit, composition of matter, material, product, comprising a Biological Product to the extent that the manufacture, use, or sale of which, in a particular country, does not infringe an unexpired claim of a patent or pending claim of a patent application under Patent Rights.

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        1.12     "Identified Product" means any kit, product, compound, biological agent, or other material the manufacture, use or sale of which is not covered by Patent Rights and does not comprise a Biological Product, but which is an agonist, an antagonist, or an inverse agonist that is identified through the use of the Biological Product, Covered Product or the practice of the Patent Rights and sold by Licensee, its Affiliates, Joint Ventures, or sublicensees.

        1.13     "Service Product" means any kit, product, compound, biological agent or other material, made, used, or sold by a third party, which is not covered by Patent Rights and does not comprise a Biological Product, but which is an agonist, an antagonist, or an inverse agonist that is identified by the Licensee, its Affiliates, Joint Ventures, or sublicensees through the use of Services provided to the third party by Licensee, its Affiliates, Joint Ventures, or sublicensees.

        1.14     "Products" means Covered Products, Non-Patent Products, Identified Products, and Services.

        1.15     "Service Revenues" means the total amount of gross consideration collected from the sale of Services (1) less the cost of raw materials, labor, direct and indirect cost (where such indirect and direct costs do not exceed 125% of the cost for raw materials and labor) or (2) the standard cost of Services as calculated in accordance with generally acceptable accounting methods uniformly applied in all circumstances and approved in writing by The Regents, provided, however, that such costs specified under (1) or (2) above have not already been deducted from Research Funding. Service Revenues does not include any consideration that Licensee receives for Research Funding, reimbursement of patent filing, patent prosecution, patent maintenance, royalties on Identified Products, royalties on Covered Products, royalties on Profits, Sublicense Fees, or other expenses (as agreed upon in writing by the Parties). [***] Moreover, if a Service is provided that combines biologically or chemically active components provided by third parties, then Licensee will be entitled to reduce the Profits paid to The Regents by adjusting the Service Revenues on which the Profits are based. In such event, the Service Revenues will be adjusted by the fraction (A/A+B) where A is the number of biologically or chemically active components contained in Services covered by Patent Rights or the use of the Biological Products and B is the number of biologically or chemically active components provided by the third party or Licensee that are not either Biological Products or covered by Patent Rights.

        1.16     "Affiliate" of the Licensee means any entity which, directly or indirectly, controls the License, is controlled by the Licensee, or is under common control with the Licensee. For these purposes, "control" is defined as one person or entity having: the ownership or control of at least fifty percent (50%) of the voting stock of the other person or entity, or a lesser percentage of the voting stock if such a percentage is the maximum allowed to be owned by a foreign entity in a particular jurisdiction.

        1.17     "Joint Venture" means any separate entity established by an agreement between one or more third parties and Licensee, in which the separate entity manufactures, uses, purchases, sells, or acquires Products from the Licensee.

        1.18     "Net Sales" means the gross invoice prices from the sale of Products by the Licensee, its sublicensee, Affiliate, or Joint Venture to one or more third parties for cash or other form of consideration in accordance with generally accepted accounting principles, less only the following deductions (if not already deducted from the gross invoice price and at rates customary within the industry): (a) allowances (actually paid and limited to rejections, returns, prompt payment discounts and volume discounts granted to customers of Products, whether in cash or Products in lieu of cash); (b) freight, transport packing, insurance charges and postage associated with transportation; and (c) taxes, tariff, or import/export duties based on sales when included in gross sales, but not value-added taxes or taxes assessed on income derived from such sales.

        1.19     "Proprietary Information" will have the meaning set forth in Paragraph 29.1.

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        1.20     "Research Funding" means the total payments received by Licensee, its Affiliates, Joint Ventures, or sublicensees from a third party for the conduct of scientific research, other than scientific research targeted to the identification of Products or Service Products or a third party, under which the Biological Product is used or the Patent Rights are practiced. Any consideration received by Licensee, its Affiliates, Joint Ventures, or sublicensees for the conduct of scientific research that does not use the Biological Product or is not covered by the Patent Rights is outside the scope of this Agreement, and The Regents is not entitled to share in such consideration.

        1.21     "Profits" means the sum total of Service Revenue and royalties on Service Products.

2.     Grant

        2.1     Subject to the limitations set forth in this Agreement and subject to the licenses granted to the United States Government and HHMI as set forth in the Recitals above, The Regents hereby grants to Licensee exclusive licenses under Patent Rights in countries where Patent Rights exist for the following: (i) to make, have made, use, sell, offer for sale, have sold, export, and import the Covered Products; (ii) to provide Services to one or more third parties; and (iii) to identify Identified Products and Service Products. For the avoidance of doubt, for so long as The Regents has granted to Licensees the above rights and licenses set forth in this Paragraph 2.1, Licensee, its Affiliates, Joint Ventures, and sublicensees have the right to sell Identified Products, and their third-party customers of Services have the right to sell Service Products independent of The Regents.

        2.2     Subject to the limitations set forth in this Agreement and subject to the licenses granted to the United States Government and HHMI as set forth in the Recitals above, The Regents hereby grants to Licensee exclusive licenses under Property Rights in countries where Property Rights may be lawfully granted for the following: (i) to possess, make (propagate), have made, and use the Biological Materials; (ii) to make, have made, use, sell, offer for sale, have sold, export, and import the Non-Patent Products; (iii) to provide Services to one or more third parties; and (iv) to identify Identified Products and Service Products. For the avoidance of doubt, for so long as The Regents has granted to Licensee the above rights and licenses set forth in this Paragraph 2.2, Licensee, its Affiliates, Joint Ventures, and sublicensees have the right to sell Identified Products, their third-party customers of Services have the right to sell Service Products independent of The Regents.

        2.3     The rights granted to Licensee under Paragraphs 2.1 and 2.2 above are limited to the right to possess, make (propagate), have made, and use the Biological Materials only for the purposes stated in this Agreement and for no other purposes. Licensee acknowledges that title to the tangible material comprising the Biological Materials is owned by The Regents and is not transferred to Licensee under this Agreement except as necessary to permit the sale of Products that is comprised of the Biological Material (e.g. Biological Product). Licensee will not sell, donate, abandon, or otherwise transfer the Biological Materials to any third party other than an Affiliate, Joint Venture, or, sublicensee.

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        2.4     For any licenses granted to Licensee under Paragraphs 2.1 and 2.2 above, The Regents also grants to Licensee the right to issue sublicenses to one or more third parties to make, have made, use, sell, offer for sale, have sold, export, and import Products and practice the Patent Method, provided that Licensee retains exclusive rights thereto under this Agreement. To the extent that rights are granted to sublicensees under specific terms and covenants, such terms and covenants will provide for the rights and obligations due The Regents, HHMI, and United States Government, including royalties sufficient to provide for payment to The Regents by Licensee at the rates and bases set forth in Article 4 (Royalties) and Sublicense Fees, if any, as set forth in Paragraph 3.2. For each sublicense granted by Licensee, the Licensee will:

        2.5     Licensee may, at its sole discretion, reduce the exclusive licenses granted under Paragraphs 2.1 and 2.2 to non-exclusive licenses, and subject to Paragraph 2.6, all sublicenses granted by Licensee must be assigned to The Regents.

        2.6     Upon the earlier to occur, termination of this Agreement or when licenses granted to License under Paragraphs 2.1 and 2.2 are reduced from exclusive to nonexclusive licenses, Licensee will assign to The Regents any sublicenses issued by Licensee, except that The Regents will not assume any obligations of the sublicense that extend beyond the duties and obligations of The Regents that are contained in this Agreement. If this Agreement is terminated and Licensee has issued any contracts to a third party under which Licensee receives a royalty based on a Service Product, then the third party will pay directly to The Regents its share of the royalty based on Profits as set forth in Paragraph 4.1 below.

        2.7     The licenses granted hereunder will be subject to the overriding obligations of the U.S. Government, including those set forth in 35 U.S.C. 200-212 and applicable governmental implementing regulations.

        2.8     The manufacture of Covered Products and the practice of the Patent Method will be subject to applicable government importation laws and regulations of a particular country when Covered Products are made outside the particular country in which such Covered Products are used or sold.

        2.9     Nothing in this Agreement will limit the right of The Regents, the U.S. government, and HHMI to do any of the following: (1) publish any and all technical data resulting from any search performed by The Regents, the U.S. government, and HHMI relating to the Invention, to the extent that such results do not contain Licensee's Proprietary Information; or (2) make and use the Invention, Biological Materials, Biological Products, Covered Products, Patent Method, and associated technology and allow other educational and non-profit institutions to do so only for educational and noncommercial research purposes.

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3.     Issue Fee

        3.1     As partial consideration for all the rights and licenses granted to the Licensee, the Licensee will pay to The Regents a license issue fee of [***] to be paid according to the following schedule:

        3.2     Beginning [***] and for each year thereafter through the year [***] , Licensee will pay to The Regents an annual maintenance fee of [***] . This license maintenance fee will be paid to The Regents on or before February 28 of each such year.

        3.3     For each sublicense granted by Licensee to an Affiliate, Joint Venture, or sublicensee to make and use the Biological Materials, Biological Products, or Covered Products or the practice of Patent Rights, Licensee will pay to The Regents [***] of all consideration due under each sublicense agreement, which will include the Premium as defined below, (Sublicense Fee). The Sublicense Fee does not include any consideration received by Licensee for Research Funding, investments in equity or debt financing, excluding the Premium, royalties on Identified Products, royalties on Covered Products and Profits, minimum annual royalties, and reimbursement of patent costs, as specified in this Agreement. Licensee will pay each Sublicense Fee to The Regent quarterly on or before the dates set forth in Paragraph 4.3 below for Sublicense Fees received in the prior calendar quarter.

        3.4     If Licensee desires to accept from a third party [***] , then the Licensee and The Regents will cooperate with each other in determining the portion of the [***] and in determining the fair market value of that [***] . If the Licensee and The Regents are not able to agree upon the fair market value of the [***] , then the Parties will choose a mutually acceptable third party to determine the fair market value of [***] .

        3.5     If a Sublicense Fee is collected that combines biologically or chemically active components comprising either Biological Products or that are covered by Patent Rights (The Regents' Products) and biologically or chemically active components provided by third parties, then Licensee will be entitled to reduce the portion of the Sublicense Fee paid to The Regents by adjusting the total amount of the Sublicense Fees on which The Regents' portion is based. In such event, the total amount of the Sublicense Fees will be adjusted by the fraction (A/A+B) where A comprises The Regents' Products and B is the number, of biologically or chemically active components provided by Licensee or third parties that do not either comprise the Biological Products or covered by Patent Rights.

        3.6     The fees set forth in Paragraphs 3.1, 3.2 and 3.3 above will not be refunded, credited, or considered an advance against royalties, fees, or reimbursements for patent costs due and owing to The Regents under this Agreement.

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4.     Royalties

        4.1     As further consideration for all the rights and licenses granted to the Licensee, its Affiliates, Joint Ventures and sublicensees will pay to The Regents a royalty according to the following:

        In the event that Licensee is unable to negotiate a royalty based on the sales of Service Products due to payments already received by Licensee for the sale of Services, then no royalty will be due to The Regents.

        4.2     If a Product is combined and sold in the form of a multi-component product containing ingredients, which ingredients, themselves, are not Products, then Licensee will be entitled to reduce the royalties paid to The Regents by adjusting the Net Sales on which the royalties are based. In such event, the Net Sales base will be adjusted to be the greater of the amounts calculated using Methods A, B or C below, as follows:

        4.3     Royalties will accrue in each country for the duration of Patent Rights in that country and will be payable to The Regents when: (1) the Profits are received by the Licensee on Service Products, and (2) Products are invoiced, or if not invoiced, when the Products are delivered to a third party or to the Licensee, Affiliate, Joint Venture, or sublicensee for end use.

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        4.4     Royalties and Sublicense Fees accruing to The Regents will be paid to The Regents quarterly on or before the following dates for the royalties and Sublicensing Fees received in the prior calendar quarter:

        4.5     Each such payment will be for royalties and Sublicense Fees that have accrued up to Licensee's most recently completed quarter.

        4.6     Beginning in the year 2014, the Licensee will pay to The Regents a minimum annual royalty in the amounts and at the times set forth below:

Year

  Amount
2014   [***]

2015

 

[***]

2016

 

[***]

2017

 

[***]

2018

 

[***]

        4.7     In each succeeding calendar year after the year 2018, the Licensee will pay a minimum annual royalty of [***] and thereafter for the life of this Agreement. This minimum annual royalty will be paid to The Regents by February 28 of each year and will be credited against any royalties due and owing for the calendar year in which the minimum payment was made

        4.8     If the licenses granted to Licensee under Paragraphs 2.1 and 2.2 are reduced from exclusive to non-exclusive licenses, and The Regents grants the same rights under a non-exclusive license to any third party at more favorable financial terms than specified in Articles 3 (issue Fees) and 4 (Royalties), then The Regents will notify the Licensee in writing of the financial terms contained in the other license agreement. Licensee will have [***] days from the effective date of The Regents' written notice to elect to amend this Agreement. Licensee may elect to amend this Agreement, upon written notice to The Regents, by replacing in whole, but not in part, the financial terms of this Agreement with the financial terms of the other license agreement.

        4.9     In the event reproducible data shows that functional expression of human T1R1, T1R2 or an member of the T2R receptor family can be used in a format suitable for identifying taste modulators consisting of a sweet or salt antagonist, inverse agonist, or agonist, then the Parties will negotiate in good faith to raise the minimum annual royalties to account for additional amounts to be paid to The Regents for the increased value provided to Licensee for the use of receptors in identifying the additional taste modulators.

        4.10     All consideration due The Regents will be payable in United States currency collectible at par in San Francisco, California. When Products are sold or Sublicense Fees are paid for consideration other than United States currency, the royalties and Sublicense Fees will first be determined in the foreign currency of the country in which such Products were sold and Sublicense Fees were received and then converted into equivalent United States currency. The exchange rate will be the rate that is quoted in the Wall Street Journal on the last business day of the reporting period.

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        4.11     Royalties on sales of Products and Sublicense Fees received in any country outside the United States will not be reduced by any taxes, fees, or other charges imposed by the government of such country except those taxes, fees, and charges allowed under the provisions of Paragraph 1.18 (Net Sales). [***]

        4.12     Notwithstanding the provisions of Article 28 (Force Majeure) below, if at any time Licensee is prevented from promptly paying part or all of the royalties or Sublicense Fees owed to The Regents because of legal restrictions encountered by Licensee in any country where a Product is sold or distributed, or a sublicense is issued, the Licensee will convert the amount owed to The Regents into United States currency and will pay The Regents directly from another source of funds for the amount impounded.

        4.13     In the event any patent or claim under Patent Rights is held invalid in a final decision by a court of competent jurisdiction and last resort and from which no appeal has or can be taken, Licensee, its Affiliates, Joint Ventures, or sublicensees are not obligated to pay royalties based on such patent or claim, or any claim patentably indistinct therefrom as of the date of final decision. The Licensee, its Affiliates, Joint Ventures, or sublicensees will not, however, be relieved from paying: (1) royalties that accrued before the final decision; (2) royalties that are based on another unexpired patent or claim; (3) royalties that are not involved in the final decision; or (4) Profits due under Paragraph 4.1b, and royalties due on Identified Products under Paragraph 4.1d.

        4.14     No royalties will be collected or paid to the Regents on Products and Service Products sold to the United States Government. The Licensee, its Affiliates, Joint Ventures or sublicensees will reduce the amount charged for Products and Service Products distributed to the United States Government by an amount equal to the royalty otherwise due The Regents for such Products and Service Products.

5.     Due Diligence

        5.1     The Licensee, upon execution of this Agreement, will diligently proceed to develop, manufacture, market, and sell Identified Products and to develop and to provide Services to its customers, in quantities sufficient to meet market demand therefor.

        5.2     The Licensee will be entitled to exercise prudent and reasonable business judgment in the manner in which it meets its due diligence obligations. In no case, however, will the Licensee be relieved of its obligations to meet the due diligence provisions of this Article 5 (Due Diligence).

        5.3     The Licensee will obtain all necessary governmental approvals in each country in which Licensee manufactures and sells Covered Products, Non-Patent Products, and Identified Products and provides Services to its customers.

        5.4     Subject to Paragraph 5.6, The Regents will have the right to [***] if the Licensee is unable to perform any of the following:

        5.5     In the event reproducible data shows that functional expression of human T1R1, T1R2, or any member of the T2R receptor family can be used in a format suitable for identifying taste modulators consisting of a sweet or salt antagonist, inverse agonist, or agonist, then additional due diligence provisions, such as milestone events and the corresponding dates in which such milestone events will be met, will be added to this Agreement upon the good-faith negotiations of the Parties.

        5.6     To exercise the right to [***] , The Regents will give Licensee written notice of the deficiency. If Licensee does not cure the deficiency within sixty (60) days after the written notice takes effect and does not demonstrate to the Regents' satisfaction, by written, tangible evidence, that such default has been cured, then The Regents may, at its option, [***] . The exercise of this right and option by The Regents supersedes the rights granted in Article 2 (Grant). Any notice given by either Party will be subject to Article 20 (Notices).

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6.     Progress and Royalty Reports

        6.1     Licensee will provide The Regents with a progress report every six months beginning on August 31, 2000, and continuing until the first commercial sale in the United States, Europe, and Japan for each of the following Product categories: Covered Product, Identified Product, and Services.

        6.2     The progress reports submitted under Paragraph 6.1 will cover the development and testing of all Products, and the receipt of all governmental approvals necessary for the marketing of these Products. In particular, the progress reports will include, but not be limited to, the following topics directly related to Products so that The Regents may determine Licensee's progress in developing and testing Products and whether Licensee has met its diligence obligations set forth in Article 5 (Due Diligence) above:

        6.3     The Licensee will report to The Regents the first date Licensee receives Profits and the date of first commercial sale of each Product in the United States, Europe and Japan by reporting these dates in its subsequent progress and royalty reports.

        6.4     After the first commercial sale of a Product, the Licensee will provide The Regents with quarterly royalty reports on or before each February 28, May 31, August 31, and November 30 of each year. Each royalty report will cover the most recently completed quarter (October through December, January through March, April through June, and July through September) and will show:

        6.5     If no sales have been made on Products or no Profits have been received by Licensee during any reporting period after the first commercial sale of a Product or the first date Profit were received, then a statement to that fact is required.

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7.     Books and Records

        7.1     The Licensee will keep accurate books and records showing all Products manufactured, used, or sold and Profits received under the terms of this Agreement. Such books and records will be held in safe keeping for at least five years after the date of the royalty payment to which they pertain. The Regents and its representatives and agents may inspect such books and records at reasonable times, and not more than once per calendar year, as agreed to in advance by Licensee, to determine the accuracy of the books and records and to determine whether Licensee is in compliance with the terms of this Agreement.

        7.2     The Regents will pay the fees and expenses of its representatives that perform the inspection as specified in Paragraph 7.1. If, however, an error in royalties or Sublicense Fees is discovered that amounts to more than five percent (5%) of the total royalties and Sublicense Fees due for the first three years after the effective date of this agreement, or an error in royalties or Sublicensee Fees that amounts to more than ten percent (10%) of the total royalties and Sublicense Fees for any year after the third year past the effective date of this Agreement, then the fees and expenses of these representatives will be borne by the Licensee.

8.     Life of the Agreement

        8.1     Unless otherwise terminated by operation of law or by acts of the Parties in accordance with the terms of this Agreement, this Agreement will be in force from the effective date recited on page one and will remain in effect until the later to occur of the following: (a) the expiration of the last-to-expire patent licensed under this Agreement; or (b) for ten (10) years from the date of the last Identified Product to be introduced to the market in the United States by Licensee, its Affiliates, Joint Ventures, or sublicensees.

        8.2     Any termination of this Agreement will not affect the rights and obligations set forth in the following Articles:

Article 7   Books and Records

Article 11

 

Disposition of Products and Biological Materials on Hand Upon Termination

Article 14

 

Use of Names and Trademarks

Article 15

 

Limited Warranty

Paragraph 16.5

 

Patent Prosecution and Maintenance

Article 19

 

Indemnification

Article 24

 

Failure to Perform

Article 29

 

Confidentiality

        8.3     Any termination of this Agreement will not relieve the Licensee of its obligation to pay any monies due and owing at the time of, or prior to, such termination. Licensee is not obligated to pay The Regents any issue fees due under Paragraph 3.1 and any minimum annual royalties due under Article 4, which fees and royalties are not due and owing at the effective date of termination.

9.     Termination by The Regents

        9.1     Subject to Paragraph 5.6, if Licensee violates or fails to perform any term or covenant of this Agreement, then The Regents may give written notice of default (Notice of Default) to the Licensee. If Licensee fails to cure the default within sixty (60) days after such notice takes effect, then The Regents

13


will have the right to terminate this Agreement by giving a second written notice (Notice of Termination) to Licensee. If a Notice of Termination is sent to Licensee, this Agreement will automatically terminate on the date such notice takes effect. Termination of this Agreement will not relieve the Licensee of its obligation to pay any royalty, minimum annual royalty, reimbursement for patent costs, and Sublicense Fee owing at the time of, or prior to, such termination and will not impair any accrued right of The Regents. These notices will be subject to Article 20 (Notices).

10.   Termination by the Licensee

        10.1     The Licensee will have the right at any time to terminate this Agreement in whole or with respect to any portion of Patent Rights or Property Rights by giving to The Regents a written Notice of Termination. Subject to Article 20 (Notices), if a Notice of Termination is sent to The Regents, this Agreement, or that portion of the Patent Rights or Property Rights subject to such Notice of Termination, will automatically terminate sixty (60) days after such notice takes effect.

        10.2     In the event of termination, Licensee is not relieved of any obligation or liability that has accrued hereunder prior to or at the time of termination, including any obligation to pay fees (e.g., Sublicense Fees), royalties, minimum annual royalties, or reimbursements of patent costs. Any performance(s) made by Licensee prior to the termination of this Agreement, including any payment made by Licensee, is not rescinded by the event of termination. Minimum annual royalties not already owed prior to or at the date of such Notice of Termination will not be owed to The Regents. Any rights of The Regents that arose under this Agreement prior to the termination will not be affected by he event of termination.

11.   Disposition of Products and Biological Materials on Hand Upon Termination.

        11.1     In the event this Agreement terminates prior to the expiration of its full term, Licensee may sell only previously made or partially made Products for a period of not more than [***] days following the effective date of termination. The sale of such Products will be subject to the terms of this Agreement including, but not limited to, the payment of Sublicense Fees and royalties at the rates, bases, and times provided herein, and the rendering of reports in connection therewith.

        11.2     Upon termination of this Agreement, Licensee will destroy any Biological Materials and Biological Products that Licensee has in its possession within [***] after the effective date of termination. Within [***] following the effective date of termination, Licensee will notify The Regents in writing that such Biological Materials and Biological Products have been destroyed.

12.   Supply of the Biological Material

        12.1     The Principal Investigators will initially supply Licensee with viable samples of the Biological Materials within sixty (60) days from the effective date recited on page one of this Agreement. To the extent Licensee requests and necessarily requires additional samples from the Principal Investigators during the term hereof, and the Principal Investigators have such additional samples in its possession and control, the Principal Investigators will supply such additional samples to the Licensee. Licensee will pay the actual handling and shipping costs for any samples provided.

13.   Maintenance of the Biological Material

        13.1     The Regents and the NIH expressly reserves the right to transfer the Biological Materials to one or more non-profit third parties for educational and non-commercial research purposes only. The Regents will instruct the Principal Investiga- tors that they can transfer the Biological Materials to non-profit third parties solely for educational and non-commercial research purposes under the terms and conditions set forth in the biological material transmission letter attached hereto as Appendix A. The NIH will instruct its inventors that they can transfer the Biological Materials to non-profit third

14


parties solely for educational and non-commercial research purposes under the terms and conditions set forth in the Uniform Biological Material Transfer Agreement issued by the NIH. The Licensee understands that The Regents' and the NIH's right to transfer the Biological Materials for educational and non-commercial research purposes could lead to the inadvertent loss or diminution of proprietary and commercial value of the Biological Materials. The Regents will use its best efforts to transfer the Biological Material to non-profit third parties in the manner set forth above in order to minimize the loss or diminution of value. If a loss does occur, The Regents agrees to negotiate in good faith for a reduction in payments owed by Licensee when such payments directly relate to the Biological Material.

14.   Use of Names and Trademarks

        14.1     Nothing contained in this Agreement will be construed as giving Licensee, the HHMI, or The Regents the right to use any name, trade name, trademark, or other designation (including contractions, abbreviations or other designations thereof) of any of the above-named entities for the purpose of advertising, publicity, or other promotional activities. Unless required by law or consented to in writing by the Executive Director, Research Administration and Technology Transfer of The Regents, the Licensee is expressly prohibited from using the name "The Regents of the University of California," the name of any campus of the University of California, the National Institutes of Health, or Howard Hughes Medical Institute for the purposes of advertising, publicity, or other promotional activities.

        14.2     The Regents, the NIH, and HHMI will be free to release the terms of this Agreement upon the request of, and only to the inventors and senior administrative officials of The Regents, the NIH, and HHMI. If such release is made, The Regents, the NIH, and HHMI will request that the terms of this Agreement be kept in confidence pursuant to Article 29 (Confidentiality). Should a third party inquire whether a license to Patent Rights is available, The Regents, the NIH, and HHMI may disclose the existence of this Agreement and the extent to which rights are granted under Article 2 (Grant). The Regents, the NIH, and HHMI will not disclose the name of the Licensee, except when The Regents, the NIH, or HHMI is required by law to release such information pursuant to the California Public Records Act or other applicable law.

15.   Limited Warranty

        15.1     The Regents, the U.S. government, and HHMI warrant to the Licensee that they have the lawful right to grant this license.

        15.2     The Invention, Biological Material, Products, Patent Rights, Property Rights and Patent Methods are provided WITHOUT WARRANTY OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE OR ANY OTHER WARRANTY, EXPRESS OR IMPLIED. THE REGENTS, THE U.S. GOVERNMENT, AND HHMI MAKE NO REPRESENTATION OR WARRANTY THAT THE INVENTION, BIOLOGICAL MATERIAL, PRODUCTS, PATENT RIGHTS, PROPERTY RIGHTS OR PATENT METHOD WILL NOT INFRINGE ANY OTHER PATENT OR OTHER PROPRIETARY RIGHT.

        15.3     IN NO EVENT WILL THE REGENTS, THE U.S. GOVERNMENT, OR HHMI BE LIABLE FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES RESULTING FROM EXERCISE OF THIS LICENSE OR THE USE OF THE INVENTION, BIOLOGICAL MATERIAL, PRODUCTS, PATENT RIGHTS, PROPERTY RIGHTS OR PATENT METHOD.

        15.4     Nothing in this Agreement will be construed as:

15


16.   Patent Prosecution and Maintenance

        16.1     The Regents will diligently prosecute and maintain the patent applications and patents under Patent Rights. The Regents will promptly provide the Licensee with copies of all relevant documentation so that Licensee may continually be informed on the status of the prosecution. Licensee may comment upon such documentation one month in advance of any initial deadline for filing a response to the U.S. or foreign patent office. If, however, Licensee has not commented sufficiently in advance of the initial deadline for filing a response with the appropriate government patent office, The Regents will be free to respond without considering Licensee's comments, if any. Both Parties will keep all prosecution related documents in confidence pursuant to the provisions of Article 29 (Confidentiality) herein. Counsel for The Regents will take instructions only from The Regents.

        16.2     The Regents will use all reasonable efforts to amend any patent application, including claims requested by Licensee, to protect the Covered Products, Services, and Patent Methods that are contemplated to be sold or practiced under this Agreement.

        16.3     The Regents will, at the request of the Licensee, file, prosecute, and maintain patent applications and patents under Patent Rights in foreign countries if such rights are available. The Licensee must notify The Regents within seven months of filing a corresponding United States patent application of its decision to file a counterpart foreign patent application. This notice concerning foreign filing must be in writing and must identify the countries desired. If The Regents does not receive written notice within the seven-month period, then the absence of such notice will be considered an election by License not to secure foreign patent rights on its behalf. The Regents will have the right to file patent applications at its own expense in any country not designated by Licensee, and such patent applications and resulting patents, if any, will not be included in the licenses granted under this Agreement.

        16.4     Licensee will reimburse The Regents for all past, present and future costs of preparing, filing, prosecuting and maintaining the United States and foreign patent applications, including costs for interference and opposition proceedings. All such costs incurred by The Regents prior to the execution of this Agreement will be due upon execution of this Agreement and will be payable at the time that the license issue fee is due and owing. The Licensee will reimburse The Regents for all other costs and charges within 30 days after Licensee's receipt of an itemized invoice from The Regents stating such cost.

16


        16.5     Licensee's obligation to underwrite and to pay patent preparation, filing, prosecution, maintenance, and related costs will continue for costs incurred by The Regents until three months after expiration of this Agreement or three months after receipt by either Party of a Notice of Termination. The Licensee will reimburse The Regents for all patent costs incurred during the term of this Agreement and for three months thereafter, whether or not invoices for such costs are received during the three month period after expiration of this Agreement or receipt by either Party of a Notice of Termination. The Licensee may, with respect to any particular patent application or patent, terminate its obligations to the patent application or patent in any or all designated countries upon giving The Regents advance written notice of three months. The Regents may continue prosecution or maintenance of such application(s) or patent(s) at its sole discretion and expense, provided, however, that the Licensee will have no further rights or licenses thereunder.

        16.6     The Licensee will notify The Regents of any change of status as a small entity (as defined by the United States Patent and Trademark Office), which includes notifying The Regents of its first sublicensee that does not qualify as a small entity.

17.   Patent Marking

        17.1     The Licensee will mark all Products, or containers thereof, made, used, or sold under the terms of this Agreement in accordance with the applicable patent marking laws.

18.   Patent Infringement

        18.1     In the event Licensee knows that one or more third parties are substantially infringing the Patent Rights under this Agreement, the Licensee will promptly notify The Regents in writing and provide The Regents with reasonable evidence of such infringement.

        18.2     Both Parties to this Agreement acknowledge that during the period and in a jurisdiction where the Licensee has exclusive rights under this Agreement, neither Party will notify a third party other than NIH and HHMI that an infringement of Patent Rights occurred without first obtaining consent of the other Party. Both Parties will use their best efforts in cooperation with each other to terminate the infringement without litigation.

        18.3     If the Licensee desires that Patent Rights be enforced against infringers, and the Licensee has exclusive rights under Patent Rights, the Licensee either may request The Regents to take legal action against the patent infringer or may request permission from The Regents to file suit against the patent infringer. Licensee's request must be made in writing and must include reasonable evidence of the infringement and resulting damages to the Licensee. If the infringing activity has not been abated within 90 days following the effective date of Licensee's request, then The Regents and The NIH will have the right to elect one of the following:

        The Regents and NIH will give written notice of their election to the Licensee within 100 days following the effective date of Licensee's written request. The Licensee, thereafter, may bring suit for patent infringement if and only if The Regents and the NIH elects not to commence suit and if the infringement occurred during the period and in a jurisdiction where the Licensee had exclusive rights under this Agreement. In the event Licensee elects to bring suit in accordance with this Paragraph, The Regents and NIH may thereafter join such suit at their own expense.

        18.4     The Party who brought the suit will pay for all legal costs and will recover any and all recoveries; provided, however, that if The Regents and/or the NIH brought suit on their own account,

17



then the Parties and the NIH may share in the expense and the recoveries will be allocated in the following order: (a) each party will be reimbursed in equal amounts for attorney's costs, fees, and other related expenses (to the extent that each party paid for such costs, fees, and expenses) until all such costs, fees, and expenses are reimbursed; and (b) each party will share equally in any remaining amount in proportion to the share of expenses paid by each party.

        18.5     Each party will cooperate with the others during litigation proceedings instituted hereunder but at the expense of the party who brought the suit. The party bringing suit will control such litigation, except that The Regents may be represented by counsel of its choice in any suit brought by the Licensee.

19.   Indemnification

        19.1     The Licensee will (and require its Affiliates, Joint Ventures and sublicensees to) indemnify, hold harmless, and defend The Regents, NIH, and HHMI, its officers, employees, agents, and the sponsors of the research (e.g. NIH and HHMI) that led to the Biological Materials and Invention; the inventors of any invention covered by patents or patent applications in Patent Rights (including Products and Patent Method contemplated thereunder) and their employers against any and all claims, suits, losses, damage, costs, fees, and expenses resulting from or arising out of exercise of this license or any sublicense. This indemnification will include, but will not be limited to, any product liability.

        19.2     The Licensee, at its sole cost and expense, will insure its activities in connection with the work or activities under this Agreement and obtain prior to initiating such work or activity, and keep in force, and maintain insurance as follows (or an equivalent program of self insurance):

Each Occurrence   $ 1,000,000
Products/Completed Operations Aggregate   $ 5,000,000
Personal and Advertising Injury   $ 1,000,000
General Aggregate (commercial form only)   $ 5,000,000

        19.3     The Regents will promptly notify the Licensee in writing of any claim or suit that has been brought against The Regents for which The Regents, NIH, or HHMI intends to invoke the provisions of this Article 19 (Indemnification). The Licensee also will keep The Regents informed on a current basis of its defense of any claims pursuant to this Article 19 (Indemnification).

18


20.   Notices

        20.1     Any notice or payment required to be given to either Party will be deemed to have been properly given and to be effective:

when sent to the respective addresses given below, or to another address as designated in writing by the Party changing its address.

In the case of the Licensee:   Ambryx Inc.
11099 North Torrey Pines Road, Suite 160
La Jolla, CA 92037
Telephone: (858) 646-8300
Facsimile: (858) 404-0750
Attention:
      Steve K. Snyder
Executive Director, Corporate Development
Telephone: (858) 646-8304

In the case of The Regents:

 

THE REGENTS OF THE UNIVERSITY OF CALIFORNIA
Office of the President
Office of Technology Transfer
1111 Franklin Street, 5th Floor
Oakland, CA 94607-5200
Telephone: (510) 587-6000
Facsimile: (510) 587-6090
Attention:
      Executive Director
Research Administration and Technology Transfer
Referring to: U.C. Case No. 1998-122

21.   Assignability

        21.1     This Agreement is binding upon and will inure to the benefit of The Regents, its successors and assigns, but will be personal to the Licensee. This Agreement will not be assigned by the Licensee to any third party without the prior written consent of The Regents, except that Licensee can assign this Agreement to its successor without prior written consent of The Regents provided that Licensee has sold all or substantially all of its business assets or in connection with the acquisition of Licensee. Any other attempt by Licensee to assign this Agreement is void unless Licensee obtains the prior written consent of The Regents.

22.   Late Payments

        22.1     In the event royalty payments, fees, or reimbursements for patent prosecution costs are not received by The Regents when due, the Licensee will pay to The Regents interest charges at a rate of ten percent (10%) simple interest per annum. Such interest will be calculated from the date payment was due until actually received by The Regents. The Regents' acceptance of any late payment interest from the Licensee under Article 22 will in no way affect the provision of Article 23 (Waiver) herein.

19


23.   Waiver

        23.1     If either Party waives any breach committed by the other Party of any term or covenant, such a waiver will not be deemed a waiver of any subsequent or similar breach.

24.   Failure to Perform

        24.1     In the event either Party fails to perform under the terms and covenants of this Agreement, and the other Party undertakes legal action in response to such failure, then any legal proceedings that arise from the action will be conducted in San Francisco, California, and the prevailing Party will be entitled to reasonable attorney's fees in addition to costs and necessary disbursements.

25.   Governing Laws

        25.1     THIS AGREEMENT WILL BE INTERPRETED AND CONSTRUED IN ACCORDANCE WITH THE LAWS OF THE STATE OF CALIFORNIA, excluding any choice of law rules that would direct the application of the laws of another jurisdiction, but the scope and validity of any patent or patent application will be governed by the applicable laws of the country of such patent or patent application.

26.   Government Approval or Registration

        26.1     If this Agreement or any associated transaction is required by the law of any nation to be either approved or registered with any governmental agency, the Licensee will assume all legal obligations to do so. The Licensee will notify The Regents if it becomes aware that this Agreement is subject to a United States or foreign government reporting or approval requirement. The Licensee will make all necessary filings and pay all costs including fees, penalties, and all other out-of-pocket costs associated with such reporting or approval process.

27.   Export Control Laws

        27.1     The Licensee will observe all applicable United States and foreign laws with respect to the transfer of Products and related technical data to foreign countries, including, without limitation, the International Traffic in Arms Regulations (ITAR) and the Export Administration Regulations.

28.   Force Majeure

        28.1     The Parties to this Agreement will be excused from any performance required hereunder if such performance is rendered impossible or unfeasible due to any acts of God, catastrophes, or other major events beyond their reasonable control, including, without limitation, war, riot, and insurrection, laws, proclamations, edicts, ordinances, regulations, strikes, lock-outs, or other serious labor disputes, floods, fires, explosions, or other natural disasters. Either Party to this Agreement, however, will have the right to terminate this Agreement upon thirty (30) days prior written notice if either Party is unable to fulfill its obligations under this Agreement due to any of the causes mentioned above and such inability to perform continues for a period of one year. Notices given under this paragraph will be subject to Article 20 (Notices). When such events have abated, the Parties' respective obligations hereunder shall resume.

29.   Confidentiality

        29.1     The Licensee and The Regents respectively will treat and maintain the proprietary business, patent prosecution and technical information, and other proprietary information, (collectively referred to as "Proprietary Information"), of the other Party in confidence using at least the same degree of care as that Party uses to protect its own proprietary information of a like nature for a period of time

20


beginning on the date of disclosure of such Proprietary Information and until [***] after the date of termination of this Agreement. This confidentiality obligation will also apply to the information defined as "Data" under the Secrecy Agreement, and such Data will be treated as Proprietary Information hereunder.

        29.2     All Proprietary Information will be labeled or marked confidential or as otherwise marked appropriately by the disclosing Party. In the event Proprietary Information is orally disclosed, it will be reduced to writing or to some other tangible form, marked and labeled as set forth above by the disclosing Party, and delivered to the receiving Party within thirty (30) days after the oral disclosure as a record of the disclosure and its confidential nature thereof. Notwithstanding the foregoing, the Licensee and The Regents may use and disclose Proprietary Information to HHMI, its employees, agents, consultants, contractors, the NIH, and in the case of the Licensee, its sublicensees, provided that any such parties are bound by a like duty of confidentiality.

        29.3     Nothing contained in this Agreement will in any way restrict or impair the right of the Licensee or The Regents to use, disclose, or otherwise deal with any Proprietary Information:

        29.4     Upon termination of this Agreement, the Licensee and The Regents will destroy or return to the disclosing Party Proprietary Information received from the other in its possession within fifteen (15) days following the effective date of termination. The Licensee and The Regents will provide each other, within thirty (30) days following termination, a written notice that Proprietary Information has been returned or destroyed. Each Party may, however, retain one copy of Proprietary Information for archival purposes in non-working files.

30.   Miscellaneous

        30.1     The headings of the several Articles are inserted for convenience of reference only and are not intended to be a part of or to affect the meaning or interpretation of this Agreement.

        30.2     This Agreement will not be binding upon the Parties until it has been signed below on behalf of each Party, in which event, it will be effective as of the date recited on page one.

        30.3     No amendment or modification hereof will be valid or binding upon the Parties unless made in writing and signed on behalf of each Party.

        30.4     This Agreement embodies the entire understanding of the Parties and will supersede all previous communications, representations or understandings, either oral or written, between the Parties relating to the subject matter hereof. The Secrecy Agreement and Letter Agreement specified in the Recitals above are hereby terminated.

        30.5     If any of the provisions contained in this Agreement are held to be invalid, illegal, or unenforceable in any respect, such provisions will not affect any other provisions of this Agreement, and this Agreement will be construed as if such invalid, illegal or unenforceable provisions had never been contained herein.

        30.6     This Agreement has been negotiated and prepared jointly by both Parties and will not be construed for or against any Party, but will be given a fair and reasonable construction in accordance with the intention of the Parties.

        30.7     This Agreement contains Appendix A, Appendix B, Appendix C, and Exhibit A which are attached and incorporated herein.

21


        Both The Regents and the Licensee have executed this Agreement, in duplicate originals, by their duty authorized officers on the date and year hereinafter written.

Ambryx Inc.   The Regents of the University of California

By

 

/s/  
PAUL GRAYSON       

 

By

 

/s/  
TERRENCE A. FEUERBORN       
    (Signature)       (Signature)

 

 

 

 

 

 

for

Name

 

Paul Grayson


 

Name:

 

Terrence A. Feuerborn
    (Please Print)        

Title

 

President & CEO


 

Title:

 

Executive Director, Research Administration and Technology Transfer

Date

 

3/10/00


 

Date

 

3/10/00

22


Appendix A—Page 1a

University of California

Instructions for Standard Letter Transmitting
Biological Materials to Universities and
Nonprofit Institutions

        The attached letter is authorized for use by University of California Inventors and administrators only with scientists at other universities and nonprofit research institutions when transmitting cell lines, plasmids and the like for non-commercial research purposes.

23


Appendix A—Page 2a

SAMPLE LETTER FOR USE PRIOR TO TRANSMISSION OF BIOLOGICAL MATERIALS TO INVESTIGATORS AT UNIVERSITIES OR NON-PROFIT RESEARCH INSTITUTIONS

(date)

IN DUPLICATE

To:

        This is to (acknowledge receipt of your letter) (confirm our telephone conversation) in which you requested certain research materials developed in this laboratory be sent to you for scientific research purposes. The materials concerned, which belong to The Regents of the University of California are:                        .

        While I cannot transfer ownership of these materials to you, I will be pleased to permit your use of these materials within your (university) (Non-Profit Research Institution) laboratory for (our cooperative) scientific research. However, before forwarding them to you, I require your agreement that the materials will be received by you only for use in (our cooperative work) (scientific research), that you will bear all risk to you or any others resulting from your use, and that you will not pass these materials, their progeny or derivatives, on to any other party or use them for commercial purposes without the express written consent of The Regents of the University of California. You understand that no other right or license to these materials, their progeny or derivatives, is granted or implied as a result of our transmission of these materials to you.

        These materials are to be used with caution and prudence in any experimental work, since all of their characteristics are not known.

        As you recognize, there is a processing cost to us involved in providing these materials to you. We will bill you for our processing costs, which will amount to $                        .

        If you agree to accept these materials under the above conditions, please sign the enclosed duplicate copy of this letter, then have it signed by an authorized representative of your institution, and return it to me. Upon receipt of that confirmation I will forward the material(s) to you.

24


Appendix A—Page 3a

        (Note: other Paragraphs discussing the relevant literature, the nature of the work, hazards relating to materials to be sent etc. may be appropriate. These will vary depending on the individual circumstances and the relationship between the two parties previously established. Be sure to retain a signed copy when received and send a photocopy of the completed agreement to the University of California, Office of Technology Transfer, 1111 Franklin Street, 5th Floor, Oakland, CA 94607-5200)

Sincerely yours,                                                

ACCEPTED:    

RESEARCH INVESTIGATOR

 

 


Printed Name

 

 


(Signature)

 

 


Date

 

 

RESEARCH UNIVERSITY OR NON-PROFIT INSTITUTION

 

 


Printed Name

 

 


(Signature)

 

 


Date

 

 

25


Appendix B—Page 1b

        The INVENTOR listed below understand and agree to abide by the terms and conditions of Articles 12 and 13 of the Exclusive License and Bailment Agreement between The Regents of the University of California and Ambryx, Inc. effective 3/23/00 and to instruct all relevant personnel working within their laboratory to act accordingly. Said Paragraphs read, in part, as follows:

        The Biological Material is defined in said Agreement as follows:

26


Appendix B—Page 2b

By:    

/s/  
CHARLES S. ZUKER       
Charles S. Zuker

 

3/23/00

Date

27


Appendix C—Page 1c

CHANCELLOR APPROVAL OF COMMERCIAL RESTRICTIONS OF TANGIBLE RESEARCH PRODUCTS

        In May 1989, the University of California issued the Guidelines on University-Industry Relations ("Guidelines"). Guideline 10 entitled "Tangible Research Products" requires that when the commercial availability of tangible research products resulting from the conduct of research is restricted by a license, approval must be obtained from the Chancellor of the campus where the research took place.

        The Exclusive License and Bailment Agreement ("Agreement") between THE REGENTS OF THE UNIVERSITY OF CALIFORNIA ("The Regents") and Ambryx Inc. ("Licensee") entitled "Nucleic Acids Encoding G-Protein Coupled Receptors and Assays for Identifying Taste Modulators" contains provisions that restrict the transfer of certain tangible research products to the commercial competitors of the Licensee. The provisions of the Agreement require that The Regents will convey tangible research products to others for educational and research purposes under a biological material transfer agreement. In accordance with the Guidelines, this Agreement permits the University to retain the discretion to publish any results of research at any time and to disseminate the tangible materials for educational and research purposes.

        Chancellor Robert C. Dynes of the University of California, San Diego, approves the provisions of the attached Agreement that restrict the commercial availability of tangible research products.

Approval:

/s/   ROBERT C. DYNES       
Robert C. Dynes, Chancellor
  3/7/00
Date

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[University of California Letterhead]

        March 10, 2000

Mr. Paul Grayson
President and CEO
Ambryx, Inc.
11099 North Torrey Pines Road, Suite 160
La Jolla, CA 92037

Re:
Side Letter Agreement Exclusive License and Bailment Agreement between The Regents of the University of California and Ambryx, In.

Dear Mr. Grayson:

        Reference is made to that certain Exclusive License and Bailment Agreement (the "Agreement") dated as of the date hereof between The Regents of the University of California ("The Regents") and Ambryx Inc. ("Licensee"). Capitalized terms used but not defined herein shall have the meanings assigned to them in the Agreement.

        Notwithstanding any other provisions of the Agreement, the following shall apply:

1.
Licensee acknowledges that the grant by The Regents to Licensee pursuant to the Agreement of any interest of the NIH in the Patent Rights shall be subject to the review and approval thereof by the NIH ("NIH Approval").

2.
If NIH Approval shall not have been obtained by the date that is thirty (30) days from the date hereof, then in lieu of any provisions of the Agreement requiring payments by Licensee, Licensee shall [***] . In such event, at such time thereafter as NIH Approval is obtained, Licensee shall pay to The Regents, within ten (10) days of written certification to Licensee thereof by The Regents, all payments that would have been payable by Licensee following the date hereof but which were deferred by the provisions of this paragraph.

3.
If NIH Approval is obtained and Licensee has received written certification hereof by The Regents on or prior to the date that is thirty (30) days from the date hereof, then paragraphs 1 and 2 above shall not apply and Licensee shall make all payments required to be made by Licensee in accordance with the terms of the Agreement.

4.
Licensee further acknowledges that the grant by The Regents to Licensee pursuant to the Agreement of any interest of The Regents in the Patent Rights shall be subject to the execution by the Chancellor of Appendix C to the Agreement ("The Regents Approval").

5.
The Regents will proceed to obtain NIH Approval and The Regents Approval as soon as possible.

        The foregoing is agreed to as of the date set forth above.

Ambryx Inc.   The Regents of the University of California

By

 

/s/  
PAUL GRAYSON       

 

By

 

/s/  
[TEXT ILLEGIBLE]       
Title   3/10/00 President & CEO   Title   3/10/00 Associate Director

29


[Senomyx, Inc. Letterhead]

Via Certified U.S. Mail

11099 North Torrey Pines Road
La Jolla, CA 92037

October 9, 2000

The Regents of the University of California
Office of the President
Office of Technology Transfer
1111 Franklin Street, 5 th Floor
Oakland, CA 94607-5200

Attention:   Executive Director,
Research Administration and Technology Transfer
Re:
Exclusive License and Bailment Agreement between The Regents of the University of California and Ambryx, Inc. dated March 10, 1999 "Nucleic Acids Encoding Proteins Used in Assays for Identifying Taste Modulators" U.C. Case No. 1998-122

Dear Sir or Madam:

        In accordance with Section 20.1 of the above-referenced Agreement, following is a change to the notice requirements in the case of the Licensee:

        Please update your records accordingly.

Sincerely,

/s/   TRACY KOHLENBERG       
Tracy Kohlenberg
Vice President, Corporate Counsel
Phone (858) 646-8306
Fax (858) 404-0750
   

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Exclusive License and Bailment Agreement between The Regents of the University of California and Ambryx Inc. for "Nucleic Acids Encoding Proteins Used in Assays for Identifying Taste Modulators" UC Case Nos. 1998-122,1998-306,1999-0151 1999-029,11999-168, 1999-203, 1999-204, and 2000-045

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Exhibit 10.12

***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.


COLLABORATIVE RESEARCH

AND

LICENSE AGREEMENT

BETWEEN

SENOMYX, INC.

AND

AURORA BIOSCIENCES CORPORATION


COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

        THIS AGREEMENT is entered into as of the Effective Date by and between SENOMYX, INC., a Delaware corporation having offices at 11099 North Torrey Pines Road, La Jolla, California 92037 ("Senomyx"), and AURORA BIOSCIENCES CORPORATION, a Delaware corporation having offices at 11010 Torreyana Road, San Diego, California 92121 ("Aurora").

RECITALS

        WHEREAS, Senomyx conducts research in the field of chemosensation, an objective of which is to discover potential biological targets and develop assays for use in taste, olfaction and pheromone detection; and

        WHEREAS, Aurora develops assays and screening systems and related biologies/chemistries used therein; and

        WHEREAS, Senomyx and Aurora are interested in collaborating in the development of assays and screening systems to identify and develop small molecules for use in consumer products and therapeutics.

AGREEMENT

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree as follows:

1.     DEFINITIONS

        As used herein, the following terms shall have the following meanings:

        "Agreement" means this agreement, together with all exhibits attached hereto, as the same may be amended or supplemented from time to time hereafter by a written agreement duly executed by authorized representatives of each party.

        "Assay Platform" means one or more cell lines or biochemical screens developed under the collaboration by Aurora and/or Senomyx for Targets, as described in a Work Plan.

        "Aurora Compound" means any chemical Controlled by Aurora.

        "Aurora Know-How" means all Know-How related to the Assay Platforms or Aurora Reporters, which is not covered by the Aurora Patent Rights, but is necessary to practice the licenses granted under this Agreement, and which is Controlled by Aurora as of the Effective Date or developed by Aurora in the course of performing activities under a Work Plan.

        "Aurora Patent Rights" mean all Patent Rights that claim Assay Platforms or Aurora Reporters, which are necessary to practice the licenses granted under this Agreement, and which are Controlled by Aurora as of the Effective Date or developed by Aurora in the course of performing activities under a Work Plan, but excluding any Joint Patent Rights. The Aurora Patent Rights as of the Effective Date are set forth on Exhibit 1.

        "Aurora Reporter" means any of the reporters described in Exhibit 3.

        "Aurora Screening Program" has the meaning set forth in Section 2.4.

        "Aurora Technology" means Aurora Patent Rights and Aurora Know-How.

        "Collaborative Period" means the period beginning on the Effective Date and ending three (3) years thereafter, unless terminated earlier in accordance with Section 10.2, 10.3 or 10.4.

        "Compound Supply" has the meaning set forth in Section 2.4.1.

2


        "Confidential Information" means all information, Inventions and Know-How disclosed by one party to the other party pursuant to this Agreement, including, without limitation, information and material (whether or not patentable) regarding technology, products, research, development, manufacturing, marketing, finances, personnel or other business information or objectives which is designated as confidential in writing by the disclosing party, whether by letter or by the use of an appropriate stamp or legend, prior to or at the time any such material, trade secret or other information is disclosed by the disclosing party to the other party. Notwithstanding the foregoing to the contrary, Know-How or other information which is orally, electronically or visually disclosed by a party, or is disclosed in writing without an appropriate letter, stamp or legend, shall constitute Confidential Information of a party if the disclosing party, within thirty (30) days after such disclosure, delivers to the other party a written document or documents describing the Know-How or other information and referencing the place and date of such oral, visual, electronic or written disclosure and the names of the persons to whom such disclosure was made.

        "Control" or "Controlled" means, with respect to intellectual property, possession by a party, as of the Effective Date or during the Collaborative Period, of the ability to grant a license or sublicense in accordance with the terms of this Agreement, without violating the terms of any agreement by such party with any Third Party that is in effect on the Effective Date.

        "Derivative" means a chemical that has a structure based on data derived from a Hit; provided that such chemical has the same modulating effect as such Hit when tested in the same assay which was used to identify such Hit. It is understood that Senomyx will test chemicals having a structure based on data derived from a Hit in the same assay which was used to identify such Hit. It is further understood that a Derivative includes a chemical derived from another Derivative.

        "Development Compound" means any Hit or Derivative selected for development as a Product and for which studies necessary for an IND filing (e.g., good laboratory practice safety studies) have been initiated.

        "Effective Date" means the date that this Agreement is signed by the last party to sign below.

        "Excluded Compounds" has the meaning set forth in Section 2.4.4.

        "FDA" means the United States Food and Drug Administration, or any successor agency having regulatory jurisdiction over the manufacture, distribution and sale of drugs in the United States or the equivalent governmental agency in any other jurisdiction.

        "Field I" means [***] .

        "Field II" means [***] .

        "Full Time Equivalent" or "FTE" means the full time equivalent of one (1) Aurora scientist, based on a minimum of [***] hours per year.

        "GAAP" means generally accepted accounting principles consistently applied.

        "Hit" means any chemical (e.g. a small molecule or protein) identified or discovered in the course of screening such chemical by or for Senomyx using an assay which incorporates or uses the Aurora Technology or an Aurora Reporter.

        "IND" means an Investigational New Drug Application filed with the FDA to commence human clinical testing of a Product.

        "Internal Research" means self-funded or Third Party funded biological research conducted by Senomyx at the premises of Senomyx, including the development of screens, the performance of screening, the cloning of genes and the validation of Targets. Notwithstanding the foregoing, Internal Research does not include use of an Aurora Reporter or the Aurora Technology in a promoterless,

3



gene trap, enhancer trap or promoter trap vector for integration into a mammalian genome using non-homologous recombination integration methods (e.g. random integration).

        "Invention" means any new and useful process, method, or composition of matter, or improvement thereto, whether or not patentable.

        "Joint Invention" has the meaning set forth in Section 4.3.4.

        "Joint Patent Rights" means all Patent Rights containing one or more claims to a Joint Invention.

        "Know-How" means information and data, whether or not patentable, which is not generally known to the public, including, without limitation, designs, concepts, formulae, techniques, practices, processes, methods, knowledge, skill, experience, expertise, technical information and data, including pharmacological, toxicological and clinical test data, analytical and quality control data, patent and legal data or marketing, sales and manufacturing data.

        "Licensee" means any Third Party to whom Senomyx or any of its Affiliates grants a license, sublicense or other right to manufacture, use, sell, offer for sale, distribute and/or import one or more Products or Development Compounds.

        "Licensor" means any Third Party that grants Senomyx or any of its Affiliates a license, sublicense or other right to manufacture, use, sell, offer for sale, distribute and/or import one or more Products or Development Compounds.

        "Materials" mean any reagents, promoters, enhancers, vectors, plasmids, genes, polynucleotides, cell lines, proteins and fragments thereof, peptides, antigens, antibodies, antagonists, agonists, inhibitors, compounds and chemicals.

        "NDA" means a New Drug Application or the equivalent, and all supplements pursuant to the requirements of the FDA, including all documents, data and other information concerning Products which are necessary for FDA approval to market a Product, or the equivalent governmental approval in any other country.

        "Net Sales" means, with respect to a Product, the gross amount invoiced by Senomyx, its Affiliates, Licensors, Licensees, and/or permitted sublicensees on sales or other transfers of the Product, less the following items:

        Where Senomyx distributes to an Affiliate, Licensor, Licensee, a joint venture or permitted sublicensees for end use by such Affiliate, Licensor, Licensee, joint venture or permitted sublicensees then such distribution will be considered a sale at list price normally charged to independent Third Parties and Aurora will be entitled to collect a royalty on such sale in accordance with Section 3. Such amounts shall be determined from the books and records of Senomyx, its Affiliates, Licensor, Licensees, joint venture and/or its permitted sublicensees, maintained in accordance with GAAP.

        "Patent Rights" means all rights associated with all United States or foreign (including regional authorities such as the European Patent Office) regular or provisional patents or patent applications, including any continuation, continuation-in-part, or division thereof or any substitute application therefor or equivalent thereof, and any patent issuing thereon, including any reissue, reexamination or extension thereof and any confirmation patent or registration patent or patent of additions based on any such patent.

4



        "Phase II Clinical Trial" means studies in humans of the safety, dose ranging and efficacy of a Product in Field I.

        "Product" means any composition of matter which incorporates a Development Compound or is manufactured using the Aurora Technology or an Aurora Reporter.

        "Royalty Term" means, in the case of any Product and as to any country, the period of time commencing on the first commercial sale for use or consumption of such Product in such country and ending upon the date that is ten (10) years after the date of such first commercial sale for use or consumption of such Product in such country.

        "Senomyx Compound" means any chemical Controlled by Senomyx.

        "Senomyx Know-How" means all Know-How related to the Assay Platforms (including the Targets), which is not covered by the Senomyx Patent Rights, but is necessary to accomplish the activities to be conducted under this Agreement, and which is Controlled by Senomyx as of the Effective Date or developed by Senomyx in the course of performing activities under a Work Plan.

        "Senomyx Patent Rights" means all Patent Rights which are necessary to accomplish the activities to be conducted under this Agreement, and which are Controlled by Senomyx as of the Effective Date or developed by Senomyx in the course of performing activities under a Work Plan, but excluding any Joint Patent Rights. The Senomyx Patent Rights as of the Effective Date are set forth on Exhibit 2.

        "Senomyx Technology" means Senomyx Patent Rights and Senomyx Know-How.

        "Steering Committee" has the meaning set forth in Section 2.1.

        "Stock Purchase Agreement" means the stock purchase agreement set forth on Exhibit 4.

        "Target" means a target identified in taste, olfaction and pheromone detection and listed on Exhibit 5, as modified from time to time by the Steering Committee as provided under Section 2.2.

        "Term" has the meaning set forth in Section 10.1.

        "Third Party" means any person or entity other than Aurora or Senomyx.

        "Tracking Record" has the meaning set forth in Section 5.5.2.

        "Ultra-High Throughput Screening System" or "UHTSS™ System" means a technology platform sold by Aurora that has the capability of screening over 100,000 compounds per day, accessed from a store of compounds, with the additional ability to capture and store large volumes of information.

        "Validation" has the meaning set forth in Section 2.3.3.

        "Validation Criteria" means the parameters, standard and results established by the Steering Committee for each Assay Platform based on the performance criteria provided in Exhibit 6.

        "Voltage Ion Probe Reader" or "VIPR" means the instrumentation described in Exhibit 7.

        "Voltage Ion Probe Reader II" or "VIPR II" means the instrumentation described in Exhibit 7.

        "Work Plan" has the meaning set forth in Section 2.3.1.

5


2.     COLLABORATION, ASSAY PLATFORM DEVELOPMENT AND SCREENING PROGRAM

        2.1    Steering Committee.     No later than ten (10) days after the Effective Date, the parties shall establish a joint steering committee (the "Steering Committee"). The Steering Committee shall prepare and manage each Work Plan. The Steering Committee shall consist of two (2) representatives designated by Senomyx and two (2) representatives designated by Aurora. Each representative to the Steering Committee will have one vote. The Steering Committee will meet no later than thirty (30) days after the Effective Date and at least four (4) times per year using mutually agreed upon meeting locations and formats including tele- and video-conferencing. On an alternating basis, one party shall promptly prepare and deliver to the members of the Steering Committee minutes of such meetings for review and approval of both parties. Aurora and Senomyx shall flip a coin to determine who shall prepare the minutes for the first Steering Committee meeting. Decisions in the Steering Committee will be made by unanimous vote, at a meeting where all four (4) voting representatives are present. All unresolved disputes will be settled in accordance with Section 11.13, or as otherwise mutually agreed upon in writing.

        2.2    Target Selection.     The Steering Committee may, in its sole discretion, add and/or remove Targets from the list of Targets set forth on Exhibit 5.

        2.3    Assay Platform Program.     

        2.4    Screening by Aurora.     During the Collaborative Period and for [***] thereafter, Senomyx may purchase from Aurora contract screening pursuant to Section 3.3. Aurora will screen Aurora Compounds or Senomyx Compounds as determined by the Steering Committee and provide re-tests of putative Hits, and determination of crude EC50s or IC50s as determined by the Steering Committee (an "Aurora Screening Program").

6


        2.5    Development of Products.     Senomyx will be responsible, at Senomyx's expense, for all formulation and regulatory approval of Products arising out of this Agreement. Senomyx shall use reasonable efforts, consistent with commercial business practices, to develop any Product, to perform all regulatory activities relating to the manufacture, use or sale of any Product, and to commercialize and market any Product in any country. All regulatory filings made or filed by Senomyx for any Development Compound or Product shall be owned solely by Senomyx. At Senomyx's request and expense, Aurora shall cooperate to the extent reasonably necessary to permit Senomyx to perform the foregoing activities.

        2.6    Supply of VIPR and Option to Upgrade to VIPR II.     Within thirty (30) days after the Effective Date, Aurora will deliver a VIPR to the Senomyx facility in La Jolla, California, or another Senomyx location mutually agreed upon by the parties, and within thirty (30) days of receipt of such VIPR, Aurora shall install and commission it to demonstrate functionality as to the instrumentation specifications listed in Exhibit 7. On or before [***] , Senomyx shall have the option to exchange the VIPR for a VIPR II by providing written notice to Aurora and making the additional payment to Aurora in accordance with Section 3.9. Within [***] of receipt of such notice, Aurora will deliver a VIPR II to the Senomyx facility in La Jolla, California, or another Senomyx location mutually agreed by the parties, and within [***] of receipt of such VIPR II, Aurora shall (i) install and commission the VIPR II to demonstrate functionality as to the instrumentation specification listed in Exhibit 7, and (ii) return the VIPR to Aurora. Subject to payment of the warranty fee set forth in Section 3.9, Aurora will provide to Senomyx Aurora's then-current standard warranty as described on Exhibit 7 for such VIPR or VIPR II for a period of [***] [***] from the date of delivery of the VIPR, provided that such warranty may be extended as provided for in Section 3.9.

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3.     FINANCIAL TERMS

        3.1    Annual Research Support.     Each year during the Collaborative Period, Senomyx shall pay Aurora for [***] FTEs at an annual rate of [***] per FTE. These payments shall be made in advance on an equal quarterly basis. The first payment shall be made within ten (10) business days following the Effective Date. These payments are inclusive of overhead, labor, and supplies; provided, however , that in any given year, a portion of these payments may be allocated to cover the cost of high throughput screening of Senomyx Compounds by Aurora [***] with a commensurate reduction in the allocation of payments for FTEs. These payments shall not cover the cost associated with providing the Compound Supply to Aurora or other unanticipated materials, as agreed to by the parties in advance in writing, or the costs of high throughput screening for over [***] . Additional funding, if any, shall be proposed by the Steering Committee and agreed to by the parties in advance in writing.

        3.2    Validation Payments.     Senomyx will pay to Aurora the following non-creditable, non-refundable milestone payments within thirty (30) days following achievement of the following milestone events:

Milestone

  Payment
[***]    
[***]    
[***]    

        3.3    Screening by Aurora.     Aurora will screen Aurora Compounds and Senomyx Compounds under each Aurora Screening Program in accordance with Section 2.4. Senomyx will pay Aurora for such screening within thirty (30) days after the completion of such screening. For screening conducted by Aurora using its ultra-high throughput screening system, Senomyx will pay Aurora [***] , with [***] . For screening conducted by Aurora using its VIPR, Senomyx will pay Aurora [***] , with [***] . The parties will negotiate in good faith the payments to be made by Senomyx to Aurora for Aurora Compounds which may be licensed to Senomyx hereunder, including, without limitation, [***] .

        3.4    Milestones and Royalties.     

Milestone

  Payment
[***]    
[***]    
[***]    
[***]    

8


        3.5    Supply of Aurora Reporters.     Within [***] of a written purchase order from Senomyx, Aurora will supply to Senomyx Materials pertaining to the Aurora Reporters. Senomyx will be charged for all Materials so delivered at Aurora's then-current list price less [ *** ] ; provided, however , that Senomyx will purchase [***] , as defined on Exhibit 3, on or before [ *** ] , at a price of [***] . Senomyx will pay for all Materials so ordered within thirty (30) days after delivery of such Materials to Senomyx.

        3.6    Aurora Stock Purchase.     Within ten (10) days following the Effective Date, Aurora will purchase four million eight hundred thousand dollars ($4,800,000) of Senomyx Series C preferred stock under terms and conditions consistent with its most recent round of financing and pursuant to the Stock Purchase Agreement at a price of four dollars, eighty cents ($4.80) per share.

        3.7    License Fee.     In partial consideration for the licenses granted under Section 4.1, Senomyx will pay to Aurora a non-creditable, non-refundable license fee of [***] within ten (10) days following the Effective Date.

        3.8    Purchase of VIPR and upgrade to VIPR II.     In consideration for the VIPR, Senomyx shall pay to Aurora [***] payable in two equal installments: (i)  [***] within [ *** ] after delivery of such VIPR to Senomyx, and (ii)  [ *** ] within [***] after the commissioning of such VIPR at Senomyx. If Senomyx exercises its option to exchange the VIPR for a VIPR II, then Senomyx will pay to Aurora an additional payment of [***] within [***] after the commissioning of such VIPR II at Senomyx. In consideration for the [***] VIPR warranty provided under Section 2.6, Senomyx shall pay to Aurora a warranty fee of [***] within [***] after the first anniversary of the date of delivery of the VIPR to Senomyx. Senomyx may, at its sole discretion, extend the warranty on the VIPR or the VIPR II beyond such [***] period for [***] per year payable on [***] thereafter.

4.     LICENSES; INTELLECTUAL PROPERTY RIGHTS

        4.1    Grant of Rights from Aurora to Senomyx.     

9


        4.2    Grant of Rights from Senomyx to Aurora.     Senomyx hereby grants to Aurora a fully-paid, non-transferable, except as provided in Section 11.1, non-exclusive, worldwide license, without the right to grant sublicenses, to use the Senomyx Technology solely to perform its obligations under this Agreement. Except as expressly licensed in this Section 4.2, Aurora covenants not to use the Senomyx Compounds or the Senomyx Technology provided by Senomyx either for Internal Research or with Third Parties.

        4.3    Ownership of Intellectual Property.     

10


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5.     PAYMENTS OF ROYALTIES, ACCOUNTING FOR ROYALTIES AND RECORDS

        5.1    Payment and Reporting.     The royalties due under Section 3.4.2 shall be paid within thirty (30) days after the end of each calendar quarter period in which such royalties are earned during the Royalty Term for each Product. With each such quarterly payment, Senomyx shall furnish to Aurora a royalty statement in sufficient detail to permit confirmation of the accuracy of the royalty payment made, which sets forth on a country-by-country basis the relevant sales information, including the total number of units of each such Product sold, Net Sales, the royalties payable in United States dollars, the method used to calculate the royalty, the exchange rate used and other information employed to calculate Net Sales for such Product.

        5.2    Currency of Payment.     All payments to be made under this Agreement, including the royalties payable to Aurora by Senomyx, shall be paid in United States dollars by wire transfer or other mutually acceptable means to a bank account designated by Aurora. With respect to each quarter, for countries other than the United States, whenever conversion of payments form any foreign currency shall be required, such conversion shall be made at the rate of exchange reported in The Wall Street Journal on the last business day of the applicable reporting period.

        5.3    Taxes Withheld.     Any income or other tax that Senomyx or any of its Affiliates, Licensees or Licensees is required by a government agency to withhold and pay on behalf of Aurora with respect to the royalties payable under this Agreement shall be deducted from and offset against such royalties prior to remittance to Aurora; provided, however , that in regard to any tax so deducted, Senomyx shall give or cause to be given to Aurora such assistance as may reasonably be necessary to enable Aurora to claim exemption therefrom or credit therefor, and in each case shall promptly furnish to Aurora proper evidence of the taxes paid on Aurora's behalf.

        5.4    Records.     

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6.     INTELLECTUAL PROPERTY ENFORCEMENT AND DEFENSE OF CLAIMS

        6.1    Intellectual Property Enforcement.     Each party shall have the right, but not the obligation, to bring proceedings against any Third Party for the inappropriate use, including patent infringement, of Patent Rights solely Controlled by it, at its own risk and expense. If either party brings such an action, such party shall be entitled to control such action, hire and retain counsel, make decisions, settle on any terms, and retain any and all awards or damages obtained in any such proceeding. At the request and expense of either party, the other party shall give the requesting party all reasonable assistance required to file and conduct any such proceeding.

        6.2    Defense of Infringement Claims for Aurora Technology.     Senomyx will cooperate with Aurora, at Aurora's expense, in the defense of any suit, action or proceeding against Aurora alleging the infringement of the intellectual property rights of a Third Party by reason of Aurora's use of any Aurora Technology or any Aurora Reporter in performing its obligations under this Agreement. Aurora shall notify Senomyx promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. Senomyx shall give to Aurora full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding, and Senomyx shall execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

        6.3    Defense of Infringement Claims for Products.     Aurora will cooperate with Senomyx, at Senomyx's expense, in the defense of any suit, action or proceeding against Senomyx and Senomyx's Affiliates or Aurora alleging the infringement of the intellectual property rights of a Third Party by reason of the manufacture, use or sale of any Product. Each party shall give the other party prompt written notice of the commencement of any such suit, action, proceeding or claim of infringement. At the request and expense of Senomyx, Aurora shall give Senomyx full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding and Aurora shall execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

7.     TREATMENT OF CONFIDENTIAL INFORMATION; PUBLICITY

        7.1    Confidentiality.     Subject to the terms and conditions of this Agreement, Senomyx and Aurora each agree that, during the Term and for a period of [***] thereafter, it will keep confidential, and will cause its Affiliates to keep confidential, all Confidential Information that is disclosed to it or to any of

13


its Affiliates by the other party. Neither Senomyx nor Aurora nor any of their respective Affiliates shall use the other party's Confidential Information, except as expressly permitted in this Agreement.

14


        7.2    Permitted Use and Disclosures.     Each party may use or disclose Confidential Information disclosed to it by the other party to the extent such information is included in the Aurora Technology, Senomyx Technology or Joint Patent Rights, and to the extent such use or disclosure is reasonably necessary and permitted in the exercise of the rights granted hereunder in filing or prosecuting patent applications, prosecuting or defending litigation, complying with applicable governmental regulations or court orders or otherwise submitting information to tax or other governmental authorities, conducting clinical trials, or making a permitted sublicense or otherwise exercising rights expressly granted to the other party pursuant to the terms of this Agreement; provided, however , that if a party is required to make any such disclosure of the other party's Confidential Information, other than pursuant to a confidentiality agreement, it will give reasonable advance notice of such disclosure to the other party where reasonably possible and, save to the extent inappropriate in the case of patent applications, will use its reasonable efforts to secure confidential treatment of such Confidential Information in consultation with the other party prior to such disclosure (whether through protective orders or otherwise) and disclose only the minimum necessary to comply with such requirements.

        7.3    Use of Data for Promotional Purposes.     Either party may (i) make public statements regarding Products by announcing the achievement of milestones and fees therefor, following consultation with the other party and with the written consent of the other party to the form and content of the public statement, and (ii) without the prior consent of the other party, make public statements regarding the overall success rate(s) achieved by and/or for its customers with the use of Aurora Technology or Senomyx Technology; provided, however , that it may not disclose any chemical structures, screens or the other party's identity.

        7.4    Publication of Results.     Subject to this Article 7, results and data obtained by either party in the course of the collaboration, including, but not limited to, the execution of a Work Plan or an Aurora Screening Program pursuant to this Agreement, may be submitted for publication by Senomyx in accordance with Senomyx's customary practices; provided, however , that Senomyx shall credit Aurora in such publication as the developer and/or provider of the technology that produced, in part, the published results or data. Senomyx shall send a copy of the proposed publication to Aurora at least forty-five (45) days prior to submitting the paper to a publisher and shall allow Aurora thirty (30) days from the date of receipt in which to determine whether such publication contains subject matter for which patent protection should be sought prior to disclosure, or otherwise contains Aurora Confidential Information. Senomyx shall comply with Aurora's request to delete references to Aurora's Confidential Information in any such paper and agrees to withhold publication of the same for an additional one hundred and eighty (180) days to permit Aurora to obtain patent protection, if Aurora deems it necessary, in accordance with the terms of this Agreement. If no answer is received from Aurora within thirty (30) days of receipt of the proposed publication, Senomyx shall be free to submit such proposed publication.

        7.5    Publicity.     Except as required by law and as provided in this Article 7, neither party may make any public announcement or otherwise disclose the terms of this Agreement without the prior written consent of the other party, which consent shall not be unreasonably withheld.

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8.     PATENT PROSECUTION AND MAINTENANCE

        The control and expense of the filing, prosecution (including an opposition or interference) and maintenance of Patent Rights or other intellectual property rights claiming Inventions made solely by a party will be the sole responsibility of the party that made such Invention, and the party not filing the patent application will cooperate in such filing, prosecution and maintenance. Senomyx and Aurora will determine by mutual agreement which party will be responsible for, and will cooperate in, the filing, prosecution and maintenance of Joint Patent Rights and will share equally in the expenses incurred with respect thereto.

9.     WARRANTIES AND INDEMNIFICATION

        9.1    Mutual Representations and Warranties.     Each party hereby makes the following representations and warranties to the other party:

        9.2    Warranties Regarding Senomyx Technology.     Senomyx represents and warrants to Aurora as of the Effective Date the following:

16


        9.3    Senomyx Indemnification.     

        9.4    Warranties Relating to Aurora Technology.     Aurora represents and warrants to Senomyx as of the Effective Date the following:

17


        9.5    Aurora Indemnification.     

10.   TERM AND TERMINATION

        10.1    Term.     The term of this Agreement will begin on the Effective Date and shall continue until there is no longer a royalty obligation owed by Senomyx to Aurora under this Agreement, unless terminated earlier in accordance with the provisions of Section 10.2, 10.3 or 10.4 hereof (the "Term").

        10.2    Termination by Senomyx.     Senomyx may terminate this Agreement without cause at any time upon [***] prior written notice to Aurora which notice may not be provided earlier than [*** ] from the Effective Date.

        10.3    Termination By Mutual Agreement.     Notwithstanding Section 10.2, the parties may terminate this Agreement at any time, in whole or in part, by mutual written agreement executed by both Aurora and Senomyx.

        10.4    Termination for Breach.     Aurora shall have the right to terminate this Agreement at any time if Senomyx fails to make any payment when due under this Agreement, provided that Senomyx has not made such payment within [***] after written notice thereof by Aurora. Either party shall have the right to terminate this Agreement at any time for a material breach of this Agreement (other than non-payment) by the other party, provided that the breaching party has not cured such breach within [***] after written notice thereof by the non-breaching party. The non-breaching party, upon termination of this Agreement, may seek actual or general damages and remedies available to it at law or in equity. NO PUNITIVE OR CONSEQUENTIAL DAMAGES MAY BE SOUGHT BY EITHER PARTY.

        10.5    Effect of Termination.     

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        10.6    Survival.     The obligations and rights of the parties under Sections 2.4.5, 4.3, 5.4, 10.5 and 10.6 and Articles 1, 7, 9 and 11 shall survive termination or expiration of this Agreement.

11.   MISCELLANEOUS

        11.1    Assignment.     Notwithstanding any provision of this Agreement to the contrary, neither party may assign any of its rights or obligations under this Agreement in any country to any Third Party without the prior written consent of the non-assigning party, which consent shall not be unreasonably withheld; provided, however , that either party may assign its rights and obligations under this Agreement without the consent of the other party (i) in connection with the transfer or sale of all or substantially all of its assets, or (ii) to any Affiliate. In the event of such transaction, however, intellectual property rights (including Know-How) of a party to such transaction other than one of the parties to this Agreement, shall not be included in the technology licensed hereunder. Notwithstanding the foregoing, any such assignment to an Affiliate shall not relieve the assigning party of its responsibilities for performance of its obligations under this Agreement. This Agreement shall survive any merger or consolidation of either party with or into another party and no consent for any such merger, consolidation or similar reorganization shall be required hereunder.

        11.2    Binding Effect.     This Agreement shall be binding upon and inure to the benefit of the successors and permitted assigns of the parties. Any assignment not in accordance with this Agreement shall be void.

        11.3    Force Majeure.     Neither party shall lose any rights hereunder or be liable to the other party for damages or losses on account of failure of performance by the defaulting party if the failure is occasioned by war, fire, explosion, flood, El Niño, earthquake, strike, lockout, embargo, act of God, or any other similar cause beyond the control of the defaulting party; provided, however , that the party claiming force majeure has exerted all reasonable efforts to avoid or remedy such force majeure and thereafter takes all reasonable steps to mitigate any such delay in performance hereunder and any damages that may be incurred by the other party thereby.

        11.4    Notices.     Any notices or communications provided for in this Agreement to be made by either party to the other party shall be in writing, in English, and shall be made by prepaid air mail or overnight carrier with return receipt addressed to the other party at its address set forth below. Any

19



such notice or communication may also be given by hand or facsimile to the appropriate designation. Notices shall be sent:

        Either party may by like notice specify or change an address to which notices and communications shall thereafter be sent. Notices sent by mail, facsimile or overnight carrier shall be effective upon receipt and notices given by hand shall be effective when delivered.

        11.5    Governing Law and Jurisdiction.     This Agreement shall be governed by the laws of the State of California, as such laws are applied to contracts entered into and to be performed entirely within such state.

        11.6    Waiver.     Except as specifically provided for herein, the waiver from time to time by either party of any right or the failure to exercise any remedy shall not operate or be construed as a continuing waiver of the same right or remedy or any of the other of such party's rights or remedies provided in this Agreement.

        11.7    Severability.     If any term, covenant or condition of this Agreement or the application thereof to any party or circumstance shall, to any extent, be held to be invalid or unenforceable, then the remainder of this Agreement, or the application of such term, covenant or condition to parties or circumstances other than those as to which it is held invalid or unenforceable, shall not be affected thereby and each term, covenant or condition of this Agreement shall be valid and enforced to the fullest extent permitted by law. The parties covenant and agree to renegotiate any such term, covenant or condition or the application thereof in good faith in order to provide a reasonably acceptable alternative to the term, covenant or condition of this Agreement or the application thereof that is invalid or unenforceable, it being the intent of the parties that the basic purposes of this Agreement are to be effectuated.

        11.8    Independent Contractors.     It is expressly agreed that Aurora and Senomyx shall be independent contractors and that the relationship between the parties shall not constitute a partnership or agency of any kind. Neither Aurora nor Senomyx shall have the authority to make any statements, representations or commitments of any kind, or to take any action, which shall be binding on the other party, without the prior written authorization of the other party to do so.

        11.9    Counterparts.     This Agreement may be executed in two (2) or more counterparts, each of which shall be deemed an original, but all of which together shall constitute one and the same instrument.

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        11.10    Entire Agreement; Amendment.     This Agreement sets forth all of the covenants, promises, agreements, warranties, representations, conditions and understandings between the parties, and supersedes and terminates all prior agreements and understandings between the parties, with respect to the subject matter hereof. There are no covenants, promises, agreements, warranties, representations, conditions or understandings, either oral or written, between the parties other than as set forth herein. No subsequent alteration, amendment, change or addition to this Agreement shall be binding upon the parties unless reduced to writing and signed by the respective authorized officers of the parties. This Agreement shall not be strictly construed against either party. Any conflict between the terms set forth in the text of this Agreement and the terms of any Exhibit hereto shall be resolved in favor of the text of this Agreement.

        11.11    No Third Party Beneficiaries.     No Third Party, including any employee of any party to this Agreement (except as specifically provided in Sections 9.3 and 9.5), shall have or acquire any rights by reason of this Agreement. Nothing contained in this Agreement shall be deemed to constitute the parties partners with each other or any Third Party.

        11.12    Construction.     The term "Article" or "Section" can refer to any single paragraph level found herein or any collection of multiple paragraphs thereunder.

        11.13    Dispute Resolution.     The parties recognize that disputes as to certain matters may from time to time arise during the Term, which relate to either party's rights and/or obligations hereunder. It is the objective of the parties to establish procedures to facilitate the resolution of disputes arising under this Agreement in an expedient manner by mutual cooperation and without resort to arbitration. The parties agree that prior to any arbitration concerning this Agreement, Senomyx's [*** ] and Aurora's [***] will meet in person or by video-conferencing in a good faith effort to resolve any disputes concerning this Agreement. Within thirty (30) days of a formal request by either party to the other party, either party may, by written notice to the other party, have such dispute referred to their respective officers designated or their successors, for attempted resolution by good faith negotiations, such good faith negotiations to begin within thirty (30) days after such notice is received. Any dispute arising out of or relating to this Agreement which is not resolved between the parties or the designated officers of the parties pursuant to this Section 11.13 shall be resolved by final and binding arbitration conducted in San Diego, California (unless the parties mutually agree to another location) in accordance with Sections 1282 through 1288 of the California Code of Civil Procedure. The arbitration shall be conducted by three (3) arbitrators who are knowledgeable in the subject matter which is at issue in the dispute. One (1) arbitrator will be selected by Senomyx and one (1) arbitrator will be selected by Aurora. The third arbitrator will be selected by mutual agreement of the two (2) arbitrators selected by the parties. In conducting the arbitration, the arbitrators shall (i) determine what discovery will be permitted, consistent with the goal of limiting the cost and time which the parties must expend for discovery (and provided that the arbitrators shall permit such discovery they deem necessary to permit an equitable resolution of the dispute), (ii) ensure that the total time of the arbitration from filing to a final decision or executed settlement agreement is less than six (6) months, and (iii) be able to decree any and all relief of an equitable nature, including, but not limited to, such relief as a temporary restraining order, a preliminary injunction, a permanent injunction, specific performance or repletion of property. The arbitrators shall also be able to award actual or general damages, but shall not award any other form of damage (e.g., consequential, punitive or exemplary damages). The parties shall share equally the arbitrator's fees and expenses pending the resolution of the arbitration, unless the arbitrators, pursuant to their right, but not their obligations, require the non-prevailing party to bear all or any portion of the costs of the prevailing party. The decision of the arbitrators shall be final and binding on the parties and may be sued on or enforced by the party in whose favor it runs in any court of competent jurisdiction at the option of such party. Notwithstanding anything to the contrary in this Section 11.13, either party may seek immediate injunctive or other interim relief from any court of competent jurisdiction with respect to any breach of Articles 4 or 7 hereof, or otherwise to enforce and

21



protect the Patent Rights, copyrights, trademarks, or other intellectual property rights Controlled by such party. In addition, arbitration shall not be used to resolve disputes concerning Patent Rights. Disputes concerning Patent Rights, including, but not limited to, disputes concerning patent ownership, claim language, claim scope and issues of validity shall be settled in a court of law. Any arbitration ruling that relies on an interpretation of Patent Rights shall have no binding effect in a court of law on any Patent Rights related to this Agreement, unless such Patent Rights have been adjudicated in a court of law. In no event shall a demand for arbitration be made after the date when the institution of a legal or equitable proceeding based on such claim, dispute or other matter in question would be barred by the applicable statute of limitations.

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        IN WITNESS WHEREOF, the parties have caused this Agreement to be executed by their duly authorized representatives as of the Effective Date.

SENOMYX, INC.   AURORA BIOSCIENCES CORPORATION

By:

 

/s/  
PAUL A. GRAYSON       

 

By:

 

/s/  
STUART J. M. COLLINSON       
Name:   Paul A. Grayson   Name:   Stuart J. M. Collinson
Title:   President and CEO   Title:   Chairman, CEO and President

Date:

 

November 1, 2000


 

Date:

 

November 1, 2000

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LIST OF EXHIBITS

Exhibit 1:   List of Aurora Patent Rights

Exhibit 2:

 

List of Senomyx Patent Rights

Exhibit 3:

 

Description of Reporters

Exhibit 4:

 

Stock Purchase Agreement

Exhibit 5:

 

Senomyx Target List

Exhibit 6:

 

Assay Platform Validation Criteria

Exhibit 7:

 

VIPR and VIPR II Performance Criteria and Service and Support

24


EXHIBIT 1

List of Aurora Patent Rights

TITLE
[***]
  SERIAL NUMBER OR PATENT NUMBER
[***]

25


EXHIBIT 2

List of Senomyx Patent Rights

TITLE
[***]
  APPLICATION NO.
[***]

26


EXHIBIT 3

Description of Reporters

1)
[***]

2)
[***]

3)
[***]

4)
[***]

5)
The following [***] appropriate for evaluation of Senomyx targets
[***]

27


EXHIBIT 5

Senomyx Target List

        Sequences listed as an attachment to this Exhibit, and incorporated by reference, include the following molecules:

         [***]

28


EXHIBIT 6

Assay Platform Validation Criteria

        Assay Platform validation shall include the following characteristics:

         [***]

29


EXHIBIT 7

Performance Specifications

Voltage Ion Probe Reader (VIPR)

        The VIPR is a 96-well compatible instrument designed to run voltage sensitive fluorescence assays on ion channel targets.

        The VIPR will be capable of dispensing reagent during a read of a ratiometric fluorescence signal from eight (8) wells at one time; provided, however , that mixing will not be instantaneous.

        The VIPR's optical properties will be such that it is compatible with the current dyes developed by Aurora and will have sufficient sensitivity to see at least 20 mV changes in membrane potential.

Voltage Ion Probe Reader II (VIPR II)

        The VIPR II is a 96-well and 384-well microplate compatible instrument designed to run voltage sensitive fluorescence assays on ion channel targets.

        The VIPR II will be capable of simultaneous liquid addition and optical detection for 96-well and 384-well plate formats.

        The VIPR II will be capable of dispensing liquids into a 96-well or 384-well microplate using 8 or 32 tips without changing the dispense head.

        The VIPR II will be capable of simultaneous optical measurements at two wavelengths at 1 Hz and up to100 Hz for the 96-well and 384-well plate format, respectively.

Service and Support for VIPR or VIPR II

        Service and support by Aurora for the VIPR or VIPR II includes the following: (i) customary [***] ; (ii)  [***] by an Aurora Factory Certified Engineer; and (iii)  [***] , exclusive of [***] , which are separate, prepaid and added to the service invoice after any visit or repair. Reasonable travel and related expenses for [***] shall be paid by [***] . Only a Aurora Factory Certified Engineer is authorized to service the VIPR or VIPR II, and any tampering with or modification of the instrument by any other party without the express written consent of Aurora will nullify the service and support coverage for the VIPR or VIPR II.

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CONFIDENTIAL
***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.


FIRST AMENDMENT
TO THE
COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

        THIS FIRST AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT (the "First Amendment") is made by and between SENOMYX, INC. ("Senomyx"), a Delaware corporation, having a principal place of business at 11099 North Torrey Pines Road, La Jolla, California 92037, and AURORA BIOSCIENCES CORPORATION ("Aurora"), a Delaware corporation, having a principal place of business at 11010 Torreyana Road, San Diego, California 92121.

        WHEREAS, Senomyx and Aurora entered into that certain Collaborative Research and License Agreement dated as of November 1, 2000 (the "Agreement") to collaborate in the development of assays and screening systems to identify and develop small molecules for use in consumer products and therapeutics (capitalized terms used but not otherwise defined in this First Amendment shall have the meanings given such terms in the Agreement); and

        WHEREAS, Senomyx and Aurora wish to amend the Agreement in the manner set forth in this First Amendment and otherwise to provide for certain agreements by the parties as set forth herein.

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree to amend the Agreement as follows:

1.
The definitions of "Collaborative Period", "Field II" and "Target" in Article 1 of the Agreement are hereby amended and restated its entirety as follows:


"Collaborative Period" means the period beginning on the Effective Date and ending on October 31, 2002, unless terminated earlier in accordance with Section 10.3 or 10.4.


"Field II" means [***] .


"Target" means a target identified in taste, olfaction or pheromone detection.

2.
The definition of "Therapeutic Target" is hereby added to Article 1 of the Agreement as follows:


"Therapeutic Target" means a Target listed on Exhibit 5, as modified from time to time by the Steering Committee as provided under Section 2.2.

3.
The first sentence in Section 3.1 of the Agreement is hereby amended and restated in its entirety as follows:


"During the first fifteen (15) months of the Collaborative Period, Senomyx will pay Aurora for [***] FTEs at an annual rate of [***] per FTE. During the remaining nine (9) months of the Collaborative Period, Senomyx will pay Aurora for [***] FTEs at an annual rate of [***] per FTE."

4.
Section 3.2 of the Agreement is hereby deleted in its entirety. The numbering of all other sections within Article 3 will remain unchanged.

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5.
The last sentence in Section 3.8 of the Agreement is hereby amended and restated in its entirety as follows:


"Senomyx may, in its sole discretion, extend the warranty on the VIPR or the VIPR II beyond such [***] period for [***] per year payable on [***] thereafter; provided, however , such right to extend the warranty shall expire on the [***] of the Effective Date."

6.
Section 4.1.1 of the Agreement is hereby amended and restated in its entirety as follows:


"4.1.1     Non-Exclusive License to use Aurora Technology in Assay Platforms.     Subject to the terms and conditions of this Agreement, Aurora hereby grants to Senomyx a non-transferable, except as provided in Section 11.1, non-exclusive, worldwide license, without the right to grant sublicenses, under the Aurora Technology to use the Assay Platforms solely to conduct Internal Research:

    (a)
    to develop screens for the Therapeutic Targets and to screen the Therapeutic Targets (i) to identify, discover and profile compounds in Field I, and (ii) to make, have made, use, sell, offer for sale and import compounds or Products in Field I identified or discovered with activity against such Therapeutic Targets in the Assay Platforms; and

    (b)
    to develop screens for the Targets and to screen the Targets (i) to identify, discover and profile compounds in Field II, and (ii) to make, have made, use, sell, offer for sale and import compounds or Products in Field II identified or discovered with activity against such Targets in the Assay Platforms."

7.
Section 4.1.3 of the Agreement is hereby amended and restated in its entirety as follows:


"4.1.3     Non-Exclusive License to use Aurora Reporters for Internal Research of Therapeutic Targets.     Subject to the terms and conditions of this Agreement, Aurora hereby grants to Senomyx a non-transferable, except as provided in Section 11.1, non-exclusive, worldwide license, without the right to grant sublicenses, under the Aurora Technology to use the Aurora Reporters solely to conduct Internal Research on the Therapeutic Targets (i) to identify, discover and profile compounds in Field I, and (ii) to make, have made, use, sell, offer for sale and import compounds or Products in Field I identified or discovered with activity against such Therapeutic Targets."

8.
Section 10.1 of the Agreement is hereby amended and restated in its entirety as follows:


"10.1     Term.     The term of this Agreement will begin on the Effective Date and will continue until October 31, 2002, unless terminated earlier in accordance with the provisions of Section 10.3 or 10.4 hereof (the "Term")."

9.
Section 10.2 is hereby deleted in its entirety. The numbering of all other sections within Article 10 will remain unchanged.

10.
Section 10.5.1 of the Agreement is hereby amended and restated in its entirety as follows:


"10.5.1    Senomyx will pay to Aurora a non-creditable, non-refundable termination fee of [***] on or before October 30, 2002."

11.
Section 10.6 of the Agreement is hereby amended and restated in its entirety as follows:


"10.6     Survival.     The obligations and rights of the parties under Sections 2.4.5, 2.5, 3.4, 3.8, 4.1.7, 4.3, 10.4, 10.5 and 10.6 and Articles 1, 5, 7, 9 and 11 will survive the termination or expiration of this Agreement. In addition, upon the expiration of this Agreement in accordance with Section 10.1, the rights granted to Senomyx under Section 4.1 shall remain in full force and effect as long as Senomyx is not in material breach of its obligations to Aurora under this Agreement."

12.
In consideration for the [***] assay that Aurora has delivered to Senomyx, Senomyx will pay to Aurora a non-creditable, non-refundable milestone payment of [***] on or before April 30, 2002.

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13.
Senomyx will pay to Aurora the annual research support payment due February 1, 2002 under Section 3.1 on or before April 30, 2002.

14.
Except as specifically amended by this First Amendment, the terms and conditions of the Agreement shall remain in full force and effect.

15.
This First Amendment shall be governed by the laws of the State of California, as such laws are applied to contracts entered into and to be performed entirely within such state.

16.
This First Amendment may be executed in two or more counterparts, each of which shall be deemed an original, but all of which together shall constitute one and the same instrument.

        IN WITNESS WHEREOF, the parties have executed this First Amendment effective as of April 16, 2002.

SENOMYX, INC.   AURORA BIOSCIENCES CORPORATION
     
     
/s/   PAUL A. GRAYSON       
Paul A. Grayson
Chairman and CEO
  /s/   HARRY STYLLI       
Harry Stylli
President

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COLLABORATIVE RESEARCH AND LICENSE AGREEMENT BETWEEN SENOMYX, INC. AND AURORA BIOSCIENCES CORPORATION
FIRST AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

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Exhibit 10.13

***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.


COLLABORATIVE RESEARCH
AND LICENSE AGREEMENT

BETWEEN

SENOMYX, INC.

AND

KRAFT FOODS, INC.

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COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

        THIS AGREEMENT is entered into as of the Effective Date by and between SENOMYX, INC., a Delaware Corporation having offices at 11099 North Torrey Pines Road, La Jolla, CA 92037 ("Senomyx") and KRAFT FOODS, INC., a Delaware Corporation having offices at 801 Waukegan Road, Glenview, IL 60025 ("Kraft").

BACKGROUND

        Senomyx conducts research in the field of chemosensation, an objective of which is to study potential biological targets and develop assays for use in the discovery and commercialization of products in taste and olfaction. Kraft is in the business of developing, manufacturing and marketing consumer food products. Senomyx and Kraft desire to collaborate in a research program to: (i) discover compounds that [***] for use in [***] ; and (ii) discover compounds that [***] for use in [***] products.

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree as follows:

THE AGREEMENT

1.     Definitions.     Certain terms set forth in this Agreement with initial capitals are defined in Appendix A, which is incorporated herein by reference.

2.     Steering Committee.     No later than ten days after the Effective Date, the parties will establish a joint steering committee (the "Steering Committee"). The Steering Committee will manage the Collaborative Program and will (i) provide strategic direction and performance criteria for the Collaborative Program; (ii) monitor progress and communicate status of the Collaborative Program; (iii) facilitate the cooperation of the parties under the Collaborative Program; and (iv) confirm completion of milestones under the Collaborative Program. The Steering Committee will consist of two representatives designated by Senomyx and two representatives designated by Kraft. Each member of the Steering Committee will have one vote. The Steering Committee will meet no later than thirty days after the Effective Date and at least four times per year during the Collaborative Period using mutually agreed upon meeting locations and formats including tele-conferencing and video-conferencing. On an alternating basis, one party will promptly prepare and deliver to the members of the Steering Committee minutes of such meetings for review and approval of both parties. Decisions in the Steering Committee will be made by unanimous vote, at a meeting where all four voting representatives are present. All unresolved disputes will be settled in accordance with Section 18.4, or as otherwise mutually agreed upon in writing.

3.     Collaborative Program.     The parties will collaborate in the conduct of the Collaborative Program in accordance with the Research Plan during the Collaborative Period. The Collaborative Program will consist of two phases: the [***] Phase and the [***] Phase, which may overlap.

        3.1    [***] Phase.     

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        3.2    [***] Phase.     

        3.3    Product Development and Commercialization.     

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4.     Principal Scientists.     The principal scientists who will direct the respective research and development responsibilities of each party will be designated in writing by the Parties at the first meeting of the Steering Committee.

5.     Collaboration with an Affiliate or Third Party.     During the Term, Senomyx will have the right to enter into the Collaborative Program with its Affiliates or with Third Parties including Collaborative Programs to discover compounds that [***] Tastants and [***] Tastants for use outside the applicable Field.

6.     Law and Regulation.     The Compounds, Selected Compounds and Materials provided by one party to the other under this Agreement must be used in compliance with all applicable laws and regulations. Senomyx and Kraft each certifies that it conducts tests in vitro or other tests that are only used for laboratory research purposes and that all Materials and chemicals that either party receives from the other under this Agreement will actually be used for these purposes only.

7.     Scientific and Management Authority.     Scientific and management authority and responsibility for activities conducted under the Research Plan and Product Development and Commercialization will be governed by the Steering Committee; provided, however, that after the Collaborative Period, the parties will agree in writing to appoint a new committee to manage the activities under this Agreement.

8.     Reporting.     Each party will report to the other a written summary of results of research and development work it carries out, if any, within [***] . Each party agrees to prepare and exchange written and electronic reports concerning any results and data that must be used by either party as supporting information for any regulatory filings. The exchange of such report may be reasonably supplemented, at the request of the party receiving a report, by correspondence and/or upon reasonable prior notice, visits to the other party's facilities.

9.     Financial Terms.     

        9.1    Annual Research Support.     Each year during the Collaborative Period Kraft will pay Senomyx $1,375,000 (which represents the full time equivalent of [***] Senomyx scientists at an annual rate of [***] per scientist based on [***] per year), such rate to be increased for inflation using the Aon Consulting/Radford Division report for industry compensation each year; provided, however, that if in any calendar year the annual amount to be paid to Senomyx exceeds $1,375,000, Kraft may elect, in its sole discretion, to decrease the number of full time equivalents such that the annual amount to be paid to Senomyx remains at $1,375,000. These payments will be made in advance and, at a minimum, on an equal quarterly basis. The first payment will be made within [***] following the Effective Date. These payments are inclusive of overhead, labor, and supplies. These payments do not include (i) Kraft's costs associated with providing [***] Tastants and [***] Tastants; (ii) the costs of any unanticipated materials as requested and agreed to by the parties; or (iii) the costs of high throughput screening over [***] . Additional funding, if any, will be proposed to the Steering Committee and agreed to in writing by the parties.

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        9.2    Milestone Payments.     Kraft will pay Senomyx the following non-creditable, non-refundable milestone payments within [***] of notification of the following milestone events:

        9.3    Royalty for [***] Products.     Kraft will pay to Senomyx the following earned royalties during the Royalty Term:

        9.4    Royalty for [***] Products.     Kraft will pay to Senomyx the following earned royalties during the Royalty Term:

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        9.5    Manufacturing and Capital Credits.     Kraft may in its sole discretion, manufacture or enter into supply and manufacturing agreements with a mutually agreed upon Third Party regarding Selected Compounds; provided however, Senomyx will have the first right of negotiation and refusal to manufacture any such Selected Compounds, subject to provisions of cost, quality and quantity. If Kraft or a Third Party manufactures a Product(s) [***] .

        9.6    Payment Method.     The royalties due under Section 9 will be paid within thirty days after the end of each calendar quarter period in which such royalties are earned during the Royalty Term for each Product. With each such quarterly payment, Kraft will furnish to Senomyx a royalty statement in sufficient detail to permit confirmation of the accuracy of the royalty payment made, which sets forth on a country-by-country basis the relevant sales information, including the total number of units of each such Product sold, Net Sales, the royalties payable in United States dollars, the method used to calculate the royalty, the exchange rate used and other information employed to calculate Net Sales for such Product.

        9.7    Currency of Payment.     All payments to be made under this Agreement, including the royalties payable to Senomyx by Kraft, will be paid in United States dollars by wire transfer or other mutually acceptable means to a bank account designated by Senomyx. With respect to each quarter, for countries other than the United States, whenever conversion of payments from any foreign currency are required, such conversion will be made at the rate of exchange reported in The Wall Street Journal on the business day of the applicable reporting period. Translation of sales recorded in local currencies to United States dollars will be performed in a manner consistent with Kraft's normal practices used to prepare its audited financial statements for internal and external reporting purposes, which uses a widely accepted published exchange rate.

        9.8    Taxes Withheld.     Any income or other tax that Kraft, or any of its Affiliates is required by a government agency to withhold and pay on behalf of Senomyx with respect to the royalties payable under this Agreement will be deducted from and offset against such royalties prior to remittance to Senomyx; provided, however, that in regard to any tax so deducted, Kraft will give or cause to be given to Senomyx such assistance as may reasonably be necessary to enable Senomyx to claim exemption from or credit for the tax so deducted, and in each case will promptly furnish to Senomyx proper evidence of the taxes paid on Senomyx's behalf.

        9.9    Late Payment.     In the event that any payment, including royalty payments, due hereunder is not made when due, the payment will accrue interest from that date due at the rate of [***] ; provided, however, that in no event will such rate exceed the maximum legal annual interest rate. The payment of such interest will not limit Senomyx from exercising any other rights it may have as a consequence of the lateness of any payment.

        9.10    Records of Net Sales and Royalty Calculations.     During the Royalty Term and for a period of three years thereafter, Kraft will keep complete and accurate records of sales and all other information necessary to calculate Net Sales of each Product in sufficient detail to allow the accrued royalties to be determined accurately in accordance with United States generally accepted accounting principles. Senomyx, with reasonable written notice to Kraft, will have the right to cause Senomyx's nationally recognized independent, certified public accountant to audit such records at the place or places of business where such records are customarily kept in order to verify the accuracy of the reports of Net Sales and royalty payments. Such accountant must execute a confidentiality agreement prior to entering Kraft's premises, obligating such accountant to keep all information disclosed to it confidential and will only be permitted to disclose to Senomyx the extent of any discrepancy between royalty payments made by Kraft under this Agreement and the actual royalty required to be so paid. Senomyx will bear the full cost of such audit unless such audit discloses a variance of more than [***] from the amount of the royalties due under this Agreement, in which event, Kraft will bear the full cost of such audit. In all events, Kraft will pay any underpayment with interest in accordance with

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Section 9.9. Senomyx agrees not to disclose Confidential Information concerning royalty payments reports, and all other information learned in the course of an audit or inspection, except to the extent necessary for Senomyx to enforce its rights under this Agreement or if disclosure is required by law.

10.     Grants.     Subject to the terms and conditions of this Agreement, Senomyx hereby grants to Kraft the following rights:

        10.1    Grant of Rights regarding [***] Compounds and [***] Products:     

        10.2    Grant of Rights regarding [***] Compounds and [***] Products:     

        10.3    Right to Negotiate License for New Products.     At any time, Kraft will have the right to negotiate an exclusive, nontransferable, worldwide, royalty-bearing license under the Senomyx's Patents and Know-How to make, have made, use, sell, have sold, import and export New Products. The parties will negotiate language in good faith for such license including the royalties on such New Products.

        10.4    Limitations to Licenses.     Kraft may not sublicense its rights under Section 10 to Third Parties, except for the purpose of entering into collaborative development agreements between any such Third Party and Kraft that provide the support, as is appropriate at the time, for research, development or commercialization of Product, and as agreed to by Senomyx in writing. All rights granted by Senomyx to Kraft under Section 10 shall be subject to the timely payment by Kraft under Section 9 of the Agreement.

        10.5    Grant of Rights from Kraft to Senomyx.     For the sole purpose of conducting research under this Agreement, Kraft hereby grants to Senomyx a fully paid, non-exclusive, worldwide, fully-transferable license, to use the Kraft Technology pursuant to the Research Plan, with the right to grant sublicenses; provided, however, that any such sublicense shall be subject to the prior written approval of Kraft, which shall not be unreasonably withheld.

        10.6     Notwithstanding the provisions contained within this Agreement, Kraft may, at any time, negotiate a license for the use of Selected [***] Compounds outside the Field. However, the parties understand that any such license will be subject to Third Party agreements entered into by Senomyx and the final decision to enter into such license shall be made by Senomyx, in its sole discretion.

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11.   Ownership of Intellectual Property.

        11.1    Transfer of Rights.     Senomyx retains all rights not expressly licensed or assigned in this Agreement. Except as otherwise expressly provided in this Agreement, nothing in this Agreement is intended to convey or transfer ownership or the grant of any license or sublicense by one party to the other party of any rights in any Confidential Information, Patent Rights or Know-How Controlled by a party. Except as expressly set forth in this Agreement, nothing in this Agreement will be construed to grant manufacturing rights.

        11.2    Senomyx Inventions.     Senomyx will own all Inventions and other Know-How made solely by its employees and agents and all Patent Rights claiming such Inventions and other Know-How. Senomyx hereby irrevocably assigns to Kraft all interest in and to any such Inventions and other Know-How that consist of improvements to Kraft Technology, subject to the licenses granted to Senomyx under Section 10. The parties will look to the definition of Kraft Technology in order to determine whether any such Invention and Know-How is an improvement to Kraft Technology. In the event that Senomyx is legally unable to assign such rights to Kraft, then Senomyx agrees either to waive the enforcement of such rights against Kraft and any sublicensees and assignees, or to grant Kraft an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        11.3    Kraft Inventions.     Kraft will own all Inventions and other Know-How made solely by its employees and agents, and all Patent Rights claiming such Inventions and other Know-How. Kraft hereby irrevocably assigns to Senomyx all interest in and to any such Inventions and other Know-How that consist of improvements to Senomyx Technology, Compounds, or Selected Compounds, subject to the licenses granted to Kraft under Section 10. The parties will look to the definition of Senomyx Technology in order to determine whether any such Invention and Know-How is an improvement to Senomyx Technology. In the event that Kraft is legally unable to assign such rights to Senomyx, then Kraft agrees either to waive the enforcement of such rights against Senomyx and any sublicensees and assignees, or to grant Senomyx an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        11.4    Joint Inventions.     All Inventions conceived jointly by employees or agents of Senomyx and employees or agents of Kraft (the "Joint Inventions") and all Joint Patent Rights will be owned jointly by Kraft and Senomyx. Kraft hereby irrevocably assigns to Senomyx all interest in and to any Joint Inventions that consist of improvement to Senomyx Technology, Compounds, or Selected Compounds and uses thereof, and all Joint Patent Rights claiming such Joint Inventions, subject to the licenses granted to Kraft under Section 10. Senomyx hereby irrevocably assigns to Kraft all interest in and to any such Inventions and other Know-How that consist of improvements to Kraft Technology, subject to the licenses granted to Senomyx under Section 10. In the event that Kraft is legally unable to assign such rights to Senomyx, then Kraft agrees either to waive the enforcement of such rights against Senomyx and any sublicensees and assignees, or to grant Senomyx an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights. In the event that Senomyx is legally unable to assign such rights to Kraft, then Senomyx agrees either to waive the enforcement of such rights against Kraft and any sublicensees and assignees, or to grant Kraft an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        11.5    Other Inventions.     Any Inventions not included in Sections 11.1, 11.2, 11.3, or 11.4 will be owned by their inventors.

        11.6    Inventorship and Assignment.     United States patent law will determine inventorship of patentable inventions. Senomyx and Kraft agree to execute all documentation necessary to perfect all assignments of Inventions, Know-How and Patent Rights contemplated in this Agreement.

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        11.7    Markings.     At least [***] prior to commercialization of the first Product, Kraft will consider whether Kraft will mark any Product with a Senomyx trademark or Senomyx patent. However, the parties understand that Kraft will make the final decision in Kraft's sole discretion.

12.   Treatment of Confidential Information; Publicity.

        12.1    Confidentiality.     Subject to the terms and conditions of this Agreement, Senomyx and Kraft each agree that, during the Term and for a period of [***] thereafter, it will keep confidential, and will cause its Affiliates to keep confidential, all Confidential Information that is disclosed to it or to any of its Affiliates by the other party. Neither Senomyx nor Kraft nor any of their respective Affiliates will use the other party's Confidential Information except as expressly permitted in this Agreement.

        12.2    Disclosure to Related Parties.     Senomyx and Kraft each agree that any disclosure of the other party's Confidential Information to any officer, employee, contractor, consultant, sublicensee or agent of the other party or to any of its Affiliates will be made only if and to the extent necessary to carry out its responsibilities under this Agreement and to exercise the rights granted to it hereunder, will be limited to the extent consistent with such responsibilities and rights, and will be provided only to such persons or entities who are under an obligation of confidentiality no less stringent than as set forth in this Agreement. Each party will use reasonable efforts to take such action, and to cause its Affiliates to take such action, to preserve the confidentiality of each other's Confidential Information, which will be the same efforts as it would customarily take to preserve the confidentiality of its own Confidential Information.

        12.3    Return of Confidential Material Upon Termination.     Upon termination of this Agreement, each party, upon the other party's request, will return or destroy all Confidential Information received from the other party pursuant to this Agreement, including all copies and extracts of documents, within thirty days of the request of the other party; provided, however, one copy of the Confidential Information may be retained for legal purposes.

        12.4    Exceptions to Confidential Information.     Confidential Information will not include any information, which the receiving party can prove by competent written evidence:

        A party may also disclose Confidential Information of the other party where required to do so by law or legal process; provided, however, that, in such event, the party required to disclose such information must give advance written notice of such disclosure to the other party and must cooperate with the other party's efforts to seek, at the request and expense of the other party, all confidential treatment and protection for such disclosure as is permitted by applicable law.

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        12.5    Confidential Financial Information.     The parties agree that the material financial terms of this Agreement will be considered Confidential Information of both parties. Notwithstanding the foregoing, either party may disclose such terms in legal proceedings or as are required to be disclosed in its financial statements, by law, or under an obligation of confidentiality to bona fide potential sublicensees. Either party will have the further right to disclose the material financial terms of this Agreement under an obligation of confidentiality to any potential acquirer, merger partner, bank, venture capital firm, or other financial institution to obtain financing. Notwithstanding the foregoing, the parties will mutually agree upon a press release consistent, in form and content, with the draft press release attached as Appendix E. Thereafter, Kraft and Senomyx may each disclose to Third Parties the information contained in such press release without the need for further approval by the other party.

        12.6    Confidential Research Information.     Each party agrees that all results and data generated from the research under the Collaborative Program will be owned exclusively by the generating party and considered Confidential Information of the generating party subject to the confidentiality requirements of Section 12. Neither Kraft nor Senomyx will provide to a Third Party any Materials provided by the other party.

        12.7    Permitted Use and Disclosures.     Each party may use or disclose Confidential Information disclosed to it by the other party to the extent such information is included in the Kraft Technology, Senomyx Technology or Joint Patent Rights, and to the extent such use or disclosure is reasonably necessary and permitted in the exercise of the rights granted hereunder in filing or prosecuting patent applications, prosecuting or defending litigation, complying with applicable governmental regulations, or court orders or otherwise submitting information to tax or other governmental authorities, conducting clinical trials, submitting information for food additive approval applications, or making a permitted sublicense or otherwise exercising rights expressly granted to the other party pursuant to the terms of this Agreement; provided, however, that if a party is required to make any such disclosure of the other party's Confidential Information, other than pursuant to a confidentiality agreement, it will give reasonable advance notice of such disclosure to the other party where reasonably possible and, save to the extent inappropriate in the case of patent applications, will use its reasonable efforts to secure confidential treatment of such Confidential Information in consultation with the other party prior to such disclosure (whether through protective orders or otherwise) and disclose only the minimum necessary to comply with such requirements.

        12.8    Use of Data for Promotional Purposes.     Either party may (i) make public statements regarding Compounds, Selected Compounds or Products, following consultation with the other party and with the written consent of the other party to the form and content of the public statement. Such public statement shall be consistent with the press release attached as Appendix E.

        12.9    Publication of Results.     Subject to this Section 12, results and data obtained by either party in the course of the collaboration may be submitted for publication by Senomyx in accordance with Senomyx's customary practices. Senomyx will send a copy of the proposed publication to Kraft and will allow Kraft [***] from the date of receipt in which to determine whether such publication contains subject matter for which patent protection should be sought prior to disclosure, or otherwise contains Kraft Confidential Information. If no answer is received from Kraft within [***] of receipt of the proposed publication, Senomyx will be free to submit such proposed publication.

        12.10    Publicity.     Except as required by law and as provided in this Section 12, neither party may make any public announcement or otherwise disclose the terms of this Agreement without the prior written consent of the other party, which consent will not be unreasonably withheld.

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13.   Intellectual Property Enforcement and Defense of Claims.

        13.1    Intellectual Property Enforcement.     Subject to the Third Party obligations of Senomyx, each party will have the right, but not the obligation, to bring proceedings against any Third Party for the inappropriate use, including patent infringement, of Patent Rights solely Controlled by it, at its own risk and expense. If either party brings such an action, such party will be entitled to control such action, hire and retain counsel, make decisions, settle on any terms, and retain any and all awards or damages obtained in any such proceeding. At the request and expense of either party, the other party will give the requesting party all reasonable assistance required to file and conduct any such proceeding.

        13.2    Defense of Infringement Claims for Senomyx Technology.     Kraft will cooperate with Senomyx, at Senomyx's expense, in the defense of any suit, action or proceeding against Kraft or Senomyx or Senomyx's Affiliates alleging the infringement of the intellectual property rights of a Third Party by reason of Kraft's or Senomyx's use of any Senomyx Technology licensed to Kraft under this Agreement. The parties must notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. At the expense of Senomyx, Kraft will give to Senomyx full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding and Kraft will execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

        13.3    Defense of Infringement Claims for Kraft Technology.     Senomyx will cooperate with Kraft, at Kraft's expense, in the defense of any suit, action or proceeding against Senomyx or Kraft or Kraft's affiliates alleging the infringement of the intellectual property rights of a Third Party by reason of Kraft's or Senomyx's use of any Kraft Technology licensed to Senomyx under this Agreement. The parties must notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. At the expense of Kraft, Senomyx will give to Kraft full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding and Senomyx will execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

        14.    Patent Prosecution and Maintenance.     The control and expense of the filing, prosecution (including an opposition or interference) and maintenance of Patent Rights or other intellectual property rights claiming Inventions made solely by a party will be the sole responsibility of the party that made such Invention, and the party not filing the patent application will cooperate in such filing, prosecution and maintenance. Senomyx and Kraft will determine by mutual agreement which party will be responsible for, and will cooperate in, the filing, prosecution and maintenance of Joint Patent Rights and will share equally in the expenses incurred with respect thereto.

15.   Term and Termination.

        15.1    Term.     The term of this Agreement will begin on the Effective Date and will continue through the end of the Royalty Term, unless terminated earlier in accordance with the provisions of Section 15.2, 15.3 or 15.4 hereof (the "Term").

        15.2    Termination by Kraft.     Kraft will have the right to terminate this Agreement without cause at any time upon sixty days written notice, provided, however, if such termination occurs prior to the end of the Collaborative Period Kraft must provide research funding in accordance with Section 9.1 for a period of [***] from the date of written notice of termination.

        15.3    Termination By Mutual Agreement.     The parties may terminate this Agreement at any time, in whole or in part, by mutual written agreement executed by both parties.

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        15.4    Termination for Breach.     Either party has the right to terminate this Agreement at any time for a material breach of this Agreement by the other party, provided that the breaching party has not cured such breach within sixty days after written notice thereof by the non-breaching party. The non-breaching party, upon termination of this Agreement, may seek actual or general damages and remedies available to it at law or in equity. NEITHER PARTY WILL SEEK PUNITIVE OR CONSEQUENTIAL DAMAGES.

16.   Effect of Termination.

        16.1     Upon termination of this Agreement pursuant to Section 15, Kraft will have no right to practice within or use of the Senomyx Technology, and all rights, title and interest in and to the Senomyx Technology will revert to and become the sole property of Senomyx, unless otherwise agreed upon in writing by the parties on or before the effective date of such termination.

        16.2     Expiration or termination of this Agreement will not relieve the parties of any obligation accruing prior to such expiration or termination.

        16.2    Survival.     The obligations and rights of the parties under Sections 9.10, 11.2 through 11.7, 12, 16, 17.2(B), 17.3, 17.4(B), 17.5, 18, and Appendix A, will survive termination or expiration of this Agreement.

17.   Warranties and Indemnification.

        17.1    Mutual Representations and Warranties.     The parties make the following representations and warranties to each other:

12


        17.2    Warranties Regarding Senomyx Technology.     Senomyx warrants to Kraft as of the Effective Date the following:

        17.3    Senomyx Indemnification.     Senomyx hereby agrees to defend and indemnify Kraft, and its respective officers, directors, employees, and agents (collectively, the "Kraft Indemnitees") from and against all damages or other amounts payable to a Third Party, including reasonable attorneys' fees and costs of litigation, resulting from a claim, demand, action, suit or other proceeding brought or threatened by a Third Party against a Kraft Indemnitee based on Senomyx's gross negligence or willful misconduct (but not patent infringement) relating to Senomyx's performance or failure to perform under this Agreement. IN NO EVENT WILL SENOMYX BE LIABLE FOR ANY INCIDENTAL OR CONSEQUENTIAL DAMAGES SUFFERED BY KRAFT RESULTING FROM THIS AGREEMENT.

        17.4    Warranties Relating to Kraft Technology.     Kraft represents and warrants to Senomyx as of the Effective Date the following:

        17.5    Kraft Indemnification.     

13


18.   Miscellaneous.

        18.1    Force Majeure.     Neither party will lose any rights hereunder or be liable to the other party for damages or losses on account of failure of performance by the defaulting party (other than a payment default) if the failure is occasioned by war, fire, explosion, flood, (e.g. El Niño), earthquake, strike, lockout, embargo, act of God, or any other similar cause beyond the control of the defaulting party; provided, however, that the party claiming force majeure has exerted all reasonable efforts to avoid or remedy such force majeure and thereafter takes all reasonable steps to mitigate any such delay in performance hereunder and any damages that may be incurred by the other party thereby.

        18.2    Governing Law and Jurisdiction.     This Agreement will be governed by the laws of the State of California, as such laws are applied to contracts entered into and to be performed entirely within such state.

        18.3    Binding Effect.     This Agreement will be binding upon and inure to the benefit of the successors and permitted assigns of the parties. Any assignment not in accordance with this Agreement will be void.

        18.4    Dispute Resolution.     The parties recognize that disputes as to certain matters may from time to time arise during the Term, which relate to either party's rights and/or obligations hereunder. It is the objective of the parties to establish procedures to facilitate the resolution of disputes arising under this Agreement in an expedient manner by mutual cooperation and without resort to arbitration. The parties agree that prior to any arbitration concerning this Agreement, Senomyx's head of R&D and Kraft's head of R&D will meet in person or by video-conferencing in a good faith effort to resolve any disputes concerning this Agreement. Within thirty days of a formal request by either party to the other party, either party may, by written notice to the other party, have such dispute referred to their respective officers designated or their successors, for attempted resolution by good faith negotiations, such good faith negotiations to begin within thirty days after such notice is received. Any dispute arising out of or relating to this Agreement which is not resolved between the parties or the designated officers of the parties pursuant to this Section 18.4 will be resolved by final and binding arbitration conducted in San Diego, California (unless the parties mutually agree to another location) in accordance with Sections 1282 through 1288 of the California Code of Civil Procedure. The arbitration will be conducted by three arbitrators who are knowledgeable in the subject matter at issue in the dispute. One arbitrator will be selected by Senomyx, and one arbitrator will be selected by Kraft. The

14



third arbitrator will be selected by mutual agreement of the two arbitrators selected by the parties. In conducting the arbitration, the arbitrators will (i) determine what discovery will be permitted, consistent with the goal of limiting the cost and time which the parties must expend for discovery (and provided that the arbitrators will permit such discovery they deem necessary to permit an equitable resolution of the dispute), (ii) ensure that the total time of the arbitration from filing to a final decision or executed settlement agreement is less than six months, and (iii) be able to decree any and all relief of an equitable nature, including, but not limited to, such relief as a temporary restraining order, a preliminary injunction, a permanent injunction, specific performance or repletion of property. The arbitrators will also be able to award actual or general damages, but will not award any other form of damage (e.g., consequential, punitive or exemplary damages). The parties will share equally the arbitrator's fees and expenses pending the resolution of the arbitration, unless the arbitrators, pursuant to their its right but not their obligations, requires the non-prevailing party to bear all or any portion of the costs of the prevailing party. The decision of the arbitrators will be final and binding on the parties and may be sued on or enforced by the party in whose favor it runs in any court of competent jurisdiction at the option of such party. Notwithstanding anything to the contrary in this Section 18.4, either party may seek immediate injunctive or other interim relief from any court of competent jurisdiction with respect to any breach of Sections 10 or 12 hereof, or otherwise to enforce and protect the Patent Rights, copyrights, trademarks, or other intellectual property rights Controlled by such party. In addition, arbitration will not be used to resolve disputes concerning Patent Rights. Disputes concerning Patent Rights, including, but not limited to, disputes concerning patent ownership, claim language, claim scope and issues of validity will be settled in a court of law. Any arbitration ruling that relies on an interpretation of Patent Rights will have no binding effect in a court of law on any Patent Rights related to this Agreement, unless such Patent Rights have been adjudicated in a court of law. In no event will a demand for arbitration be made after the date when the institution of a legal or equitable proceeding based on such claim, dispute or other matter in question would be barred by the applicable statute of limitations.

        18.5    Severability.     If any term, covenant or condition of this Agreement or the application thereof to any party or circumstance is, to any extent, held to be invalid or unenforceable, then the remainder of this Agreement, or the application of such term, covenant or condition to parties or circumstances other than those as to which it is held invalid or unenforceable, will not be affected thereby and each term, covenant or condition of this Agreement will be valid and enforced to the fullest extent permitted by law; the parties covenant and agree to renegotiate any such term, covenant or condition or the application thereof in good faith in order to provide a reasonably acceptable alternative to the term, covenant or condition of this Agreement or the application thereof that is invalid or unenforceable, it being the intent of the parties that the basic purposes of this Agreement are to be effectuated.

        18.6    Independent Contractors.     It is expressly agreed that Kraft and Senomyx will be independent contractors and that the relationship between the parties will not constitute a partnership or agency of any kind. Neither Kraft nor Senomyx will have the authority to make any statements, representations or commitments of any kind, or to take any action, which will be binding on the other party, without the prior written authorization of the other party to do so.

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        18.7    Entire Agreement; Amendment.     This Agreement sets forth all of the covenants, promises, agreements, warranties, representations, conditions and understandings between the parties, and supersedes and terminates all prior agreements and understandings between the parties, with respect to the subject matter hereof. There are no covenants, promises, agreements, warranties, representations, conditions or understandings, either oral or written, between the parties other than as set forth in this Agreement. No subsequent alteration, amendment, change or addition to this Agreement will be binding upon the parties unless reduced to writing and signed by the respective authorized officers of the parties. This Agreement will not be strictly construed against either party. Any conflict between the terms set forth in the text of this Agreement and the terms of any Appendix hereto will be resolved in favor of the text of this Agreement.

        18.8    Waiver.     Except as specifically provided for in this Agreement, the waiver from time to time by either of the parties of any rights or the failure to exercise any remedy will not operate or be construed as a continuing waiver of the same right or remedy or any of the other of such party's rights or remedies provided in this Agreement.

        18.9    Construction.     The term "Article" or "Section" can refer to any single paragraph level found in this Agreement or any collection of multiple paragraphs thereunder.

        18.10    No Third Party Beneficiaries.     No Third Party, including any employee of any party to this Agreement (except as specifically provided in this Agreement), will have or acquire any rights by reason of this Agreement. Nothing contained in this Agreement will be deemed to constitute the parties partners with each other or any Third Party.

        18.11    Notices.     Any notices or communications provided for in this Agreement to be made by either party to the other party must be in writing, in English, and will be made by prepaid air mail or overnight carrier with return receipt addressed to the other party at its address set forth below. Any such notice or communication may also be given by hand, or facsimile to the appropriate designation. Notices will be sent:

If to Senomyx, to:   Senomyx, Inc.
11099 North Torrey Pines Road
La Jolla, CA 92037
Facsimile number: (858) 404-0750
Attention: Corporate Counsel with a copy to the President

If to KRAFT, to:

 

KRAFT Foods
Three Lakes Drive
Northfield, IL 60096
Facsimile number: 847-646-4431
Attention: Patent Counsel with a copy to VP of Research

        By like notice, either party may specify or change an address to which notices and communications must be thereafter sent. Notices sent by mail, facsimile or overnight carrier will be effective upon receipt and notices given by hand will be effective when delivered.

        18.12    Assignment.     Notwithstanding any provision of this Agreement to the contrary, neither party may assign any of its rights or obligations under this Agreement in any country to any Third Party without the prior written consent of the non-assigning party, which consent will not be unreasonably withheld; provided, however, that either party may assign its rights and obligations under this Agreement without the consent of the other party (i) in connection with the transfer or sale of all or substantially all of its assets, or (ii) to any Affiliate. In the event of such transaction, however,

16



intellectual property rights (including Know-How) of a party to such transaction other than one of the parties to this Agreement will not be included in the technology licensed under this Agreement. Notwithstanding the foregoing, any such assignment to an Affiliate will not relieve the assigning party of its responsibilities for performance of its obligations under this agreement. This Agreement will survive any merger or consolidation of either party with or into another party and no consent for any such merger, consolidation or similar reorganization will be required hereunder.

        18.13    Counterparts.     This Agreement may be executed in two or more counterparts, each of which will be deemed an original, but all of which together will constitute one and the same instrument.

        IN WITNESS WHEREOF, the parties, through their authorized officers, have executed this Agreement as of the Effective Date.

KRAFT FOODS, INC.    

By:

 

/s/  
JOHN RUFF       

 

 

Title:

 

Senior V.P. R&D Quality


 

 

Date:

 

December 6, 2000


 

 

SENOMYX, INC.

 

 

By:

 

/s/  
PAUL A. GRAYSON       

 

 

Title:

 

President & CEO


 

 
Date:   December 6, 2000
   

17


COLLABORATIVE RESEARCH AGREEMENT

APPENDIX A—DEFINITIONS

        "Affiliate" means any corporation, company, partnership, joint venture, association or other entity, which directly or indirectly controls, is controlled by or is under common control with a party. As used in this definition, the term "control" means direct or indirect beneficial ownership of more than fifty percent (or such lesser percentage which is the maximum allowed to be owned by a foreign corporation in a particular jurisdiction) of the outstanding securities having voting rights for the election of directors in a corporation or of the comparable equity interest in any other type of entity.

        "Agreement" means this agreement, together with all appendices attached hereto, as it may be amended or supplemented from time to time hereafter by a written agreement executed by authorized representatives of both parties.

        " [***] Compound(s)" means [***] , discovered in the course of the Collaborative Program that [***] Tastants that may be optimized and further tested for [***] by Senomyx and for which Senomyx will prepare a written report of data to be reviewed by Kraft.

        " [***] Phase" means that part of the Collaborative Program wherein Senomyx will pursue the identification of [***] Compounds.

        " [***] Product(s)" means product(s) in Field II that incorporate Selected [***] Compound(s).

        " [***] Tastant(s)" means [***] is a primary ingredient and that are provided by Kraft to Senomyx under this Agreement.

        "Collaborative Period" means the period beginning on the Effective Date and ending three years thereafter, unless terminated earlier in accordance with Section 3 or 15. The

        Collaborative Period will terminate after three years regardless of whether the Compound Research has been completed.

        "Collaborative Program" means a research program during the Collaborative Period to discover molecules that [***] taste in Fields to be conducted pursuant to the Research Plan.

        "Compound(s)" means [***] Compound(s) and/or [***] Compound(s).

        "Confidential Information" means all information, Inventions and Know-How disclosed by one party to the other party pursuant to this Agreement, including, without limitation, information and material (whether or not patentable) regarding technology, products, research, development, manufacturing, marketing, finances, personnel or other business information or objectives which is designated as confidential in writing by the disclosing party, whether by letter or by the use of an appropriate stamp or legend, prior to or at the time any such material, trade secret or other information is disclosed by the disclosing party to the other party. Notwithstanding the foregoing to the contrary, Inventions, Know-How or other information which is orally, electronically or visually disclosed by a party, or is disclosed in writing without an appropriate letter, stamp or legend, will constitute Confidential Information of a party if the disclosing party, within thirty days after such disclosure, delivers to the other party a written document or documents describing the Inventions, Know-How or other information and referencing the place and date of such oral, visual, electronic or written disclosure and the names of the persons to whom such disclosure was made.

        "Control" or "Controlled" means, with respect to intellectual property, possession by a party, as of the Effective Date or during the Collaborative Period, of the ability to grant a license or sublicense in accordance with the terms of this Agreement, without violating the terms of any agreement by such party with any Third Party that is in effect on the Effective Date.

        "Effective Date" means the date that this Agreement is signed by the last party to sign below.

18



        "Field I" means the Product Category of [***] .

        "Field II" means the category of products containing [***] as a primary ingredients.

        "Fields" means collectively Field I and Field II.

        "Invention" means any invention, including any new and useful process, method, or composition of matter, or improvement thereto, whether or not patentable, made in the course of the Collaborative Program.

        "Joint Invention" has the meaning set forth in Section 11.4.

        "Joint Patent Rights" means all Patent Rights containing one or more claims to a Joint Invention.

        "Know-How" means information and data, whether or not patentable, which is not generally known to the public, including, without limitation, designs, concepts, formulae, software, techniques, practices, processes, methods, knowledge, skill, experience, expertise, technical information, Materials and data, including pharmacological, toxicological and clinical test data, analytical and quality control data, patent and legal data or marketing, sales and manufacturing data.

        "Kraft Know-How" means, to the extent necessary for purposes of the activities to be conducted under this Agreement, all Know-How Controlled by Kraft, including, but not limited to, formulations in which Selected Compounds are used, [***] and methods of incorporating and/or processing Selected Compounds into Products.

        "Kraft Patent Rights" means, to the extent necessary for purposes of the activities to be conducted under this Agreement, all Patent Rights Controlled by Kraft, including, without limitation, any Patent Rights containing one or more claims to an Invention made solely by employees or agents of Kraft, but excluding any Joint Patent Rights.

        "Kraft Technology" means Kraft Patent Rights and Kraft Know-How.

        "Materials" [***] including without limitation, Compounds and Selected Compounds.

        "Net Sales" means, with respect to a Product, the gross amount invoiced by Kraft and its Affiliates and/or permitted sublicensees on any sales or other transfer of the Product, less the following items:

        Net Sales will be determined from the books and records of Kraft, its Affiliates and/or its permitted sublicensees, maintained in accordance with United States generally accepted accounting principles.

        "New Product(s)" means any products outside those listed on Appendix C that incorporate Selected [***] Compounds in Field I.

        "Patent Rights" means all rights associated with all U.S. or foreign (including regional authorities such as the European Patent Office) regular or provisional patents or patent applications, including any continuation, continuation-in-part, or division thereof or any substitute application therefor or

19



equivalent thereof, and any patent issuing thereon, including any reissue, reexamination or extension thereof and any confirmation patent or registration patent or patent of additions based on any such patent.

        "Product(s)" means [***] Product(s) and/or [***] Product(s).

        "Product Category(ies)" means each category of [***] Products listed on Appendix C.

        "Product Development and Commercialization" means the program for development of a Product conducted during the term of this Agreement as provided under Section 3.5.

        "Receptor" or "Receptors" means [***].

        "Research Plan" means the plan outlining the research to be performed during the Collaborative Program agreed to by the Steering Committee at the first meeting thereof within thirty days of the Effective Date.

        "Royalty Term" means, in the case of any Product and as to any country, the period of time commencing on the first commercial sale for use or consumption of such Product in such country and ending upon the date that is ten years after the date of such first commercial sale for use or consumption of such Product in such country.

        "Selected [***] Compound(s)" means those [***] Compound(s) selected by Kraft for development, which are subject to certain payment and diligence provisions.

        "Selected Compound(s)" means Selected [***] Compound(s) and/or Selected [***] Compound(s).

        "Selected [***] Compound(s)" means those [***] Compound(s) selected by Kraft for development, which are subject to certain payment and diligence provisions.

        "Senomyx Know-How" means all Know-How related to the Collaborative Program, which is not covered by the Senomyx Patent Rights, but is necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which is Controlled by Senomyx as of the Effective Date or developed by Senomyx in the course of the Collaborative Program.

        "Senomyx Patent Rights" mean all Patent Rights that are necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which are Controlled by Senomyx as of the Effective Date or developed by Senomyx in the course of the Collaborative Program, but excluding any Joint Patent Rights.

        "Senomyx Technology" means the Senomyx Patent Rights, and Senomyx Know-How.

        " [***] Compounds" means [***] , discovered in the course of the Collaborative Program that [***] Tastants [***] and for which Senomyx will prepare a written report of data to be reviewed by Kraft.

        " [***] Phase" means that part of the Collaborative Program wherein Senomyx will pursue the identification of [***] Compounds.

        " [***] Product(s)" means any product(s) listed on Appendix C that incorporate Selected [***] Compound(s).

        " [***] Tastants" means molecules contained in [***] provided by Kraft to Senomyx under this Agreement.

        "Steering Committee" has the meaning set forth in Section 2.

        "Term" has the meaning set forth in Section 15.1.

        "Third Party(ies)" means any party other than a party to this Agreement or an Affiliate of Senomyx or Kraft.

20


COLLABORATIVE RESEARCH AGREEMENT

APPENDIX C—PRODUCT CATEGORIES

[***]

21



***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.


FIRST AMENDMENT
TO THE COLLABORATIVE
RESEARCH AND LICENSE AGREEMENT
BETWEEN SENOMYX AND KRAFT

        THIS FIRST AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT (the " First Amendment ") is made by and between SENOMYX, INC. (" Senomyx "), a Delaware corporation, having a principal place of business at 11099 North Torrey Pines Road, La Jolla, California 92037, and KRAFT FOODS, INC (" Kraft "), a Delaware corporation, having offices at 801 Waukegan Road, Glenview, IL 60025.

        WHEREAS, Senomyx and Kraft entered into that certain Collaborative Research and License Agreement dated December 6, 2000 (the " Agreement ") to collaborate in a research program to (i) discover compounds that [***] ; and (ii) discover compounds that [***] (capitalized terms used but not otherwise defined in this First Amendment shall have the meanings given such terms in the Agreement); and

        WHEREAS, Senomyx and Kraft wish to amend the Agreement in the manner set forth in this First Amendment.

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree to amend the Agreement as follows:

        I.     The first paragraph of Article 3 of the Agreement is hereby amended and restated its entirety as follows:

        II.      Section 3.1 of the Agreement is hereby amended to include a new Subsection 3.1.1 as stated herein. The numbering of all other sections of Article 3 will remain unchanged.

1


        III.      Section 3.3 of the Agreement is hereby amended and restated in its entirety as follows:

        IV.      Section 9.1 of the Agreement is hereby amended and restated in its entirety as follows:

2


        V.      Section 9.2 of the Agreement is hereby amended and restated in its entirety as follows:

        VI.      Section 9.3 of the Agreement is hereby amended to include a new Subsection 9.3.1 as stated herein. The numbering of all other sections of Article 9 will remain unchanged.

        VII.      Section 10.1(A) of the Agreement is hereby amended and restated in its entirety as follows:

        VIII.     Section 15.2 of the Agreement is hereby amended and restated in its entirety as follows:

3


        IX.     The following definitions of Appendix A of the Agreement are hereby amended and restated herein. All other definitions in the Agreement will remain unchanged.

4


        X.      Miscellaneous.

        IN WITNESS WHEREOF, the parties have executed this First Amendment effective as of May 2, 2002.

SENOMYX, INC.   KRAFT FOODS, INC.

/s/  
PAUL A. GRAYSON       
Paul A. Grayson
Chairman and CEO

 

/s/  
TODD [TEXT ILLEGIBLE]       

5




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COLLABORATIVE RESEARCH AND LICENSE AGREEMENT BETWEEN SENOMYX, INC. AND KRAFT FOODS, INC.
FIRST AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT BETWEEN SENOMYX AND KRAFT

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Exhibit 10.14

***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.


COLLABORATIVE RESEARCH
AND LICENSE AGREEMENT

BETWEEN

SENOMYX, INC.

AND

CAMPBELL SOUP COMPANY

1


COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

        This Agreement is entered into as of the Effective Date by and between Senomyx, Inc., a Delaware Corporation having offices at 11099 North Torrey Pines Road, La Jolla, CA 92037 ("Senomyx") and Campbell Soup Company, having its principal place of business at Campbell Place, Camden, NJ 08103-1799 ("Campbell").

BACKGROUND

        Senomyx conducts research in the field of chemosensation, an objective of which is to study potential biological targets and develop assays for use in the discovery and Product Commercialization Plan of products in taste and olfaction. Campbell is in the business of developing, manufacturing and marketing consumer food products. Senomyx and Campbell desire to collaborate in a research and development program to discover GRAS approved or GRAS approvable compounds that can [***] .

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree as follows:

THE AGREEMENT

1.     Definitions.     Certain terms set forth in this Agreement with initial capitals are defined in Appendix A, which is incorporated herein by reference.

2.     Steering Committee.     No later than ten days after the Effective Date, the parties will establish a joint steering committee (the "Steering Committee"). The Steering Committee will manage the Collaborative Program and will (i) provide strategic direction and performance criteria for the Collaborative Program; (ii) monitor progress and communicate status of the Collaborative Program; (iii) facilitate the cooperation of the parties under the Collaborative Program; and (iv) will continue to communicate following the Collaborative Period regarding the development and commercialization of Products and New Products. The Steering Committee will consist of not less than two representatives designated by Senomyx and not less than two representatives designated by Campbell, as the parties shall agree from time to time. Each member of the Steering Committee will have one vote. Scientific and management authority and responsibility for activities conducted under the Collaborative Protocol will be governed by the Steering Committee. The Steering Committee will meet no later than thirty days after the Effective Date and at least four times per year during the Term of the Agreement using mutually agreed upon meeting locations and formats including tele-conferencing and video-conferencing. Each party shall bear its own expenses relating to the meetings and activities of the Steering Committee. On an alternating basis, one party will promptly prepare and deliver to the members of the Steering Committee minutes of such meetings for review and approval of both parties. Each party may change their individual members of the Steering Committee as each may deem to be advisable from time to time with prior approval of the Steering Committee, so long as there are always an equal number of representatives from each party. Decisions in the Steering Committee will be made by unanimous vote, at a meeting where all voting representatives are present. All unresolved disputes will be settled in accordance with Section 16.4, or as otherwise mutually agreed upon in writing.

3.     Collaborative Program.     The parties will collaborate exclusively in the conduct of the Collaborative Program in accordance with the Collaborative Protocol during the Collaborative Period. The Collaborative Protocol, attached hereto as Appendix C and incorporated into the Agreement by reference, may be revised from time to time as the parties shall agree. The parties will jointly perform the Collaborative Protocol outlined in Appendix C.

        3.1    Development Phase.     

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        3.2    Responsibilities of Parties in Development Phase     

        3.3    Product Commercialization Plan.     Within [***] of approval of the Consumer Acceptance Testing data, Campbell will prepare a Product Commercialization Plan detailing the commercially reasonable timing of manufacture, launch and commercialization of Product(s) in each country where regulatory approval is granted which will be approved by Senomyx and which will be attached as Appendix D to this Agreement, and incorporated into the Agreement by reference. The parties acknowledge that the Steering Committee shall not be responsible for drafting or approval of the Commercialization Plan. Campbell will initiate the Product Commercialization Plan outlined in Appendix D within a commercially reasonable period of time not to exceed [***] for such initiation. The Product Commercialization Plan may be revised from time to time, as the parties shall agree in writing, to reflect changing market conditions and to develop other Product Commercialization Plans and marketing plans as Campbell markets the Products worldwide. [***] .

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4.     Collaboration with an Affiliate or Third Party.     Subject to the limitations of Section 8.5, Senomyx will have the right to enter into collaborative programs with its Affiliates or with Third Parties including collaborative programs to discover compounds that [***] taste for use outside the Field and to modify modalities of taste and flavor other than [***] taste within the Field. The parties acknowledge that Senomyx will not use any Product Compound with any Third Party within the Field or in violation of this Agreement. Campbell will have the right to enter into collaborative programs with its Affiliates and Third Parties.

5.     Law and Regulation.     The Compounds, Selected Compounds, Product Compounds and Materials provided by Senomyx under this Agreement shall be used in compliance with all applicable laws and regulations. Senomyx certifies that it conducts tests in vitro or other tests that are only used for laboratory research purposes and that all Materials and chemicals under this Agreement will actually be used for these purposes only.

6.     Reporting.     Each party will report to the other a written summary of results of research and development work it carries out, if any, under this Agreement within thirty days of the end of each calendar quarter. Each party agrees to prepare and exchange written and electronic reports concerning any results and data that must be used by either party as supporting information for any regulatory filings. The exchange of such report may be reasonably supplemented, at the request of the party receiving a report, by correspondence and/or upon reasonable prior notice, visits to the other party's facilities.

7.     Financial Terms.

        7.1    Annual Research Support.     Campbell will provide funding to Senomyx for [***] for the first three (3) years, such rate to be increased for inflation using the Aon Consulting/Radford Division report for industry compensation. Research support payments will be made by Campbell according to the following schedule:

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        7.2    Milestone Payments.     Campbell will pay Senomyx the following non-creditable, non-refundable milestone payment: [***] .

        7.3    Royalty for Products.     Campbell will pay to Senomyx the following earned royalties during the Royalty Term:

        7.4    Payment Terms.     For each quarter ending on or about October 31 of each year, Campbell will pay royalties due for such quarter under Section 7.3 on or before the next December 15. For each quarter ending on or about January 31 of each year, Campbell will pay royalties due for such quarter under Section 7.3 on or before the next March 15. For each quarter ending on or about April 30 of each year, Campbell will pay royalties due for such quarter under Section 7.3 on or before the next June 15. For each quarter ending on or about July 31 of each year, Campbell will pay royalties due for such quarter under Section 7.3 on or before the next September 15. With each such quarterly payment, Campbell will furnish to Senomyx a royalty statement in sufficient detail to permit confirmation of the accuracy of the royalty payment made, which sets forth on a [***] basis the relevant sales information, including the total number of units of each such Product or New Product sold, Net Sales for the Products [***] (applicable only for total annual Net Sales), the royalties payable in United States dollars, the method used to calculate the royalty, the exchange rate used and other information employed to calculate Net Sales for such Product or New Product [***] (if applicable).

        7.5    Currency of Payment.     All payments to be made under this Agreement, including the royalties payable to Senomyx by Campbell, will be paid in United States dollars by wire transfer to [***] , unless notified by Senomyx pursuant to Section 16.11. Translation of Net Sales recorded in local currencies to United States dollars will be performed in a manner consistent with Campbell's normal practices used to prepare its audited financial statements for internal and external reporting purposes, which uses a widely accepted published exchange rate.

        7.6    Taxes Withheld.     Any income or other tax that Campbell, or any of its Affiliates is required by a government agency to withhold and pay on behalf of Senomyx with respect to the royalties payable under this Agreement will be deducted from and offset against such royalties prior to remittance to Senomyx; provided, however, that in regard to any tax so deducted, Campbell will give or cause to be given to Senomyx such assistance as may reasonably be necessary to enable Senomyx to claim exemption from or credit for the tax so deducted, and in each case will promptly furnish to Senomyx proper evidence of the taxes paid on Senomyx's behalf.

        7.7    Late Payment.     In the event that any payment, including royalty payments, due hereunder is not made when due, the payment will accrue interest from that date due at the rate of [***] ; provided, however, that in no event will such rate exceed the maximum legal annual interest rate. The payment of such interest will not limit Senomyx from exercising any other rights it may have as a consequence of the lateness of any payment.

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        7.8    Records of Unit Sales, Net Sales and Royalty Calculations.     During the Royalty Term and for a period of three years thereafter, Campbell will keep complete and accurate records of Net Sales and all other information necessary to calculate Net Sales of Products, New Products and [***] (as applicable) in sufficient detail to allow the accrued royalties to be determined accurately in accordance with United States generally accepted accounting principles and to verify the royalty payments pursuant to Section 7.3. Senomyx, with reasonable written notice to Campbell, will have the right to cause Senomyx's nationally recognized independent, certified public accountant to audit such records at the place or places of business where such records are customarily kept in order to verify the accuracy of the reports of Net Sales and royalty payments. Such accountant must execute a confidentiality agreement prior to entering Campbell's premises, obligating such accountant to keep all information disclosed to it confidential and will only be permitted to disclose to Senomyx the extent of any discrepancy between royalty payments made by Campbell under this Agreement and the actual royalty required to be so paid. Senomyx will bear the full cost of such audit unless such audit discloses a variance of more than [***] from the amount of the royalties due under this Agreement, in which event, Campbell will bear the full cost of such audit. In all events, Campbell will pay any underpayment with interest in accordance with Section 7.8. Senomyx agrees not to disclose Confidential Information concerning royalty payments reports, and all other information learned in the course of an audit or inspection, except to the extent necessary for Senomyx to enforce its rights under this Agreement or if disclosure is required by law.

8.     Grants.     Subject to the terms and conditions of this Agreement, Senomyx hereby grants to Campbell and Campbell hereby grants to Senomyx the following rights:

        8.1    Grant of Rights regarding Compounds, Selected Compounds, Products, and New Products:     

        8.2    Limitations to Licenses.     Campbell may not sublicense its rights under Section 8 to Third Parties and Affiliates, except for the purpose of entering into collaborative development agreements between any such Third Party and/or Affiliate and Campbell that provide the support, as is appropriate at the time, for research, development or pursuant to the Product Commercialization Plan of Product(s), and as agreed to by Senomyx in writing. All rights granted by Senomyx to Campbell under Section 8 shall be subject to the Campbell's diligence obligations under Section 3 of this Agreement and the timely payment by Campbell under Section 7 of the Agreement.

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        8.3    Grant of Rights from Campbell to Senomyx.     Campbell hereby grants to Senomyx a fully paid, non-exclusive, worldwide, fully-transferable license, to use the Campbell Technology for research purposes only under this Agreement, with the right to grant sublicenses for research purposes only; provided, however, that any such sublicense shall be subject to the prior written approval of Campbell, which shall not be unreasonably withheld. Nothing in this Agreement is intended to provide Senomyx with any Campbell Technology for uses other than research purposes and, in no event, will Senomyx or any Third Party use Campbell Technology for commercialization.

        8.4    Right to Negotiate License for Product Compounds Outside the Field.     Notwithstanding the provisions contained within this Agreement, Campbell may, at any time, request to negotiate for a license for the use of Product Compounds outside the Field. However, the parties understand that any such negotiation and license will be subject to Third Party agreements entered into by Senomyx and the final decision to enter into such license shall be made by Senomyx, in its sole discretion.

        8.5    Right to Negotiate License for Other Compounds for Use Within the Field.     Campbell may, at any time request to negotiate for a license to use compounds developed by Senomyx other than Compounds or Selected Compounds, for use within the Field. However, the parties understand that any such negotiation and license will be subject to Third Party agreements entered into by Senomyx and the final decision to enter into such license shall be made by Senomyx, in its sole discretion.

9.     Ownership of Intellectual Property.

        9.1    Transfer of Rights.     The parties retain all rights not expressly licensed or assigned in this Agreement. Except as otherwise expressly provided in this Agreement, nothing in this Agreement is intended to convey or transfer ownership or the grant of any license or sublicense by one party to the other party of any rights in any Confidential Information, Patent Rights or Know-How Controlled by a party. Except, as expressly set forth in this Agreement, nothing in this Agreement will be construed to grant manufacturing rights.

        9.2    Senomyx Inventions.     Senomyx will own all Inventions and other Know-How made solely by its employees and agents and all Patent Rights claiming such Inventions and other Know-How.

        9.3    Campbell Inventions.     Campbell will own all Inventions and other Know-How made solely by its employees and agents, and all Patent Rights claiming such Inventions and other Know-How. To the extent that such Campbell Inventions and Know-How materially incorporate Senomyx Technology, Compounds, Product Compounds or Selected Compounds or consist of material improvements to such Senomyx Technology, Compounds, Product Compounds or Selected Compounds, Campbell hereby assigns to Senomyx all interest in and to any such Inventions and other Know-How, subject to the licenses granted to Campbell under Section 8. Senomyx hereby irrevocably assigns to Campbell all interest in and to any such Inventions and other Know-How that consist of improvements to Campbell Technology. In the event that either party is legally unable to assign such rights to the other, then the assignor agrees either to waive the enforcement of such rights against assignee and any sublicensees and assignees, or to grant the assignee an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights. Nothing in this Section 9.3 is intended to transfer or assign to Senomyx any Campbell Know-How, Inventions or Technology that do not materially incorporate the Senomyx Technology, Compounds, Product Compounds or Selected Compounds. Nothing in this Agreement is intended to permit Senomyx to use Campbell Technology, whether or not assigned or licensed to Senomyx, to Campbell's detriment or to benefit Campbell's competitors.

        9.4    Joint Inventions.     All Inventions conceived jointly by employees or agents of Senomyx and employees or agents of Campbell (the "Joint Inventions") and all Joint Patent Rights will be owned jointly by Campbell and Senomyx. Campbell hereby irrevocably assigns to Senomyx all interest in and to any Joint Inventions that consist of improvement to Senomyx Technology, Compounds, Product

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Compounds or Selected Compounds and uses thereof, and all Joint Patent Rights claiming such Joint Inventions, subject to the licenses granted to Campbell under Section 8. In the event that Campbell is legally unable to assign such rights to Senomyx, then Campbell agrees either to waive the enforcement of such rights against Senomyx and any sublicensees and assignees, or to grant Senomyx an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights. Nothing in this Section 9.4 shall prohibit Campbell from using the Joint Inventions and Joint Patent Rights consistent with this Agreement. Senomyx hereby irrevocably assigns to Campbell all interest in and to any Joint Inventions that consist of improvement to Campbell Technology and uses thereof, and all Joint Patent Rights claiming such Joint Inventions, subject to the licenses granted to Senomyx under Section 8. In the event that Senomyx is legally unable to assign such rights to Campbell, then Senomyx agrees either to waive the enforcement of such rights against Campbell and any sublicensees and assignees, or to grant Campbell an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        9.5    Other Inventions.     Any Inventions not included in Sections 9.2, 9.3, or 9.4 will be owned by their inventors.

        9.6    Inventorship and Assignment.     United States patent law will determine inventorship of patentable inventions. Senomyx and Campbell agree to execute all documentation necessary to perfect all assignments of Inventions, Know-How and Patent Rights contemplated in this Agreement.

        9.7    Markings.     Campbell agrees to mark and to cause any Affiliate or sublicensee to mark any Product or New Product (or their containers or labels) made, sold or otherwise disposed of by it or them with any notice of Patent Rights necessary or desirable under applicable law to enable the Senomyx Patent Rights or Joint Patent Rights, as applicable, to be enforced to their full extent in any [***] where Products or New Products using the Product Compound(s) are made, used or sold. Subject to the mutual agreement of Campbell and Senomyx, Campbell agrees to mark and to cause any Affiliate or sublicense to mark any Product or New Product (or their containers or labels) made, sold or otherwise disposed of by it or them with the trademark of the Product Compound or Senomyx (the "Trademarks"). Subject to the terms and conditions of the Agreement, Senomyx hereby grants to Campbell a non-exclusive, nontransferable (except as permitted under Section 9.2 and 16.12) worldwide license to use the Trademark solely in connection with the marketing and sale of the Products or New Products; provided, however, that: (i) Campbell shall comply with all applicable laws and regulations with respect to the Trademark and shall not do or suffer to be done any act or thing that would impair Senomyx's rights; and (ii) Campbell agrees not to adopt or use any other trademark, words or symbol that features or includes the word Senomyx or any marks which are confusingly similar to the Trademark on the Products or New Products. The placement of the Trademark or any other proprietary mark of Senomyx on Campbell's labels or packaging or in Campbell's marketing materials shall be at the discretion of Campbell, subject to Senomyx's prior approval, not to be unreasonably withheld.

        9.8    Manufacturing.     Campbell may in its sole discretion, manufacture or enter into supply and manufacturing agreements with a mutually agreed upon Third Party regarding Product Compounds; provided however, Senomyx will have the first right of negotiation and refusal to manufacture any such Product Compounds, subject to provisions of cost, quality and quantity. Within [***] of notice to Campbell of its intention to bid the project, Senomyx shall supply Campbell with samples and detailed costs with respect to the manufacture. In the event Senomyx shall not reply within such time period and has not requested and been granted by Campbell an additional amount of time to respond, Senomyx shall be deemed to have declined to bid the project. Nothing in this Agreement shall require Campbell to offer the bid to Senomyx if it is unable to meet Campbell's requirements of cost, specifications or timeframe or such other terms and conditions as Campbell, in its sole discretion, deems to be material.

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10.   Treatment of Confidential Information; Publicity.

        10.1    Confidentiality.     Subject to the terms and conditions of this Agreement, Senomyx and Campbell each agree that, during the Term and for a period of [***] thereafter, it will keep confidential, and will cause its Affiliates to keep confidential, all Confidential Information that is disclosed to it or to any of its Affiliates by the other party. Neither Senomyx nor Campbell nor any of their respective Affiliates will use the other party's Confidential Information except as expressly permitted in this Agreement.

        10.2    Disclosure to Related Parties.     Senomyx and Campbell each agree that any disclosure of the other party's Confidential Information to any officer, employee, contractor, consultant, sublicensee or agent of the other party or to any of its Affiliates will be made only if and to the extent necessary to carry out its responsibilities under this Agreement and to exercise the rights granted to it hereunder, will be limited to the extent consistent with such responsibilities and rights, and will be provided only to such persons or entities who are under an obligation of confidentiality no less stringent than as set forth in this Agreement. Each party will use reasonable efforts to take such action, and to cause its Affiliates to take such action, to preserve the confidentiality of each other's Confidential Information, which will be the same efforts as it would customarily take to preserve the confidentiality of its own Confidential Information.

        10.3    Return of Confidential Material Upon Termination.     Upon termination of this Agreement, each party, upon the other party's request, will return or destroy all Confidential Information received from the other party pursuant to this Agreement, including all copies and extracts of documents, within thirty days of the request of the other party; provided, however, one copy of the Confidential Information may be retained in a secure location with limited access for legal purposes only. Each party, upon the other party's request, will provide the requesting party with a list of the Confidential Information being retained.

        10.4    Exceptions to Confidential Information.     Confidential Information will not include any information, which the receiving party can prove by competent written evidence:

        A party may also disclose Confidential Information of the other party where required to do so by law or legal process; provided, however, that, in such event, the party required to disclose such information must give advance written notice of such disclosure to the other party and must cooperate with the other party's efforts to seek, at the request and expense of the other party, all confidential treatment and protection for such disclosure as is permitted by applicable law.

        10.5    Confidential Financial Information.     The parties agree that the material financial terms of this Agreement will be considered Confidential Information of both parties. Notwithstanding the foregoing, either party may disclose such terms in legal proceedings or as are required to be disclosed in its financial statements, by law, or under an obligation of confidentiality to bona fide potential sublicensees. Either party will have the further right to disclose the material financial terms of this

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Agreement under an obligation of confidentiality to any potential acquirer, merger partner, bank, venture capital firm, or other financial institution to obtain financing. Notwithstanding the foregoing, the parties will agree upon a press release to announce the execution of this Agreement. Thereafter, Campbell and Senomyx may each disclose to Third Parties the information contained in such press release without the need for further approval by the other party.

        10.6    Confidential Research Information.     The parties agree that all results and data generated from the research under the Collaborative Program will be owned jointly by Senomyx and Campbell to the extent of their respective contributions and considered Confidential Information of the parties subject to the confidentiality requirements of Section 10. Neither party will provide to a Third Party any Materials provided by the other or any Confidential Information without the express written consent of the other party.

        10.7    Permitted Use and Disclosures.     Each party may use or disclose Confidential Information disclosed to it by the other party to the extent such information is included in the Campbell Technology, Senomyx Technology or Joint Patent Rights, and to the extent such use or disclosure is reasonably necessary and permitted in the exercise of the rights granted hereunder in filing or prosecuting patent applications, prosecuting or defending litigation, complying with applicable governmental regulations, or court orders or otherwise submitting information to tax or other governmental authorities, conducting clinical trials, submitting information for food additive approval applications, or making a permitted sublicense or otherwise exercising rights expressly granted to the other party pursuant to the terms of this Agreement; provided, however, that if a party is required to make any such disclosure of the other party's Confidential Information, other than pursuant to a confidentiality agreement, it will give reasonable advance notice of such disclosure to the other party where reasonably possible and, save to the extent inappropriate in the case of patent applications, will use its reasonable efforts to secure confidential treatment of such Confidential Information in consultation with the other party prior to such disclosure (whether through protective orders or otherwise) and disclose only the minimum necessary to comply with such requirements.

        10.8    Use of Data for Promotional Purposes.     Either party may (i) make public statements regarding Compounds, Selected Compounds, Product Compounds Products or New Products by announcing the achievement of milestones and fees therefor, following consultation with the other party and with the written consent of the other party to the form and content of the public statement, and (ii) without the prior consent of the other party, make public statements regarding the overall success rate(s) achieved by and/or for its customers with the use of Campbell Technology or Senomyx Technology; provided, however, that it may not disclose any chemical structures, screens or the other party's name or identity.

        10.9    Publication of Results.     Subject to this Section 10, results and data obtained by either party in the course of the collaboration may be submitted for publication by either party in accordance with such party's customary practices. The submitting parting shall send a copy of the proposed publication to the other party and will allow such party [***] from the date of receipt in which to determine whether such publication contains subject matter for which patent protection should be sought prior to disclosure, or otherwise contains such party's Confidential Information. The non-submitting party will use its best efforts to reply to Senomyx within the [***] period. In the event that the non-submitting party does not respond during the [***] period, the submitting party shall be free to publish the report with [***] prior notice to the other party as provided under Section 16.11.

        10.10    Publicity.     Except as required by law and as provided in this Section 10, neither party may make any public announcement or otherwise disclose the terms of this Agreement without the prior written consent of the other party, which consent will not be unreasonably withheld.

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11.   Intellectual Property Enforcement and Defense of Claims.

        11.1    Intellectual Property Enforcement.     Subject to the Third Party obligations of Senomyx, each party will have the right, but not the obligation, to bring proceedings against any Third Party for the inappropriate use, including patent infringement, of Patent Rights solely Controlled by it, at its own risk and expense. If either party brings such an action, such party will be entitled to control such action, hire and retain counsel, make decisions, settle on any terms, and retain any and all awards or damages obtained in any such proceeding. At the request and expense of either party, the other party will give the requesting party all reasonable assistance required to file and conduct any such proceeding.

        11.2    Defense of Infringement Claims for Senomyx Technology.     Campbell will cooperate with Senomyx, at Senomyx's expense, in the defense of any suit, action or proceeding against Campbell or Senomyx or Senomyx's Affiliates alleging the infringement of the intellectual property rights of a Third Party by reason of Campbell's or Senomyx's use of any Senomyx Technology licensed to Campbell under this Agreement. The parties shall notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. Campbell will give to Senomyx full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding and Campbell will execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

        11.3    Defense of Infringement Claims for Campbell Technology.     Senomyx will cooperate with Campbell, at Campbell's expense, in the defense of any suit, action or proceeding against Senomyx or Campbell alleging the infringement of the intellectual property rights of a Third Party by reason of Campbell's or Senomyx's use of any Campbell Technology licensed to Senomyx under this Agreement. The parties shall notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. At the expense of Campbell, Senomyx will give to Campbell full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding and Campbell will execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

12.     Patent Prosecution and Maintenance.     The control and expense of the filing, prosecution (including an opposition or interference) and maintenance of Patent Rights or other intellectual property rights claiming Inventions made solely by a party will be the sole responsibility of the party that made such Invention, and the party not filing the patent application will cooperate in such filing, prosecution and maintenance. Senomyx and Campbell will determine by mutual agreement which party will be responsible for, and will cooperate in, the filing, prosecution and maintenance of Joint Patent Rights and will share equally in the expenses incurred with respect thereto.

13.   Term and Termination.

        13.1    Term.     The term of this Agreement will begin on the Effective Date and will continue through the end of the Royalty Term, unless terminated earlier in accordance with the provisions of Section 13.2, 13.3 or 13.4 hereof (the "Term").

        13.2    Termination by Campbell.     Campbell will have the right to terminate this Agreement without cause at any time upon sixty (60) days written notice, provided, however, if such termination occurs prior to the date, which is 30 months from the Effective Date, Campbell must provide research funding in accordance with Section 7.1 for a period of six months from the date of written notice of termination.

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        13.3    Termination By Mutual Agreement.     The parties may terminate this Agreement at any time, in whole or in part, by mutual written agreement executed by both parties.

        13.4    Termination for Breach.     Either party has the right to terminate this Agreement at any time for an Event of Default. The non-breaching party, upon termination of this Agreement, may seek actual or general damages and remedies available to it at law or in equity. NEITHER PARTY WILL SEEK PUNITIVE OR CONSEQUENTIAL DAMAGES.

14.   Effect of Termination.

        14.1     Upon termination of this Agreement in the case of Campbell's breach or voluntary termination, Campbell will have no right to practice within or use of the Senomyx Technology, and all rights, title and interest in and to the Senomyx Technology will revert to and become the sole property of Senomyx, unless otherwise agreed upon in writing by the parties on or before the effective date of such termination.

        14.2     In the event that either party is in material default under any of the terms or conditions of this Agreement or has materially breached any of its representations or warranties in this Agreement, the non-defaulting or non-breaching party may terminate or suspend all or any part of this Agreement by notice to the defaulting party, which termination shall be effective immediately upon the giving of such notice, and shall be entitled to pursue all further remedies then available at law or in equity.

        14.3     Expiration or termination of this Agreement will not relieve the parties of any obligation accruing prior to such expiration or termination.

        14.4    Survival.     The obligations and rights of the parties under Sections 7.8, 9.1 through 9.7, 10, 14, 15.2(B), 15.3, 15.4(B), 15.5, 16, and Appendix A, will survive termination or expiration of this Agreement.

15.   Warranties and Indemnification.

        15.1    Mutual Representations and Warranties.     The parties make the following representations and warranties to each other:

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        15.2    Warranties Regarding Senomyx Technology.     Senomyx warrants to Campbell as of the Effective Date the following:

        15.3    Senomyx Indemnification.     Senomyx hereby agrees to defend and indemnify Campbell, and its respective officers, directors, employees, and agents (collectively, the "Campbell Indemnitees") from and against all damages or other amounts payable to a Third Party, including reasonable attorneys' fees and costs of litigation, resulting from a claim, demand, action, suit or other proceeding brought or threatened by a Third Party against a Campbell Indemnitee based on Senomyx's gross negligence or willful misconduct (but not patent infringement, which is covered in Section 11) relating to Senomyx's performance or failure to perform under this Agreement. IN NO EVENT WILL SENOMYX BE LIABLE FOR ANY INCIDENTAL OR CONSEQUENTIAL DAMAGES SUFFERED BY CAMPBELL RESULTING FROM THIS AGREEMENT.

        15.4    Warranties Relating to Campbell Technology.     Campbell represents and warrants to Senomyx as of the Effective Date the following:

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        15.5    Campbell Indemnification.     

16.   Miscellaneous.

        16.1    Force Majeure.     Neither party will lose any rights hereunder or be liable to the other party for damages or losses on account of failure of performance by the defaulting party (other than a payment default) if the failure is occasioned by war, fire, explosion, flood, (e.g. El Niño), earthquake, strike, lockout, embargo, act of God, or any other similar cause beyond the control of the defaulting party; provided, however, that the party claiming force majeure has exerted all reasonable efforts to avoid or remedy such force majeure and thereafter takes all reasonable steps to mitigate any such delay in performance hereunder and any damages that may be incurred by the other party thereby. If such failure to perform continues beyond one year from the date that such party first claimed force majeure in writing, the parties will meet and confer on reasonable measures to undertake in order to restore the rights and obligations of this Agreement. In the alternative, either party may terminate this Agreement in the event of a force majeure, which is not remedied within the one-year timeframe.

        16.2    Governing Law and Jurisdiction.     This Agreement will be governed by the laws of the State of California, as such laws are applied to contracts entered into and to be performed entirely within such state.

        16.3    Binding Effect.     This Agreement will be binding upon and inure to the benefit of the successors and permitted assigns of the parties. Any assignment not in accordance with this Agreement will be void.

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        16.4    Dispute Resolution.     The parties recognize that disputes as to certain matters may from time to time arise during the Term, which relate to either party's rights and/or obligations hereunder. It is the objective of the parties to establish procedures to facilitate the resolution of disputes arising under this Agreement in an expedient manner by mutual cooperation and without resort to arbitration. The parties agree that prior to any arbitration concerning this Agreement, Senomyx's president and Campbell's Vice President of Research and Development or Vice President of Purchasing will meet in person in a good faith effort to resolve any disputes concerning this Agreement. Within thirty days of a formal request ("Formal Request") by either party to the other party, either party may, by written notice to the other party, have such dispute referred to the parties' officers designated or their successors, for attempted resolution by good faith negotiations, such good faith negotiations to begin within thirty days after such notice is received. Any dispute arising out of or relating to this Agreement which is not resolved between the parties or the designated officers of the parties pursuant to this Section 16.4 within 60 days of the Formal Request will be resolved by final and binding arbitration conducted in San Diego, California (unless the parties mutually agree to another location) in accordance with Sections 1282 through 1288 of the California Code of Civil Procedure. The arbitration will be conducted by three attorneys acting as arbitrators who have a commercial background and are knowledgeable in the subject matter at issue in the dispute. Senomyx will select one arbitrator, and Campbell will select one arbitrator. The third arbitrator will be selected by mutual agreement of the two arbitrators selected by the parties. In conducting the arbitration, the arbitrators will (i) determine what discovery will be permitted, consistent with the goal of limiting the cost and time which the parties must expend for discovery (and provided that the arbitrators will permit such discovery they deem necessary to permit an equitable resolution of the dispute), (ii) ensure that the total time of the arbitration from filing to a final decision or executed settlement agreement is less than six months, and (iii) be able to decree any and all relief of an equitable nature, including, but not limited to, such relief as a temporary restraining order, a preliminary injunction, a permanent injunction, specific performance or repletion of property. The arbitrators will also be able to award actual or general damages, but will not award any other form of damage (e.g., consequential, punitive or exemplary damages). The parties will share equally the arbitrator's fees and expenses pending the resolution of the arbitration. The decision of the arbitrators will be final and binding on the parties and may be sued on or enforced by the party in whose favor it runs in any court of competent jurisdiction at the option of such party. Notwithstanding anything to the contrary in this Section 16.4, either party may seek immediate injunctive or other interim relief from any court of competent jurisdiction with respect to any breach of Sections 10 or 12 hereof, or otherwise to enforce and protect the Patent Rights, copyrights, trademarks, or other intellectual property rights Controlled by such party. In addition, arbitration will not be used to resolve disputes concerning Patent Rights. Disputes concerning Patent Rights, including, but not limited to, disputes concerning patent ownership, claim language, claim scope and issues of validity will be settled in a court of law. Any arbitration ruling that relies on an interpretation of Patent Rights will have no binding effect in a court of law on any Patent Rights related to this Agreement, unless such Patent Rights have been adjudicated in a court of law relevant to the parties hereto. In no event will a demand for arbitration be made after the date when the institution of a legal or equitable proceeding based on such claim, dispute or other matter in question would be barred by the applicable statute of limitations. Notwithstanding any of the foregoing or the outcome of the arbitration proceeding, each party shall bear its own expenses including, without limitation, attorneys fees and court costs, even if the arbitrators have the discretion to award such fees and costs to the prevailing party.

        16.5    Severability.     If any term, covenant or condition of this Agreement or the application thereof to any party or circumstance is, to any extent, held to be invalid or unenforceable, then the remainder of this Agreement, or the application of such term, covenant or condition to parties or circumstances other than those as to which it is held invalid or unenforceable, will not be affected thereby and each term, covenant or condition of this Agreement will be valid and enforced to the fullest extent permitted by law; the parties covenant and agree to renegotiate any such term, covenant

15



or condition or the application thereof in good faith in order to provide a reasonably acceptable alternative to the term, covenant or condition of this Agreement or the application thereof that is invalid or unenforceable, it being the intent of the parties that the basic purposes of this Agreement are to be effectuated.

        16.6    Independent Contractors.     It is expressly agreed that Campbell and Senomyx will be independent contractors and that the relationship between the parties will not constitute a partnership or agency of any kind. Neither Campbell nor Senomyx will have the authority to make any statements, representations or commitments of any kind, or to take any action, which will be binding on the other party, without the prior written authorization of the other party to do so.

        16.7    Entire Agreement; Amendment.     This Agreement sets forth all of the covenants, promises, agreements, warranties, representations, conditions and understandings between the parties, and supersedes and terminates all prior agreements and understandings between the parties, with respect to the subject matter hereof. There are no covenants, promises, agreements, warranties, representations, conditions or understandings, either oral or written, between the parties other than as set forth in this Agreement. No subsequent alteration, amendment, change or addition to this Agreement will be binding upon the parties unless reduced to writing and signed by the respective authorized officers of the parties. This Agreement will not be strictly construed against either party. Any conflict between the terms set forth in the text of this Agreement and the terms of any Appendix hereto will be resolved in favor of the text of this Agreement.

        16.8    Waiver.     Except as specifically provided for in this Agreement, the waiver from time to time by either of the parties of any rights or the failure to exercise any remedy will not operate or be construed as a continuing waiver of the same right or remedy or any of the other of such party's rights or remedies provided in this Agreement.

        16.9    Construction.     The term "Article" or "Section" can refer to any single paragraph level found in this Agreement or any collection of multiple paragraphs thereunder.

        16.10    No Third Party Beneficiaries.     No Third Party, including any employee of any party to this Agreement (except as specifically provided in this Agreement), will have or acquire any rights by reason of this Agreement. Nothing contained in this Agreement will be deemed to constitute the parties partners with each other or any Third Party.

        16.11    Notices.     Any notices or communications provided for in this Agreement to be made by either party to the other party must be in writing, in English, and will be made by prepaid air mail or overnight carrier with return receipt addressed to the other party at its address set forth below. Any

16



such notice or communication may also be given by hand, or facsimile to the appropriate designation. Notices will be sent:

If to Senomyx, to:   Senomyx, Inc.
11099 North Torrey Pines Road
La Jolla, CA 92037
Facsimile number: (858) 404-0750
Attention: Corporate Counsel with a copy to the President

If to Campbell, to:

 

Campbell Soup Company
Campbell Place
Camden, NJ 08103
Attn:
[***]
Fax:
[***]

 

 

With copy to:
Campbell Soup Company
Campbell Place
Camden, NJ 08103
Attn:Deputy General Counsel
Fax:
[***]

        By like notice, either party may specify or change an address to which notices and communications must be thereafter sent. Notices sent by mail, facsimile or overnight carrier will be effective upon receipt and notices given by hand will be effective when delivered.

        16.12    Assignment.     Notwithstanding any provision of this Agreement to the contrary, neither party may assign any of its rights or obligations under this Agreement in any country to any Third Party without the prior written consent of the non-assigning party, which consent will not be unreasonably withheld; provided, however, that either party may assign its rights and obligations under this Agreement without the consent of the other party (i) to a successor to substantially all of the business of such party to which this Agreement relates, whether by merger, sale of stock, sale of assets or other transaction or (ii) to any Affiliate. In the event of an assignment hereunder, the assignee will be entitled to the rights and privileges hereunder including the right to use the licenses and receive royalty payments; provided, however, the assignee's intellectual property rights (including know-how) are not included in the technology transferred under this Agreement. Notwithstanding the foregoing, any such assignment to an Affiliate will not relieve the assigning party of its responsibilities for performance of its obligations under this agreement. This Agreement will survive any merger or consolidation of either party with or into another party and no consent for any such merger, consolidation or similar reorganization will be required hereunder.

        16.13    Counterparts.     This Agreement may be executed in two or more counterparts, each of which will be deemed an original, but all of which together will constitute one and the same instrument.

17



        IN WITNESS WHEREOF, the parties, through their authorized officers, have executed this Agreement as of the Effective Date.

CAMPBELL SOUP COMPANY    

By:

 

/s/  
R. DAVID C. MACNAIR       
R. David C. Macnair

 

 

Title:

 

Vice President, Global R&D and QA


 

 

Date:

 

March 28, 2001


 

 

SENOMYX, INC.

 

 

By:

 

/s/  
PAUL A. GRAYSON       
Paul A. Grayson

 

 

Title:

 

President & CEO


 

 

Date:

 

March 28, 2001


 

 

18


COLLABORATIVE RESEARCH and LICENSE AGREEMENT

APPENDIX A—DEFINITIONS

        "Affiliate" means any corporation, company, partnership, joint venture, association or other entity, which directly or indirectly controls, is controlled by or is under common control with a party. As used in this definition, the term "control" means direct or indirect beneficial ownership of more than fifty percent (or such lesser percentage which is the maximum allowed to be owned by a foreign corporation in a particular jurisdiction) of the outstanding securities having voting rights for the election of directors in a corporation or of the comparable equity interest in any other type of entity.

        "Agreement" means this agreement, together with all appendices attached hereto, as it may be amended or supplemented from time to time hereafter by a written agreement executed by authorized representatives of both parties.

        " [***] .

        "Campbell Know-How" means, to the extent useful for purposes of the activities to be conducted under this Agreement, all Know-How Controlled by Campbell.

        "Campbell Patent Rights" means, to the extent useful for purposes of the activities to be conducted under this Agreement, all Patent Rights Controlled by Campbell, including, without limitation, any Patent Rights containing one or more claims to an Invention made solely by employees or agents of Campbell, but excluding any Joint Patent Rights.

        "Campbell Technology" means Campbell Patent Rights and Campbell Know-How.

        "Collaborative Period" means the period beginning on the Effective Date and ending upon the earlier of (i) the submission of a data package for GRAS determination or (ii) 36 months following the Effective Date, unless terminated earlier in accordance with Section 3.2 or 13.

        "Collaborative Program" means a research program during the Collaborative Period to discover molecules that enhance salty taste in the Field to be conducted pursuant to the Collaborative Protocol.

        "Collaborative Protocol" means the program for development of a Product conducted during the Term as provided in Appendix C.

        "Compound(s)" means molecules discovered in the course of the Collaborative Program that meets the criteria defined in the Collaborative Protocol.

        "Confidential Information" means all information, Inventions and Know-How disclosed by one party to the other party pursuant to this Agreement, including, without limitation, information and material (whether or not patentable) regarding technology, products, research, development, manufacturing, marketing, finances, personnel or other business information or objectives which is designated as confidential in writing by the disclosing party, whether by letter or by the use of an appropriate stamp or legend, prior to or at the time any such material, trade secret or other information is disclosed by the disclosing party to the other party. Notwithstanding the foregoing to the contrary, Inventions, Know-How or other information which is orally, electronically or visually disclosed by a party, or is disclosed in writing without an appropriate letter, stamp or legend, will constitute Confidential Information of a party if the disclosing party, within thirty days after such disclosure, delivers to the other party a written document or documents describing the Inventions, Know-How or other information and referencing the place and date of such oral, visual, electronic or written disclosure and the names of the persons to whom such disclosure was made.

        "Consumer Acceptance Testing" shall have the meaning set forth in the Collaborative Protocol incorporated into this Agreement by reference as Appendix C.

19



        "Consumer Panels" shall have the meaning set forth in the Collaborative Protocol incorporated into this Agreement by reference as Appendix C.

        "Control" or "Controlled" means, with respect to intellectual property, possession by a party, as of the Effective Date or during the Collaborative Period, of the ability to grant a license or sublicense in accordance with the terms of this Agreement, without violating the terms of any agreement by such party with any Third Party that is in effect on the Effective Date.

        "Effective Date" means the date that this Agreement is signed by the last party to sign below.

        "Field" means wet/liquid Soups [***] , including frozen Soups.

        "Invention" means any invention, including any new and useful process, method, or composition of matter, or improvement thereto, whether or not patentable, made in the course of the Collaborative Program.

        "Joint Invention" has the meaning set forth in Section 9.4.

        "Joint Patent Rights" means all Patent Rights containing one or more claims to a Joint Invention.

        "Know-How" means information and data, whether or not patentable, which is not generally known to the public, including, without limitation, designs, concepts, formulae, software, techniques, practices, processes, methods, knowledge, skill, experience, expertise, technical information, Materials and data, including pharmacological, toxicological and clinical test data, analytical and quality control data, patent and legal data or marketing, sales and manufacturing data.

        "Materials" mean antagonists, agonists, inhibitors, compounds, and chemicals, including without limitation, Compounds, Selected Compounds, and Product Compounds.

        "Net Sales" means, with respect to a Product or a New Product, the gross amount invoiced by Campbell and its Affiliates and/or permitted sublicensees on any sales or other transfer of the Product or New Product, less the following items:

        "Net Sales" will be determined from the books and records of Campbell, its Affiliates and/or its permitted sublicensees, maintained in accordance with United States generally accepted accounting principles.

        "New Product(s)" means any products in the Field, outside those listed on Appendix E, as amended from time to time by mutual agreement of the parties, that incorporate a Product Compound.

        "Patent Rights" means all rights associated with all U.S. or foreign (including regional authorities such as the European Patent Office) regular or provisional patents or patent applications, including any continuation, continuation-in-part, or division thereof or any substitute application therefor or equivalent thereof, and any patent issuing thereon, including any reissue, reexamination or extension thereof and any confirmation patent or registration patent or patent of additions based on any such patent.

20



        "Product(s)" means those Campbell products in the Field listed on Appendix E that incorporate [***] Product Compounds, which Appendix may be amended from time to time as the parties shall agree.

        "Product Compound(s)" means those Selected Compounds used by Campbell in Products.

        "Product Commercialization Plan" shall have the meaning provided under Section 3.3

        "Royalty Term" means, in the case of any Product or New Product and as to any [***] , the period of time commencing on the first commercial sale for use or consumption of such Product or New Product in such country and ending upon the earlier of: (i) the date that there no longer exists a Valid Claim in a Patent Right Controlled by Senomyx or its Affiliates covering the manufacture, use or sale of such Product or New Product [***] , or (ii) the date that is seventeen years after the date of such first commercial sale for use or consumption of such Product or New Product [***] .

        "Selected Compound(s)" means those Compound(s) selected by Campbell for development, which are subject to certain payment and diligence provisions.

        "Senomyx Know-How" means all Know-How related to the Collaborative Program, which is not covered by the Senomyx Patent Rights, but is necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which is Controlled by Senomyx as of the Effective Date or developed by Senomyx in the course of the Collaborative Program.

        "Senomyx Patent Rights" mean all Patent Rights that are necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which are Controlled by Senomyx as of the Effective Date or developed by Senomyx in the course of the Collaborative Program, but excluding any Joint Patent Rights.

        "Senomyx Technology" means the Senomyx Patent Rights, and Senomyx Know-How.

        "Soup(s)" means a food prepared from meat, poultry, fish, vegetables, grains, fruit and other ingredients, cooked in a liquid which may include visible pieces of some or all of these ingredients. It may be clear (as a broth) or thick (as a chowder), smooth, pureed or chunky, ready-to-serve, semi-condensed or condensed and may be served hot or cold, as a first course or as the main course of a meal or as a between meal snack (sipped like a beverage). Soup may be used as an ingredient for preparing other meal components and may range from broths (consommé) to sauces (cream or cheese-based soups).

        "Steering Committee" has the meaning set forth in Section 2.

        "Term" has the meaning set forth in Section 13.1.

        "Third Party(ies)" means any party other than a party to this Agreement or an Affiliate of Senomyx or Campbell.

        "Valid Claim" means an issued claim under an issued patent within the Patent Rights, which has not (i) expired or been canceled, (ii) been declared invalid by an unreversed and unappealable decision of a court or other appropriate body of competent jurisdiction, (iii) been admitted to be invalid or unenforceable through reissue, disclaimer or otherwise, and/or (iv) been abandoned.

21


COLLABORATIVE RESEARCH AGREEMENT

APPENDIX C

COLLABORATION PROTOCOL

COLLABORATIVE PERIOD—RESEARCH PHASE

Campbell's Responsibility

  Steering Committee Responsibility
  Senomyx Responsibility
A. Assign at least [***] representatives to the Steering Committee.   Steering Committee defined no later than [***] after the Effective Date of the Agreement.   Assign at least [***] representatives to the Steering Committee.
        Senomyx to share progress with Campbell on a [***].
Describe characteristics of desired [***], which shall conform to the requirements of [***] as further defined by the Steering Committee.   Steering Committee to meet [***] to review program and define next steps.   Establish [***].
    Within [***] of the Effective Date, the parties will provide additional detail to the [***].    
    Agree to [***].    

B.

 

 

 

Identify [***] target. Express in [***].
        Develop [***].

C.

 

 

 

Validate [***].
        Develop additional [***].
    Agree [***] developed and [***].    

D.

 

 

 

Acquire [***] believed to be [***]. Also, synthesize [***].
        Initiate [***]. Analyze results for optimization. Prepare [***]. Screen [***].
        Prepare [***] for selection.

E. Evaluate [***] for nomination as [***].

 

Select [***].

 

 

22


Campbell's Responsibility

  Steering Committee Responsibility
  Senomyx Responsibility
F.       Establish preliminary [***].
        Synthesize [***].
        Screen [***].
        Perform initial [***] for functional validation of [***].
        Initiate [***] that demonstrate [***].

G. Send to Senomyx [***].

 

Establish finished [***] for up to [***].

 

Prepare [***]. Perform [***] according to agreed protocol. Perform [***].
    Review [***] and confirm that all [***].   Prepare [***] of up to [***].

H.

 

Choose a [***]. Agree to [***].

 

Synthesize [***]. for additional testing and [***].
        Prepare [***]. Submit for [***].

I.

 

Review and agree to [***].

 

Receive [***]

DEVELOPMENT PHASE

Campbell's Responsibility

  Steering Committee Responsibility
  Senomyx Responsibility
J. Formulate [***] into initial [***]. Perform [***].   Review [***] results and define next steps.    

K. Define [***] in J. above.

 

Agree to [***] in J. above.

 

 
    Prepare [***], including analytical [***].    
Perform [***].        

COMMERCIALIZATION PHASE

Campbell's Responsibility

  Steering Committee Responsibility
  Senomyx Responsibility
L. Review and analyze [***].   Approve [***]. Finalize [***]. Agree to [***]   Review [***].
Prepare [***], including next [***].       Review [***].

23


Timeline Summary

Section

  Activity
  Estimated
Cumulative
Months

    RESEARCH PHASE    
A   Initiate the project.   [***]
    Assign Steering Committee representatives.    

B

 

Identify [***].

 

[***]
    Obtain [***].    

C

 

Validate [***].

 

[***]
    Develop additional [***].    
    Initiate [***].    

D

 

Identify optimized [***].

 

[***]
    Prepare and distribute [***].    

E

 

Review [***].

 

[***]
    Choose [***].    

F

 

Establish [***].

 

[***]
    Synthesize [***].    
    Initiate [***].    
    Perform [***].    

G

 

Initiate [***].

 

[***]
    Complete [***].    
    Review data.    

H

 

Select [***].

 

[***]
    Prepare material for [***].    
    Prepare [***].    
    Submit [***].    

I

 

Receive [***].

 

[***]
    Review [***].    

 

 

DEVELOPMENT PHASE

 

 

J

 

Formulate [***] containing [***].

 

[***]
    Perform [***].    
    Review [***] and define next steps.    

K

 

Prepare [***].

 

[***]
    Formulate [***].    
    Perform [***].    
    Review data.    

 

 

COMMERCIALIZATION PHASE

 

 

L

 

Review [***].

 

[***]
    [***].    
    Begin [***].    

24



COLLABORATIVE RESEARCH and LICENSE AGREEMENT

APPENDIX D

PRODUCT COMMERCIALIZATION PLAN

25



COLLABORATIVE RESEARCH and LICENSE AGREEMENT

APPENDIX E

CAMPBELL PRODUCTS*

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

Campbell's [***]

*Campbell Products on this list shall include all container types

26


***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.

FIRST AMENDMENT
TO THE COLLABORATIVE
RESEARCH AND LICENSE AGREEMENT
BETWEEN SENOMYX AND CAMPBELL

        THIS FIRST AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT (the " First Amendment ") is made by and between Senomyx, Inc. (" Senomyx "), a Delaware corporation, having a principal place of business at 11099 North Torrey Pines Road, La Jolla, California 92037, and Campbell Soup Company (" Campbell "), having its principal place of business at Campbell Place, Camden, NJ 08103-1799.

        WHEREAS, Senomyx and Campbell entered into that certain Collaborative Research and License Agreement dated March 28, 2001 (the " Agreement ") to collaborate in a research program to discover compounds that [***] (capitalized terms used but not otherwise defined in this First Amendment shall have the meanings given such terms in the Agreement); and

        WHEREAS, Senomyx and Campbell wish to amend the Agreement in the manner set forth in this First Amendment.

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree to amend the Agreement as follows:

        I.      Section 7.1 of the Agreement is hereby amended and restated in its entirety as follows:

        These payments are inclusive of overhead, labor, and supplies. These payments do not include (i) Campbell's costs associated with providing support for the collaboration; or (ii) the costs of any unanticipated materials as requested and agreed to by the parties. Additional funding, if any, will be proposed to the Steering Committee and agreed to in writing by the parties.

1


        II.      Section 8.1 of the Agreement is hereby amended to include Subsection 8.1(E) as follows:

        III.      Section 8.4 of the Agreement is hereby amended and restated in its entirety as follows:

        IV.     The following definitions of Appendix A of the Agreement are hereby included or amended and restated herein. All other definitions in the Agreement will remain unchanged.

        V.      Appendix E is hereby amended to include the following additional products. All other products on Appendix E will remain unchanged.

        VI.      Miscellaneous.

2


        IN WITNESS WHEREOF, the parties have executed this First Amendment effective as of July 26, 2002.

SENOMYX, INC.   CAMPBELL SOUP COMPANY

/s/  
PAUL A. GRAYSON       
Paul A. Grayson
Chairman and CEO

 

/s/  
DAVID C. MACNAIR       
David C. Macnair
VP—Global Research and Development

3


***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.

SECOND AMENDMENT
TO THE COLLABORATIVE
RESEARCH AND LICENSE AGREEMENT
BETWEEN SENOMYX AND CAMPBELL

        THIS SECOND AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT (the " Second Amendment ") is made by and between Senomyx, Inc. (" Senomyx "), a Delaware corporation, having a principal place of business at 11099 North Torrey Pines Road, La Jolla, CA 92037, and Campbell Soup Company (" Campbell "), having its principal place of business at Campbell Place, Camden, NJ 08103-1799.

        WHEREAS, Senomyx and Campbell entered into that certain Collaborative Research and License Agreement dated March 28, 2001 (the " Agreement ") to collaborate in a research program to discover compounds that [***] ; and

        WHEREAS, Senomyx and Campbell entered into that certain First Amendment to the Collaborative Research and License Agreement dated July 26, 2002 (the " First Amendment ") which provided for an option to amend the Agreement to [***] (capitalized terms used but not otherwise defined in this Second Amendment shall have the meanings given such terms in the Agreement, as amended); and

        WHEREAS, Senomyx and Campbell wish to amend the Agreement in the manner set forth in this Second Amendment.

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree to amend the Agreement as follows:

        I.      7.3 Royalty for Products. Campbell will pay to Senomyx the following earned royalties during the Royalty Term:

1


        II.     The following definitions of Appendix A of the Agreement are hereby amended and restated herein. All other definitions in the Agreement will remain unchanged.

        " Field 1 " means Soups [***] , including frozen Soups.

        " Field 2 " means Savory Beverages [***] .

        " Field " means the applicable Field 1 or Field 2, collectively.

        III.      Appendix E is hereby amended and restated in its entirety as the Amended Appendix E attached hereto and incorporated herein by reference.

        IV.      Miscellaneous.

        IN WITNESS WHEREOF, the parties have executed this Second Amendment effective as of November 5, 2002.

SENOMYX, INC.   CAMPBELL SOUP COMPANY

/s/  
PAUL A. GRAYSON       
Paul A. Grayson
Chairman and CEO

 

/s/  
DAVID C. MACNAIR       
David C. Macnair
VP—Global Research and Development

2


COLLABORATIVE RESEARCH and LICENSE AGREEMENT

AMENDED APPENDIX E

CAMPBELL PRODUCTS*

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

3


         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

         Campbell's [***]

         Campbell's [***]

         Campbell's [***]

*
Campbell Products on this list shall include all container types.

4


***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.

THIRD AMENDMENT
TO THE COLLABORATIVE
RESEARCH AND LICENSE AGREEMENT
BETWEEN SENOMYX AND CAMPBELL

        THIS THIRD AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT (the "Third Amendment") is made by and between Senomyx, Inc. ("Senomyx"), a Delaware corporation, having a principal place of business at 11099 North Torrey Pines Road, La Jolla, CA 92037, and Campbell Soup Company ("Campbell"), having its principal place of business at Campbell Place, Camden, NJ 08103-1799.

        WHEREAS, Senomyx and Campbell entered into that certain Collaborative Research and License Agreement dated March 28, 2001, as amended by that certain First Amendment dated July 26, 2002 and that Second Amendment dated November 5, 2002 (collectively, the "Agreement"), (capitalized terms used but not otherwise defined in this Third Amendment shall have the meanings given such terms in the Agreement); and

        WHEREAS, Senomyx and Campbell desire to amend the Agreement to extend the Collaborative Period in the manner set forth in this Third Amendment;

        NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree to amend the Agreement as follows:

        I.     The following definitions of Appendix A of the Agreement are hereby included or amended and restated herein. All other definitions in the Agreement will remain unchanged.

        "Collaborative Period" means the period beginning on the Effective Date and ending upon the earlier of (i) the submission of a data package for GRAS determination or (ii) March 28, 2006, unless terminated earlier in accordance with Section 3.2 or 13."

        "Go/No-Go Decision Date" means March 28, 2005."

        II.     Section 7.1 of the Agreement is hereby amended and restated in its entirety as follows:

        "Annual Research Support and Option.     Campbell will provide funding to Senomyx for research support totaling [***] for the first three (3) years, $1,800,000 for the fourth year and $1,200,000 for the fifth year. Additionally, Campbell will pay $1,800,000 for an Option, as set forth in Section 8.4(A), as amended ("Option Payment"). Research support and Option Payments will be used for the Collaborative Program and will be made by Campbell according to the following schedule:

         [***]

         [***]

         [***]

         [***]

         [***]

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         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

         [***]

        These payments are inclusive of overhead, labor, and supplies. These payments do not include (i) Campbell's costs associated with providing support for the collaboration; or (ii) the costs of any unanticipated materials as requested and agreed to by the parties. Additional funding, if any, will be proposed to the Steering Committee and agreed to in writing by the parties."

        III.     Section 13.2 of the Agreement is hereby amended and restated in its entirety as follows:

        IV.     The Timeline Summary section of Appendix C to the Agreement is hereby amended as provided in Exhibit A hereto.    The remainder of Appendix C shall remain unchanged.

        V.     Miscellaneous.

        IN WITNESS WHEREOF, the parties have executed this Third Amendment effective as of February 19, 2004.

SENOMYX, INC.   CAMPBELL SOUP COMPANY

/s/
KENT SNYDER
Kent Snyder
President & Chief Executive Officer

 

/s/
DAVID C. MACNAIR
David C. Macnair
VP—Global Research and Development

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Exhibit A
Updated Timeline

Section

  Activity
  Estimated
Cumulative
Months

  Updated
    RESEARCH PHASE        
A       Initiate the project.
Assign Steering Committee representatives.
  [***]    

B

 

 

 

Identify
[***] .
Obtain
[***] .

 

[***]

 

 

C

 

 

 

Validate
[***] .
Develop additional
[***] .
Initiate
[***] .

 

[***]

 

 

D

 

 

 

Identify optimized
[***] .
Prepare and distribute
[***] .

 

[***]

 

 

E

 

 

 

Review
[***] .
Choose
[***] .

 

[***]

 

 

F

 

 

 

Establish
[***] .
Synthesize
[***] .
Initiate
[***] .
Perform
[***] .

 

[***]

 

[***]

G

 

 

 

Initiate
[***] .
Complete
[***] .
Review data.

 

[***]

 

[***]

H

 

 

 

Select
[***] .
Prepare material for
[***] .
Prepare
[***] .
Submit
[***] .

 

[***]

 

[***]

I

 

 

 

Receive
[***] .
Review
[***] .

 

[***]

 

[***]

 

 

DEVELOPMENT PHASE

 

 

 

 
J       Formulate [***] containing [***] .
Perform
[***] .
Review
[***] and define next steps.
  [***]   [***]

K

 

 

 

Prepare
[***] .
Formulate
[***] .
Perform
[***] .
Review data.

 

[***]

 

[***]

 

 

COMMERCIALIZATION PHASE

 

 

 

 
L       Review [***] .
[***] .
Begin
[***] .
  [***]   [***]

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COLLABORATIVE RESEARCH AND LICENSE AGREEMENT BETWEEN SENOMYX, INC. AND CAMPBELL SOUP COMPANY
COLLABORATIVE RESEARCH and LICENSE AGREEMENT APPENDIX D PRODUCT COMMERCIALIZATION PLAN
COLLABORATIVE RESEARCH and LICENSE AGREEMENT APPENDIX E CAMPBELL PRODUCTS

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Exhibit 10.15

***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.


COLLABORATIVE RESEARCH
AND LICENSE AGREEMENT

BETWEEN

SENOMYX, INC.

AND

NESTEC Ltd.

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COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

        This Agreement is entered into as of the Effective Date by and between Senomyx, Inc., a Delaware Corporation having offices at 11099 North Torrey Pines Road, La Jolla, CA 92037 ("Senomyx") and NESTEC, Ltd., a Swiss company, having its principal place of business at Avenue Nestlé 55, CH-1800 Vevey, Switzerland ("Nestlé").

BACKGROUND

        Senomyx conducts research in the field of chemo sensation, an objective of which is to study potential biological targets and develop assays for use in the discovery and commercialization of products in taste and olfaction. Nestlé (together with its Affiliates) is in the business of developing, manufacturing, marketing and selling consumer products. Senomyx and Nestlé desire to collaborate in two research and development programs. One program is to discover compounds that enhance the [***] taste of products in defined fields. The other is to enhance the taste of [***] in defined fields.

        NOW, THEREFORE, in consideration of the foregoing promises and of the covenants, representations and agreements set forth below, the parties agree as follows:

THE AGREEMENT

1.     Definitions.     Certain terms set forth in this Agreement with initial capitals are defined in Appendix A, which is incorporated by reference.

2.     Steering Committees.     No later than ten days after the Effective Date, the parties will establish two joint steering committees, each of which will be made up of representatives from the parties (collectively the "Steering Committees") one Steering Committee shall be for the [***] Program and one Steering Committee shall be for the [***] Program. The Steering Committees will manage the Collaborative Programs and will (i) provide strategic direction and performance criteria for the Collaborative Programs; (ii) monitor progress and communicate status of the Collaborative Programs; (iii) facilitate the cooperation of the parties under the Collaborative Programs; (iv) will approve the achievement of milestones; and, (v) will continue to communicate following the Collaborative Period regarding the development and commercialization of Products. Each Steering Committee will consist of two representatives designated by Senomyx and two representatives designated by Nestlé. Each member of the Steering Committees will have one vote. The Steering Committees will first meet no later than thirty days after the Effective Date and at least four times per year during the Collaborative Period using mutually agreed upon meeting locations and formats including teleconferencing and videoconferencing. Each party shall bear its own expenses relating to the meetings and activities of the Steering Committees. During the Collaborative Period, Senomyx will promptly prepare and deliver to the members of the Steering Committees minutes of such meetings for review and approval of both parties. Decisions in each of the Steering Committees will be made by unanimous vote, at a meeting where all four voting representatives are present. Each member (or an authorized representative) of each of the Steering Committees must be represented at each meeting either in person, or by a mutually agreed upon format including teleconferencing and videoconferencing, for a quorum to be constituted. All unresolved disputes will be settled in accordance with Section 17.4, or as otherwise mutually agreed upon in writing.

3.     Collaborative Programs.     Senomyx will collaborate exclusively with Nestlé in the [***] Program and the [***] Program in the Relevant Categories.

        3.1    Research.     

        (A)  At each of the first Steering Committee meetings of the Collaborative Programs, the respective Steering Committee will review (i) the detailed scientific research plan for the [***] Program that defines the success of the [***] Program (the " [***] Research Plan"); and (ii) the

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detailed scientific research plan for the [***] Program that defines the success of the [***] Program (the " [***] Research Plan"). The Research Plans are attached as Appendix B and incorporated into the Agreement by reference. Both Research Plans will begin on the Effective Date and each will be completed upon the selection of the first Selected Compound for its respective Collaborative Program.

        (B)  During the Collaborative Period, Senomyx will perform the activities outlined in the Research Plans, including US Regulatory Approval and European Regulatory Approval using reasonable efforts, and the applicable resources provided under Section 7.1. Senomyx will prepare (i) a data package for [***] Compounds for the [***] Program; and (ii) a data package for [***] Compounds for the [***] Program, as the parties shall agree.

        (C)  During the Collaborative Period, Nestlé will use reasonable efforts to perform the activities in accordance with the Research Plans, including the evaluation of the data packages provided by Senomyx for Compounds as provided for under Section 3.1(B). Such evaluation by Nestlé shall not exceed [***] .

        (D)  During the Collaborative Period, the Steering Committees will each select the Selected Compounds for development after evaluation of the data packages by Nestlé, as provided for under Section 3(C), at the meeting of the applicable Steering Committee following the submission of the data packages as provided for under Section 3.1(B).

        3.2    Product Development.     Upon the completion of either US Regulatory Approval or European Regulatory Approval, Nestlé will use its reasonable endeavors to implement and complete a concept and products acceptance test within a period of [***] to ascertain the commercial potential of Products (e.g. product concept development, consumer testing etc). Upon completion of this process ("Decision Date"), Nestlé will decide in which of the Relevant Categories it wishes to commercialize Products and will notify the Steering Committee in writing of same. By the Decision Date and annually thereafter beginning the first day of the Calendar Year, Nestlé agrees to prepare and present to Senomyx a presentation which will include information relating to marketing concepts, strategy, estimated targets, certain available market research data, and projected Net Sales (only for each Relevant Category and not by individual product) to be submitted to Senomyx prior to the beginning of the Calendar Year (the "Product Marketing Report"). The Product Marketing Report will not be binding and neither Nestlé nor any of its Affiliates makes any warranty that any Net Sales projection in a Product Marketing Report will be achieved. The Steering Committee will meet as appropriate to review actual Net Sales and Product Marketing Report.

        If at the Decision Date, Nestlé decides not to commercialize any [***] Products in a Relevant Category the rights granted to Nestlé by Senomyx under Section 8.1(C) for [***] Products in such Relevant Category will terminate and revert back to Senomyx and Nestlé's obligations for such [***] Products in such Relevant Category shall be terminated. Likewise, if at the Decision Date, Nestlé decides not to commercialize any [***] Products in a Relevant Category the rights granted to Nestlé by Senomyx under Section 8.1(C) for [***] Products in such Relevant Category will terminate and revert back to Senomyx and Nestlé's obligations for such [***] Products in such Relevant Category shall be terminated. In addition, during the Collaborative Period if Nestlé requests to commercialize Products in a previously un-known application in the New Category or a Relevant Category, and rights to such application have not been granted by Senomyx to a Third Party, such application will be added to a Relevant Category for such Product for no additional funding under Section 7.1 or 7.2. After the Collaborative Period if Nestlé requests to commercialize Products in a previously un-known application in the New Category or a Relevant Category, and rights to such application have not been granted by Senomyx to a Third Party, such application will be added to a Relevant Category for such Product, and the royalties rates for the commercialization of such Products will be the royalty rates referred to in Clause 7.4(A). The parties will negotiate in good faith that additional funding, if any, to be paid by Nestlé and other commercial terms.

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        3.3    Responsibilities of Parties in Development Phase.     All regulatory filings made or filed by Senomyx for any Selected Compound will be owned exclusively by Senomyx and shall be subject to the license grant pursuant to Section 8. Senomyx shall be responsible for all costs associated with such regulatory filings; provided, however, notwithstanding Section 7.2(3), if costs to Senomyx associated for such regulatory approval exceed [***] , as documented by Senomyx, then the applicable Steering Committee will decide on the further obligations of the parties pursuant to this Section 3.3, then Nestlé will cooperate to the extent reasonably necessary to permit Senomyx to perform the foregoing activities.

4.     Collaboration with an Affiliate or Third Party.     During the Term, and without limitation to the grant of rights in Section 8, Senomyx will have the right to enter into collaborative programs with its Affiliates or with Third parties including, but not limited to, collaborative programs to discover compounds that enhance (i) the [***] taste of products outside the [***] Field; (ii) the taste of [***] and [***] in products outside the [***] Field; (iii) enhance the taste of molecules other than [***] within the [***] Field and [***] and [***] within the [***] Field. However, Senomyx shall notify Nestlé, in writing, prior to entering into a collaborative program with an Affiliate or with a Third party during the Collaborative Period for the discovery of compounds that enhance the [***] taste of products or to enhance the taste of [***] and [***] in products that are not described in the [***] Category, the [***] Category, the [***] Category, the [***] Category, or the [***] Category, of such program and products and if Nestlé does not have, at the time of such notification, plans to commercialize products that would fall under such program and products, Senomyx may enter into such program for such products. If Nestlé has such plans to commercialize products that would fall under such program and products, Nestlé shall notify Senomyx, within [***] of receipt of notification from Senomyx, and the parties will amend the Agreement to add such products to the appropriate Relevant Category.

5.     Law and Regulation.     The Compounds, Selected Compounds, Product Compounds and Materials provided by Senomyx under this Agreement must be used in compliance with all applicable laws and regulations, including, without limitation, all import and export laws and regulations.

6.     Reporting.     Each party will report to the other a written summary of results of research and development work it carries out, if any, under this Agreement within [***] Steering Committee meeting. Each party agrees to prepare and exchange written and electronic reports concerning any results and data that must be used by either party as supporting information for any regulatory filings. The exchange of such report may be reasonably supplemented, at the request of the party receiving a report, by correspondence and/or upon reasonable prior notice, during visits to the other party's facilities where activities referred to in the Research Plans are conducted.

7.     Financial Terms.     

        7.1    Annual Research Support.     Each year during the Collaborative Period, Nestlé will pay Senomyx $2,333,333 per year for the Collaborative Programs, [***] for the [***] Program and [***] for the [***] Program. The payments will be made in advance and on an equal quarterly basis. The first payment will be made within [***] following the Effective Date. These payments are inclusive of overhead, labor, and supplies. These payments do not include (i) Nestlé's costs associated with providing support for the collaboration; or (ii) the costs of any unanticipated materials as requested and agreed to by the parties. Additional funding, if any, will be proposed to the Steering Committees and agreed to in writing by the parties.

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        7.2    Milestone Payments.     Nestlé will pay Senomyx the following non-creditable, non-refundable milestone payments of USD [***] each within [***] of the occurrence of the following milestone events.

        7.3    Late Achievement of Milestones.     Where a Milestone referred to in Section 7.2 above is not achieved by the Milestone Deadline, then, except to the extent that any such non achievement of a milestone is caused by Nestlé or an unforeseeable event caused by a regulatory body, the milestone payments [***] .

        7.4    Royalty for Products.     Nestlé will pay to Senomyx the following earned royalties during the Royalty Term:

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        7.5     If at any time during the Royalty Term any other Third Party discovers and is able to commercialize a compound or material which enhances the [***] taste of products with application to products in either the [***] Field or the [***] Field and/or any Third Party rights come into existence over a Selected Compound, Nestlé has [***] .

        Any unsolved disputes regarding [***] will be settled in accordance with Section 17.4 or as otherwise mutually agreed upon in writing.

        7.6    Payment Terms.     The royalties due under Section 7 will be paid within [***] after the end of each quarter period of a Calendar Year in which such royalties are earned during the Royalty Term for each Product. With each such quarterly payment, Nestlé will furnish to Senomyx a royalty statement in sufficient detail to permit confirmation of the accuracy of the royalty payment made, which sets forth on a country-by-country basis the relevant sales information, including the total [***] of each such Product sold, [***] , the royalties payable in United States dollars, the method used to calculate the royalty, the exchange rate used and other information employed to calculate [***] for such Product.

        7.7    Currency of Payment.     All payments to be made under this Agreement, including the royalties payable to Senomyx by Nestlé, will be paid in Swiss Francs by wire transfer (or other means acceptable to Senomyx) to a bank account designated by Senomyx.

        7.8    Taxes Withheld.     Any income or other tax that Nestlé, or any of its Affiliates is required by a government agency to withhold and pay on behalf of Senomyx with respect to the royalties payable under this Agreement will be deducted from and offset against such royalties prior to remittance to Senomyx; provided, however, that in regard to any tax so deducted, Nestlé will give or cause to be given to Senomyx such assistance as may reasonably be necessary to enable Senomyx to claim exemption from or credit for the tax so deducted, and in each case will promptly furnish to Senomyx proper evidence of the taxes paid on Senomyx's behalf.

        7.9    Late Payment.     In the event that any payment, including royalty payments, due hereunder is not made when due, the payment will accrue interest from that date due at the rate of [***] ; provided, however, that in no event will such rate exceed the maximum legal annual interest rate. The payment of such interest will not limit Senomyx from exercising any other rights it may have as a consequence of the lateness of any payment.

        7.10    Records of Unit Sales, Net Sales and Royalty Calculations.     During the Royalty Term and for a period of three years thereafter, Nestlé will keep complete and accurate records of sales and all other information necessary to calculate [***] of each Product in sufficient detail to allow the accrued royalties to be determined accurately in accordance with International Accounting Standards (IAS) and to verify the royalty payments pursuant to Section 7.4. Senomyx, with reasonable written notice to Nestlé, will have the right to cause a nationally recognized independent, certified public accountant that is acceptable to both parties to audit such records at the place or places of business where such records are customarily kept in order to verify the accuracy of the reports of [***] and royalty payments. Such accountant must execute a confidentiality agreement prior to entering Nestlé's premises, obligating such

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accountant to keep all information disclosed to it confidential and will only be permitted to disclose to Senomyx the extent of any discrepancy between royalty payments made by Nestlé under this Agreement and the actual royalty required to be so paid. Senomyx will bear the reasonable cost of such audit unless such audit discloses a variance of more than [***] in Senomyx's favor from the amount of the royalties due under this Agreement, in which event, Nestlé will bear the reasonable cost of such audit. In all events, Nestlé will pay any underpayment with interest in accordance with Section 7.9. Senomyx agrees not to disclose Confidential Information concerning royalty payments reports, and all other information learned in the course of an audit or inspection, except to the extent necessary for Senomyx to enforce its rights under this Agreement or if disclosure is required by law.

8.     Grants.     Subject to the terms and conditions of this Agreement, Senomyx hereby grants to Nestlé and Nestlé hereby grants to Senomyx the following rights:

        8.1    Grant of Rights regarding Compounds, Selected Compounds and Products:     

        Subject to the terms and conditions of this Agreement, Senomyx hereby grants to Nestlé the following rights as of the later of thirty days after execution of this Agreement or of the expiration of the waiting period under the under the Hart Scott Rodino Act, if any notification and report under that Act is required:

        8.2    Limitations to Licenses.     Except as provided below, Nestlé may not sublicense its rights under Section 8 to Third Parties. Nestlé may sub-license its rights under Section 8 to Affiliates on the condition that Nestlé assumes the responsibility for the due performance by Affiliates under a sub-license of the obligations imposed upon Nestlé in the license under this Agreement. Nestlé agrees to be responsible for and to guarantee due payment of royalties on sales of Products containing Compounds by Affiliates.

        8.3     If Nestlé identifies any Nestlé Technology that may be relevant or useful for the research purposes under this Agreement, Senomyx may request a license of the relevant Nestlé Technology and Nestlé may in its sole discretion grant a license of the Nestlé Technology. Where Nestlé consents to a license in this Section 8.3, Nestlé will grant a fully paid, non-exclusive, non-transferable license to use the relevant Nestlé Technology for research purposes. For the avoidance of doubt this license will not include the right to sub-license unless Nestlé gives its consent, which may be withheld for any reason.

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9.     Ownership of Intellectual Property.

        9.1    Transfer of Rights.     Senomyx retains all rights in Senomyx Technology not expressly licensed or assigned in this Agreement. Except as otherwise expressly provided in this Agreement, nothing in this Agreement is intended to convey or transfer ownership or the grant of any license or sublicense by one party to the other party of any rights in any Confidential Information, Patent Rights or Know-How Controlled by a party.

        9.2    Senomyx Inventions.     Senomyx will own all Inventions and other Know-How made solely by its employees and agents and all Patent Rights claiming such Inventions and Know-How.

        9.3    Nestlé Inventions.     Nestlé will own all Inventions and other Know-How made solely by its employees and agents, and all Patent Rights claiming such Inventions and Know-How.

        9.4    Joint Inventions.     All Inventions conceived jointly by employees or agents of Senomyx and employees or agents of Nestlé (the "Joint Inventions") and all Joint Patent Rights will be owned jointly by Nestlé and Senomyx. United States intellectual property ownership laws will determine ownership of patentable inventions, including but not limited to, joint and several ownership for Joint Inventions. Nestlé hereby irrevocably assigns to Senomyx all interest in and to any Joint Inventions that consist of improvement to Senomyx Technology, Compounds, Product Compounds or Selected Compounds and uses thereof, and all Joint Patent Rights claiming such Joint Inventions, subject to the licenses granted to Nestlé under Section 8. In the event that Nestlé is legally unable to assign such rights to Senomyx, then Nestlé agrees either to waive the enforcement of such rights against Senomyx and any sublicensees and assignees, or to grant Senomyx an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights. Senomyx hereby irrevocably assigns to Nestlé all interest in and to any Joint Inventions that consist of improvement to Nestlé Technology and uses thereof, and all Joint Patent Rights claiming such Joint Inventions, subject to the licenses granted to Senomyx under Section 8. In the event that Senomyx is legally unable to assign such rights to Nestlé, then Senomyx agrees either to waive the enforcement of such rights against Nestlé and any sublicensees and assignees, or to grant Nestlé an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        9.5    Other Inventions.     Any Inventions not included in Sections 9.2, 9.3, or 9.4 will be owned by their inventors.

        9.6    Inventorship and Assignment.     United States patent law will determine inventorship of patentable inventions. Senomyx and Nestlé agree to execute all documentation necessary to perfect all assignments of Inventions, Know-How and Patent Rights contemplated in this Agreement.

        9.7    Markings.     Nestlé agrees where it is reasonable and practical to do so to mark and to cause any Affiliate or sublicensee to mark any Product (or their containers or labels) made, sold or otherwise disposed of by it or them with any notice of Patent Rights necessary or desirable under applicable law to enable the Senomyx Patent Rights or Joint Patent Rights, as applicable, to be enforced to their full extent in any country where Products are made used or sold. In addition, where it is reasonable and practical to do so, and where the parties have mutually agreed, Nestlé will mark and to cause any Affiliate or sublicensee to mark any Product (or their containers or labels) made, sold or otherwise disposed of by it or them with the trademark of Senomyx (the "Trademark"). Subject to the terms and conditions of the Agreement, Senomyx hereby grants to Nestlé a royalty free non-exclusive, nontransferable (except as permitted under Section 17.12) worldwide license to use the Trademark during the Term solely in connection with the marketing and sale of the Products; provided, however, that: (i) Nestlé must comply with all applicable laws and regulations with respect to the Trademark and must not do or suffer to be done any act or thing that would impair Senomyx's rights; and (ii) Nestlé agrees not to adopt or use any other trademark, words or symbol that features or includes the word Senomyx or any marks which are confusingly similar to the Trademark.

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10.   Treatment of Confidential Information; Publicity.

        10.1    Confidentiality.     Subject to the terms and conditions of this Agreement, Senomyx and Nestlé each agree that, during the Term and for a period of [***] thereafter, it will keep confidential, and will cause its Affiliates to keep confidential, all Confidential Information that is disclosed to it or to any of its Affiliates by the other party. Neither Senomyx nor Nestlé nor any of their respective Affiliates will use the other party's Confidential Information except as expressly permitted in this Agreement.

        10.2    Disclosure to Related Parties.     Senomyx and Nestlé each agree that any disclosure of the other party's Confidential Information to any officer, employee, contractor, consultant, sublicensee or agent of the other party or to any of its Affiliates will be made only if and to the extent necessary to carry out its responsibilities under this Agreement and to exercise the rights granted to it hereunder, will be limited to the extent consistent with such responsibilities and rights, and will be provided only to such persons or entities who are under an obligation of confidentiality no less stringent than as set forth in this Agreement. Each party will use reasonable efforts to take such action, and to cause its Affiliates to take such action, to preserve the confidentiality of each other's Confidential Information, which will be the same efforts as it would customarily take to preserve the confidentiality of its own Confidential Information.

        10.3    Return of Confidential Material Upon Termination.     Upon termination of this Agreement, each party, upon the other party's request, will return or destroy all Confidential Information received from the other party pursuant to this Agreement, including all copies and extracts of documents, within thirty days of the request of the other party; provided, however, one copy of the Confidential Information may be retained in a secure location with limited access for legal purposes only.

        10.4    Exceptions to Confidential Information.     Confidential Information will not include any information, which the receiving party can prove by competent written evidence:

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        A party may also disclose Confidential Information of the other party where required to do so by law or legal process; provided, however, that, in such event, the party required to disclose such information must give advance written notice of such disclosure to the other party and must cooperate with the other party's efforts to seek, at the request and expense of the other party, all confidential treatment and protection for such disclosure as is permitted by applicable law.

        10.5    Confidential Financial Information.     The parties agree that the material financial terms of this Agreement will be considered Confidential Information of both parties. Notwithstanding the foregoing, either party may disclose such terms in legal proceedings or as are required to be disclosed in its financial statements, by law, or under an obligation of confidentiality to bona fide potential sublicensees. Subject to prior written approval, either party will have the further right to disclose the material financial terms of this Agreement under an obligation of confidentiality to any potential acquirer, merger partner, bank, venture capital firm, or other financial institution to the extent necessary to obtain financing. Notwithstanding the foregoing, Senomyx will issue a press release to announce the execution of this Agreement and the material terms; provided, however, that such material terms shall be subject to the prior written consent of Nestlé. Thereafter, Nestlé and Senomyx may each disclose to Third Parties the information contained in such press release without the need for further approval by the other party.

        10.6    Confidential Research Information.     The parties agree that all results and data generated from the research by a party under the Collaborative Programs will be owned exclusively by that party and considered Confidential Information of that party subject to the confidentiality requirements of Section 10. Nestlé will not provide to a Third Party any Materials provided by Senomyx to Nestlé nor will Senomyx provide to a Third Party any Materials provided by Nestlé.

        10.7    Permitted Use and Disclosures.     Each party may use or disclose Confidential Information disclosed to it by the other party to the extent such information is included in the Nestlé Technology, Senomyx Technology or Joint Patent Rights, and to the extent such use or disclosure is reasonably necessary and permitted in the exercise of the rights granted hereunder in filing or prosecuting patent applications, prosecuting or defending litigation, complying with applicable governmental regulations, or court orders or otherwise submitting information to tax or other governmental authorities, conducting clinical trials, submitting information for food additive approval applications, or making a permitted sublicense or otherwise exercising rights expressly granted to the other party pursuant to the terms of this Agreement; provided, however, that if a party is required to make any such disclosure of the other party's Confidential Information, other than pursuant to a confidentiality agreement, it will give reasonable advance notice of such disclosure to the other party, and will request the prior approval of the other party (such approval not to be unreasonably withheld) Where any such disclosure of Confidential Information is approved, that party disclosing confidential information will disclose only the minimum necessary to comply with such requirements.

        10.8    Use of Data for Promotional Purposes.     Either party may (i) make public statements regarding Compounds, Selected Compounds, Product Compounds or Products by announcing the achievement of milestones, following consultation with the other party and with the prior written consent of the other party, and (ii) without the prior consent of the other party, make public statements regarding the overall success rate(s) achieved by and/or for its customers with the use of the Senomyx Technology; provided, however, that it may not disclose any chemical structures, screens or the other party's identity.

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        10.9    Publication of Results.     Subject to this Section 10, results and data obtained by either party in the course of the collaboration may be submitted for publication by Senomyx in accordance with Senomyx's customary practices. Senomyx will send a copy of the proposed publication to Nestlé and will allow Nestlé [***] from the date of receipt for review, and comment. Nestlé may, within such [***] period object to the proposed publication on the grounds that the publication contains Confidential Information in which case any such data determined in fact to be Confidential Information shall be removed from the publication before it is published.

        10.10    Publicity.     Except as required by law and as provided in this Section 10, neither party may make any public announcement or otherwise disclose the terms of this Agreement without the prior written consent of the other party, which consent will not be unreasonably withheld.

11.   Intellectual Property Enforcement and Defense of Claims.

        11.1    Intellectual Property Enforcement.     Subject to the Third Party obligations of Senomyx, each party will have the right, but not the obligation, to bring proceedings against any Third Party for the inappropriate use, including patent infringement, of Patent Rights solely Controlled by it, at its own risk and expense. If either party brings such an action, such party will be entitled to control such action, hire and retain counsel, make decisions, settle on any terms, and retain any and all awards or damages obtained in any such proceeding. At the request and expense of either party, the other party will give the requesting party all reasonable assistance required to file and conduct any such proceeding.

        11.2    Defense of Infringement Claims for Senomyx Technology.     Nestlé will cooperate with Senomyx, at Senomyx's expense, in the defense of any suit, action or proceeding against Nestlé or Senomyx or Senomyx's Affiliates alleging the infringement of the intellectual property rights of a Third Party by reason of Nestlé's or Senomyx's use of any Senomyx Technology licensed to Nestlé under this Agreement. The parties must notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. Nestlé will give to Senomyx full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding and Nestlé will execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

        11.3    Defense of Infringement Claims for Nestlé Technology.     Senomyx will cooperate with Nestlé, at Nestlé's expense, in the defense of any suit, action or proceeding against Senomyx or Nestlé alleging the infringement of the intellectual property rights of a Third Party by reason of Nestlé's or Senomyx's use of any Nestlé Technology licensed to Senomyx under this Agreement. The parties must notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. At the expense of Nestlé, Senomyx will give to Nestlé full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms any such suit, action or proceeding and Nestlé will execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

12.   Patent Prosecution and Maintenance.

        12.1    Prosecution of Patents.     Senomyx will be responsible for the payment of out-of-pocket costs and expenses Senomyx will incur in, filing, prosecuting (including an opposition or interference) and maintaining Senomyx Patents; provided, however, that Patents covering Product Compounds licensed by Senomyx to Nestlé for use within the [***] Field and the [***] Field, will be the responsibility of Nestlé and Senomyx, [***] . Nestlé will cooperate in the filing, prosecution and maintenance of Patents.

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        12.2    Inventions under Collaboration.     The control and expense of the filing, prosecution and maintenance of any Patent Rights or other intellectual property rights claiming Inventions that are not covered under section 12.1 will be as follows:

13.     Manufacturing.     The parties will collaborate to identify a manufacturer and/or enter into supply and manufacturing agreements with a mutually agreed upon Third Party(ies) regarding Product Compounds; provided however: (i) Senomyx will have the option to manufacture any such Product Compounds, subject to provisions of cost, quality and quantity and (ii) Nestlé may manufacture (or procure that an Affiliate or any Third Party may manufacture) Product Compounds where Nestlé can demonstrate that it, or any such Affiliate or Third Party can manufacture Product Compounds [***] .

14.   Term and Termination.

        14.1    Term.     The term of this Agreement will begin on the Effective Date and will continue through the end of the Royalty Term, unless terminated earlier in accordance with the provisions of Section 14.2, 14.3 or 14.4 (the "Term").

        14.2    Termination by Nestlé.     Nestlé will have the right to terminate this Agreement without cause at any time upon sixty days written notice, provided, however, if such termination occurs prior to the end of the Collaborative Period Nestlé must provide additional research funding in accordance with Section 7.1 for a period of [***] from the date of termination.

        14.3    Termination By Mutual Agreement.     The parties may terminate this Agreement at any time, in whole or in part, by mutual written agreement executed by both parties.

        14.4    Termination for Breach.     Either party has the right to terminate this Agreement at any time for a material breach of this Agreement by the other party, provided that the breaching party has not cured such breach within sixty days after written notice of the breach by the non-breaching party. The non-breaching party, upon termination of this Agreement, may seek actual or general damages and remedies available to it at law or in equity. NEITHER PARTY WILL SEEK PUNITIVE DAMAGES.

15.   Effect of Termination.

        15.1     Upon termination of this Agreement pursuant to Section 14, Nestlé will have no right to practice within or use of the Senomyx Technology, and all rights, title and interest in and to the Senomyx Technology will revert to and become the sole property of Senomyx, unless otherwise agreed upon in writing by the parties on or before the effective date of such termination. Nothing in this Section 15.1 prevents or limits Nestlé and its Affiliates from selling Products which at the date of termination have already been or are in the process of being manufactured.

        15.2     Expiration or termination of this Agreement will not relieve the parties of any obligation accruing prior to such expiration or termination.

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        15.3    Survival.     The obligations and rights of the parties under Sections 7.9, 9.1 through 9.7, 10, 15, 16.2(B), 16.3, 16.4(B), 16.5, 17, and Appendix A, will survive termination or expiration of this Agreement.

16.   Warranties and Indemnification.

        16.1    Mutual Representations and Warranties.     The parties make the following representations and warranties to each other:

        16.2    Warranties Regarding Senomyx Technology.     Senomyx warrants to Nestlé as of the Effective Date the following:

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        16.3    Senomyx Indemnification.     Senomyx hereby agrees to defend and indemnify Nestlé, and its respective officers, directors, employees, and agents (collectively, the "Nestlé Indemnitees") from and against all damages or other amounts payable to a Third Party, including reasonable attorneys' fees and costs of litigation, resulting from a claim, demand, action, suit or other proceeding brought or threatened by a Third Party against a Nestlé Indemnitee based on Senomyx's negligence, willful misconduct relating to Senomyx's performance, failure to perform or breach under this Agreement including a breach of warranty. SENOMYX WILL NOT BE LIABLE FOR ANY INCIDENTAL OR CONSEQUENTIAL DAMAGES SUFFERED BY NESTLÉ RESULTING FROM THIS AGREEMENT UNLESS RESULTING SOLELY FROM THE ACTION OR INACTION OF SENOMYX.

        16.4    Nestlé Indemnification of Senomyx.     Nestlé hereby agrees to indemnify, defend and hold Senomyx, and its respective officers, directors, employees and agents (collectively, the "Senomyx Indemnitees") harmless from and against all damages, losses, liabilities, expenses and costs or other amounts payable to a Third Party, including reasonable attorneys' fees and costs of litigation, resulting from a claim, demand, action, suit or other proceeding brought or threatened by a Third Party against a Senomyx Indemnitee based on (i) any development, manufacture, use, handling, storage, sale, or other disposition of a Selected Compound, Product Compound by or through Nestlé or its Affiliates or its permitted sublicensees (ii) a product liability claim on any Product using the Product Compound (iii) the practice by Nestlé of any license granted hereunder, or (iv) infringement by Nestlé of Patent Rights of any Third Party; except to the extent such damages or other amounts payable are attributable to: (a) the development, manufacture or formulation, of a Selected Compound conducted solely by a Senomyx Indemnitee; (b) the development, manufacture or formulation of Product Compound conducted solely by a Senomyx Indemnitee: or (c) the development, manufacture or formulation of Product conducted solely by a Senomyx; (d) a violation of any contractual or fiduciary duty owed by any Senomyx Indemnitee to a Third Party, (e) any breach of this Agreement by a Senomyx Indemnitee or a misrepresentation by Senomyx in this Agreement, or (f) trade secret misappropriation or patent infringement by a Senomyx Indemnitee covered by a Third Party's Patent Rights. IN NO EVENT WILL NESTLÉ BE LIABLE FOR ANY INCIDENTAL OR CONSEQUENTIAL DAMAGES SUFFERED BY SENOMYX RESULTING FROM THE EXERCISE OF ANY RIGHTS GRANTED IN ACCORDANCE WITH THIS AGREEMENT UNLESS RESULTING SOLELY FROM THE ACTION OR INACTION OF NESTLE.

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17.   Miscellaneous.

        17.1    Force Majeure.     Neither party will lose any rights hereunder or be liable to the other party for damages or losses on account of failure of performance by the defaulting party (other than a payment default) if the failure is occasioned by war, fire, explosion, flood, (e.g. El Niño), earthquake, strike, lockout, embargo, act of God, or any other similar cause beyond the control of the defaulting party; provided, however, that the party claiming force majeure has exerted all reasonable efforts to avoid or remedy such force majeure and thereafter takes all reasonable steps to mitigate any such delay in performance hereunder and any damages that may be incurred by the other party thereby.

        17.2    Governing Law and Jurisdiction.     This Agreement will be governed by the laws of California, U.S.A., as such laws are applied to contracts entered into and to be performed entirely within such state.

        17.3    Binding Effect.     This Agreement will be binding upon and inure to the benefit of the successors and permitted assigns of the parties. Any assignment not in accordance with this Agreement will be void.

        17.4    Dispute Resolution.     The parties recognize that disputes as to certain matters may from time to time arise during the Term, which relate to either party's rights and/or obligations hereunder ("Disputes"). It is the objective of the parties to establish procedures to facilitate the resolution of Disputes arising under this Agreement in an expedient manner by mutual cooperation and negotiation. The parties agree that prior to any arbitration concerning this Agreement, Senomyx's [***] and [***] from Nestlé's will meet in person or by video-conferencing in a good faith effort to resolve any disputes concerning this Agreement. Within [***] of a formal request by either party to the other party, either party may, by written notice to the other party, have such dispute referred to their respective officers designated or their successors, for attempted resolution by good faith negotiations, such good faith negotiations to begin within [***] after such notice is received. If the Dispute is not settled by negotiations as described above, within [***] of the receipt by one party of the notice from the other party requesting such negotiations, then the parties shall attempt to settle the Dispute by mediation in accordance with the Model Mediation Procedure of the Centre for Dispute Resolution, Princes House, 95 Gresham Street, London EC2V 7NA 7 ("CEDR"). To initiate a Mediation, a party must give notice in writing ("ADR Notice") to the other party requesting Mediation in accordance with CEDR Rules. The Mediation shall be held at a venue or venues in London, England, agreed by the parties or, in default of agreement, selected by CEDR. If there is any point on the conduct of the Mediation (including the nomination of the Mediator) upon which the parties cannot agree within [***] from the date of the ADR Notice, CEDR will, at the written request of a party, decide that point for the parties, having consulted with them. The Mediation will start no later than [***] after the date of the ADR Notice. If the parties have not settled the Dispute within [***] of the date of the ADR Notice then the Dispute shall be exclusively and finally settled between the parties or the designated officers of the parties pursuant to this Section 17.4 will be resolved by final and binding arbitration under the Rules of Conciliation and Arbitration of the International Chamber of Commerce (hereinafter referred to as "the ICC") conducted in London, United Kingdom (unless the parties mutually agree to another location) The arbitration will be conducted by three arbitrators who are knowledgeable in the subject matter at issue in the dispute. Senomyx will select one arbitrator, and one arbitrator will be selected by Nestlé. The third arbitrator will be selected by mutual agreement of the two arbitrators selected by the parties. In conducting the arbitration, the arbitrators will (i) determine what discovery will be permitted, consistent with the goal of limiting the cost and time which the parties must expend for discovery (and provided that the arbitrators will permit such discovery they deem necessary to permit an equitable resolution of the dispute), (ii) ensure that the total time of the arbitration from filing to a final decision or executed settlement agreement is less than [***] , and (iii) be able to decree any and all relief of an equitable nature, including, but not limited to, such relief as a temporary restraining order, a preliminary injunction, a permanent injunction, specific performance or repletion of property.

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The arbitrators will also be able to award actual or general damages, but will not award any other form of damage (e.g., consequential, punitive or exemplary damages). The parties will share equally the arbitrator's fees and expenses pending the resolution of the arbitration. The decision of the arbitrators will be final and binding on the parties and may be sued on or enforced by the party in whose favor it runs in any court of competent jurisdiction at the option of such party. Notwithstanding anything to the contrary in this Section 17.4, either party may seek immediate injunctive or other interim relief from any court of competent jurisdiction with respect to any breach of Sections 9 or 10, or otherwise to enforce and protect the Patent Rights, copyrights, trademarks, or other intellectual property rights Controlled by such party. In addition, arbitration will not be used to resolve disputes concerning Patent Rights. Disputes concerning Patent Rights, including, but not limited to, disputes concerning patent ownership, claim language, claim scope and issues of validity will be settled in a court of law. Any arbitration ruling that relies on an interpretation of Patent Rights will have no binding effect in a court of law on any Patent Rights related to this Agreement, unless such Patent Rights have been adjudicated in a court of law. In no event will a demand for arbitration be made after the date when the institution of a legal or equitable proceeding based on such claim, dispute or other matter in question would be barred by the applicable statute of limitations. Notwithstanding the foregoing or the outcome of the arbitration proceeding, each party shall bear its own expenses including, without limitation, attorneys fees and court costs, even if the arbitrators have the discretion to award such fees and costs to the prevailing party. We are continuing to review this section, thus, we reserve the right to change at a later date.

        17.5    Severability.     If any term, covenant or condition of this Agreement or the application of it to any party or circumstance is, to any extent, held to be invalid or unenforceable, then the remainder of this Agreement, or the application of such term, covenant or condition to parties or circumstances other than those as to which it is held invalid or unenforceable, will not be affected thereby and each term, covenant or condition of this Agreement will be valid and enforced to the fullest extent permitted by law; the parties covenant and agree to renegotiate any such term, covenant or condition or the application of them in good faith in order to provide a reasonably acceptable alternative to the term, covenant or condition of this Agreement or the application of them that is invalid or unenforceable, it being the intent of the parties that the basic purposes of this Agreement are to be effectuated.

        17.6    Independent Contractors.     It is expressly agreed that Nestlé and Senomyx will be independent contractors and that the relationship between the parties will not constitute a partnership or agency of any kind. Neither Nestlé nor Senomyx will have the authority to make any statements, representations or commitments of any kind, or to take any action, which will be binding on the other party, without the prior written authorization of the other party to do so.

        17.7    Entire Agreement; Amendment.     This Agreement sets forth all of the covenants, promises, agreements, warranties, representations, conditions and understandings between the parties, and supersedes and terminates all prior agreements and understandings between the parties, with respect to the subject matter of this Agreement. There are no covenants, promises, agreements, warranties, representations, conditions or understandings, either oral or written, between the parties other than as set forth in this Agreement. No subsequent alteration, amendment, change or addition to this Agreement will be binding upon the parties unless reduced to writing and signed by the respective authorized officers of the parties. This Agreement will not be strictly construed against either party. Any conflict between the terms set forth in the text of this Agreement and the terms of any Appendix will be resolved in favor of the text of this Agreement.

        17.8    Waiver.     Except as specifically provided for in this Agreement, the waiver from time to time by either of the parties of any rights or the failure to exercise any remedy will not operate or be construed as a continuing waiver of the same right or remedy or any of the other of such party's rights or remedies provided in this Agreement.

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        17.9    Construction.     The term "Article" or "Section" can refer to any single paragraph level found in this Agreement or any collection of multiple paragraphs under them.

        17.10    No Third Party Beneficiaries.     No Third Party, including any employee of any party to this Agreement (except as specifically provided in this Agreement), will have or acquire any rights by reason of this Agreement. Nothing contained in this Agreement will be deemed to constitute the parties partners with each other or any Third Party.

        17.11    Notices.     Any notices or communications provided for in this Agreement to be made by either party to the other party must be in writing, in English, and will be made by prepaid air mail or overnight carrier with return receipt addressed to the other party at its address set forth below. Any such notice or communication may also be given by hand, or facsimile to the appropriate designation. Notices will be sent:

  If to Senomyx, to:   Senomyx, Inc.
11099 North Torrey Pines Road
La Jolla, CA 92037
Facsimile number: (858) 404-0750
Attention: Corporate Counsel
with a copy to the President

 

If to Nestlé, to:

 

Nestlé S.A..
Avenue Nestlé
CH-1800
Vevey, Switzerland
Facsimile number: +41 21 921 1885
Attention: Vice President, Head of Research and Development with a copy to Executive Vice President Corporate Technical, Production and Research and Development

        By like notice, either party may specify or change an address to which notices and communications must be thereafter sent. Notices sent by mail, facsimile or overnight carrier will be effective upon receipt and notices given by hand will be effective when delivered.

        17.12    Assignment.     Notwithstanding any provision of this Agreement to the contrary, neither party may assign any of its rights or obligations under this Agreement in any country to any Third Party without the prior written consent of the non-assigning party, which consent will not be unreasonably withheld; provided, however, that either party may assign its rights and obligations under this Agreement without the consent of the other party (i) to a successor to substantially all of the business of such party to which this Agreement relates, whether by merger, sale of stock, sale of assets or other transaction or (ii) to any Affiliate. In the event of such transaction, however, intellectual property rights (including Know-How) of a party to such transaction other than one of the parties to this Agreement will not be included in the technology licensed under this Agreement. Notwithstanding the foregoing, any such assignment to an Affiliate will not relieve the assigning party of its responsibilities for performance of its obligations under this agreement. This Agreement will survive any merger or consolidation of either party with or into another party and no consent for any such merger, consolidation or similar reorganization will be required hereunder.

        17.13    Counterparts.     This Agreement may be executed in two or more counterparts, each of which will be deemed an original, but all of which together will constitute one and the same instrument.

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        IN WITNESS WHEREOF, the parties, through their authorized officers, have executed this Agreement as of the Effective Date.

NESTEC LTD.

By:

 

/s/ [Text Illegible]


 

 

Title:

 

Vice President


 

 

Date:

 

18 th April, 2002


 

 

SENOMYX, INC.

By:

 

/s/
PAUL A. GRAYSON

 

 

Title:

 

Chairman and CEO


 

 

Date:

 

18 th April, 2002


 

 

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COLLABORATIVE RESEARCH AGREEMENT

APPENDIX A—DEFINITIONS

        " Affiliate " means any corporation, company, partnership, joint venture, association or other entity, which directly or indirectly controls, is controlled by or is under common control with a party. As used in this definition, the term "control" means direct or indirect beneficial ownership of more than fifty percent (or such lesser percentage which is the maximum allowed to be owned by a foreign corporation in a particular jurisdiction) of the outstanding securities having voting rights for the election of directors in a corporation or of the comparable equity interest in any other type of entity.

        " Agreement " means this agreement, together with all appendices attached to it, as it may be amended or supplemented from time to time hereafter by a written agreement executed by authorized representatives of both parties.

        " [***] Category " means [***] Wet Soup Category, [***] Dehydrated and Culinary Category.

        " Calendar Year " means a twelve-month period beginning on January 1 st and ending on December 31 st .

        " Collaborative Period " means the period beginning on the Effective Date and ending 36 months thereafter, unless earlier terminated in accordance with Section 14.

        " Collaborative Programs " means the [***] Program and the [***] Program. Each Collaborative Program may be referred to nonspecifically as "Collaborative Program".

        " Collaborative Protocols " has the meaning set forth in Section 3.1.

        " Compound(s) " means molecules synthesized or acquired in the course of the Collaborative Program wherein such molecules provide the desired enhancement and can be produced at or less than the Maximum Compound Cost.

        " Confidential Information " means all information, Inventions and Know-How disclosed by one party to the other party pursuant to this Agreement, including, without limitation, information and material (whether or not patentable) regarding technology, products, research, development, manufacturing, marketing, finances, personnel or other business information or objectives. Notwithstanding the foregoing to the contrary, Inventions, Know-How or other information which is orally, electronically or visually disclosed by a party, will constitute Confidential Information of a party if the disclosing party, within thirty days after such disclosure, delivers to the other party a written document or documents describing the Inventions, Know-How or other information and referencing the place and date of such oral, visual, electronic or written disclosure and the names of the persons to whom such disclosure was made.

        " Control " or " Controlled " means, with respect to intellectual property, possession by a party, as of the Effective Date or during the Collaborative Period, of the ability to grant a license or sublicense in accordance with the terms of this Agreement, without violating the terms of any agreement by such party with any Third Party that is in effect on the Effective Date.

        " Dehydrated and Culinary Food Category " means:

provided, however, that the Dehydrated and Culinary Food Category does not include any soup denominated products described in the Wet Soup Category.

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        " Effective Date " means the date that this Agreement is signed by the last party to sign below.

        " [***] Regulatory Approval " means regulatory approval by a relevant regulatory body in at least one of the following countries of the [***] .

        " Frozen Food Category " means [***] .

        " [***] " means a " [***], " as determined by an expert panel qualified in accordance with the [***] guidelines or as determined by a regulatory authority.

        " Invention " means any invention, including any new and useful process, method, or composition of matter, or improvement, whether or not patentable, made in the course of the Collaborative Programs.

        " Joint Invention " has the meaning set forth in Section 9.4.

        " Joint Patent Rights " means all Patent Rights containing one or more claims to a Joint Invention.

        " Know-How " means information and data, whether or not patentable, which is not generally known to the public, including, without limitation, designs, concepts, formulae, software, techniques, practices, processes, methods, knowledge, skill, experience, expertise, technical information, Materials and data, including pharmacological, toxicological and clinical test data, analytical and quality control data, patent and legal data or marketing, sales and manufacturing data.

        " Materials " mean antagonists, agonists, inhibitors, compounds, and chemicals, including without limitation, Compounds, Selected Compounds, and Product Compounds.

        " Maximum Compound Cost " means [***] .

        " Nestlé Know-How " means, to the extent useful for purposes of the activities to be conducted under this Agreement, Know-How, including compounds Controlled by Nestlé.

        " Nestlé Patent Rights " means, to the extent useful for purposes of the activities to be conducted under this Agreement, Patent Rights Controlled by Nestlé, including, without limitation, any Patent Rights containing one or more claims to an Invention made solely by employees or agents of Nestlé, but excluding any Joint Patent Rights.

        " Nestlé Technology " means Nestlé Patent Rights and Nestlé Know-How.

        " [***] " means, with respect to a Product, the [***] of any sales or any other transfer by Nestlé and its Affiliates and/or permitted sublicensees, less the following items:

[***] will be determined from the books and records of Nestlé, its Affiliates and/or its permitted sublicensees, maintained in accordance with IAS.

        " New Category " means products other than those products currently known and available to consumers in the the [***] Category, Frozen Food Category, the Wet Soup Category, the Dehydrated and Culinary Food Category, and the [***] Category. (This may also include unknown products such as [***] ).

        " Patents " means all patent and patent applications which are controlled by Senomyx as of the effective date or developed by Senomyx in the course of the Collaborative Period under either of the Research Plans which specifically claim a Product Compound(s), a process for manufacturing a Product Compound (s) , or the use of a Product Compound (s) in a Product.

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        " Patent Rights " means all rights associated with all U.S. or foreign (including regional authorities such as the European Patent Office) regular or provisional patents or patent applications, including any continuation, continuation-in-part, or division of it or any substitute application for it or equivalent of it, and any patent issuing upon it, including any reissue, reexamination or extension of it and any confirmation patent or registration patent or patent of additions based on any such patent.

        " Previous Year " means the Calendar Year immediately preceding the current Calendar Year.

        " Product(s) " means [***] Product(s) and [***] Product(s). [***] Products and [***] Products may be referred to nonspecifically as "Products".

        " Product Compound(s) " means [***] Compounds(s) and [***] Compounds(s). [***] Compounds and [***] Compounds may be referred to nonspecifically as "Product Compounds".

        " Relevant Category " means the Frozen Food Category, or the Dehydrated and Culinary Food Category, or the Wet Soup Category for [***] Products and the Frozen Food Category, or the Dehydrated and Culinary Food Category for [***] Products.

        " Research Plans " means the [***] Research Plan and the [***] Plan. The [***] Research Plan and the [***] Research Plan may be referred to nonspecifically as "Research Plan".

        " Royalty Term " means, in the case of any Product and as to any country, the period of time commencing on the first commercial sale for use or consumption of such Product in such country and ending upon the earlier of: (i) the date that there no longer exists a Valid Claim in a Patent Right Controlled by Senomyx or its Affiliates covering the manufacture, use or sale of such Product in such country, or (ii) the date that is seventeen years after the date of such first commercial sale for use or consumption of such Product in such country PROVIDED THAT the seventeen year period is within the period in which there exists a Valid Claim in a Patent Right controlled by Senomyx or its Affiliates in another country.

        " [***] Compound(s) " means a Selected Compound discovered and developed under the [***] Program.

        " [***] Field " means products in the Dehydrated and Culinary Food Category and the Frozen Food Category and specifically excludes the Wet Soup Category, the [***] Category, the [***] Category and the New Category, except as provided for in Section 3.2. The [***] Field does not include [***] .

        " [***] Product(s) " means a Nestlé product(s) for [***] consumption that incorporates a [***] Compound.

        " [***] Program " means a research and development program during the Collaborative Period to discover molecules that enhance the taste of [***] to be conducted pursuant to the [***] Research Plan.

        " Selected Compound(s) " means the Compound(s) selected by the Steering Committee for development.

        " Senomyx Know-How " means all Know-How related to Compounds discovered under the Collaborative Programs, which is not covered by the Senomyx Patent Rights, but is necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which is Controlled by Senomyx as of the Effective Date or developed by Senomyx in the course of the Collaborative Programs.

        " Senomyx Patent Rights " mean all composition of matter and use Patent Rights covering Compounds discovered under the Collaborative Programs that are necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which are Controlled by Senomyx

22



as of the Effective Date or developed by Senomyx in the course of the Collaborative Programs, but excluding any Joint Patent Rights.

        " Senomyx Technology " means the Senomyx Patent Rights, and Senomyx Know-How.

        " [***] Category " means [***] .

        " Steering Committees " has the meaning set forth in Section 2. The Steering Committees will be referred to individually as a "Steering Committee".

        " Term " has the meaning set forth in Section 14.1.

        " Third Party(ies) " means any party other than a party to this Agreement or an Affiliate of Senomyx or Nestlé.

        " [***] Compound(s) " means a Selected Compound discovered and developed under the [***] Program.

        " [***] Field " means the Dehydrated and Culinary Food Category, the Frozen Food Category, and the Wet Soup Category and specifically excludes the [***] Category, the [***] Category, and the New Category, except as provided for under Section 3.2. The [***] Field does not include [***] .

        " [***] Product(s) " means a Nestlé product(s) for human consumption that incorporates an [***] Compound.

        " [***] Program " means a research and development program during the Collaborative Period to discover molecules that enhance the taste of [***] . The [***] Program is to be conducted pursuant to the [***] Research Plan.

        " [***] Regulatory Approval " means any of the following regulatory approvals in the [***] : (i)  [***] determination by the [***] determine that a product or ingredient is an acceptable food additive or [***] Approval means any one of them.

        " Wet Soup Category " means [***] .

        " Valid Claim " means an issued claim under an issued patent within the Patent Rights, which has not (i) expired or been canceled, (ii) been declared invalid by an unreversed and unappealable decision of a court or other appropriate body of competent jurisdiction, (iii) been admitted to be invalid or unenforceable through reissue, disclaimer or otherwise, and/or (iv) been abandoned.

23


COLLABORATIVE RESEARCH AGREEMENT

APPENDIX B

RESEARCH PLANS

[***] Program Research and Development Plan

Nestlé
Responsibility

  Steering Committee
Responsibility

  Senomyx Responsibility
  Cumulative Time
(months)

Assigns [***] representatives to the Steering Committee.       Assigns [***] representatives to the Steering Committee.   Within [***] of the Effective Date
    First Steering Committee meeting is held.
  
Steering Committee to review, amend and approve [***].
  Senomyx presents [***].   Within [***] of the Effective Date
Describes general [***].       Senomyx will apply information on [***].   [***]
    Steering Committee meeting is held.        
    The methods to measure [***] are agreed to.       [***]
    Steering Committee meeting is held.   Senomyx to share [***].   [***]
    Steering Committee meeting is held.
  
Reviews [***].
  A validated [***].
  
Initiate [***].
Expected [***].
  [***]
        [***] for additional desired [***] are developed as defined by the Steering Committee.   [***]
        [***].
 
[***] results are used to [***] to identify [***].
 
For certain [***] will be generated and the [***] will be determined.
  [***]
        Activity on [***] are stored in a [***] to identify most [***].   [***]
             

24


    Steering Committee meeting is held.       [***]
        Senomyx [***] evaluates a set of [***] will determine the [***] and the maximal levels [***].   [***]
    Steering Committee meeting is held.       [***]
Nestlé to participate in [***].   Defines and agrees to [***].   Senomyx performs [***] performed by an [***].
 
Perform [***].
  [***]
    Steering Committee meeting is held.
  
Review [***] and verifies [***] criteria are achieved, the Steering Committee approves [***].
  Expected [***]. Senomyx informs Steering Committee of [***].   [***]
Provides Senomyx with [***].
 
Works with Senomyx to prepare [***].
 
Participates in [***].
  Defines and agrees to [***].
  
If desired, coordinate [***].
  Prepares [***].
  
Performs [***] Senomyx according to agreed protocol.
  
Performs [***].
  [***]
Nestlé reviews [***].
Nestlé has up to [***] to determine if a [***].
  Steering Committee meeting is held   Identify [***] that best meet [***].
  
Prepares first [***]. Submits [***] to Nestlé.
  [***]
        Initiates [***] can be initiated prior to selecting [***].    
Nominates a [***].   Steering Committee meeting is held.
  
Agrees to the [***].
  
Agrees to the [***].
  Reviews [***] with Nestlé.
 
Senomyx initiates [***].
 
Expected [***].
  [***]
 
[***]
    Establishes desired [***].   Continue to [***] and evaluate in the [***]   [***]
             

25


    Steering Committee meeting is held.   Senomyx to [***] to coordinate and/or perform the [***].
 
Senomyx to [***] to initiate [***].
  
Senomyx will initiate [***] no later than upon [***].
  [***]
        Senomyx is responsible for [***].   [***]
    Investigate [***].       [***]
    Steering Committee meeting is held.   Senomyx discusses [***].   [***]
    Steering Committee is held.   Senomyx discusses [***].   [***]
Nestlé will [***].           [***]
    Steering Committee meeting is held. Reviews [***].   [***].   [***]
        Submits [***].   [***]
    Steering Committee meeting is held.   Receives [***].   [***]
Nestlé will [***] to implement and complete a [***].   Steering Committee approves [***].   Expected [***].   No later than [***] following [***]

26


[***] Program Research and Development Plan

Nestlé
Responsibility

  Steering Committee
Responsibility

  Senomyx Responsibility
  Cumulative Time
(months)

Assigns [***] representatives to the Steering Committee.       Assigns [***] representatives to the Steering Committee.   Within [***] of the Effective Date
    First Steering Committee meeting is held.
  
Steering Committee to review, amend and approve [***].
  Senomyx presents [***].   Within [***] of the Effective Date
Describes general [***].       Senomyx will apply information on [***].   [***]
    Steering Committee meeting is held.
 
The methods to measure [***] are agreed to.
      [***]
        [***]    
        [***] results are used to [***] to identify [***].   [***]
        [***] showing [***] that act on [***] will be generated and the [***] will be determined.   [***]
        [***] for additional desired [***] as defined by the Steering Committee.   [***]
        Activity on [***] are stored in a [***] to identify most [***].   [***]
    Steering Committee meeting is held.   Senomyx shares [***].   [***]
        Senomyx [***] to evaluates a set of [***] will determine the [***] and the maximal levels to be [***].   [***]
Nestlé to participate in [***].   Defines and agrees to [***].   Senomyx to perform [***] or have the [***] by an outside [***].   [***]
             

27


    Steering Committee meeting is held.
 
Review [***] and verifies [***] are achieved, the Steering Committee approves [***].
  Senomyx to share [***].
 
Expected [***]. Senomyx informs Steering Committee of [***].
  [***]
    Steering Committee meeting is held.       [***]
        Senomyx continues to [***] to improve [***]   [***]
    Steering Committee meeting is held.       [***]
        Perform [***].   [***]
Provides Senomyx with [***].
  
Works with Senomyx to prepare [***].
 
Participates in [***].
  Defines and agrees to [***].
 
If desired, coordinate [***].
  Prepares [***].
  
Performs [***] according to agreed protocol.
  
Performs [***].
  [***]
    Steering Committee meeting is held.   Senomyx to share [***].   [***]
Nestlé to review [***]. Nestlé has up to [***] to determine if a [***].       Identifies [***].
  
Prepares first [***]. Submit [***] to Nestlé.
  [***]
        Initiates [***].    
Nominates [***].   Steering Committee meeting is held.
  
Agrees to the selection of a [***].
  
Agrees to the [***].
  
Steering Committee approves [***].
  [***] data package [***].
 
Senomyx initiates [***].
 
Expected [***].
  [***]
 
[***]
    Establishes desired [***].   Continue to [***] and evaluate in the [***]   [***]
             

28


    Steering Committee meeting is held.
 
Steering Committee approves [***].
  Senomyx to [***] to coordinate and/or perform [***].
  
Senomyx to [***] to initiate [***].
  
Senomyx will initiate [***].
Expected [***].
  [***]
        Senomyx is responsible for [***].   [***]
    Investigate [***] and initiate [***].       [***]
    Steering Committee meeting is held.       [***]
    Steering Committee meeting is held.       [***]
Nestlé would present [***]           [***]
    Steering Committee meeting is held. Reviews [***].
 
Steering Committee approves [***].
  [***] is completed.
 
Expected [***].
  [***]
        Submits [***].   [***]
    Steering Committee meeting is held.   Receives [***].   [***]
Nestlé will [***] to implement and complete a [***] to ascertain the [***].           No later than [***] following [***]

29


         ***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.

FIRST AMENDMENT
TO THE
COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

         THIS FIRST AMENDMENT TO THE COLLABORATIVE RESEARCH AND LICENSE AGREEMENT (the "First Amendment" ) is made by and between SENOMYX, INC. ( "Senomyx" ), a Delaware corporation, having a principal place of business at 11099 North Torrey Pines Road, La Jolla, California 92037, and NESTEC, Ltd. ( "Nestlé" ), a Swiss company, having a principal place of business at Avenue Nestlé 55, CH-1800 Vevey, Switzerland.

         WHEREAS, Senomyx and Nestlé entered into that certain Collaborative Research and License Agreement dated as of April 18, 2002 (the "Agreement" ) to collaborate in the following research and development programs: (i) to discover compounds that enhance the [***] taste of products in defined fields; and (ii) to discover compounds that enhance the taste of [***] in defined fields (capitalized terms used but not otherwise defined in this First Amendment shall have the meanings given such terms in the Agreement); and

         WHEREAS, the parties wish to amend the Agreement to expand the [***] Program to include discovery of compounds that mimic the taste of [***] and [***] in the manner set forth in this First Amendment.

         NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree to amend the Agreement as follows:

        1.     The first two sentences of Section 4 of the Agreement are hereby amended and restated in their entirety as follows:

        2.     Section 7.2.2(2) of the Agreement is hereby amended and restated in its entirety as follows:

1


        3.     The following definitions of Appendix A of the Agreement are hereby amended and restated herein. All other definitions in the Agreement will remain unchanged.

        4.     The Research Plan Appendix B for the [***] Program is hereby amended and restated in its entirety as attached hereto. The Research Plan Appendix B for the [***] Program shall remain unchanged.

        5.     Except as specifically amended by this First Amendment, the terms and conditions of the Agreement shall remain in full force and effect.

        6.     This First Amendment will be governed by the laws of California, U.S.A., as such laws are applied to contracts entered into and to be performed entirely within such state.

        7.     This First Amendment may be executed in two or more counterparts, each of which shall be deemed an original, but all of which together shall constitute one and the same instrument.

         IN WITNESS WHEREOF, the parties have executed this First Amendment effective as of October 23, 2003.

NESTEC LTD.    

By:

 

/s/  
[TEXT ILLEGIBLE]       

 

 

Title:

 

Director


 

 

Date:

 

October 23, 2003


 

 

SENOMYX, INC.

 

 

By:

 

/s/  
KENT SNYDER       

 

 

Title:

 

President and CEO


 

 

Date:

 

October 23, 2003


 

 

2


APPENDIX B

TO FIRST AMENDMENT TO THE
COLLABORATIVE RESEARCH AND LICENSE AGREEMENT

AMENDED AND RESTATED RESEARCH PLAN FOR [***] PROGRAM

REFER TO APPENDIX B OF [***] PROGRAM OF ORIGINAL AGREEMENT NO CHANGES MADE WITH FIRST AMENDMENT

3




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Exhibit 10.16

***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.

        Confidential

COLLABORATIVE RESEARCH,
DEVELOPMENT, COMMERCIALIZATION
AND LICENSE AGREEMENT

BETWEEN

SENOMYX, INC.
AND
THE COCA-COLA COMPANY



Table of Contents

COLLABORATIVE RESEARCH, DEVELOPMENT, COMMERCIALIZATION AND LICENSE AGREEMENT   1
1.   DEFINITIONS   1
2.   OBJECT OF AGREEMENT   1
3.   COLLABORATIVE R&D PROGRAM   1
4.   STEERING COMMITTEE   1
    4.1 Formation of Steering Committee   1
    4.2 Role of Steering Committee   1
    4.3 Composition   2
    4.4 Operation   2
    4.5 Meetings   2
    4.6 Minutes   2
5.   RESEARCH PLAN   2
    5.1 Initial Research Plan   2
    5.2 Implementation of Research Plan   2
    5.3 Determination of Commercially Viable Enhancing Compound(s)   3
    5.4 Notification of Selected Compound   3
    5.5 KO Compounds and KO Related Compounds   3
    5.6 [***] Enhancing Compounds   3
6.   DEVELOPMENT   3
    6.1 Initial Development Plan   3
    6.2 Implementation of Development Plan   4
    6.3 Regulatory   4
    6.4 Costs of Regulatory Filings   4
    6.5 Additional Safety Studies or Regulatory Approvals   4
    6.6 Cooperation   4
7.   COMMERCIALIZATION   5
    7.1 Commercialization Plan   5
    7.2 Format of Commercialization Plan   5
8.   RIGHTS, OBLIGATIONS AND LIMITATION OF THE PARTIES   5
    8.1 Inside the Fields   5
    8.2 Outside the Fields   5
    8.3 Preferred Relationship   6
    8.4 Manufacturing   6
    8.5 Rights to a New High-Potency [***]   6
9.   FINANCIAL TERMS   7
    9.1 Annual Research Support   7
    9.2 Credit Toward Royalties During Collaborative R&D Period   7
    9.3 Milestone Payments   7
    9.4 Royalty for Beverages Incorporating Product Compounds   8
    9.5 Minimum Annual Royalties   9
    9.6 Adjustment of Values for Minimum Royalties   10
    9.7 Payment Terms   10
    9.8 Currency of Payment   11
    9.9 Taxes Withheld   11
    9.10 Late Payment   11
    9.11 Records of Unit Sales, Net Sales and Royalty Calculations   11
10.   GRANTS   12
         

ii


    10.1 Non-exclusive Grant by SENOMYX of Rights Regarding Evaluation of Enhancing Compounds   12
    10.2 Non-exclusive Grant by SENOMYX of Rights to Make and Have Made Selected Compounds   12
    10.3 Non-Exclusive Grant of Rights by SENOMYX to Make, Have Made, Use and Sell Beverages and Beverage Bases with Selected Compound   12
    10.4 Exclusive Grant of Rights by SENOMYX Regarding Selected Compounds and Beverages and Beverage Bases that Incorporate Selected Compounds   12
    10.5 Co-Exclusive Grant of Rights by SENOMYX Regarding Selected Compounds and Powdered Beverage Bases incorporating Selected Compounds   13
    10.6 Contingent Third Party Rights to Field II   13
    10.7 Limitation on Licenses   13
    10.8 If KO Does Not Pay Minimum Royalties   13
    10.9 Most Favored Licensee   13
    10.10 Obligations Related to Sublicenses   13
    10.11 Non-exclusive Grant of Rights from KO to SENOMYX for Research Purposes   14
    10.12 Non-exclusive Grant of Rights from KO to SENOMYX for KO Related Compounds   14
    10.13 Exclusive Grant of Rights from KO to SENOMYX for KO Related Compounds   14
    10.14 Non-Exclusive Grant of Rights to SENOMYX Trademark   14
11.   OWNERSHIP OF INTELLECTUAL PROPERTY   14
    11.1 Transfer of Rights   14
    11.2 SENOMYX Inventions   14
    11.3 KO Inventions   15
    11.4 Joint Inventions   15
    11.5 Other Inventions   15
    11.6 Markings   15
    11.7 Inventorship and Assignment   16
12.   PATENT PROSECUTION AND MAINTENANCE   16
    12.1 Prosecution of Patents   16
    12.2 Inventions under Collaboration   16
13.   INTELLECTUAL PROPERTY ENFORCEMENT AND DEFENSE OF CLAIMS   16
    13.1 Defense of Infringement Claims for SENOMYX Technology   16
    13.2 Defense of Infringement Claims for KO Technology   17
14.   TREATMENT OF CONFIDENTIAL INFORMATION: REPORTING REQUIREMENTS, PUBLICITY, LAW AND REGULATIONS   17
    14.1 Confidentiality   17
    14.2 Disclosure to Related Parties   17
    14.3 Return of Confidential Material   18
    14.4 Exceptions to Confidential Information   18
    14.5 Confidential Financial Information   18
    14.6 Confidential Research Information   18
    14.7 Permitted Use and Disclosures   19
    14.8 Use of Data for Promotional Purposes   19
    14.9 Publication of Results   19
    14.10 Publicity   19
    14.11 Reporting, Law and Regulation   20
15.   TERM, EARLY CONCLUSION, AND TERMINATION   20
    15.1 Term   20
    15.2 Early Conclusion of the Collaborative R&D Period by KO   20
    15.3 Termination By Mutual Agreement   20
    15.4 Termination By KO for Acquisition of SENOMYX By a KO Competitor   20
         

iii


    15.5 Effect of Termination   20
    15.6 Survival   21
16.   WARRANTIES AND INDEMNIFICATION   21
    16.1 Mutual Representations and Warranties   21
    16.2 Corporate Power   21
    16.3 Due Authorization   21
    16.4 Binding Agreement   21
    16.5 Warranties Regarding SENOMYX Technology   22
    16.6 Warranties Relating to KO Technology   23
17.   MISCELLANEOUS   24
    17.1 Force Majeure   24
    17.2 Governing Law and Jurisdiction   24
    17.3 Binding Effect   24
    17.4 Dispute Resolution   25
    17.5 Severability   26
    17.6 Independent Contractors   26
    17.7 Entire Agreement   26
    17.8 Amendment   26
    17.9 Interpretation   27
    17.10 Waiver   27
    17.11 Construction   27
    17.12 No Third Party Beneficiaries   27
    17.13 Notices   27
    17.14 Assignment   27
    17.15 Merger or Consolidation   27
    17.16 Counterparts   28
APPENDIX A—DEFINITIONS   29
APPENDIX B—RESEARCH PLAN   33
APPENDIX C—DEVELOPMENT PLAN   38
APPENDIX D—COMMERCIALIZATION PLAN   40
APPENDIX E—EXCEPTIONS TO KO RIGHTS TO KO COMPOUND (TO BE PROVIDED BY KO)   41

iv


COLLABORATIVE RESEARCH, DEVELOPMENT, COMMERCIALIZATION AND LICENSE AGREEMENT

        This Agreement is entered into as of the April 22, 2002 (the " Effective Date ") by and between SENOMYX, INC., a Delaware Corporation having its principal place of business at 11099 North Torrey Pines Road, La Jolla, CA 92037 (" SENOMYX ") and THE COCA-COLA COMPANY, a Delaware Corporation, having its principal place of business at One Coca-Cola Plaza, Atlanta, Georgia 30313 (" KO ").

BACKGROUND

         WHEREAS , SENOMYX conducts research in the field of chemosensation, an objective of which is to study potential biological targets and develop assays for use in the discovery of compounds that will ultimately be commercialized as taste and olfaction products. KO is in the business of developing, manufacturing and marketing consumer products. SENOMYX and KO desire to collaborate in research and development to discover and commercialize compounds that enhance the [***] taste of commercial [***] for use in the fields defined below.

         NOW, THEREFORE, in consideration of the foregoing premises and of the covenants, representations and agreements set forth below, the parties hereby agree as follows:

THE AGREEMENT

1.     DEFINITIONS

        Certain capitalized terms are defined in Appendix A and incorporated into this Agreement by reference.

2.     OBJECT OF AGREEMENT

        The goals of the collaboration between KO and SENOMYX are:

3.     COLLABORATIVE R&D PROGRAM

        The parties will collaborate during the Collaborative R&D Period to discover Enhancing Compounds and develop Selected Compounds, pursuant to the Research Plan and the Development Plan (collectively, the " Collaborative R&D Program "). This Agreement establishes a Collaborative R&D Program of three years (" Collaborative R&D Period ").

4.     STEERING COMMITTEE

        4.1    Formation of Steering Committee     

        No later than ten days after the Effective Date, the parties will establish a joint steering committee (" Steering Committee ").

        4.2    Role of Steering Committee     

        The Steering Committee will manage the Collaborative R&D Program and will:

1


        4.3    Composition     

        The Steering Committee will consist of two representatives officially designated by SENOMYX and two representatives officially designated by KO, all of whom may change from time to time.

        4.4    Operation     

        Each official member of the Steering Committee will have one vote. All Steering Committee decisions will be made by unanimous vote and at a meeting where all four official members participate. Any unresolved disputes will be subject to the procedures outlined in Section 17.4, or as otherwise mutually agreed upon by the parties in writing.

        4.5    Meetings     

        The Steering Committee will first meet no later than thirty days after the Effective Date and at least four times per year during the Collaborative R&D Period and the Commercialization Period of this Agreement using mutually agreed upon meeting locations and formats including teleconferencing and videoconferencing. Each party will bear its own expenses relating to the meetings and activities of the Steering Committee. Subject to the approval of the Steering Committee, which shall not be unreasonably withheld, each party may request the attendance of subject matter experts, who may or may not be employees of either party, as desired at Steering Committee meetings as non-voting, unofficial, ad-hoc members.

        4.6    Minutes     

        During the Collaborative Period and the Commercialization Period, SENOMYX will promptly prepare and deliver to the members of the Steering Committee, the minutes of such meetings for review and approval by both parties.

5.     RESEARCH PLAN.

        5.1    Initial Research Plan     

        The initial research plan is set forth in Appendix B and incorporated into this Agreement by reference (" Research Plan ").

        5.2    Implementation of Research Plan     

        SENOMYX will use best efforts, using the resources received under Section 9.1, to perform the activities outlined in the Research Plan. SENOMYX represents and KO acknowledges that the total resources to be deployed for pursuit of the program objectives will be significantly more than those provided under Section 9.1. SENOMYX will designate a project team comprising personnel with the technical qualifications and expertise that are reasonably required to accomplish the activities outlined in the Research Plan. If there are any changes in the members of the project team, SENOMYX will ensure that replacement members will have the equivalent technical qualifications and expertise.

2



        SENOMYX will provide KO reasonable access to the aggregate results of the screening program including the identity of the compounds screened and information about active compounds (compounds exhibiting activity in the assay) found. SENOMYX will provide KO with information on all Enhancing Compounds, including information on stability,solubility, in vitro toxicity and in vivo toxicity, samples of Enhancing Compounds adequate for full evaluation (the amount of which shall be determined by the Steering Committee), and manufacturing cost estimates (" Data Package(s) ").

        KO will use best efforts to perform the activities in accordance with the Research Plan, including the evaluation of the Data Packages provided by SENOMYX for Enhancing Compounds.

        5.3    Determination of Commercially Viable Enhancing Compound(s)     

        Each time SENOMYX provides a Data Package, KO will determine whether an Enhancing Compound in such Data Package is commercially viable for use in Beverages and Beverage Bases in the Fields. Such determination will be made with the assistance of SENOMYX under the criteria identified in Section 9.3(b), and such other criteria due to the specifics of the Enhancing Compound or Development Plan. Such determination will be made within a mutually agreeable period from receiving such Data Package, not to exceed [***] .

        5.4    Notification of Selected Compound     

        At the Steering Committee meeting directly following the evaluation of such Data Package, KO will notify the Steering Committee of the results of the evaluation and the Steering Committee will determine if an Enhancing Compounds in such Data Package will be selected for development under the Development Plan (" Selected Compound(s) ").

        5.5    KO Compounds and KO Related Compounds     

        KO represents that it has found a compound having a [***] effect for among others [***] ("KO Compound"). KO has also identified a list of [***] that KO would be interested in investigating for [***] effects ("KO Related Compounds"). Prior to KO disclosing the KO Compound and the KO Related Compounds to SENOMYX, though it is anticipated that such disclosure will be no later than [***] following the Effective Date, KO will provide SENOMYX with a complete report detailing its patent searches, including any freedom to operate opinions, covering the KO Compounds and KO Related Compounds. The Steering Committee will decide which if any of the KO Related Compounds will be synthesized by SENOMYX and investigated using SENOMYX Technology to determine whether any of the KO Related Compounds exhibit enhancing effects with the Target [***] .

        5.6    [***] Enhancing Compounds     

        The Collaborative R&D Program contemplates the investigation of [***] compounds for commercial [***] potential. SENOMYX and KO acknowledge that the Collaborative R&D Program would initially concentrate on the discovery of [***] compounds. The initiation of and the terms for the discovery of [***] compounds will be mutually agreed upon in writing by the Steering Committee. The parties will negotiate in good faith, any amendment to the Agreement relating to incremental costs for enabling technologies mutually deemed necessary for the discovery and commercialization of [***] compounds.

6.     DEVELOPMENT.

        6.1    Initial Development Plan     

        The initial development plan is set forth in Appendix C and incorporated into this Agreement by reference (" Development Plan ").

        SENOMYX will use best efforts using the resources received under Section 9.1 to perform the activities assigned to it in the Development Plan. SENOMYX represents and KO acknowledges that

3



the total resources to be deployed for pursuit of the program objectives will be significantly more than those provided under Section 9.1.

        KO will use best efforts to perform the activities assigned to it in the Development Plan.

        6.2    Implementation of Development Plan     

        The implementation of the Development Plan will:

        6.3    Regulatory     

        6.4    Costs of Regulatory Filings     

        SENOMYX will be responsible for the reasonable costs associated with FEMA GRAS determination. SENOMYX will not be responsible for costs that exceed the greater of either:

        Any costs incurred by KO in obtaining FEMA GRAS determination for a Selected Compound that becomes a Product Compound, will be [***] .

        6.5    Additional Safety Studies or Regulatory Approvals     

        The Steering Committee will agree on:

        6.6    Cooperation     

        KO will cooperate to the extent reasonably necessary to assist SENOMYX in the performance of the foregoing activities and SENOMYX will provide KO with copies of all filings, data and determinations on the Selected Compound(s).

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        In addition, each party is obligated to:

7.     COMMERCIALIZATION

        7.1    Commercialization Plan     

        As an overall goal of the Commercialization Plan, KO desires to market current and new Beverages and Beverage Bases incorporating Product Compounds. Prior to completion of the activities set forth in the Development Plan for the Selected Compound(s), KO will prepare a detailed plan for the commercialization of Beverages and Beverage Bases incorporating Product Compounds that includes, as a minimum, the guidelines stated below in Section 7.2 (the " Commercialization Plan "). The Commercialization Plan will be attached as Appendix D to this Agreement, and incorporated into the Agreement by reference.

        7.2    Format of Commercialization Plan     

        The Commercialization Plan will include:

        Thereafter KO will provide general sales forecasting reports for Beverages and Beverage Bases incorporating a Product Compound on an annual basis for the remainder of the Commercialization Period. Such sales forecasting reports shall include quantifiable information, including projected Unit Case sales and market research data, if available, with an annual forecast of Product Compound requirements for the next Calendar Year, submitted to SENOMYX at least [***] before the beginning of the next Calendar Year. The Steering Committee will meet as appropriate to review and assess, for purposes of establishing future manufacturing needs, the sales forecast report. In accordance with the Commercialization Plan, KO will be responsible for formulating and testing Beverages and Beverage Bases incorporating Product Compounds including the cost associated with such activities.

8.     RIGHTS, OBLIGATIONS AND LIMITATION OF THE PARTIES

        8.1    Inside the Fields     

        During the Term of the Agreement SENOMYX agrees not to provide research and development services or grant any rights to SENOMYX Technology to a Third Party for use in the discovery or commercialization of Compounds for application in the Fields, subject to the co-exclusive rights in Field II, the early conclusion provision under Section 15.2, and KO's royalty payment obligations under Section 10.8.2.

        8.2    Outside the Fields     

        SENOMYX will have the right to enter into collaborative programs with Third Parties, including but not limited to collaborative programs to discover Compounds for use outside the Fields. Furthermore, nothing in this Agreement will limit the right of

5



        SENOMYX to license or commercialize Compounds as [***] enhancers of [***] , which are:

        Subject to the rights of the Third Party set forth in Section 10.5, SENOMYX will not promote or allow, where possible, any Third Party to promote such [***] enhancers to be used with a Competitive Product in the Fields.

        8.3    Preferred Relationship     

        SENOMYX and KO acknowledge that SENOMYX may collaborate with Third Parties in programs unrelated to Compounds. Such collaboration may result in the discovery of technologies and compounds that have application in the Fields. Unless otherwise precluded under this Agreement or Third Party agreements, SENOMYX will provide KO with non-confidential information regarding such new technologies and use reasonable effort to negotiate mutually acceptable commercial terms for KO to obtain a license to such new technologies for use in the Fields.

        8.4    Manufacturing     

        The parties will collaborate to identify a manufacturer and/or enter into supply and manufacturing agreements with a mutually agreed upon Third Party(ies) regarding Product Compounds; provided however, SENOMYX will have the option to be the preferred manufacturer of any such Product Compounds, subject to KO's approval which shall not be unreasonably withheld. Nothing in this Section 8.4 shall prevent KO from identifying and/or entering into supply and manufacturing agreements with secondary manufacturers of any Product Compound.

        8.5    Rights to a New High-Potency [***]     

        This Agreement does not preclude SENOMYX from entering into a collaboration for the discovery, development and commercialization of compounds that are high-potency [***] , as long as such compounds do not enhance the intensity of other [***] including the Target [***] at concentrations below the threshold of [***] for such compounds (" High-Potency [***] "). During the first [***] following the Effective Date and before entering into a collaboration with a Third Party for the discovery, development, and commercialization of High-Potency [***] , suitable for use in the Fields, SENOMYX will provide written notice of non-confidential terms to KO. Within [***] of such notice, KO may exercise a right of first refusal by entering into a binding definitive agreement on terms [***] . If KO decides not to enter into a collaboration under such Third Party's terms, SENOMYX may, with no further notification or obligation, enter into collaboration with any Third Party; provided, however, that the terms of such Third Party collaboration will be [***] .

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9.     FINANCIAL TERMS

        9.1    Annual Research Support     

        9.2    Credit Toward Royalties During Collaborative R&D Period     

        If during any year of the Collaborative R&D Period KO is paying royalties, then all royalties up to [***] will be waived. Any royalties not waived (i.e.. in excess of [***] ) under the preceding sentence will be credited against any future amounts owed for Annual Research Support under Section 9.1 in such year during the Collaborative R&D Period.

        9.3    Milestone Payments     

        KO will pay SENOMYX the following non-creditable, non-refundable milestone payments within [***] of the occurrence of the following milestone events, as determined by the Steering Committee:

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        9.4    Royalty for Beverages Incorporating Product Compounds     

        KO will pay to SENOMYX a royalty on Beverages incorporating a Product Compound [***] :

 
   
  Royalty Rate (R)
[***]

  [***]
  For [***]
annual [***] of
Beverages
incorporating
Product
Compounds
[***]

  For the volume
greater than
[***] of
Beverages
incorporating
Product
Compounds
and less than
[***]

  For the volume
greater than
[***] of
Beverages
incorporating
Product
Compounds
[***]

[***]   [***]   [***]   [***]   [***]
[***]   [***]   [***]   [***]   [***]
[***]   [***]   [***]   [***]   [***]
[***]   [***]   [***]   [***]   [***]

        To determine the [***] , the parties will use the following equation:

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        As the number of [***] incorporating a Product Compound increases above [***] but is below [***] , the royalty rate would change as indicated in the above table; provided, however, that the new royalty rate would only be used to calculate the [***] for the [***] incorporating a Product Compound above [***] and below [***] . Likewise as the number of [***] incorporating a Product Compound increases above [***] , the royalty rate will change as indicated in the above table [***] ; provided, however, that this new royalty rate [***] will only be used to calculate the [***] for the [***] . The total [***] would be the [***] of the [***] calculated using each royalty rate.

        For the achievement of an [***] (i.e., one which is not shown on the above table), the parties will use the actual [***] , multiplied by a royalty rate [***] from the next [***] and the next [***] on the table above. If the [***] is [***] , the parties will use the actual [***] the applicable [***] royalty rate.

        For Beverages incorporating Product Compounds sold by KO, its Affiliates and Bottlers where in the Product Compound is a KO Related Compound, the royalties calculated in this Section 9.4 will be [***] .

        9.5    Minimum Annual Royalties     

        The amount due for any such 12 month period is the [***] is payable [***] after the end of any 12-month period. The amounts paid for [***] .

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        The amount due for any such [***] period is the [***] is payable [***] after the end of any 12-month period. The amounts paid for [***] any amounts due SENOMYX for royalties over the [***] royalties in the subsequent [***] .

        9.6    Adjustment of Values for Minimum Royalties     

        The minimum annual royalty values in Section 9.5.1 e) and 9.5.2 e) will be [***] for the [***] of the Commercialization Period and beyond, for: (i)  [***] using the [***] , using the first year of Commercialization Period as the base year; and, (ii)  [***] using the [***] year of the Commercialization Period as the base year.

        9.7    Payment Terms     

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        9.8    Currency of Payment     

        All payments to be made under this Agreement, including the royalties payable to SENOMYX by KO, will be paid in United States dollars by wire transfer (or other means acceptable to SENOMYX) to a bank account designated by SENOMYX.

        With respect to each quarter, for countries other than the United States, whenever conversion of Cost, SP, Net Sales, or payments from any foreign currency are required, such conversion will be made at the rate of exchange reported in The Wall Street Journal on the last business day of the applicable reporting period.

        9.9    Taxes Withheld     

        Any income or other tax that KO, or any of its Affiliates or sublicensees are required by a government agency to withhold and pay on behalf of SENOMYX with respect to the royalties payable under this Agreement will be deducted from and offset against such royalties prior to remittance to SENOMYX. KO will give or cause to be given to SENOMYX such assistance as may reasonably be necessary to enable SENOMYX to claim exemption from, or credit for, the tax so deducted, and, in each case, will promptly furnish to SENOMYX proper evidence of the taxes paid on SENOMYX's behalf.

        9.10    Late Payment     

        In the event that any payment, including royalty payments, due hereunder is not made when due, the payment will accrue interest from that date due at the rate of [***] percent per month; provided, however, that in no event will such rate exceed the maximum legal annual interest rate. The payment of such interest will not limit SENOMYX from exercising any other rights it may have as a consequence of the lateness of any payment.

        9.11    Records of Unit Sales, Net Sales and Royalty Calculations     

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10.   GRANTS

        Subject to the terms and conditions of this Agreement, SENOMYX hereby grants to KO and KO hereby grants to SENOMYX the following rights, as of the later of 30 days after execution of this Agreement or of the expiration of the waiting period under the Hart Scott Rodino Act, if any notification and report under the Act is required:

        10.1    Non-exclusive Grant by SENOMYX of Rights Regarding Evaluation of Enhancing Compounds     

        10.2    Non-exclusive Grant by SENOMYX of Rights to Make and Have Made Selected Compounds     

        SENOMYX hereby grants KO a perpetual, nontransferable, non-exclusive, worldwide license under the Target IP to make and have made Selected Compounds for use by KO and its Affiliates in Beverages and Beverage Bases in the Fields.

        All rights granted by SENOMYX to KO under this Section will be subject to timely payment by KO of all payments under this Agreement.

        10.3    Non-Exclusive Grant of Rights by SENOMYX to Make, Have Made, Use and Sell Beverages and Beverage Bases with Selected Compound     

        SENOMYX hereby grants to KO a perpetual, nontransferable, non-exclusive worldwide license under Target IP to make, have made, use and sell, Beverages and Beverage Bases that incorporate Selected Compounds in Field I.

        All rights granted by SENOMYX to KO under this Section will be subject to timely payment by KO of all payments under this Agreement.

        10.4    Exclusive Grant of Rights by SENOMYX Regarding Selected Compounds and Beverages and Beverage Bases that Incorporate Selected Compounds     

        SENOMYX hereby grants to KO a perpetual, nontransferable exclusive worldwide license under Target IP to make, have made, use and sell Beverages and Beverage Bases that incorporate Selected Compounds in Field I.

        The license will include the right to sublicense the use and sale of Product Compounds to be embodied in a Competitive Product in Field I. The license will include the right to sublicense the use and sale of one Selected Compound (that is not a Product Compound) to be embodied in a Competitive Product in Field I, with the prior written consent of SENOMYX which will not be unreasonably withheld.

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        All rights granted by SENOMYX to KO under this Section will be subject to timely payment by KO of all payments under this Agreement.

        10.5    Co-Exclusive Grant of Rights by SENOMYX Regarding Selected Compounds and [***] Beverage Bases incorporating Selected Compounds     

        SENOMYX hereby grants to KO a perpetual, nontransferable co-exclusive, (only one other licensee) with respect to one other Third Party, worldwide license under Target IP to make, have made, use and sell [***] Beverage Bases incorporating Selected Compounds in Field II.

        All rights granted by SENOMYX to KO under this Section will be subject to timely payment by KO of all payments under this Agreement.

        10.6    Contingent Third Party Rights to Field II     

        SENOMYX has existing collaborations with a Third Party for the discovery of molecules that modify taste, other than Enhancer Compounds, for products in Field II. SENOMYX agrees to use best efforts for a period of [***] following the Effective Date to amend such collaboration agreement to include the discovery of [*** ] for use in Field II. The rights granted to KO in Field II are contingent on the rights granted to such Third Party under the amended collaboration.

        10.7    Limitation on Licenses     

        None of the rights granted hereunder are intended to give KO the right to sell Enhancing Compounds, Selected Compounds or Product Compounds. The foregoing does not prevent KO from supplying Product Compounds to a sublicensee pursuant to a sublicense.

        10.8    If KO Does Not Pay Minimum Royalties     

        If at the end of any Calendar Year the royalties paid by KO to SENOMYX for such Calendar Year, as provided for under Section 9.4, are less than the minimum royalties due under Section 9.5 for such Calendar Year, and KO does not pay SENOMYX the corresponding Royalty Shortfall for such year, then:

        The non-exclusive license will be subject to the royalties provided for under Section 9.4, but not subject to the minimum annual royalties obligation under Section 9.5.

        10.9    Most Favored Licensee     

        In the event that [***] , SENOMYX will [***] .

        10.10    Obligations Related to Sublicenses     

        KO will have the right to grant sublicenses under this Section 10.10 to Third Parties, Affiliates, and Bottlers. In respect of sublicenses to Third Parties; such rights granted will be contingent on:

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        Sublicenses granted by KO would be subject to SENOMYX receiving at least the same obligations, including royalties, as SENOMYX would receive under this Agreement (" Obligated Royalties "). Payments received by KO from any party under such sublicense, other than an Affiliate or Bottlers, [***] the amount of [***] . Any payments paid to KO by its sublicensees, other than under sublicenses to Affiliates and Bottlers for Beverages and Beverage Bases, [***] the amount of [***] would be [***] . KO would be liable for the royalty payments to SENOMYX due by any sublicensee.

        All rights granted by KO to sublicensees under this Section will be subject to KO's diligence obligations under this Agreement, the timely payment by KO of all payments under this Section and compliance with other obligations in the sublicense agreement.

        10.11    Non-exclusive Grant of Rights from KO to SENOMYX for Research Purposes     

        KO hereby grants to SENOMYX a royalty free, non-exclusive, worldwide license to use the KO Technology for research purposes under this Agreement, with the right to grant sublicenses for research purposes; provided, however, that any such sublicense shall be subject to the prior written approval of KO, which shall not be unreasonably withheld.

        10.12    Non-exclusive Grant of Rights from KO to SENOMYX for KO Related Compounds     

        KO hereby grants to SENOMYX a fully paid, perpetual, exclusive, worldwide license, to make and have made KO Related Compounds, with the right to sublicense outside the Fields.

        10.13    Exclusive Grant of Rights from KO to SENOMYX for KO Related Compounds     

        KO hereby grants to SENOMYX a fully paid, exclusive, worldwide, fully-transferable license, to use, sell, offer for sale, have sold, import and export KO Related Compounds outside the Fields.

        10.14    Non-Exclusive Grant of Rights to SENOMYX Trademark     

        Subject to the terms and conditions of the Agreement, SENOMYX hereby grants to KO a non-exclusive, nontransferable worldwide license to use the trademark of SENOMYX (" Trademark ") during the Term solely in connection with the marketing and sale of the

        Beverages incorporating Product Compounds; provided, however, that: (i) KO must comply with all applicable laws and regulations with respect to the Trademark and must not do or suffer to be done any act or thing that would impair SENOMYX's rights; and (ii) KO agrees not to adopt or use any other trademark, words or symbol that features or includes the word SENOMYX or any marks which are confusingly similar to the Trademark.

11.   OWNERSHIP OF INTELLECTUAL PROPERTY

        11.1    Transfer of Rights     

        SENOMYX retains all rights not expressly licensed or assigned in this Agreement. Except as otherwise expressly provided in this Agreement, nothing in this Agreement is intended to convey or transfer ownership or the grant of any license or sublicense by one party to the other party of any rights in any Confidential Information, Patent Rights or Know-How Controlled by a party.

        11.2    SENOMYX Inventions     

        SENOMYX will own all Inventions and other Know-How made solely by its employees and agents and all Patent Rights claiming such Inventions and Know-How; provided, however, SENOMYX hereby irrevocably assigns to KO all interest in and to any such Inventions and Know-How that consist solely of improvements to KO technology, including but not limited to the KO Compound and KO Related Compounds, and all Patent Rights claiming such Inventions and other Know-How. SENOMYX agrees to give KO prompt notice of the making, conceiving or reducing to practice of any such Invention. In the event that SENOMYX is legally unable to assign such rights to KO, then SENOMYX agrees either

14



to waive the enforcement of such rights against KO and any sublicensees and assignees, or to grant KO an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        11.3    KO Inventions     

        KO will own all Inventions and other Know-How made solely by its employees and agents, including those related to product formulations, [***] and [***] , and all Patent Rights claiming such Inventions and Know-How, and SENOMYX will have no rights to such Inventions, Know-How and product formulations.

        KO hereby irrevocably assigns to SENOMYX all interest in and to any such Inventions and other Know-How that consist solely of improvements to SENOMYX Technology, Enhancing Compounds, or Selected Compounds, and all Patent Rights claiming such Inventions and Know-How. KO agrees to give SENOMYX prompt notice of the making, conceiving or reducing to practice of any such Invention. In the event that KO is legally unable to assign such rights to SENOMYX, then KO agrees either to waive the enforcement of such rights against SENOMYX and any sublicensees and assignees, or to grant SENOMYX an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        11.4    Joint Inventions     

        All Inventions conceived jointly by employees or agents of SENOMYX and employees or agents of KO (the " Joint Inventions ") and all Joint Patent Rights will be owned jointly by KO and SENOMYX.

        KO hereby irrevocably assigns to SENOMYX all interest in and to any Joint Inventions that consist of improvement to SENOMYX Technology, Enhancing Compounds, or Selected Compounds and uses thereof, and all Joint Patent Rights claiming such Joint Inventions. In the event that KO is legally unable to assign such rights to SENOMYX, then KO agrees either to waive the enforcement of such rights against SENOMYX and any sublicensees and assignees, or to grant SENOMYX an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        SENOMYX hereby irrevocably assigns to KO all interest in and to any Joint Inventions that consist of improvement to KO Technology, including any improvements to KO Technology relating to beverage product formulations and uses thereof, and all Joint Patent Rights claiming such Joint Inventions. In the event that SENOMYX is legally unable to assign such rights to KO, then SENOMYX agrees either to waive the enforcement of such rights against KO and any sublicensees and assignees, or to grant KO an exclusive, irrevocable, perpetual, worldwide, fully-paid license, with right to sublicense through multiple tiers of sublicense, to such rights.

        11.5    Other Inventions     

        Any Inventions not included in Sections 11.2, 11.3, or 11.4 will be owned by their inventors.

        11.6    Markings     

        KO agrees to mark and to cause any Affiliate or sublicensee to mark any Beverage or Beverage Base (or their containers or labels) made, sold or otherwise disposed of by it or them with any notice of Patent Rights if mutually desirable by the parties or necessary under applicable law to enable the SENOMYX Patent Rights or Joint Patent Rights, as applicable, to be enforced to their full extent in any country where Beverages and Beverage Bases incorporating Product Compounds are made, used, or sold. In addition, KO agrees to mark and to cause any Affiliate or sublicensee to mark any Beverages and Beverage Bases incorporating Product Compounds (or their containers or labels) made, sold or otherwise disposed of by it or them with a SENOMYX trademark if desirable by KO.

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        11.7    Inventorship and Assignment     

        United States patent law will determine inventorship of patentable inventions. SENOMYX and KO agree to execute all documentation necessary to perfect all assignments of Inventions, Know-How and Patent Rights contemplated in this Agreement.

12.   PATENT PROSECUTION AND MAINTENANCE

        12.1    Prosecution of Patents     

        Each party will bear the cost of filing and prosecuting the patents and patent applications associated with inventions owned or assigned to that party. SENOMYX will bear the cost of filing and prosecuting the patents and patent applications in the U.S. and PCT for the first Selected Compound. KO will reimburse SENOMYX for the reasonable out-of-pocket costs for the prosecution of all national phase applications of all countries selected in the PCT application, and all maintenance fees and annuities for any patents issuing from those applications. The Steering Committee will make recommendations on additional patent applications to be filed. In addition, KO would agree to pay the cost of all patents and patent applications for additional Selected Compounds up to [***] per year for each such additional Selected Compound. KO would no longer have to pay for patent applications, maintenance fees and annuities if the license granted under Section 10.4 were terminated. SENOMYX will keep KO fully apprised of all proceedings related to the patent applications and patents for Selected Compounds. If KO determines that continuing prosecution of an application, or the continuation of payment of maintenance fees and annuities is not warranted, KO will notify SENOMYX in writing within [***] of the date it wishes to discontinue prosecution of a patent, and the obligation to pay for such costs incurred after notification would end.

        12.2    Inventions under Collaboration     

        The control and expense of the filing, prosecution and maintenance of any Patent Rights or other intellectual property rights claiming Inventions that are not covered under section 11.1 will be as follows:

13.   INTELLECTUAL PROPERTY ENFORCEMENT AND DEFENSE OF CLAIMS

        13.1    Defense of Infringement Claims for SENOMYX Technology     

        KO will cooperate with SENOMYX, at SENOMYX's expense, in the defense of any suit, action or proceeding against SENOMYX or SENOMYX's Affiliates alleging the infringement of the intellectual property rights of a Third Party due to SENOMYX's use of any SENOMYX Technology under this Agreement.

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        The parties must notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement.

        SENOMYX will have full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms, any such suit, action or proceeding and KO will in good faith execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

        With respect to Target IP, if SENOMYX does not commence a particular infringement action within [***] of receiving notice, KO, after notifying SENOMYX in writing, will be entitled to bring such infringement action or any other appropriate action or claim at its own expense. The party conducting such action will consider in good faith the other party's comments on the conduct of such action and will have full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms, any such suit, action or proceeding and the other party will in good faith execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation. SENOMYX will be entitled to [***] based on a [***] basis. The party conducting the action will have the right to deduct all court costs it pays for such enforcement from any recovery from any settlement or judgment that is attributable to the losses of the other party under such action.

        13.2    Defense of Infringement Claims for KO Technology     

        SENOMYX will cooperate with KO, at KO's expense, in the defense of any suit, action or proceeding against SENOMYX or KO alleging the infringement of the intellectual property rights of a Third Party due to KO's or SENOMYX's use of any KO technology licensed to SENOMYX under this Agreement. The parties must notify each other promptly in writing of the commencement of any such suit, action, proceeding or claim of infringement. At the expense of KO, SENOMYX will give to KO full and sole authority, information and assistance necessary to defend, hire counsel, make decisions or settle on any terms, any such suit, action or proceeding and KO will execute all documents, provide pertinent records, and take all other actions, including requiring persons within its control to give testimony, which may be reasonably required in connection with the defense or settlement of such litigation.

14.   TREATMENT OF CONFIDENTIAL INFORMATION: REPORTING REQUIREMENTS, PUBLICITY, LAW AND REGULATIONS

        14.1    Confidentiality     

        Subject to the terms and conditions of this Agreement, SENOMYX and KO each agree that, during the Term and for a period of [***] years thereafter, it will keep confidential, and will cause its Affiliates to keep confidential, all Confidential Information that is disclosed to it or to any of its Affiliates by the other party. Neither SENOMYX nor KO nor any of their respective Affiliates will use the other party's Confidential Information except as expressly permitted in this Agreement.

        14.2    Disclosure to Related Parties     

        SENOMYX and KO each agree that any disclosure of the other party's Confidential Information to any officer, employee, contractor, consultant, sublicensee or agent of the other party or to any of its Affiliates:

17


        Each party will use reasonable efforts to take such action, and to cause its Affiliates to take such action, to preserve the confidentiality of each other's Confidential Information, which will be the same efforts as it would customarily take to preserve the confidentiality of its own similar Confidential Information.

        14.3    Return of Confidential Material     

        Upon termination of this Agreement, each party, upon the other party's request, will return or destroy all Confidential Information received from the other party pursuant to this Agreement, including all copies and extracts of documents, within 30 days of the request of the other party; provided, however, one copy of the Confidential Information may be retained in a secure location with limited access for legal purposes only.

        14.4    Exceptions to Confidential Information     

        Confidential Information will not include any information, which the receiving party can prove by competent written evidence:

        A party may also disclose Confidential Information of the other party where required to do so by law or legal process; provided, however, that, in such event, the party required to disclose such information must give advance written notice of such disclosure to the other party and must cooperate with the other party's efforts to seek, at the request and expense of the other party, all confidential treatment and protection for such disclosure as is permitted by applicable law.

        14.5    Confidential Financial Information     

        The parties agree that the material financial terms of this Agreement will be considered Confidential Information of both parties. Notwithstanding the foregoing, either party may disclose such terms in legal proceedings or as are required to be disclosed in its financial statements, by law, or under an obligation of confidentiality to bona fide potential sublicensees. Either party will have the further right to disclose the material financial terms of this Agreement under an obligation of confidentiality to any potential acquirer, merger partner, bank, venture capital firm, or other financial institution to obtain financing.

        14.6    Confidential Research Information     

        The parties agree that all results and data generated from the research under the Collaborative R&D Program will be owned exclusively by SENOMYX and considered Confidential Information of SENOMYX subject to the confidentiality requirements of Section 14. KO will not provide to a Third Party any Materials provided by SENOMYX to KO.

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        14.7    Permitted Use and Disclosures     

        Each party may use or disclose Confidential Information disclosed to it by the other party

        If a party is required to make any such disclosure of the other party's Confidential Information, other than pursuant to a confidentiality agreement, it will give reasonable advance notice of such disclosure to the other party where reasonably possible and, save to the extent inappropriate in the case of patent applications, will use its reasonable efforts to secure confidential treatment of such Confidential Information in consultation with the other party prior to such disclosure (whether through protective orders or otherwise) and disclose only the minimum necessary to comply with such requirements.

        14.8    Use of Data for Promotional Purposes     

        Either party may (i) make public statements regarding Enhancing Compounds, Selected Compounds, Product Compounds or Beverages incorporating Product Compounds by announcing the achievement of milestones therefor, following consultation with the other party and with the written consent of the other party to the form and content of the public statement, and (ii) without the prior consent of the other party, make public statements regarding the overall success rate(s) (excluding any competitively sensitive information of KO) achieved by and/or for its customers with the use SENOMYX Technology; provided, however, that it may not disclose any chemical structures, screens or the other party's identity.

        14.9    Publication of Results     

        Subject to the express provisions of this Agreement, results and data obtained by either party in the course of the collaboration may be submitted for publication by SENOMYX in accordance with SENOMYX's customary practices. SENOMYX will send a copy of the proposed publication to KO and will allow KO [***] from the date of receipt for review, comment and reasonable approval.

        14.10    Publicity     

        Except as required by law and as provided in this Agreement, neither party may make any public announcement or otherwise disclose the terms of this Agreement without the prior written consent of the other party, which consent will not be unreasonably withheld. Notwithstanding the foregoing, the parties will agree upon a press release to announce the execution of this Agreement and the material terms. Thereafter, KO and SENOMYX may each disclose to Third Parties the information contained in such press release without the need for further approval by the other party.

19



        14.11    Reporting, Law and Regulation     

        Each party will, within 30 days of the end of each quarterly Steering Committee meeting, report to the other a written summary of the results of the research and development work it carries out, if any, under this Agreement. Each party agrees to prepare and exchange written and electronic reports concerning any results and data required by either party as supporting information for any regulatory filings. In addition, SENOMYX will provide KO with its audited annual financials reports in a timely manner, subject to certain confidential information being redacted therefrom. The exchange of such report may be reasonably supplemented, at the request of the party receiving the report, by correspondence and/or upon reasonable prior notice, visits to the other party's facilities. While carrying out the obligations set forth in the Agreement, the parties will ensure compliance with all applicable laws and regulations, including, without limitation, all environmental, competition and import and export laws and regulations.

15.   TERM, EARLY CONCLUSION, AND TERMINATION

        15.1    Term     

        The term of this Agreement will begin on the Effective Date and will continue through the end of the Commercialization Period, unless terminated earlier in accordance with the provisions of Section 15.3, or 15.4 hereof (the " Term ").

        15.2    Early Conclusion of the Collaborative R&D Period by KO     

        KO may conclude the Collaborative R&D Program prior to the end of the Collaborative R&D Period, without cause by;

provided, however, if such written notice of early conclusion by KO occurs within the [***] of the Collaborative R&D Period, KO will be obligated to pay the research funding in accordance with Section 9.1 for the [***] . KO's obligations for research funding for the remainder of the Collaborative R&D Period under Section 9.1 will cease. In the event that KO notifies SENOMYX of early conclusion, the rights and obligations provided for under Section 8.1, 8.2, 8.3, and 8.5, the licenses granted under Section 10.4, and 10.5 and the [***] provision under 10.9 will all terminate.

        15.3    Termination By Mutual Agreement     

        The parties may terminate this Agreement at any time, in whole or in part, by mutual written agreement executed by both parties.

        15.4    Termination By KO for Acquisition of SENOMYX By a KO Competitor     

        KO may terminate this Agreement due to the merger or consolidation of SENOMYX by a KO Competitor.

        15.5    Effect of Termination     

        Upon termination of this Agreement pursuant to Section 15.3 or Section 15.4, KO will have no right to practice the Target IP or use the Target IP and all rights, title and interest in and to the Target IP will revert to and become the sole property of SENOMYX.

        Expiration or termination of this Agreement will not relieve the parties of any obligation accruing before such expiration or termination.

20



        15.6    Survival     

        The obligations and rights of the parties under Section 6.3 (ii), Section 9.11, Section 11, Section 14, Section 15.5, Section 15.6, Section 16, and Section 17 and Appendix A, will survive termination or expiration of this Agreement.

16.   WARRANTIES AND INDEMNIFICATION

        16.1    Mutual Representations and Warranties     

        The parties make the following representations and warranties to each other:

        16.2    Corporate Power     

        Each party hereby represents and warrants that, to the best of its knowledge, as of the Effective Date, such party:

        16.3    Due Authorization     

        Each party hereby represents and warrants that, to the best of its knowledge, as of the Effective Date, such party:

        16.4    Binding Agreement     

        Each party hereby represents and warrants to the other that, to the best of its knowledge, as of the Effective Date:

21


        16.5    Warranties Regarding SENOMYX Technology     

        SENOMYX warrants to KO as of the Effective Date the following:

22


        16.6    Warranties Relating to KO Technology     

        KO represents and warrants to SENOMYX as of the Effective Date the following:

23


17.   MISCELLANEOUS

        17.1    Force Majeure     

        Neither party will lose any rights hereunder or be liable to the other party for damages or losses on account of failure of performance by the defaulting party (other than a payment default) if the failure is occasioned by war, fire, explosion, flood, (e.g. El Niño), earthquake, strike, lockout, embargo, act of God, or any other similar cause beyond the control of the defaulting party; provided, however, that the party claiming force majeure has exerted all reasonable efforts to avoid or remedy such force majeure and thereafter takes all reasonable steps to mitigate any such delay in performance hereunder and any damages that may be incurred by the other party thereby.

        17.2    Governing Law and Jurisdiction     

        This Agreement will be governed by the laws of the State of Delaware, as such laws are applied to contracts entered into and to be performed entirely within such state.

        17.3    Binding Effect     

        This Agreement will be binding upon and inure to the benefit of the successors and permitted assigns of the parties.

24



        17.4    Dispute Resolution     

        The parties recognize that disputes as to certain matters may, from time to time, arise during the Term, which relate to either party's rights and/or obligations hereunder. It is the objective of the parties to establish procedures to facilitate the resolution of disputes arising under this Agreement in an expedient manner by mutual cooperation and without resort to arbitration. The parties agree that prior to any arbitration concerning this Agreement, SENOMYX's Chief Executive Officer and KO's president of Coca-Cola Ventures, or another Senior Vice President of KO, will meet in person, or by video-conferencing and will use best efforts to resolve any disputes concerning this Agreement.

        Within 30 days of a formal request by either party to the other party, either party may, by written notice to the other party, have such dispute referred to their respective officers designated, or their successors, for attempted resolution by good faith negotiations, such good faith negotiations to begin within thirty days after such notice is received. Any dispute arising out of or relating to this Agreement which is not resolved between the parties or the designated officers of the parties pursuant to this Section 17.4 will be resolved by final and binding arbitration conducted in San Diego, California (unless the parties mutually agree to another location) in accordance with the rules of the American Arbitration Association. The arbitration will be conducted by an arbitrator who is knowledgeable in the general subject matter at issue in the dispute.

        The parties will agree on the arbitrator and if they cannot agree, the arbitrator will be selected in accordance with the procedures of the American Arbitration Association.

        In conducting the arbitration, the arbitrator will

        The arbitrators will also be able to award damages and recommend injunctions.

        The parties will share equally the arbitrator's fees and expenses pending the resolution of the arbitration.

        The decision of the arbitrator will be final and binding on the parties and may be sued on or enforced by the party in whose favor it runs in any court of competent jurisdiction at the option of such party.

        Notwithstanding anything to the contrary in this Section 17.4, either party may seek immediate injunctive or other interim relief from any court of competent jurisdiction with respect to any breach of Sections 9 or 10 hereof, or otherwise to enforce and protect the Patent Rights, copyrights, trademarks, or other intellectual property rights Controlled by such party. In addition, arbitration will not be used to resolve disputes concerning Patent Rights. Disputes concerning Patent Rights, including, but not limited to, disputes concerning patent ownership, claim language, claim scope and issues of validity will be settled in a court of law. Any arbitration ruling that relies on an interpretation of Patent Rights will have no binding effect in a court of law on any Patent Rights related to this Agreement, unless such Patent Rights have been adjudicated in a court of law. In no event will a demand for arbitration be made after the date when the institution of a legal or equitable proceeding based on such claim, dispute or other matter in question would be barred by the applicable statute of limitations.

25



Notwithstanding the foregoing or the outcome of the arbitration proceeding, each party will bear its own expenses including, without limitation, attorneys fees and court costs, even if the arbitrators have the discretion to award such fees and costs to the prevailing party.

        17.5    Severability     

        If any term of this Agreement or the application thereof to any party or circumstance is, to any extent, held to be invalid or unenforceable, then the remainder of this Agreement, or the application of such term to parties or circumstances other than those as to which it is held invalid or unenforceable, will not be affected thereby and each term of this Agreement will be valid and enforced to the fullest extent permitted by law. The parties agree to renegotiate such term in good faith in order to provide a reasonably acceptable alternative to the term that is invalid or unenforceable, it being the intent of the parties that the basic purposes of this Agreement are to be effectuated.

        17.6    Independent Contractors     

        It is expressly agreed that KO and SENOMYX will be independent contractors and that the relationship between the parties will not constitute a partnership or agency of any kind. Neither KO nor SENOMYX will have the authority to make any statements, representations or commitments of any kind, or to take any action, which will be binding on the other party, without the prior written authorization of the other party to do so.

        17.7    Entire Agreement     

        This Agreement sets forth all of the covenants, promises, agreements, warranties, representations, conditions and understandings between the parties, on the Effective Date, and supersedes and terminates all prior agreements and understandings between the parties, with respect to the subject matter hereof. There are no prior or contemporaneous covenants, promises, agreements, warranties, representations, conditions or understandings, either oral or written, between the parties other than as set forth in this Agreement.

        17.8    Amendment     

        No subsequent alteration, amendment, change or addition to this Agreement will be binding upon the parties unless reduced to writing and signed by the respective authorized officers of the parties.

        17.9    Interpretation     

        This Agreement will not be strictly construed against either party. Any conflict between the terms set forth in the text of this Agreement and the terms of any Appendix hereto will be resolved in favor of the text of this Agreement.

        17.10    Waiver     

        Except as specifically provided for in this Agreement, the waiver from time to time by either of the parties of any rights or the failure to exercise any remedy will not operate or be construed as a continuing waiver of the same right or remedy or any of the other of such party's rights or remedies provided in this Agreement.

        17.11    Construction     

        The term "Article" or "Section" can refer to any single paragraph level found in this Agreement or any collection of multiple paragraphs.

26



        17.12    No Third Party Beneficiaries     

        No Third Party, including any employee of any party to this Agreement (except as specifically provided in this Agreement), will have or acquire any rights by reason of this Agreement. Nothing contained in this Agreement will be deemed to constitute the parties partners with each other or any Third Party.

        17.13    Notices     

        Any notices or communications provided for in this Agreement to be made by either party to the other party must be in writing, in English, and will be made by prepaid air mail or overnight carrier with return receipt addressed to the other party at its address set forth below. Any such notice or communication may also be given by hand, or facsimile to the appropriate designation. Notices will be sent:

If to SENOMYX, to:   SENOMYX, Inc.
11099 North Torrey Pines Road
La Jolla, CA 92037
Facsimile number: (858) 404-0750

Attention: Corporate Counsel with a copy to the President

If to KO, to:

 

The Coca-Cola Company
One Coca-Cola Plaza, N.W
Atlanta, GA 30013
Facsimile number:

Attention: Senior Vice President Technical, with a copy to the Chief Intellectual Property Counsel

        By like notice, either party may specify or change an address to which notices and communications must be thereafter sent. Notices sent by mail, facsimile or overnight carrier will be effective upon receipt and notices given by hand will be effective when delivered.

        17.14    Assignment     

        Not withstanding any provision of this Agreement to the contrary, either party may assign any of its rights or obligations under this Agreement in any country to any Third Party without the prior written consent of the non-assigning party, which consent will not be unreasonably withheld.

        Either party may assign its rights and obligations under this Agreement without the consent of the other party:

        Notwithstanding the foregoing, any such assignment to an Affiliate will not relieve the assigning party of its responsibilities for performance of its obligations under this agreement.

        17.15    Merger or Consolidation     

        This Agreement will survive any merger or consolidation of either party with or into another party and no consent for any such merger, consolidation or similar reorganization will be required.

27



        17.16    Counterparts     

        This Agreement may be executed in two or more counterparts, each of which will be deemed an original, but all of which together will constitute one and the same instrument.

        IN WITNESS WHEREOF, the parties, through their authorized officers, have executed this Agreement as of the Effective Date.

THE COCA-COLA COMPANY    

By:

 

/s/  
DAVID M. TAGGART       

 

 

Title:

 

Vice President and Treasurer


 

 

Date:

 

April 22, 2002


 

 

SENOMYX, INC.

 

 

By:

 

/s/  
PAUL A. GRAYSON       

 

 

Title:

 

Chairman and CEO


 

 

Date:

 

April 22, 2002


 

 

28


COLLABORATIVE RESEARCH, DEVELOPMENT, COMMERCIALIZATION AND LICENSE AGREEMENT

APPENDIX A—DEFINITIONS

        "Affiliate" means any corporation, company, partnership, joint venture, association or other entity, which directly or indirectly controls, is controlled by or is under common control with a party. As used in this definition, the term "control" means direct or indirect beneficial ownership of more than fifty percent (or such lesser percentage which is the maximum allowed to be owned by a foreign corporation in a particular jurisdiction) of the outstanding securities having voting rights for the election of directors in a corporation or of the comparable equity interest in any other type of entity.

        "Agreement" means this agreement, together with all appendices attached hereto, as it may be amended or supplemented from time to time hereafter by a written agreement executed by authorized representatives of both parties.

        "Base Component" has the meaning set forth in Section 9.4.

        "Beverages" means non-alcoholic beverages sold under the Trademarks of KO or its Affiliates made from Beverage Bases.

        "Beverage Base" means [***] .

        "Bottlers" has the meaning set forth in Section 9.4.2.

        "Calendar Year" means a period of a year beginning January 1 and ending December 31.

        "Collaborative R&D Period" means the period beginning on the Effective Date and ending 36 months thereafter, unless concluded earlier in accordance with Section 15.

        "Collaborative R&D Program" has the meaning set forth in Section 3.

        "Commercialization Period" means, in the case of any Product Compound and Beverage or Beverage Base incorporating Product Compounds, the period of time commencing on FEMA GRAS determination of such Product Compound and Beverage or Beverage Base incorporating Product Compounds or if the Steering Committee determines that there is a need for additional safety studies or regulatory approvals as per Section 6.5, upon receipt of such approval, and ending upon the date that there no longer exists a Valid Claim in a Patent Right Controlled by SENOMYX or its Affiliates covering the manufacture, use or sale of such Product Compound, Beverage or Beverage Base incorporating Product Compounds in any country in which the Product Compound, Beverage or Beverage Bases incorporating Product Compounds is sold.

        "Commercialization Plan" has the meaning set forth in Section 7.

        "Competitive Product" means a product in Field I sold by a KO competitor.

        "Compound" means a substance that enhances the [***] .

        "Confidential Information" means all information, Inventions and Know-How disclosed by one party to the other party pursuant to this Agreement, including, without limitation, information and material (whether or not patentable) regarding technology, products, research, development, manufacturing, marketing, finances, personnel or other business information or objectives which is designated as confidential in writing by the disclosing party, whether by letter or by the use of an appropriate stamp or legend, prior to or at the time any such material, trade secret or other information is disclosed by the disclosing party to the other party. Notwithstanding the foregoing to the contrary, Inventions, Know-How or other information which is orally, electronically or visually disclosed by a party, or is disclosed in writing without an appropriate letter, stamp or legend, will constitute Confidential Information of a party if the disclosing party, within 30 days after such disclosure, delivers

29



to the other party a written document or documents describing the Inventions, Know-How or other information and referencing the place and date of such oral, visual, electronic or written disclosure and the names of the persons to whom such disclosure was made.

        "Control" or "Controlled" means, with respect to intellectual property, possession by a party, as of the Effective Date or during the Collaborative R&D Period, of the ability to grant a license or sublicense in accordance with the terms of this Agreement, without violating the terms of any agreement by such party with any Third Party that is in effect on the Effective Date.

        "Consumer Price Index" means the U.S. Department of Labor statistic for All Urban Consumers (CPI-U) U.S. City Average for all items. Changes in the CPI will be measured based on annual average.

        "Cost" or "C" has the meaning set forth in Section 9.4.2.

        "Cost Savings Component" has the meaning set forth in Section 9.4.2.

        "Data Package" has the meaning set forth in Section 5.2.

        "Development Plan" has the meaning set forth in Section 6.

        "Effective Date" means this Agreement becomes effective on the date on which it is signed by the last of the parties required to execute it.

        "Enhancing Compound(s)" means a molecule (not including KO Compound) under the Control of SENOMYX that: (i) has an enhancing effect on the [***] at a concentration of [***] , and (ii) is not [***] at a concentration of [***] .

        "FEMA GRAS" means the process by which a compound is determined to be Generally Recognized as Safe by the Flavor and Extract Manufacturers Association expert panel.

        "Field I" means [***] .

        "Field II" means [***] .

        "Fields" means both Field II and I.

        "High-Potency [***] " will have the meaning set forth in Section 8.5.

        "Invention" means any invention, including any new and useful process, method, or composition of matter, or improvement thereto, whether or not patentable, made in the course of the Collaborative R&D Program.

        "Joint Invention" has the meaning set forth in Section 11.4.

        "Joint Patent Rights" means all Patent Rights containing one or more claims to a Joint Invention.

        "Know-How" means information and data, whether or not patentable, which is not generally known to the public, including, without limitation, designs, concepts, formulae, software, techniques, practices, processes, methods, knowledge, skill, experience, expertise, technical information, Materials and data, including pharmacological, toxicological and clinical test data, analytical and quality control data, patent and legal data or marketing, sales and manufacturing data.

        "KO Compound" means the specific compound identified by KO as having a [***] effect for [***] , the structure of which will be disclosed to SENOMYX by KO no later than [***] following the Effective Date.

        "KO Know-How" means all Know-How Controlled by KO provided to SENOMYX for the activities to be conducted under this Agreement.

30



        "KO Patent Rights" means all Patent Rights Controlled by KO, including, without limitation, any Patent Rights containing one or more claims to an Invention made solely by employees or agents of KO, but excluding any Joint Patent Rights, provided to SENOMYX for the activities to be conducted under this Agreement.

        "KO Related Compounds" means the specific set of [***] effect for [***] , the structures of which will be disclosed to SENOMYX by KO no later than [***] following the Effective Date.

        "KO Technology" means KO Patent Rights and KO Know-How.

        "Materials" mean antagonists, agonists, inhibitors, compounds, and chemicals, including without limitation, Enhancing Compounds, Selected Compounds, and Product Compounds.

        "Net Sales" means, with respect to a Beverage Base, the gross amount invoiced by KO and its Affiliates on any sales or other transfer of the Beverage Base, less the following items:

        Net Sales will be determined from the books and records of KO and its Affiliates maintained in accordance with United States generally accepted accounting principles.

        "Patents" means all patent and patent applications which are controlled by SENOMYX as of the Effective Date or developed by SENOMYX in the course of the Collaborative R&D Period under the Research Plan which specifically claim a Product Compound, a process for manufacturing a Product Compound, or the use of a Product Compound in a Beverage or Beverage Base.

        "Patent Rights" means all rights associated with all U.S. or foreign (including regional authorities such as the European Patent Office) regular or provisional patents or patent applications, including any continuation, continuation-in-part, or division thereof or any substitute application therefor or equivalent thereof, and any patent issuing thereon, including any reissue, reexamination or extension thereof and any confirmation patent or registration patent or patent of additions based on any such patent.

        "Product Compounds" means Selected Compounds used by KO in Beverages or Beverage Bases.

        "Research Plan" has the meaning set forth in Section 5.

        "Royalty Shortfall" has the meaning set forth in Section 9.5.

        "Selected Compound(s)" has the meaning set forth in Section 5.4.

        "SENOMYX Know-How" means all Know-How, which is not covered by the SENOMYX Patent Rights, but is necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which is Controlled by SENOMYX as of the Effective Date or developed by SENOMYX in the course of the Collaborative R&D Program.

31



        "SENOMYX Patent Rights" mean all Patent Rights that are necessary or appropriate for purposes of the activities to be conducted under this Agreement, and which are Controlled by SENOMYX as of the Effective Date or developed by SENOMYX in the course of the Collaborative R&D Program, but excluding any Joint Patent Rights.

        "SENOMYX Technology" means all of the SENOMYX Patent Rights and SENOMYX Know-How, including Target IP.

        "Steering Committee" has the meaning set forth in Section 4.

        "Target IP" means the SENOMYX Patent Rights and SENOMYX Know-How on the composition of matter and use of (i) Enhancing Compounds, (ii) Selected Compounds and (iii) Beverages and Beverages incorporating Product Compounds.

        "Target [***] " means any of the following [***] .

        "Target [***] Price" or "TSP" has the meaning set forth in Section 9.4.2.

        "Term" has the meaning set forth in Section 15.1.

        "Third Party(ies)" means any party other than a party to this Agreement excluding Affiliates of SENOMYX or KO or Bottlers.

        "Unit Case" means the equivalent of [***] .

        "Valid Claim" means a claim under an issued patent or patent application within the Patent Rights, which has not (i) expired or been canceled, (ii) been declared invalid by an unreversed and unappealable decision of a court or other appropriate body of competent jurisdiction, (iii) been admitted to be invalid or unenforceable through reissue, disclaimer or otherwise, and/or (iv) been abandoned.

        For a given Enhancing Compound with an associated enhancement factor A, A multiplied by X will always equal 1.

        The following examples illustrate the definition:

32


COLLABORATIVE RESEARCH, DEVELOPMENT, COMMERCIALIZATION AND LICENSE AGREEMENT

APPENDIX B—RESEARCH PLAN

KO Responsibility

  Steering Committee Responsibility
  SENOMYX Responsibility
  Cumulative Time (months)

1. Assign two representatives to the Steering Committee.
2. Disclose to SENOMYX the
[***] and the [***] .
3. Provide SENOMYX with a
[***] .

 

 

 

1. Assign two representatives to the Steering Committee.
2. Test KO Compound for
[***] .

 

Within
[***] of the Effective Date


1. Review with SENOMYX,
[***] on [***] and [***] enhancers as is relevant to the [***] enhancer discovery program.
2. Describe
[***] conditions of products that may be important for an [***] .


 


1. Hold first Meeting.
2. Review and, if necessary, amend the Research Plan.
3. Review information (including
[***] testing results) on [***] and [***] .
4. Establish which of the
[***] are to be [***] and tested in [***] .


 


Review with KO,
[***] on [***] and [***] enhancers as is relevant to the [***] enhancer discovery program.
2. Present progress and status of the project including the results of
[***] .
3. Apply information on properties and characteristics of
[***] to the design and discovery of [***] .


 


At first Steering Committee Meeting.

 

 

5. Discuss
[***] for evaluating Enhancing Compounds in [***] in [***] and in [***] . Plan to reach consensus on [***] .
6. Agree on mechanism for communication of program results (e.g., reports, etc.) and scientific discussions (telephone, email and visits) in between Steering Committee Meetings.

 

3. Identify and prioritize
[***] for [***] .
4. Identify
[***] and provide updates [***] .

 

At first Steering Committee meeting (continued from above)
             

33



 

 

 

 

1. Initiate
[***] of the designated [***] of compounds.

 

[***]

 

 

1. Hold Meeting.

 

1. Present progress and status of
[***] .
2 Evaluate the designated
[***] in the [***] at a range of relevant [***] .

 

[***]

 

 

 

 

1. Use
[***] results to design additional [***] .
2.
[***] .
3.
[***] in the [***] for compounds that exhibit [***] .

 

[***]

 

 

 

 

1. Develop
[***] for additional desired characteristics [***] as defined by the Steering Committee. Test certain [***] .

 

[***]

 

 

 

 

1.
[***] at least [***] . Results will be tabulated as [***] at a given [***] .

 

[***]

 

 

 

 

1. Generate
[***] , and determine the effective [***] with each of the [***] .

 

[***]

 

 

1. Hold Meeting.
2. Review and amend, if necessary, the Research Plan going forward.
3. Review and approve minutes from previous meeting

 

1. Share progress and status of project including progress toward
[***] .

 

[***]
             

34



 

 

 

 

1. Determine SENOMYX
[***] the compounds that are [***] for initial [***] of compounds with [***] and the [***] levels to be [***] .

 

[***]

1. Participate in
[***] .

 

 

 

1. Perform initial
[***] or have the tests performed by [***] .

 

[***]

 

 

1. Hold Meeting.
2. Review and approve minutes from previous meeting.

 

1. Share progress and status of project.

 

[***]


 


 


1. Hold Meeting.
2. Review and amend, if necessary, the Research Plan.
3. Review and approve minutes from previous meeting.
4. Review and approve
[***] .


 


1. Share progress and status of project including progress toward
[***] .
2. Complete
[***] of at least [***] .
3. Expect
[***] . Inform Steering Committee of [***] regarding compounds that [***] .


 


[***]

 

 

 

 

1. Continue
[***] and [***] to identify compounds with [***] .

 

[***]

 

 

1. Hold Meeting.
2. Review and approve minutes from previous meeting.

 

1. Share progress and status of project.

 

[***]

 

 

 

 

1. Coordinate
[***] and [***] tests on certain compounds.

 

[***]
             

35




1. Provide SENOMYX with
[***] .
2. Collaborate with SENOMYX to prepare and evaluate
[***] .


 


1. Coordinate
[***] .


 


1. Prepare
[***] .
2. Perform
[***] according to agreed [***] .
3. Perform
[***] and other relevant tests [***] .
4. Conduct
[***] for certain compounds.


 


[***]

1. Review
[***] .

 

1. Hold Meeting.
2. Review and amend, if necessary, the Research Plan.
3. Review and approve minutes from previous meeting.

 

1. Share progress and status of project.
2. Identify
[***] that best meet the requirements of [***] .

 

[***]

 

 

4. Review and approve
[***] .

 

3. Prepare
[***] .
4. Review the
[***] and provide [***] will be determined by the Steering Committee.
5. Expect
[***] .

 

[***]

1. Coordinate
[***] .

 

 

 

1. Initiate
[***] for use in the [***] may be initiated prior to [***] .

 

[***]

 

 

1. Hold Meeting.

 

1. Share progress and status of project.

 

[***]


1. Present analysis of
[***] of the [***] .


 


1. Hold Meeting.
2. Select
[***] .
3. Agree to
[***] achieved by the [***] . [***]
4. Initiate
[***] for the [***] .


 


1. Present status on
[***] and relevant [***] .


 


[***] .
             

36



 

 

 

 

1. Continue
[***] of compounds and evaluate them in the [***] . [***] 2. Inform KO on new [***] .

 

[***]

 

 

Review status of research program and make decisions regarding
[***] .

 

 

 

[***]

37


COLLABORATIVE RESEARCH, DEVELOPMENT, COMMERCIALIZATION AND LICENSE AGREEMENT

APPENDIX C—DEVELOPMENT PLAN

KO Responsibility

  Steering Committee Responsibility
  SENOMYX Responsibility
  Cumulative Time (months)

 

 

1. Review and, if necessary, amend the Development Plan.

 

1. Develop
[***] process(es) for [***] and set [***] .
2. Contract with
[***] or equivalent [***] to coordinate and/or perform the [***] .
3. Prepare
[***] .

 

[***]

1. Develop
[***] for initial [***] .

 

 

 

 

 

[***]

1. Present the
[***] .

 

 

 

 

 

[***]

 

 

1. Review
[***] .

 

1. Complete preparation of
[***] .

 

[***]

 

 

 

 

1. Submit
[***] for [***] .

 

[***]

 

 

1. Hold Meeting.
[***]
2. Review and approve
[***] .

 

1. Expect
[***] for the Selected Compound(s) and [***] .

 

[***]

 

 

1. Decide upon any additional
[***] that would be performed on a Selected Compound(s), the additional [***] to be obtained for a Selected Compound(s), and the [***] associated with such activities.

 

 

 

[***]

38


COLLABORATIVE RESEARCH, DEVELOPMENT, COMMERCIALIZATION AND LICENSE AGREEMENT

APPENDIX D—COMMERCIALIZATION PLAN

        [Intentionally Omitted.]

39



COLLABORATIVE RESEARCH, DEVELOPMENT, COMMERCIALIZATION AND LICENSE AGREEMENT

Appendix E—Exceptions to KO rights to KO Compound (To be provided by KO)

40


***Text Omitted and Filed Separately
with the Securities and Exchange Commission.
Confidential Treatment Requested
Under 17 C.F.R. Sections 200.80(b)(4),
200.83 and 230.406.

FIRST AMENDMENT TO
COLLABORATIVE RESEARCH, DEVELOPMENT,
COMMERCIALIZATION AND LICENSE AGREEMENT

        This Amendment is entered into as of April 7, 2004, by and between SENOMYX, INC. , a Delaware corporation having its principal place of business at 11099 North Torrey Pines Road, La Jolla, CA 92037 (" SENOMYX ") and THE COCA-COLA COMPANY , a Delaware corporation, having its principal place of business at One Coca-Cola Plaza, Atlanta, Georgia 30313 (" KO ").

BACKGROUND

         WHEREAS , SENOMYX and KO have previously entered into that certain Collaborative Research, Development, Commercialization and License Agreement, dated as of April 22, 2002 (the "Original Agreement"); and

         WHEREAS , the parties hereto have agreed to amend the Original Agreement, and desire to enter into this Amendment for the purpose of documenting such amendment as required by Section 17.8 of the Original Agreement.

         NOW, THEREFORE, in consideration of the foregoing premises, the parties hereby agree to amend the Original Agreement as follows:

AGREEMENT

1.
Section 3 of the Original Agreement shall be amended by deleting the final sentence thereof, and inserting a new sentence in substitution therefor which shall read as follows:
2.
Section 9.1.2 of the Original Agreement shall be amended by deleting the same in its entirety, and by inserting in substitution therefor a new Section 9.1.2 which shall read as follows:
3.
Section 10.12 of the Original Agreement is hereby amended to delete the word "exclusive" where it appears therein, and to insert in substitution therefor the word "non-exclusive."

4.
Section 15.2 of the Original Agreement shall be amended as follows:

    (a)
    By inserting "(a)" prior to the initial text of said Section, such that all such text shall be denominated as Section 15.2(a); and

1


5.
Section 16.6.3(i) of the Original Agreement is hereby amended by deleting the word "SENOMYX's" which appears therein, and inserting in substitution therefor the word "KO's."

6.
Section 17.14 of the Original Agreement is hereby amended by deleting the word "either" which appears in the first sentence therein, and by inserting in substitution therefor the word "neither."

7.
Appendix A of the Original Agreement shall be amended by deleting the definition "Collaborative R&D Period" and by inserting in substitution therefor the following new definition:
8.
Except for the aforesaid amendments, the Original Agreement shall remain in full force and effect in accordance with the original terms thereof. The parties do hereby ratify and reaffirm all of their obligations under the Original Agreement, as amended by this Amendment.

         IN WITNESS WHEREOF , the parties, through their authorized officers, have executed this Amendment as of the date set forth hereinabove.

THE COCA-COLA COMPANY    

 

 

 

 
By: /s/   RALPH CARLTON       
   
Title: Vice President
   
Date:      
 
   

 

 

 

 
SENOMYX, INC.    

 

 

 

 
By: /s/   KENT SNYDER       
   
Title: President & CEO
   
Date: April 7, 2004
   
       

2




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Exhibit 23.1


Consent of Ernst & Young LLP
Independent Registered Public Accounting Firm

        We consent to the references to our firm under the captions "Selected Financial Data" and "Experts" and to the use of our report dated March 23, 2004 (except Note 8, as to which the date is June 7, 2004) in Amendment No. 4 to the Registration Statement (Form S-1 No. 333-113998) and related Prospectus of Senomyx, Inc. for the registration of 6,000,000 shares of its common stock.

San Diego, California
June 7, 2004




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