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As filed with the Securities and Exchange Commission on April 29, 2005

Registration No. 333-121646



UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549


AMENDMENT NO. 2
TO
FORM S-1
REGISTRATION STATEMENT
Under
The Securities Act of 1933


SUNESIS PHARMACEUTICALS, INC.
(Exact name of registrant as specified in its charter)


Delaware   2834   94-3295878
(State or other jurisdiction of
incorporation or organization)
  (Primary Standard Industrial
Classification Code Number)
  (I.R.S. Employer
Identification Number)

341 Oyster Point Boulevard
South San Francisco, California 94080
(650) 266-3500
(Address, including zip code, and telephone number, including area code, of registrant's principal executive offices)


Daniel N. Swisher, Jr.
Chief Executive Officer
Sunesis Pharmaceuticals, Inc.
341 Oyster Point Boulevard
South San Francisco, California 94080
(650) 266-3500
(Name, address, including zip code, and telephone number, including area code, of agent for service)


Copies to:

Alan C. Mendelson
William C. Davisson
Latham & Watkins LLP
135 Commonwealth Drive
Menlo Park, California 94025
(650) 328-4600
  Laura A. Berezin
John T. McKenna
Cooley Godward LLP
3000 El Camino Real
Palo Alto, California 94306
(650) 843-5000

         Approximate date of commencement of proposed sale to the public: As soon as practicable after the effective date of this registration statement.

        If any of the securities being registered on this form are to be offered on a delayed or continuous basis pursuant to Rule 415 under the Securities Act of 1933, check the following box.  o

        If this form is filed to register additional securities for an offering pursuant to Rule 462(b) under the Securities Act, please check the following box and list the Securities Act registration statement number of the earlier effective registration statement for the same offering.  o

        If this form is a post-effective amendment filed pursuant to Rule 462(c) under the Securities Act, check the following box and list the Securities Act registration statement number of the earlier effective registration statement for the same offering.  o

        If this form is a post-effective amendment filed pursuant to Rule 462(d) under the Securities Act, check the following box and list the Securities Act registration statement number of the earlier effective registration statement for the same offering.  o

        If delivery of the prospectus is expected to be made pursuant to Rule 434, please check the following box.  o


         The registrant hereby amends this registration statement on such date or dates as may be necessary to delay its effective date until the registrant shall file a further amendment which specifically states that this registration statement shall thereafter become effective in accordance with Section 8(a) of the Securities Act of 1933 or until the registration statement shall become effective on such date as the Commission acting pursuant to said Section 8(a) may determine.




The information in this prospectus is not complete and may be changed. We may not sell these securities until the registration statement filed with the Securities and Exchange Commission is effective. This prospectus is not an offer to sell these securities and is not soliciting an offer to buy these securities in any state where the offer or sale is not permitted.

SUBJECT TO COMPLETION, DATED APRIL 29, 2005

                  Shares

GRAPHIC

Common Stock


        Prior to this offering, there has been no public market for our common stock. The initial public offering price of our common stock is expected to be between $            and $            per share. We have applied to have our stock approved for quotation on the Nasdaq National Market under the symbol "SNSS."

        We have granted the underwriters an option to purchase, on the same terms and conditions set forth below, a maximum of            additional shares if the underwriters sell more than            shares in this offering.

         Investing in our common stock involves risks. See "Risk Factors" beginning on page 8.

 
  Price to
Public

  Underwriting
Discounts and
Commissions

  Proceeds to Sunesis
Pharmaceuticals, Inc.

Per Share   $                     $                     $                  
Total   $                     $                     $                  

        Delivery of the shares of common stock will be made on or about                              , 2005.

        Neither the Securities and Exchange Commission nor any state securities commission has approved or disapproved of these securities or determined if this prospectus is truthful or complete. Any representation to the contrary is a criminal offense.

Lehman Brothers SG Cowen & Co.

Needham & Company, LLC

The date of this prospectus is                              , 2005




TABLE OF CONTENTS

 
  PAGE
PROSPECTUS SUMMARY   1
RISK FACTORS   8
SPECIAL NOTE REGARDING FORWARD-LOOKING STATEMENTS   25
USE OF PROCEEDS   26
DIVIDEND POLICY   26
CAPITALIZATION   27
DILUTION   28
SELECTED FINANCIAL DATA   30
MANAGEMENT'S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS   31
CONVERSION OF PREFERRED STOCK AND REVERSE STOCK SPLIT   41
BUSINESS   43
MANAGEMENT   68
CERTAIN RELATIONSHIPS AND RELATED PARTY TRANSACTIONS   83
PRINCIPAL STOCKHOLDERS   85
DESCRIPTION OF CAPITAL STOCK   89
U.S. FEDERAL INCOME TAX CONSEQUENCES TO NON-U.S. HOLDERS   93
SHARES ELIGIBLE FOR FUTURE SALE   96
UNDERWRITING   98
LEGAL MATTERS   102
EXPERTS   102
WHERE YOU CAN FIND MORE INFORMATION   102
INDEX TO FINANCIAL STATEMENTS   F-1

         You should rely only on the information contained in this prospectus. We have not, and the underwriters have not, authorized anyone to provide you with information that is different. This prospectus may only be used where it is legal to sell these securities. The information in this prospectus is only accurate as of the date of this prospectus, but the information may have changed since that date.

         Until                        , 2005, all dealers that effect transactions in these securities, whether or not participating in this offering, may be required to deliver a prospectus. This is in addition to the dealers' obligation to deliver a prospectus when acting as underwriters and with respect to their unsold allotments or subscriptions.



PROSPECTUS SUMMARY

         This summary highlights key aspects of the information contained elsewhere in this prospectus. This summary does not constitute all the information you should consider before investing in our common stock. You should read the entire prospectus carefully, especially the risks of investing in our common stock that we discuss in "Risk Factors" and our audited financial statements and related notes included elsewhere in this prospectus.

Sunesis Pharmaceuticals, Inc.

Overview

        We are a clinical-stage biopharmaceutical company focused on the discovery, development and commercialization of novel small molecule therapeutics for oncology, inflammatory diseases and other unmet medical needs. We have built our product candidate portfolio through internal discovery and the in-licensing of novel cancer therapeutics. We are advancing our product candidates through in-house research and development efforts and strategic collaborations with leading pharmaceutical and biopharmaceutical companies. We believe the quality and breadth of our product candidate pipeline, platform technology, strategic collaborations and scientific team will enable us to become a fully integrated biopharmaceutical company with a diversified portfolio of novel therapeutics for major diseases.

        We are advancing three proprietary oncology product candidates, SNS-595, SNS-032 and an Aurora kinase inhibitor. All three are novel inhibitors of the cell division process, known as the cell-cycle, and these inhibitors are intended for the treatment of cancer. We are currently conducting two Phase I clinical trials with our lead product candidate, SNS-595, and we expect to commence up to two Phase II clinical trials in various types of solid tumors and one Phase Ib clinical trial in certain leukemias in the second half of 2005. We plan to commence a Phase I clinical trial with our second most advanced product candidate, SNS-032, in the second half of 2005. This compound was in-licensed from Bristol-Myers Squibb Company, or BMS, in April 2005. We are also developing an Aurora kinase inhibitor for the treatment of cancer, which we expect to enter Phase I clinical trials in 2006. We have worldwide development and commercialization rights to SNS-595, SNS-032 (for diagnostic and therapeutic applications) and our Aurora kinase inhibitors program.

        We have developed a proprietary method of discovering drugs in pieces, or fragments. We call this fragment-based discovery approach "Tethering." Tethering is a process whereby a target protein known to be involved in a disease process is engineered to facilitate the binding of small drug fragments. Once a small fragment is identified, the fragment is built out using the target protein's surface as a template to make a new full-size therapeutic compound. We combine Tethering with other drug discovery tools, such as structure-based design and medicinal chemistry, to discover and develop novel therapeutics for major diseases. In addition to its use in our internal drug discovery efforts, Tethering is the basis of our five strategic collaborations with Biogen Idec, Johnson & Johnson PRD and Merck. In the last year, each of our current collaboration partners has either extended its existing collaboration or entered into a new collaboration with our company. We believe that our strategic collaborations will enable us to leverage and expand our internal development capabilities, manage our cash expenditures and diversify risk across our pipeline.

Our Programs

        SNS-595 is a novel cell-cycle inhibitor that we believe represents a new class of anti-tumor drugs. We believe that SNS-595 induces cell death by inhibiting the cell-cycle in a different way than any other cell-cycle inhibitor. In preclinical studies, SNS-595 demonstrated broad anti-tumor activity. In June 2004, we began the first of two Phase I clinical trials to evaluate doses and schedules of

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administration in patients with advanced solid tumors. We plan to commence up to two Phase II clinical trials in various types of solid tumors and one Phase Ib clinical trial in certain leukemias in the second half of 2005. We currently plan to design these trials to evaluate SNS-595 as a stand-alone therapy in patients with small cell and non-small cell lung cancers and a type of leukemia involving white blood cells, known as acute myelocytic leukemia. In addition, in 2006 we intend to commence Phase II clinical trials to evaluate SNS-595 as a stand-alone therapy and Phase Ib clinical trials to evaluate SNS-595 in combination with standard treatments in additional tumor types. We obtained worldwide development and commercialization rights to SNS-595 from Dainippon Pharmaceutical through a license agreement in 2003.

        SNS-032 is a novel targeted inhibitor of certain cyclin-dependent kinases including CDK2, CDK7 and CDK9. Kinases are enzymes critical in the communication and relay of signals to promote cell growth and function and cyclin-dependent kinases relay signals in the cell cycle. SNS-032 is a broadly active inhibitor of the proliferation of tumor cell lines. We believe that the observed cell death caused by this inhibitor is the result of cell cycle arrest. In preclinical studies, SNS-032 has demonstrated broad anti-tumor activity in multiple mouse and human tumor models, including breast, ovarian, colorectal and skin cell cancers. BMS has conducted three Phase I dose-escalation clinical trials evaluating the safety and tolerability of SNS-032 at three different dosing regimens in approximately 135 patients with refractory solid tumors. We plan to commence a new Phase I clinical trial of SNS-032 in the second half of 2005. We currently plan to design this trial to evaluate the safety and tolerability of frequent, repeated exposure to SNS-032 as a stand-alone therapy in patients with advanced solid tumors. We obtained worldwide rights to develop and commercialize SNS-032 for diagnostic and therapeutic applications from BMS through a license agreement in April 2005.

        We are applying Tethering in several programs to discover and develop novel cancer therapeutics that inhibit other kinases.

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Our Fragment-Based Drug Discovery Approach

        We are applying Tethering to discover and develop novel therapeutics for major diseases. Tethering allows us to screen drug fragments based on binding properties, which enables us to potentially identify compounds that may not be discovered through conventional methods of drug discovery. We believe that this capability allows us to efficiently design product candidates that bind to sites or regions on a specific protein not readily accessed by other discovery methods. Tethering is applicable to most proteins, and we have used Tethering on over 15 different protein targets to date.

Our Strategy

        We are focused on discovering, developing and commercializing small molecule therapeutics for oncology, inflammatory diseases and other unmet medical needs. The key elements of our business strategy are as follows:

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Risks Related to Our Business

        We are a clinical-stage biopharmaceutical company subject to a number of risks that you should be aware of before you decide to buy our common stock. In particular, all of our product candidates are in Phase I clinical trials or earlier, and we have not received regulatory approval for any product candidate. It is possible that we may never successfully commercialize any of our product candidates. While we have received revenue from our research collaborations and grants and fellowships, we have not generated any revenue to date from product sales. As of December 31, 2004, we had an accumulated deficit of $93.4 million, and we expect to continue to incur substantial losses for the foreseeable future. These risks are discussed more fully in "Risk Factors."


Corporate Information

        We were incorporated in Delaware in February 1998 as Mosaic Pharmaceuticals, Inc., and we subsequently changed our name to Sunesis Pharmaceuticals, Inc. Our principal executive offices are located at 341 Oyster Point Boulevard, South San Francisco, California 94080, and our telephone number is (650) 266-3500. Our website address is www.sunesis.com . Information contained in, or accessible through, our website is not a part of this prospectus. References in this prospectus to "we," "us," "our," "our company" or "Sunesis" refer to Sunesis Pharmaceuticals, Inc.

        Sunesis, Tethering and  LOGO , our logo, are registered trademarks of our company. All other trademarks, trade names and service marks appearing in this prospectus are the property of their respective owners.

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The Offering

Common stock offered by Sunesis:                     shares

Common stock to be outstanding after the offering:

 

                  shares

Proposed Nasdaq National Market symbol:

 

SNSS

Use of proceeds:

 

We intend to use our net proceeds to fund clinical and preclinical development of our product candidates, to discover additional product candidates, to repay outstanding indebtedness and for general corporate purposes, including capital expenditures and working capital. We may use a portion of our net proceeds to in-license product candidates or to invest in businesses or technologies that we believe are complementary to our own. See "Use of Proceeds."

        The number of shares of common stock to be outstanding after this offering is based on 40,742,313 shares of common stock outstanding as of December 31, 2004. The number of shares of common stock to be outstanding after this offering excludes, as of December 31, 2004:

Unless specifically stated, all information contained in this prospectus:

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Summary Financial Data

        The following summary financial data should be read in conjunction with "Selected Financial Data," "Management's Discussion and Analysis of Financial Condition and Results of Operations" and our audited financial statements and related notes included elsewhere in this prospectus. We derived the statements of operations data for the years ended December 31, 2002, 2003 and 2004, as well as the balance sheet data as of December 31, 2004, from our audited financial statements included elsewhere in this prospectus. Our historical results are not necessarily indicative of results to be expected in any future period.

 
  Year Ended December 31,
 
 
  2002
  2003
  2004
 
 
  (in thousands, except share
and per share data)

 
Statements of Operations Data:                    
Revenue:                    
  Collaboration revenue   $ 3,170   $ 6,842   $ 5,938  
  Collaboration revenue from related party     32     857     4,201  
  Grant and fellowship revenue     1,474     561     166  
   
 
 
 
    Total revenue     4,676     8,260     10,305  
   
 
 
 
Operating expenses:                    
  Research and development     18,441     21,326     23,616  
  General and administrative     6,179     6,136     7,352  
   
 
 
 
      Total operating expenses     24,620     27,462     30,968  
   
 
 
 
Loss from operations     (19,944 )   (19,202 )   (20,663 )
Interest income     1,360     713     518  
Interest expense     (594 )   (521 )   (387 )
Other income (expense), net     (4 )   5     2  
   
 
 
 
Net loss   $ (19,182 ) $ (19,005 ) $ (20,530 )
   
 
 
 
Basic and diluted net loss per share   $ (4.41 ) $ (3.80 ) $ (3.71 )
   
 
 
 
Shares used in computing basic and diluted net loss per share     4,351,983     4,996,859     5,533,739  
   
 
 
 
Pro forma basic and diluted net loss per share (unaudited)               $ (0.53 )
               
 
Shares used in computing pro forma basic and diluted net loss per share (unaudited)                 38,637,365  
 
  As of December 31, 2004
 
  Actual
  Pro Forma
As Adjusted

 
  (unaudited)

 
 
(in thousands)

Balance Sheet Data:          
Cash, cash equivalents and marketable securities   $ 36,812    
Working capital     27,707    
Total assets     43,026    
Long-term debt     4,438    
Convertible preferred stock     108,813    
Common stock and additional paid-in capital     6,494    
Accumulated deficit     (93,417 )  
Total stockholders' equity (deficit)     (90,044 )  

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        See Note 2 to our audited financial statements for a description of the method used to compute shares used in computing basic and diluted net loss per common share and shares used in computing pro forma basic and diluted net loss per common share.

        The pro forma as adjusted data reflect, based on an assumed initial public offering price of $                per share, (i) the conversion of our outstanding preferred stock into shares of common stock in connection with this offering and (ii) the receipt of net proceeds from the sale of                shares of common stock in this offering, after deducting underwriting discounts and commissions and estimated offering expenses. See "Conversion of Preferred Stock and Reverse Stock Split."

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RISK FACTORS

         Investing in our common stock involves a high degree of risk. You should carefully consider the risks and uncertainties described below and all information contained in this prospectus before you decide to purchase our common stock. If any of the possible adverse events described below actually occurs, we may be unable to conduct our business as currently planned and our financial condition and operating results could be harmed. In addition, the trading price of our common stock could decline due to the occurrence of any of these risks, and you may lose all or part of your investment. Please see "Special Note Regarding Forward-Looking Statements."

Risks Related to Our Business

We have incurred losses since inception and anticipate that we will continue to incur losses for the foreseeable future. We may not ever achieve or sustain profitability.

        We are a clinical-stage biopharmaceutical company with a limited operating history. We are not profitable and have incurred losses in each year since our inception in 1998. We do not currently have any products that have been approved for marketing, and we continue to incur research and development and general and administrative expenses related to our operations. Our net loss for the years ended December 31, 2004, 2003 and 2002 was $20.5 million, $19.0 million and $19.2 million, respectively. As of December 31, 2004, we had an accumulated deficit of $93.4 million. We expect to continue to incur losses for the forseeable future, and we expect these losses to increase as we continue our research activities and conduct development of, and seek regulatory approvals for, our product candidates, and commercialize any approved drugs. Our losses, among other things, have caused and will continue to cause our stockholders' equity and working capital to decrease. To date, we have derived all of our revenue from collaboration agreements and, to a lesser extent, grants and fellowships. We do not anticipate that we will generate revenue from the sale of products for the forseeable future. If our product candidates fail in clinical trials or do not gain regulatory approval, or if our future products do not achieve market acceptance, we may never become profitable. Even if we achieve profitability in the future, we may not be able to sustain profitability in subsequent periods.

There is a high risk that our drug discovery and development activities will not result in commercial products.

        Our product candidates are in the early stages of drug discovery or development and are prone to the risks of failure inherent in drug development. As of the date of this prospectus, only two of our product candidates, SNS-595 and SNS-032, have been tested in humans. We and our collaboration partners will need to conduct significant additional preclinical studies and clinical trials before we or our collaboration partners can demonstrate that our product candidates are safe and effective to the satisfaction of the U.S. Food and Drug Administration, or FDA, and other regulatory authorities. In our industry, it is unlikely that the limited number of compounds that we have identified as potential product candidates will actually lead to successful product development efforts. Preclinical studies and clinical trials are expensive and uncertain processes that take years to complete. Failure can occur at any stage of the process, and successful preclinical studies and early clinical trials do not ensure that later clinical trials will be successful. Product candidates in later stage trials may fail to show desired efficacy and safety traits despite having progressed through initial clinical trials. A number of companies in the pharmaceutical industry have suffered significant setbacks in advanced clinical trials, even after obtaining promising results in earlier trials.

        We do not know whether our ongoing Phase I clinical trial with SNS-595, our planned Phase I clinical trial with SNS-032 or any other future clinical trials with any of our product candidates will be completed on schedule, or at all, or whether our planned Phase I and Phase II clinical trials will begin

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on time. The commencement of our planned clinical trials could be substantially delayed or prevented by several factors, including:

        The completion of our clinical trials could also be substantially delayed or prevented by several factors, including:

        For example, due to toxicities observed in previous Phase I clinical trials of SNS-032, our planned Phase I clinical trial for the use of SNS-032 to treat human malignancies will be complex and require stringent eligibility criteria, and there will be a limited patient population that will be able to participate in this trial. In addition, our planned dosing regimen for this trial is time-consuming and patients may choose to participate in alternative clinical trials. As a result, we believe that our planned Phase I clinical trial for SNS-032 may be lengthier and more expensive than other Phase I clinical trials. In addition, our clinical trials may be suspended or terminated at any time by FDA, other regulatory authorities, our company or, in some cases, our collaboration partners. Any failure or significant delay in completing clinical trials for our product candidates could harm our financial results and the commercial prospects for our product candidates.

We will require substantial additional funding, which may not be available to us on acceptable terms, or at all.

        We are advancing multiple product candidates through discovery and development. We will need to raise substantial additional capital to continue our discovery, development and commercialization activities. We plan to retain the development and commercialization rights to some of our novel cancer therapeutics at least until we have completed a Phase II clinical trial to maximize our economic upside, which will require substantial expenditures by our company.

        We will need to raise substantial additional capital to:

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        Our future funding requirements will depend on many factors, including but not limited to:


        Until we can generate a sufficient amount of product revenue to finance our cash requirements, which we may never do, we expect to finance future cash needs primarily through public or private equity offerings, debt financings or strategic collaborations. We do not know whether additional funding will be available on acceptable terms, or at all. If we are not able to secure additional funding when needed, we may have to delay, reduce the scope of or eliminate one or more of our clinical trials or research and development programs. In addition, we may have to partner one or more of our product candidate programs at an earlier stage of development, which would lower the economic value of those programs to our company.

Our ongoing Phase I and subsequent clinical trials for our lead product candidates, SNS-595 and SNS-032, may not demonstrate safety or efficacy or lead to regulatory approval.

        Our lead product candidate, SNS-595, is a cytotoxic drug being developed for the treatment of certain types of cancer. SNS-595 is currently being tested in two Phase I clinical trials, which is an early stage of clinical testing that is used, in part, to determine proper dosing levels based on the toxicity of a product candidate at various doses. Cytotoxic cancer drugs promote cancer cell death by inhibiting cell proliferation, and commonly have a narrow dose range between efficacy and toxicity, commonly known as a "therapeutic window." Based on the results of our Phase I clinical trials, we may select a dose for use in future clinical trials that may prove to be ineffective in treating cancer. If our clinical trials result in unacceptable toxicity or lack of efficacy, we may have to terminate further clinical trials for SNS-595. Even if we are able to find a proper dose that balances the toxicity and efficacy of SNS-595, we will be required to conduct extensive additional clinical trials before we are able to seek the regulatory approvals needed to market SNS-595. If clinical trials of SNS-595 are halted, or if they do not show that SNS-595 is safe and effective, our future growth would be limited and we may not have any other product candidates to develop.

        Our second most advanced product candidate, SNS-032, is also a cytotoxic drug that we are developing for the treatment of certain types of cancer. In addition to the risks described above, we are aware of risks that are specific to SNS-032. In previous Phase I clinical trials of SNS-032, significant safety risks were observed in patients who were administered SNS-032 on either a one-hour or a 24-hour infusion once every three weeks. For example, statistically significant increases in certain phases of the cardiac cycle, known as the QT interval, or the corrected QT interval, or QTc, on the electrocardiograms of patients were observed in patients receiving the 24-hour infusion regimen. Increased QT intervals may be associated with increased risk for severe cardiac events. In addition, pronounced, rapidly reversible decreases in white blood cells were observed between 24 and 48 hours

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following infusion under the one-hour infusion regimen, most likely associated with higher peak drug levels in this regimen. Further, some patients also experienced liver toxicity, which limited the amount of drug that could be administered to those patients. BMS did not complete two of these planned Phase I clinical trials and we cannot be certain that BMS did not abandon these trials due to safety concerns. We will not receive regulatory approval for SNS-032 unless we are able to deliver therapeutically active doses of SNS-032 while keeping toxicities at acceptable levels. In our planned Phase I clinical trial, we intend to deliver the drug on a daily basis in a three-hour infusion for five consecutive days. There is a significant risk that this dose and regimen may not allow us to achieve efficacious exposure in the absence of dose-limiting toxicity, and thus SNS-032 may not advance as a single agent therapeutic. Furthermore, due to the extensive safety monitoring required to pursue our planned Phase I clinical trial for SNS-032, the number of eligible patients will likely be more limited than in some other clinical trials, which may delay the timelines for enrollment and completion of this trial.

        In addition, in clinical trials to date SNS-032 has demonstrated variable pharmacokinetics, or PK, which is the measure of the concentration of drug in the bloodstream over time. The PK variability results in differences in drug exposure between patients, and in some cases in the same patient, who are administered the same dose of SNS-032. Dose levels in future Phase II clinical trials will be selected primarily based on safety criteria. Because of the observed PK variability between and among patients, we believe that there is a risk that some patients may receive sub-therapeutic exposure, limiting the opportunity to show activity and efficacy for SNS-032. As with other product candidates in the biotechnology industry at this stage of development, even if we are able to find adequate doses and schedules from our Phase I clinical trials, we will be required to conduct extensive additional clinical trials before we are able to seek regulatory approval to market SNS-032.

Because the mechanism of action of SNS-595 is not fully known, we may not choose appropriate cancer types and dosing regimen in the design of our clinical trials relating to SNS-595.

        Our preclinical studies indicate that SNS-595 causes arrest at a stage of the cell cycle known as the "G2 phase," leading to cell death through apoptosis, or self-destruction of the cell. We do not fully understand the mechanism by which SNS-595 causes cell cycle arrest, known as the "mechanism of action," or if the cell cycle arrest is the cause of cell death. Because we do not fully understand the mechanism of action of SNS-595, we may not choose the optimal cancer types and dosing regimen in the design of our clinical trials, which could impact the outcome of these trials or require us to conduct additional clinical trials.

Our approach to developing cancer therapeutics by inhibiting cyclin-dependent kinases, Aurora kinases and Raf kinases has not been clinically validated and may not be successful.

        We have programs to develop small molecule inhibitors of CDK, Aurora and Raf kinases for the treatment of cancer. The therapeutic benefit of inhibiting CDK, Aurora or Raf kinases in the treatment of human cancer has not been established definitively. Although a competitive kinase inhibitor, BAY 43-9006, is currently in Phase III clinical trials, this compound inhibits Raf and other kinases and its non-Raf kinase activities may be responsible for its efficacy. In addition, there are conflicting scientific reports regarding the reliance or necessity of CDK2 in the cell-cycle. Although several other companies have CDK and Aurora kinase programs, we are not aware of any candidates that have demonstrated therapeutic benefit in clinical testing. If CDK, Aurora or Raf kinase inhibition is not an effective treatment of human cancer, our drug candidates from these programs may have little or no commercial value.

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If our competitors develop and market products that are more effective, safer or less expensive than our future products, our commercial opportunities will be negatively impacted.

        The life sciences industry is highly competitive, and we face significant competition from many pharmaceutical, biopharmaceutical and biotechnology companies that are researching and marketing products designed to address cancer and inflammatory diseases. We are developing small molecule therapeutics that will compete with other drugs and therapies that currently exist or are being developed. Many of our competitors have significantly greater financial, manufacturing, marketing and drug development resources than we do. Large pharmaceutical companies in particular have extensive experience in clinical testing and in obtaining regulatory approvals for drugs. These companies also have significantly greater research capabilities than we do. In addition, many universities and private and public research institutes are active in cancer and inflammation research, some of which are in direct competition with us.

        Our product candidates will compete with a number of cytotoxic drugs that are currently marketed or in development that also target proliferating cells. These drugs include marketed products, such as irinotecan, doxorubicin and taxanes, which are generic and widely available, and many other cell-cycle inhibitors that have been shown to be effective anti-cancer agents. To compete effectively with these agents, our product candidates will need to demonstrate advantages that lead to improved clinical efficacy compared to these competitive products. We also compete with other companies that may be pursuing drug discovery using other technologies, including fragment-based technologies.

        We believe that our ability to successfully compete will depend on, among other things:


        If our competitors market products that are more effective, safer or less expensive than our future products, if any, or that reach the market sooner than our future products, if any, we may not achieve commercial success. In addition, the biopharmaceutical industry is characterized by rapid technological change. Because our research approach integrates many technologies, it may be difficult for us to stay abreast of the rapid changes in each technology. If we fail to stay at the forefront of technological change, we may be unable to compete effectively. Technological advances or products developed by our competitors may render our technologies or product candidates obsolete.

Our proprietary Tethering drug discovery approach is experimental and may not discover any therapeutic compounds of commercial value.

        We have developed a proprietary drug discovery approach called "Tethering." Tethering is a process whereby a target protein known to be involved in a disease process is engineered to facilitate the binding of small drug fragments. Once a small fragment is identified, the fragment is built out using the target protein's surface as a template to make a new full-size therapeutic compound. Tethering is unproven as a drug discovery approach. We have only recently begun preclinical studies of product candidates discovered through Tethering. Our Tethering drug discovery approach may not identify any therapeutic compounds of commercial value.

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If we fail to maintain our existing, or enter into new, strategic collaborations, we may have to reduce or delay our product candidate development or increase our expenditures.

        Our business model is based in part upon entering into strategic collaborations for discovery and/or development of some of our product candidates. In particular, we are substantially dependent on our strategic collaboration with Biogen Idec to discover, develop and commercialize small molecule inhibitors of Raf kinase and up to five additional targets. The agreement may be terminated by Biogen Idec without cause at any time before August 2006 upon six months' written notice or immediately upon written notice and payment of a termination fee. After August 2006, Biogen Idec may terminate the agreement without cause upon 90 days' written notice. If we are not able to maintain this collaboration with Biogen Idec or our other existing collaborations, or establish and maintain additional strategic collaborations of similar scope:

In that event, we would likely be required to limit the size or scope of one or more of our programs.

The commercial success of our collaborations depends in part on the development and marketing efforts of our collaboration partners, over which we have limited control. If our collaborations are unsuccessful, our potential to develop and commercialize products through our collaborations, and to generate future revenue from the sale of these products, would be significantly reduced.

        Our dependence on collaboration arrangements subjects our company to a number of risks. Our ability to develop and commercialize drugs that we develop with our collaboration partners depends on our collaboration partners' ability to establish the safety and efficacy of our product candidates, obtain and maintain regulatory approvals and achieve market acceptance of a product once commercialized. Our collaboration partners may elect to delay or terminate development of one or more product candidates, independently develop products that compete with ours, or fail to commit sufficient resources to the marketing and distribution of products developed through their collaborations with us. In the event that one or more of our collaboration partners fails to diligently develop or commercialize a product candidate covered by one of our collaboration agreements, we may have the right to terminate our partner's rights to such product candidate but we will not receive any future revenue from that product candidate unless we are able to find another partner or commercialize the product candidate on our own, which is likely to result in significant additional expense. Business combinations, significant changes in business strategy and/or financial difficulties may also adversely affect the willingness or ability of one or more of our collaboration partners to complete their obligations under our collaboration agreements. If our collaboration partners fail to perform in the manner we expect, our potential to develop and commercialize products through our collaborations, and to generate future revenue from the sale of these products, would be significantly reduced.

If conflicts of interest arise between our collaboration partners and us, any of them may act in their self-interest, which may be adverse to our interests.

        If a conflict of interest arises between us and one or more of our collaboration partners, they may act in their own self-interest and not in the interest of our company or our stockholders. Some of our

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collaboration partners are conducting, and any of our future collaboration partners may conduct, multiple product development efforts within the disease area that is the subject of collaboration with our company. For example, we are collaborating with Johnson & Johnson PRD to discover small molecule inhibitors of Cathepsin S. In addition to our collaboration, Johnson & Johnson PRD also has an independent effort focused on developing a small molecule Cathepsin S inhibitor. In some of our collaborations, we have agreed not to conduct, independently or with any third party, any research that is competitive with the research conducted under our collaborations. Our collaboration partners, however, may develop, either alone or with others, products in related fields that are competitive with the product candidates that are the subject of these collaborations. Competing products, either developed by our collaboration partners or to which our collaboration partners have rights, may result in their withdrawal of support for our product candidates. Business combinations, significant changes in business strategy and/or financial difficulties may also adversely affect the willingness or ability of one or more of our collaboration partners to complete their obligations under our collaboration agreements.

        If one or more of our collaboration partners were to breach or terminate their collaboration agreements with us or otherwise fail to perform their obligations thereunder in a timely manner, the preclinical or clinical development or commercialization of the affected product candidates or research programs could be delayed or terminated. We do not know whether our current or any future collaboration partners will pursue alternative technologies or develop alternative product candidates, either on their own or in collaboration with others, including our competitors, as a means for developing treatments for the diseases targeted by collaboration agreements with our company.

The results of preclinical studies and clinical trials may not satisfy the requirements of FDA or other regulatory agencies.

        Prior to receiving approval to commercialize any of our product candidates in the United States or abroad, we and our collaboration partners must demonstrate with substantial evidence from well-controlled clinical trials, and to the satisfaction of FDA and other regulatory authorities abroad, that such product candidates are safe and effective for their intended uses. Results from preclinical studies and clinical trials can be interpreted in different ways. Even if we and our collaboration partners believe the preclinical or clinical data for our product candidates are promising, such data may not be sufficient to support approval by FDA and other regulatory authorities. Administering any of our product candidates to humans may produce undesirable side effects, which could interrupt, delay or halt clinical trials of our product candidates and result in FDA or other regulatory authorities denying approval of our product candidates for any or all targeted indications.

We rely on third parties to conduct our clinical trials for SNS-595 and plan to rely on third parties to conduct our clinical trials for SNS-032. If these third parties do not successfully carry out their contractual duties or meet expected deadlines, we may be unable to obtain regulatory approval for or commercialize SNS-595, SNS-032 or any of our other product candidates.

        We currently do not have the ability to independently conduct clinical trials for SNS-595, SNS-032 or any other product candidate. We rely on third parties, such as contract research organizations, medical institutions, clinical investigators and contract laboratories, to conduct clinical trials of our product candidates for which we do not have a collaboration. If the third parties conducting our clinical trials do not perform their contractual duties or obligations, do not meet expected deadlines or need to be replaced, or if the quality or accuracy of the clinical data they obtain is compromised due to the failure to adhere to our clinical trial protocols or for any other reason, we may need to enter into new arrangements with alternative third parties and our clinical trials may be extended, delayed or terminated or may need to be repeated, and we may not be able to obtain regulatory approval for or commercialize the product candidate being tested in such trials.

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We rely on a third party to manufacture our product candidates, including SNS-595 and SNS-032, and depend on a single supplier for SNS-595. There is a limited number of manufacturers that are capable of manufacturing the active ingredient of SNS-595.

        We do not currently own or operate manufacturing facilities for clinical or commercial production of our product candidates. We have no experience in drug formulation or manufacturing, and we lack the resources and the capability to manufacture any of our product candidates on a clinical or commercial scale. As a result, we rely on a third party to manufacture the active pharmaceutical ingredient of SNS-595, which is classified as a toxic substance, thereby limiting the number of suppliers qualified to manufacture it. This manufacturer is our single supplier. If our third-party manufacturer is unable to produce the active pharmaceutical ingredient, we will need to establish a contract with another supplier. We believe there are at least three contract manufacturers in North America with the capability to manufacture the active ingredient of SNS-595. However, establishing a relationship with an alternative supplier would likely delay our ability to produce the active pharmaceutical ingredient for three to six months. We will also rely on a third party to manufacture SNS-032. We expect to continue to depend on third-party contract manufacturers for the foreseeable future.

        Our product candidates require precise, high quality manufacturing. A contract manufacturer is subject to ongoing periodic unannounced inspection by FDA and corresponding state agencies to ensure strict compliance with current Good Manufacturing Practice, or cGMP, and other applicable government regulations and corresponding foreign standards. Our contract manufacturer's failure to achieve and maintain high manufacturing standards in compliance with cGMP regulations could result in manufacturing errors resulting in patient injury or death, product recalls or withdrawals, delays or interruptions of production or failures in product testing or delivery, delay or prevention of filing or approval of marketing applications for our products, cost overruns or other problems that could seriously harm our business.

        To date, our product candidates have been manufactured in small quantities for preclinical studies and clinical trials. If in the future one of our product candidates is approved for commercial sale, we will need to manufacture that product in larger quantities. Significant scale-up of manufacturing may require additional validation studies, which FDA must review and approve. If we are unable to successfully increase the manufacturing capacity for a product candidate, the regulatory approval or commercial launch of any related products may be delayed or there may be a shortage in supply.

        Any performance failure on the part of a contract manufacturer could delay clinical development or regulatory approval of our product candidates or commercialization of our future products, depriving us of potential product revenue and resulting in additional losses. In addition, our dependence on a third party for manufacturing may adversely affect our future profit margins. Our ability to replace an existing manufacturer may be difficult because the number of potential manufacturers is limited and FDA must approve any replacement manufacturer before they can begin manufacturing our product candidates. Such approval would require new testing and compliance inspections. It may be difficult or impossible for us to identify and engage a replacement manufacturer on acceptable terms in a timely manner, or at all.

We currently have no sales and marketing staff or distribution organization. If we are unable to develop a sales and marketing and distribution capability on our own or through collaborations with marketing partners, we will not be successful in commercializing our future products.

        We currently have no sales, marketing or distribution capabilities. We intend to establish our own sales and marketing organization with technical expertise and supporting distribution capabilities to commercialize some future products, which will be expensive and time consuming. Any failure or delay in the development of our internal sales, marketing and distribution capabilities would adversely impact the commercialization of these products. With respect to other future products, we plan to collaborate with third parties that have direct sales forces and established distribution systems. To the extent that

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we enter into co-promotion or other licensing arrangements, our product revenue is likely to be lower than if we directly marketed or sold our products. In addition, any revenue we receive will depend upon the efforts of third parties, which may not be successful and are only partially within our control. If we are unable to enter into such arrangements on acceptable terms or at all, we may not be able to successfully commercialize these future products. If we are not successful in commercializing our future products, either on our own or through collaborations with one or more third-parties, our future product revenue will suffer and we may incur significant additional losses.

Our proprietary rights may not adequately protect our technologies and product candidates.

        Our commercial success will depend on our ability to obtain patents and maintain adequate protection for our technologies and product candidates in the United States and other countries. As of the date of this prospectus, we owned or had exclusive rights to 59 issued U.S. and foreign patents and 112 pending U.S. and foreign patent applications. We will be able to protect our proprietary rights from unauthorized use by third parties only to the extent that our proprietary technologies and future products are covered by valid and enforceable patents or are effectively maintained as trade secrets.

        We apply for patents covering both our technologies and product candidates, as we deem appropriate. However, we may fail to apply for patents on important technologies or product candidates in a timely fashion, or at all. Our existing patents and any future patents we obtain may not be sufficiently broad to prevent others from practicing our technologies or from developing competing products and technologies. In addition, we generally do not control the patent prosecution of subject matter that we license to and from others. Accordingly, we are unable to exercise the same degree of control over this intellectual property as we would over our own. Moreover, the patent positions of biopharmaceutical companies are highly uncertain and involve complex legal and factual questions for which important legal principles remain unresolved. As a result, the validity and enforceability of patents cannot be predicted with certainty. In addition, we do not know whether:

        We also rely on trade secrets to protect some of our technology, especially where we do not believe patent protection is appropriate or obtainable. However, trade secrets are difficult to maintain. While we use reasonable efforts to protect our trade secrets, our or our collaboration partners' employees, consultants, contractors or scientific and other advisors may unintentionally or willfully disclose our proprietary information to competitors. Enforcement of claims that a third party has illegally obtained and is using trade secrets is expensive, time consuming and uncertain. In addition, foreign courts are sometimes less willing than U.S. courts to protect trade secrets. If our competitors independently develop equivalent knowledge, methods and know-how, we would not be able to assert our trade secrets against them and our business could be harmed.

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The composition of matter patents covering SNS-595 are due to expire in 2015. Even if SNS-595 is approved by FDA, we may not be able to recover our development costs prior to the expiration of these patents.

        The composition of our lead product candidate, SNS-595, is covered by U.S. patent 5,817,669 and its counterpart patents and patent applications in 45 foreign jurisdictions. U.S. patent 5,817,669 is due to expire on October 6, 2015, and most of its foreign counterparts are due to expire on June 6, 2015. We do not know whether patent term extensions will be available in the future. SNS-595 must undergo extensive clinical trials before it can be approved by FDA. We do not know when, if ever, SNS-595 will be approved by FDA. Even if SNS-595 is approved by FDA in the future, we may not have sufficient time to commercialize SNS-595 to enable us to recover our development costs prior to the expiration of the U.S. and foreign patents covering SNS-595. Our obligation to pay royalties to Dainippon Pharmaceutical, the company from which we licensed SNS-595, may extend beyond the patent expiration, which will further erode the profitability of this product.

If we are sued for infringing intellectual property rights of third parties, litigation will be costly and time consuming and could prevent us from developing or commercializing our future products.

        Our commercial success depends on not infringing the patents and proprietary rights of other parties and not breaching any collaboration or other agreements we have entered into with regard to our technologies and product candidates. Numerous third-party U.S. and foreign issued patents and pending applications exist in the area of kinases, including CDK, Aurora and Raf kinases for which we have research programs. Because patent applications can take several years to issue, there may currently be pending applications, unknown to us, that may result in issued patents that cover our technologies or product candidates. If we wish to use the technology or compound claimed in issued and unexpired patents owned by others, we will need to obtain a license from the owner, enter into litigation to challenge the validity of the patents or incur the risk of litigation in the event that the owner asserts that we infringe its patents.

        If a third party asserts that we infringe its patents or other proprietary rights, we could face a number of issues that could seriously harm our competitive position, including:

We may be subject to damages resulting from claims that we or our employees have wrongfully used or disclosed alleged trade secrets of our employees' former employers.

        Many of our employees were previously employed at universities or biotechnology or pharmaceutical companies, including our competitors or potential competitors. We may be subject to claims that these employees or we have inadvertently or otherwise used or disclosed trade secrets or other proprietary information of their former employers. Litigation may be necessary to defend against these claims. If we fail in defending such claims, in addition to paying monetary damages, we may lose valuable intellectual property rights or personnel. A loss of key research personnel or their work product could hamper or prevent our ability to commercialize our product candidates, which could

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severely harm our business. Even if we are successful in defending against these claims, litigation could result in substantial costs and be a distraction to management.

We expect to significantly expand our clinical research and development and marketing capabilities, and any difficulties managing this growth could disrupt our operations.

        We expect to significantly expand our clinical research and development and marketing capabilities by increasing expenditures in these areas, hiring additional employees and expanding the scope of our current operations. Future growth will require us to continue to implement and improve our managerial, operational and financial systems, expand our facilities and continue to recruit and train additional qualified personnel, which may impose a strain on our administrative and operational infrastructure. The competition for qualified personnel in the biopharmaceutical field is intense. We are highly dependent on our continued ability to attract, retain and motivate highly-qualified management, clinical and scientific personnel. Due to our limited resources, we may not be able to effectively manage the expansion of our operations or recruit and train additional qualified personnel. If we are unable to manage our growth effectively, we may not be able to implement our business plan.

Risks Related to Our Industry

The regulatory approval process is expensive, time consuming and uncertain and may prevent us or our collaboration partners from obtaining approvals for the commercialization of some or all of our product candidates.

        The research, testing, manufacturing, selling and marketing of drug candidates are subject to extensive regulation by FDA and other regulatory authorities in the United States and other countries, which regulations differ from country to country. Neither we nor our collaboration partners are permitted to market our product candidates in the United States until we receive approval of a New Drug Application, or NDA, from FDA. Neither we nor our collaboration partners have received marketing approval for any of our product candidates. Obtaining approval of an NDA can be a lengthy, expensive and uncertain process. In addition, failure to comply with FDA and other applicable U.S. and foreign regulatory requirements may subject our company to administrative or judicially imposed sanctions, including warning letters, civil and criminal penalties, injunctions, product seizure or detention, product recalls, total or partial suspension of production, and refusal to approve pending NDAs or supplements to approved NDAs.

        Regulatory approval of an NDA or NDA supplement is not guaranteed, and the approval process is expensive and may take several years. FDA also has substantial discretion in the drug approval process. Despite the time and expense exerted, failure can occur at any stage, and we could encounter problems that cause us to abandon clinical trials or to repeat or perform additional preclinical studies and clinical trials. The number of preclinical studies and clinical trials that will be required for FDA approval varies depending on the drug candidate, the disease or condition that the drug candidate is designed to address, and the regulations applicable to any particular drug candidate. FDA can delay, limit or deny approval of a drug candidate for many reasons, including:

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Even if we receive regulatory approval for a product candidate, we will be subject to ongoing FDA obligations and continued regulatory review, which may result in significant additional expense and limit our ability to commercialize our future products.

        Any regulatory approvals that we or our collaboration partners receive for our product candidates may also be subject to limitations on the indicated uses for which the product may be marketed or contain requirements for potentially costly post-marketing follow-up studies. In addition, if FDA approves any of our product candidates, the labeling, packaging, adverse event reporting, storage, advertising, promotion and recordkeeping for the product will be subject to extensive and ongoing regulatory requirements. The subsequent discovery of previously unknown problems with the drug, including adverse events of unanticipated severity or frequency, may result in restrictions on the marketing of the drug, and could include withdrawal of the drug from the market.

        FDA's policies may change and additional government regulations may be enacted that could prevent or delay regulatory approval of our product candidates. We cannot predict the likelihood, nature or extent of government regulation that may arise from future legislation or administrative action, either in the United States or abroad. If we are not able to maintain regulatory compliance, we might not be permitted to market our future products and we may not achieve or sustain profitability.

Even if we receive regulatory approval to market our product candidates, the market may not be receptive to our products.

        Even if our product candidates obtain regulatory approval, resulting products, if any, may not gain market acceptance among physicians, patients, healthcare payors and/or the medical community. We believe that the degree of market acceptance will depend on a number of factors, including:

The potential toxicity of single and repeated doses of SNS-595 has been explored in a number of animal studies that suggest the mechanism-based dose-limiting toxicities in humans receiving SNS-595 may be similar to some of those observed in approved cytotoxic agents, including temporary toxicity to bone marrow cells, the gastrointestinal system and other systems with rapidly dividing cells. However, we do not know what side effects SNS-595 may have in humans as our clinical trials have only recently commenced.

        In previous clinical trials conducted by BMS, SNS-032 has been administered by IV infusion on a once a week and once every three weeks basis. We believe that SNS-032 will need to be administered on a more frequent basis to show efficacy. Our current Phase I clinical trial design for SNS-032 would administer SNS-032 by a three hour IV infusion once a day for five consecutive days, followed by 16 days without the drug. We believe that this IV regimen may be inconvenient for patients, and commercial success may depend on developing an effective oral formulation of SNS-032. The development of an oral formulation could be costly and result in delays for the advancement of the program and we cannot be certain that we will be able to develop an effective oral formulation for SNS-032.

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        If our future products fail to achieve market acceptance, we may not be able to generate significant revenue to achieve or sustain profitability.

The coverage and reimbursement status of newly approved drugs is uncertain, and failure to obtain adequate coverage and reimbursement could limit our ability to market any future products we may develop and decrease our ability to generate revenue.

        There is significant uncertainty related to the third-party coverage and reimbursement of newly approved drugs. The commercial success of our future products in both domestic and international markets depends on whether third-party coverage and reimbursement is available for the ordering of our future products by the medical profession for use by their patients. Medicare, Medicaid, health maintenance organizations and other third-party payors are increasingly attempting to manage healthcare costs by limiting both coverage and the level of reimbursement of new drugs and, as a result, they may not cover or provide adequate payment for our future products. These payors may not view our future products as cost-effective, and reimbursement may not be available to consumers or may not be sufficient to allow our future products to be marketed on a competitive basis. Likewise, legislative or regulatory efforts to control or reduce healthcare costs or reform government healthcare programs could result in lower prices or rejection of our future products. Changes in coverage and reimbursement policies or healthcare cost containment initiatives that limit or restrict reimbursement for our future products may reduce any future product revenue.

Failure to obtain regulatory approval in foreign jurisdictions will prevent us from marketing our products abroad.

        We intend to market our future products in international markets. In order to market our future products in the European Union and many other foreign jurisdictions, we must obtain separate regulatory approvals. We have had limited interactions with foreign regulatory authorities, and the approval procedures vary among countries and can involve additional testing, and the time required to obtain approval may differ from that required to obtain FDA approval. Approval by FDA does not ensure approval by regulatory authorities in other countries, and approval by one foreign regulatory authority does not ensure approval by regulatory authorities in other foreign countries or by FDA. The foreign regulatory approval process may include all of the risks associated with obtaining FDA approval. We may not obtain foreign regulatory approvals on a timely basis, if at all. We may not be able to file for regulatory approvals and may not receive necessary approvals to commercialize our products in any market.

Foreign governments often impose strict price controls, which may adversely affect our future profitability.

        We intend to seek approval to market our future products in both the United States and in foreign jurisdictions. If we obtain approval in one or more foreign jurisdictions, we will be subject to rules and regulations in those jurisdictions relating to our product. In some foreign countries, particularly in the European Union, prescription drug pricing is subject to governmental control. In these countries, pricing negotiations with governmental authorities can take considerable time after the receipt of marketing approval for a drug candidate. To obtain reimbursement or pricing approval in some countries, we may be required to conduct a clinical trial that compares the cost-effectiveness of our future product to other available therapies. If reimbursement of our future products is unavailable or limited in scope or amount, or if pricing is set at unsatisfactory levels, we may be unable to achieve or sustain profitability.

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We may be subject to costly claims related to our clinical trials and may not be able to obtain adequate insurance.

        Because we conduct clinical trials in humans, we face the risk that the use of our product candidates will result in adverse side effects. We cannot predict the possible harms or side effects that may result from our clinical trials. Although we have clinical trial liability insurance for up to $10.0 million, our insurance may be insufficient to cover any such events. We do not know whether we will be able to continue to obtain clinical trial coverage on acceptable terms, or at all. We may not have sufficient resources to pay for any liabilities resulting from a claim excluded from, or beyond the limit of, our insurance coverage. There is also a risk that third parties that we have agreed to indemnify could incur liability. Any litigation arising from our clinical trials, even if we were ultimately successful, would consume substantial amounts of our financial and managerial resources and may create adverse publicity.

We may incur significant costs complying with environmental laws and regulations, and failure to comply with these laws and regulations could expose us to significant liabilities.

        We use hazardous chemicals and radioactive and biological materials in our business and are subject to a variety of federal, state and local laws and regulations governing the use, generation, manufacture, storage, handling and disposal of these materials. Although we believe our safety procedures for handling and disposing of these materials and waste products comply with these laws and regulations, we cannot eliminate the risk of accidental injury or contamination from the use, storage, handling or disposal of hazardous materials. In the event of contamination or injury, we could be held liable for any resulting damages, and any liability could significantly exceed our insurance coverage, which is limited to $100,000 for pollution cleanup, and we are uninsured for third-party contamination injury.

Risks Related To This Offering

The price of our common stock may be volatile, and you may not be able to resell your shares at or above the initial public offering price.

        Prior to this offering, there has been no public market for our common stock. An active and liquid trading market for our common stock may not develop or be sustained after this offering. You may be unable to sell your shares of common stock at or above the initial public offering price due to fluctuations in the market price of our common stock resulting from changes in our operating performance or prospects. Factors that could cause volatility in the market price of our common stock include, but are not limited to:

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        In addition, the stock markets in general, and the markets for pharmaceutical, biopharmaceutical and biotechnology stocks in particular, have experienced extreme volatility that have been often unrelated to the operating performance of the issuer. These broad market fluctuations may adversely affect the trading price or liquidity of our common stock. In the past, when the market price of a stock has been volatile, holders of that stock have sometimes instituted securities class action litigation against the issuer. If any of our stockholders were to bring such a lawsuit against us, we could incur substantial costs defending the lawsuit and the attention of our management would be diverted from the operation of our business.

The ownership of our common stock will continue to be highly concentrated, and your interests may conflict with the interests of our existing stockholders.

        Our executive officers and directors and their affiliates, together with our current significant stockholders, will beneficially own approximately         % of our outstanding common stock upon completion of this offering, based on an assumed initial public offering price of $            per share. The relative ownership by this group of our common stock may increase as a result of the final price per share of our common stock in this offering, as described in "Conversion of Preferred Stock and Reverse Stock Split." Accordingly, these stockholders, acting as a group, will continue to have significant influence over the outcome of corporate actions requiring stockholder approval, including the election of directors, any merger, consolidation or sale of all or substantially all of our assets or any other significant corporate transaction. These stockholders could delay or prevent a change of control of our company, even if such a change of control would benefit our other stockholders. The significant concentration of stock ownership may adversely affect the trading price of our common stock due to investors' perception that conflicts of interest may exist or arise.

A significant portion of our outstanding common stock may be sold into the market in the near future. Substantial sales of this stock, or the perception such sales are likely to occur, could cause the price of our common stock to decline.

        If our existing stockholders sell a large number of shares of our common stock or the public market perceives that existing stockholders might sell shares of common stock, the market price of our common stock could decline significantly. All of the shares offered under this prospectus will be freely tradable without restriction or further registration under the federal securities laws, unless purchased by our "affiliates" as that term is defined in Rule 144 under the Securities Act of 1933. Of the remaining                         shares outstanding upon the closing of this offering,                        may be sold pursuant to Rule 144, 144(k) and 701 upon the expiration of 180-day lock-up agreements.

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        Existing stockholders holding an aggregate of 41,638,779 shares of common stock, including shares of common stock underlying warrants, have rights with respect to the registration of these shares of common stock with the Securities and Exchange Commission. If we register their shares of common stock following the expiration of the lock-up agreements, they can sell those shares in the public market.

        Promptly following this offering, we intend to register approximately 14,500,000 shares of common stock that are authorized for issuance under our stock option and employee stock purchase plans. As of December 31, 2004, 7,140,666 shares were subject to outstanding options, of which 3,010,773 shares are vested. Once we register these shares, they can be freely sold in the public market upon issuance, subject to the lock-up agreements referred to above and the restrictions imposed on our affiliates under Rule 144.

Investors in this offering will suffer immediate and substantial dilution of their investment

        If you purchase common stock in this offering, you will pay more for your shares than our pro forma as adjusted net tangible book value per share. You will incur immediate and substantial dilution of $                  per share, representing the difference between our assumed initial public offering price and our pro forma as adjusted net tangible book value per share. Based upon an assumed initial public offering price of $         per share, purchasers of common stock in this offering will have contributed approximately      % of the aggregate purchase price paid by all purchasers of our stock but will own only approximately      % of our common stock outstanding after this offering. In the past, we issued options and warrants to acquire common stock at prices significantly below the assumed initial public offering price. To the extent these outstanding options or warrants are exercised, you will incur further dilution.

Provisions of our charter documents or Delaware law could delay or prevent an acquisition of our company, even if the acquisition would be beneficial to our stockholders, and could make it more difficult for you to change management.

        Provisions of our amended and restated certificate of incorporation and amended and restated bylaws may discourage, delay or prevent a merger, acquisition or other change in control that stockholders may consider favorable, including transactions in which stockholders might otherwise receive a premium for their shares. In addition, these provisions may frustrate or prevent any attempt by our stockholders to replace or remove our current management by making it more difficult to replace or remove our board of directors. These provisions include:

        In addition, Delaware law prohibits a publicly held Delaware corporation from engaging in a business combination with an interested stockholder, generally a person who, together with its affiliates, owns or within the last three years has owned 15% of our voting stock, for a period of three years after the date of the transaction in which the person became an interested stockholder, unless the business combination is approved in a prescribed manner. Accordingly, Delaware law may discourage, delay or prevent a change in control of our company.

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        Provisions in our charter and other provisions of Delaware law could limit the price that investors are willing to pay in the future for shares of our common stock.

We have never paid dividends on our capital stock, and we do not anticipate paying any cash dividends in the foreseeable future.

        We have never declared or paid cash dividends on our capital stock. We do not anticipate paying any cash dividends on our capital stock in the foreseeable future. We currently intend to retain all available funds and any future earnings to fund the development and growth of our business. As a result, capital appreciation, if any, of our common stock will be your sole source of gain for the foreseeable future.

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SPECIAL NOTE REGARDING FORWARD-LOOKING STATEMENTS

        This prospectus, including particularly the sections entitled "Prospectus Summary," "Risk Factors," "Management's Discussion and Analysis of Financial Condition and Results of Operations" and "Business," contains forward-looking statements that involve substantial risks and uncertainties. All statements, other than statements of historical fact, included in this prospectus regarding our strategy, future operations, future financial position, future revenue, projected costs, prospects, plans and objectives of management are forward-looking statements. The words "anticipate," "believe," "estimate," "expect," "hope," "intend," "may," "plan," "project," "will," "would" and similar expressions are intended to identify forward-looking statements, although not all forward-looking statements contain these identifying words. We may not actually achieve the plans, intentions or expectations disclosed in our forward-looking statements and you should not place undue reliance on our forward-looking statements. Actual results or events could differ materially from the plans, intentions and expectations disclosed in the forward-looking statements we make. We have included important factors in the cautionary statements included in this prospectus, particularly in the "Risk Factors" section, that we believe could cause actual results or events to differ materially from the forward-looking statements that we make. Our forward-looking statements do not reflect the potential impact of any future acquisitions, mergers, dispositions, in-licensing transactions, joint ventures or investments we may make. We do not assume any obligation to update any forward-looking statements.

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USE OF PROCEEDS

        We estimate that the net proceeds from the sale of            shares of common stock in this offering will be approximately $             million, or approximately $         million if the underwriters exercise their option to purchase additional shares in full, based on an assumed initial public offering price of $        per share, after deducting underwriting discounts and commissions and estimated offering expenses.

        We currently expect to use the net proceeds from this offering as follows:

        In addition, we may use approximately $4.0 million to repay indebtedness owed to Biogen Idec as of April 12, 2005, with interest of a three percent premium to LIBOR. We intend to use the remainder of the net proceeds from this offering for general corporate purposes, including capital expenditures and working capital. We may also use a portion of our net proceeds to in-license product candidates or to invest in businesses or technologies that we believe are complementary to our own.

        We expect that the net proceeds from this offering, together with our current cash and cash equivalents, will be sufficient to advance our SNS-595 program to completion of Phase II clinical trials in small cell and non-small cell lung cancers and a Phase Ib clinical trial in certain leukemias, to complete a Phase I clinical trial for SNS-032, and to select a development candidate, file an investigational new drug application with FDA and complete Phase I clinical trials for our Aurora kinase inhibitors program.

        The amount and timing of our actual expenditures depend on several factors, including the progress of our research and development efforts and the amount of cash used by our operations. Accordingly, we will retain broad discretion in the allocation of the net proceeds from this offering. Pending such use, we intend to invest our net proceeds from this offering in short-term, investment-grade, interest-bearing instruments.


DIVIDEND POLICY

        We have never declared or paid cash dividends on our capital stock. We do not anticipate paying any cash dividends on our capital stock in the foreseeable future. We currently intend to retain all available funds and any future earnings to fund the development and growth of our business. Any future determination relating to our dividend policy will be made at the discretion of our board of directors and will depend on a number of factors, including revenue, capital requirements, financial condition, prospects and other factors that our board of directors may deem relevant.

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CAPITALIZATION

        The following table presents our capitalization as of December 31, 2004:

        You should read this capitalization table in conjunction with "Selected Financial Data" and "Management's Discussion and Analysis of Financial Condition and Results of Operations" and our audited financial statements and related notes included elsewhere in this prospectus.

 
  As of
December 31, 2004

 
  Actual
  Pro Forma
As Adjusted

 
  (in thousands, except
share and
per share data)

Current portion of long-term debt   $ 1,291   $  
Non-current portion of long-term debt     4,438      

Convertible preferred stock, $0.0001 par value; 38,582,000 shares authorized, 34,824,938 shares issued and outstanding, actual; no shares authorized, no shares issued and outstanding, pro forma as adjusted

 

 

108,813

 

 

 

Stockholders' equity (deficit):

 

 

 

 

 

 
Preferred stock, $0.0001 par value, no shares authorized, issued and outstanding, actual; 5,000,000 shares authorized, no shares issued and outstanding, as adjusted          
Common stock, $0.0001 par value; 110,000,000 shares authorized; 5,917,375 shares issued and outstanding, actual; 100,000,000 shares authorized,         shares issued and outstanding, pro forma as adjusted     1      
Additional paid-in capital     6,493      
Notes receivable from stockholders     (135 )    
Deferred stock compensation     (2,916 )    
Accumulated other comprehensive income     (70 )    
Accumulated deficit     (93,417 )    
   
 
  Total stockholders' equity (deficit)     (90,044 )    
   
 
    Total capitalization   $ 24,498   $  
   
 

        The information in the table excludes, as of December 31, 2004:

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DILUTION

        The historical net tangible book value of our common stock as of December 31, 2004 was a deficit of $90.0 million, or $(15.21) per share. Historical net tangible book value per share is determined by dividing the net tangible book value by the number of outstanding shares of common stock. If you invest in our common stock in this offering, your ownership interest will be immediately diluted to the extent of the difference between the initial public offering price per share and the pro forma as adjusted net tangible book value per share of our common stock.

        After giving effect, based on an assumed initial public offering price of $                        per share, to (i) the automatic conversion of our outstanding preferred stock into common stock in connection with this offering and (ii) receipt of the net proceeds from the sale of            shares of common stock in this offering, after deducting underwriting discounts and commissions and estimated offering expenses, our pro forma as adjusted net tangible book value as of December 31, 2004 would have been approximately $             million, or $            per share. See "Conversion of Preferred Stock and Reverse Stock Split." This represents an immediate increase in pro forma as adjusted net tangible book value of $            per share to existing stockholders and an immediate dilution of $            per share to new investors purchasing shares of common stock in this offering at an assumed initial offering price of $                  per share.

        The following table illustrates this dilution on a per share basis to new investors:

Assumed initial public offering price per share       $  
  Historical net tangible book value per share as of December 31, 2004          
  Increase per share attributable to reverse stock split          
  Increase per share attributable to conversion of preferred stock          
   
     
  Pro forma net tangible book value per share before the offering          
  Increase per share attributable to this offering          
   
     
Pro forma as adjusted net tangible book value per share after the offering          
       
Dilution per share to new investors       $  
       

        The table below summarizes as of December 31, 2004, on a pro forma as adjusted basis described above, the number of shares of our common stock, the total consideration and the average price per share (i) paid to us by existing stockholders and (ii) to be paid by new investors purchasing shares of our common stock in this offering. The table assumes an initial public offering price of $            per share before underwriting discounts and commissions and estimated offering expenses.

 
  Shares Purchased
  Total Consideration
   
 
  Average Price
Per Share

 
  Number
  Percent
  Amount
  Percent
Existing stockholders         % $       % $  
New investors                     $  
   
 
 
 
     
  Total         % $       %    
   
 
 
 
     

        The above discussion and tables are based on 40,742,313 shares of common stock issued and outstanding as of December 31, 2004 and exclude:

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        Assuming the exercise in full of all outstanding stock options and warrants, our pro forma as adjusted net tangible book value as of December 31, 2004 would be $             per share, representing an immediate increase in pro forma as adjusted net tangible book value of $            per share to existing stockholders and an immediate dilution of $            per share to new investors purchasing shares of common stock in this offering at an assumed initial public offering price of $        per share.

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SELECTED FINANCIAL DATA

        The following selected financial data should be read in conjunction with "Management's Discussion and Analysis of Financial Condition and Results of Operations" and our audited financial statements and related notes included elsewhere in this prospectus. We derived the statements of operations data for the years ended December 31, 2000 and 2001, as well as the balance sheet data as of December 31, 2000, 2001 and 2002, from our audited financial statements not included in this prospectus. We derived the statements of operations data for the years ended December 31, 2002, 2003 and 2004, as well the balance sheet data as of December 31, 2003 and 2004, from our audited financial statements included elsewhere in this prospectus. Our historical results are not necessarily indicative of results to be expected in any future period.

 
  Year Ended December 31,
 
 
  2000
  2001
  2002
  2003
  2004
 
 
 
(in thousands, except share and per share data)

 
Statements of Operations Data:                                
Revenue:                                
  Collaboration revenue   $   $ 407   $ 3,170   $ 6,842   $ 5,938  
  Collaboration revenue from related party             32     857     4,201  
  Grant and fellowship revenue     327     701     1,474     561     166  
   
 
 
 
 
 
    Total revenue     327     1,108     4,676     8,260     10,305  
   
 
 
 
 
 
Operating expenses:                                
  Research and development     9,208     14,790     18,441     21,326     23,616  
  General and administrative     2,825     5,273     6,179     6,136     7,352  
   
 
 
 
 
 
    Total operating expenses     12,033     20,063     24,620     27,462     30,968  
   
 
 
 
 
 
Loss from operations     (11,706 )   (18,955 )   (19,944 )   (19,202 )   (20,663 )
Interest income     2,817     3,525     1,360     713     518  
Interest expense     (269 )   (497 )   (594 )   (521 )   (387 )
Other income (expense), net     254     (104 )   (4 )   5     2  
   
 
 
 
 
 
Net loss   $ (8,904 ) $ (16,031 ) $ (19,182 ) $ (19,005 ) $ (20,530 )
   
 
 
 
 
 
Basic and diluted net loss per share   $ (5.13 ) $ (5.06 ) $ (4.41 ) $ (3.80 ) $ (3.71 )
   
 
 
 
 
 
Shares used in computing basic and diluted net loss per share     1,737,088     3,166,054     4,351,983     4,996,860     5,533,739  
   
 
 
 
 
 
Pro forma basic and diluted net loss per share (unaudited)                           $ (0.53 )
                           
 
Shares used in computing pro forma basic and diluted net loss per share (unaudited)                             38,637,365  
                           
 
 
  As of December 31,
 
 
  2000
  2001
  2002
  2003
  2004
 
 
 
(in thousands)

 
Balance Sheet Data:                                
Cash, cash equivalents and marketable securities   $ 53,668   $ 56,768   $ 47,155   $ 33,843   $ 36,812  
Working capital     52,706     53,220     42,219     27,208     27,707  
Total assets     76,559     64,896     54,346     40,306     43,026  
Long-term debt     1,870     3,727     2,593     3,249     4,438  
Convertible preferred stock     88,836     88,836     94,821     94,821     108,813  
Common stock and additional paid-in capital     2,435     2,546     2,637     2,723     6,494  
Accumulated deficit     (18,668 )   (34,699 )   (53,881 )   (72,886 )   (93,417 )
Total stockholders' equity (deficit)     (16,415 )   (32,115 )   (51,428 )   (70,376 )   (90,044 )

        See Note 2 to our audited financial statements for a description of the method used to compute shares used in computing basic and diluted net loss per common share and shares used in computing pro forma basic and diluted net loss per common share.

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MANAGEMENT'S DISCUSSION AND ANALYSIS
OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS

         The following discussion and analysis of our financial condition and results of operations should be read together with our audited financial statements and related notes included elsewhere in this prospectus. This discussion and analysis contains forward-looking statements that involve risks, uncertainties and assumptions. Our actual results may differ materially from those anticipated in these forward-looking statements as a result of many factors, including but not limited to those set forth under "Risk Factors" and elsewhere in this prospectus. All forward-looking statements included in this prospectus are based on information available to us on the date of this prospectus and we assume no obligation to update any forward-looking statements contained in this prospectus. See "Special Note Regarding Forward-Looking Statements."

Business Overview

        We are a clinical-stage biopharmaceutical company focused on the discovery, development and commercialization of novel small molecule therapeutics for oncology, inflammatory diseases and other unmet medical needs. We have developed a proprietary fragment-based drug discovery approach, called "Tethering," that we combine with other drug discovery tools, such as structure-based design and medicinal chemistry, to discover and develop novel therapeutics. We have built our product candidate portfolio through internal discovery and the in-licensing of novel cancer therapeutics. We are advancing our product candidates through in-house research and development efforts and strategic collaborations with leading pharmaceutical and biopharmaceutical companies.

        From our incorporation in 1998 through 2001, our operations consisted primarily of developing and refining our drug discovery technologies. Since 2002, we have focused on developing novel small molecule drugs mainly to treat cancer and inflammatory diseases.

        We are advancing three proprietary oncology product candidates, SNS-595, SNS-032 and an Aurora kinase inhibitor. We are currently conducting two Phase I clinical trials with SNS-595, our lead product candidate, and we expect to commence up to two Phase II clinical trials in various types of solid tumors and one Phase Ib clinical trial in certain leukemias in the second half of 2005. In addition, we expect to commence a Phase I clinical trial with our second most advanced product candidate, SNS-032, in the second half of 2005. This compound was in-licensed from BMS in April 2005. We expect to continue preclinical studies and select a development candidate for our other product candidate, an Aurora kinase inhibitor, in 2005 and to file an IND and commence Phase I clinical trials in 2006. We have worldwide development and commercialization rights to SNS-595, SNS-032 and our Aurora kinase inhibitors program. We may in the future enter into collaborations to maximize the commercial potential of these programs.

        We currently have five strategic collaborations with Biogen Idec, Johnson & Johnson PRD and Merck focused on the discovery and development of new product candidates. As of December 31, 2004, we had received an aggregate of approximately $55.0 million in the form of stock purchase proceeds, fees and loans from our collaboration partners.

        Since our inception, we have generated significant losses. As of December 31, 2004, we had an accumulated deficit of $93.4 million. We expect our net losses to increase primarily due to our anticipated clinical trial activities.

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Financial Operations Overview

        We have not generated any revenue from sales of commercial products and do not expect to generate any product revenue for the foreseeable future. To date, our revenue has consisted of collaboration revenue and grant and fellowship revenue.

        Collaboration Revenue.     We generate revenue primarily through our collaborations. We currently have five ongoing research-based collaborations. Each of these collaborations includes a technology access fee, research funding, milestone payments and royalties upon sales of future products that may result from the collaborations. The table below sets forth our revenue since January 1, 2002 from each of our collaborators.

 
  Year Ended December 31,
 
  2002
  2003
  2004
 
 
(in thousands)

Biogen Idec   $ 32   $ 857   $ 4,201
Chiesi Farmaceutici     2,003     841    
Johnson & Johnson PRD     1,167     2,350     1,334
Merck         3,651     4,604
   
 
 
  Total   $ 3,202   $ 7,699   $ 10,139
   
 
 

        In May 2002, we entered into our collaboration with Johnson & Johnson PRD. In December 2002, we entered into our initial collaboration with Biogen Idec. In February 2003, we entered into our initial collaboration with Merck. Our collaboration with Chiesi Farmaceutici was terminated on December 31, 2002, and we completed our remaining performance obligations in 2003. In July 2004, we entered into a second collaboration with Merck. In August 2004, we entered into a second collaboration with Biogen Idec.

        Over the next two years, we expect to receive additional research funding from our collaborators totaling at least $14.0 million. This funding is discretionary, but is not dependent upon the achievement of milestones. In addition, we may receive milestone payments if one or more of our research collaboration programs reach a milestone for which a payment is due.

        Grant and Fellowship Revenue.     Grant and fellowship revenue is recognized as we perform services under the applicable grant. As of December 31, 2004, we had been awarded $5.4 million, and had recognized as revenue $2.5 million, in federal grants under the Small Business Innovation Research, or SBIR, program. In addition, we have recognized revenue from other grants and fellowships. We do not plan to perform any additional work under our SBIR grants in the foreseeable future.

        Most of our operating expenses to date have been for research and development activities. Research and development expense represents costs incurred to discover and develop novel small molecule therapeutics, including Phase I clinical trial costs for SNS-595, to develop our proprietary fragment-based Tethering drug discovery approach, to develop in-house research and preclinical study capabilities, to discover and advance product candidates toward clinical trials and in connection with in-licensing activities. We expense all research and development costs as they are incurred. The table

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below sets forth our research and development expense since January 1, 2002 for our product candidate programs.

 
  Year Ended December 31,
   
 
  2002
  2003
  2004
  Total
 
 
(in thousands)

SNS-595   $   $ 420   $ 4,587   $ 5,007
Aurora kinase inhibitors         175     3,688     3,863
Raf kinase inhibitors     31     2,411     2,967     5,409
Other kinase inhibitors             879     879
Cathepsin S inhibitors     1,635     2,319     967     4,921
TNF family inhibitors     23     2,565     2,526     5,114
BACE inhibitors for Alzheimer's disease     2,749     3,072     2,266     8,087
Anti-viral inhibitors     165     98     32     295
Other     13,838     10,266     5,704     29,808
   
 
 
 
  Total   $ 18,441   $ 21,326   $ 23,616   $ 63,383
   
 
 
 

        We licensed SNS-032 from BMS in April 2005, and we did not incur any research and development expense for this program prior to that time.

        We incur research and development expense associated with both partnered and unpartnered research activities, as well as the development and expansion of our drug discovery technologies. Research and development expense relating to our collaborations with Biogen Idec, Merck and Johnson & Johnson PRD consist primarily of costs related to Tethering, lead optimization, preclinical studies and other activities related to the identification and optimization of compounds for development of kinase inhibitors for the treatment of cancer, cytokine and enzyme inhibitors for the treatment of inflammatory diseases, antiviral inhibitors for the treatment of viral disease as well as protease inhibitors for the treatment of Alzheimer's disease. Under our Biogen Idec agreement we have an option on a target by target basis to co-fund post-Phase I development costs for up to two oncology kinase targets, which may include Raf kinase. If we exercise one or both of our options, our research and development expenses will increase significantly. Research and development expense related to co-development activities that we elect to co-fund would consist primarily of manufacturing costs for the product candidate, clinical trial related costs, costs for consultants and contract research employee compensation and facilities costs and depreciation of equipment.

        We expect to incur research and development expense to conduct preclinical studies on our Aurora kinase inhibitors program and to conduct clinical trials on any Aurora kinase inhibitors which result from that program, as well as clinical trials on SNS-032 and SNS-595. Clinical trials are costly, and as we continue to advance our product candidates through preclinical and clinical development, we expect our research and development expenses to increase. For example, we expect to spend at least $31 million to advance our SNS-595 program to completion of Phase II clinical trials in small cell and non-small cell lung cancers and acute myelocytic leukemia, to advance our SNS-032 program to completion of our planned Phase I clinical trial, and to select a development candidate, file an investigational new drug application with FDA and complete Phase I clinical trials for our Aurora kinase inhibitors program. As of the date of this prospectus, due to the risks inherent in the clinical trial process and given the early state of development of our programs, we are unable to estimate the costs we will incur in the continued development of our product candidates for potential commercialization. Due to these same factors, we are unable to determine the anticipated completion dates for our current research and development programs. Clinical development timelines, probability of success and development costs vary widely. While we are currently focused on advancing SNS-595 through clinical development, we anticipate that we will make determinations as to which programs to

33



pursue and how much funding to direct to each program on an ongoing basis in response to the scientific and clinical success of each product candidate, as well as an ongoing assessment as to the product candidate's commercial potential. In addition, we cannot forecast which product candidates will be subject to future collaborative or licensing arrangements, when such arrangements will be secured, if at all, and to what degree such arrangements would affect our development plans and capital requirements. As a result, we do not know when and to what extent we will receive cash inflows from our product candidates. See "Business—Strategic Collaborations."

        Our general and administrative expense consists primarily of salaries and other related costs for personnel in finance, human resources, facilities management, legal, including intellectual property management, and general administration and non-cash stock compensation. Other significant costs include facilities costs and fees paid to outside legal advisors and auditors.

Critical Accounting Policies and Significant Judgments and Estimates

        This discussion and analysis of our financial condition and results of operations is based on our financial statements, which have been prepared in accordance with U.S. generally accepted accounting principles. The preparation of these financial statements requires management to make estimates and judgments that affect the reported amounts of assets, liabilities and expenses and the disclosure of contingent assets and liabilities at the date of the financial statements, as well as revenue and expenses during the reporting periods. We evaluate our estimates and judgments on an ongoing basis. We base our estimates on historical experience and on various other factors we believe are reasonable under the circumstances, the results of which form the basis for making judgments about the carrying value of assets and liabilities that are not readily apparent from other sources. Actual results could therefore differ materially from those estimates under different assumptions or conditions.

        Our significant accounting policies are more fully described in Note 1 to our audited financial statements included elsewhere in this prospectus. We believe the following critical accounting policies reflect our more significant estimates and assumptions used in the preparation of our financial statements.

        In accordance with Emerging Issues Task Force, or EITF, 00-21, Accounting for Revenue Arrangements with Multiple Deliverables , which we adopted effective July 1, 2003, revenue arrangements with multiple deliverable items are divided into separate units of accounting based on whether certain criteria are met, including whether the delivered item has stand-alone value to the customer and whether there is objective and reliable evidence of the fair value of the undelivered items. We allocate the consideration we receive among the separate units of accounting based on their respective fair value, and we apply the applicable revenue recognition criteria to each of the separate units. Where an item in a revenue arrangement with multiple deliverables does not constitute a separate unit of accounting and for which delivery has not occurred, we defer revenue until the delivery of the item is completed.

        We record upfront, non-refundable license fees and other fees received in connection with research and development collaborations as deferred revenue and recognize these amounts ratably over the relevant period specified in the agreements, generally the research term.

        We recognize research funding related to collaborative research with our collaboration partners as the related research services are performed. This funding is normally based on a specified amount per full-time equivalent employee per year.

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        We recognize revenue from milestone payments, which are substantially at risk at the time the collaboration agreement is entered into, upon completion of the applicable milestone events. We intend to recognize any future royalty revenue based on reported product sales by third-party licensees.

        We recognize grant revenue from government agencies and private research foundations as the related qualified research and development costs are incurred, up to the limit of the prior approval funding amounts.

        We record accruals for estimated clinical trial costs, comprising payments for work performed by contract research organizations and participating clinical trial sites. These costs may be a significant component of future research and development expenses. We accrue costs for clinical trials performed by contract research organizations based on estimates of work performed under the contracts. Costs of setting up clinical trial sites for participation in trials are expensed immediately. Costs related to patient enrollment are accrued as patients are entered in the trial reduced by an initial payment made to the hospital when the first patient is enrolled. These cost estimates may or may not match the actual costs incurred for services performed by the organizations as determined by patient enrollment levels and related activities. If we have incomplete or inaccurate information, we may underestimate costs associated with various trials at a given point in time. Although our experience in estimating these costs is limited, the difference between accrued expenses based on our estimates and actual expenses have not been material to date.

        We account for employee stock options using the intrinsic-value method in accordance with Accounting Principles Board, or APB, Opinion No. 25, Accounting for Stock Issued to Employees , and Financial Accounting Standards Board Interpretation, or FIN, No. 44, Accounting for Certain Transactions Involving Stock Compensation, an Interpretation of APB No. 25 , and have adopted the disclosure-only provisions of SFAS No. 123, Accounting for Stock-Based Compensation .

        In December 2002, the Financial Accounting Standards Board, or FASB, issued Statement of Financial Accounting Standards, or SFAS, No. 148, Accounting for Stock-Based Compensation—Transition and Disclosure . SFAS No. 148 amends SFAS No. 123 to provide alternative methods of transition for a voluntary change to the fair value based method of accounting for stock-based employee compensation. In addition, SFAS No. 148 amends the disclosure provisions of SFAS No. 123 and APB Opinion No. 28, Interim Financial Reporting , to require disclosure in the summary of significant accounting policies of the effects of an entity's accounting policy with respect to employee stock compensation on reported net loss. We have elected to continue to follow the intrinsic-value method of accounting as prescribed by APB Opinion No. 25.

        The information regarding net loss as required by SFAS No. 123, presented in Note 1 to our audited financial statements, has been determined as if we had accounted for our employee stock options under the fair value method of SFAS No. 123. The resulting effect on net loss to date pursuant to SFAS No. 123 is not likely to be representative of the effects on net loss pursuant to SFAS No. 123 in future years, since future years are likely to include additional grants and the irregular impact of future years' vesting.

        We account for stock compensation arrangements to non-employees in accordance with SFAS No. 123, as amended by SFAS No. 148, and EITF No. 96-18, Accounting for Equity Instruments That Are Issued to Other than Employees for Acquiring, or in Conjunction with Selling, Goods or Services , using a fair value approach. The compensation costs of these arrangements are subject to remeasurement over the vesting terms as earned.

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        Stock compensation expense, which is a non-cash charge, results from stock option grants at exercise prices that, for financial reporting purposes, are deemed to be below the estimated fair value of the underlying common stock on the date of grant. Given the absence of an active market for our common stock, our board of directors determined the estimated fair value of our common stock on the date of grant based on several factors, including progress and milestones achieved in our business and sales of preferred stock. In connection with the preparation of our financial statements necessary for our initial public offering, we have reassessed the estimated fair value of our common stock. Stock compensation expense per share equals the difference between the reassessed fair value per share of our common stock on the date of grant and the exercise price per share, and is amortized on a straight line basis over the vesting period of the underlying option, generally four years. From inception through December 31, 2004, we recorded deferred stock compensation of $3.3 million which is amortized over the vesting period of the options. At December 31, 2004, we had a total of $2.9 million remaining to be amortized.

        The total unamortized deferred stock compensation recorded for all option grants through December 31, 2004 is expected to be amortized as follows: $834,923 in each of 2005, 2006 and 2007 and $410,904 in 2008.

Results of Operations

        Revenue.     Revenue increased from $8.3 million in 2003 to $10.3 million in 2004. Collaboration revenue increased from $7.7 million in 2003 to $10.1 million in 2004, primarily due to a $3.3 million increase in collaboration revenue from Biogen Idec and a $953,000 increase in collaboration revenue from Merck, partially offset by a $1.0 million decrease in collaboration revenue from Johnson & Johnson PRD and an $841,000 decrease in collaboration revenue from Chiesi Farmaceutici. The increase in collaboration revenue from Biogen Idec and Merck resulted from new collaborations in 2004. The decrease in collaboration revenue from Johnson & Johnson PRD resulted from a decrease in personnel working on the collaboration. Our collaboration with Chiesi Farmaceutici terminated on December 31, 2002, and we completed our remaining performance obligations in 2003. Grant and fellowship revenue decreased from $561,000 in 2003 to $166,000 in 2004, primarily due to our decision in 2003 to only perform limited additional work under SBIR grants for the foreseeable future. We expect our 2005 revenue to increase as a result of our August 2004 collaboration with Biogen Idec.

        Research and development expense.     Research and development expense increased from $21.3 million in 2003 to $23.6 million in 2004, primarily due to $4.2 million increase in expenses related to the initiation of clinical trials of SNS-595 and a $4.9 million increase in expenses associated with our kinase programs, partially offset by a $1.4 million reduction in expenses related to our Cathepsin S inhibitors program, an $806,000 reduction in expenses related to our BACE inhibitors program and a $4.6 million reduction in expenses related to other programs. We expect to incur significant research and development expenses over the next several years, only a portion of which we expect to be funded by our collaboration partners. If SNS-595 progresses through the clinic and we bring additional product candidates, such as SNS-032, into clinical trials, our spending will further increase. In addition, under our August 2002 collaboration with Biogen Idec, we have an option to fund the co-development of up to two product candidates that may result from this collaboration. Our decision to exercise this option would materially increase our research and development expenses.

        Research and development expense associated with SNS-595 were $420,000 in 2003 and $4.6 million in 2004. Research and development expense associated with our Aurora kinase inhibitors program were $175,000 in 2003 and $3.7 million in 2004. In the future, we may seek development partners to help offset the cost of clinical and preclinical development and commercialization of these and other product candidates.

36



        Research and development expense for all other programs decreased from $20.7 million in 2003 to $15.3 million in 2004. The expense associated with these programs is partially offset by research fees and milestone payments associated therewith.

        General and administrative expense.     General and administrative expense increased from $6.1 million in 2003 to $7.4 million in 2004, primarily due to a $1.0 million increase in salary and related expenses resulting from the expansion of our executive team and a $216,000 increase in legal expenses primarily resulting from increased collaboration activities. As a public company, we will operate in an increasingly demanding regulatory environment that requires us to comply with the Sarbanes-Oxley Act of 2002 and the related rules and regulations of the Securities and Exchange Commission, or SEC, the Nasdaq National Market, expanded disclosures, accelerated reporting requirements and more complex accounting rules. We expect that our general and administrative expenses will continue to increase in subsequent periods due to these requirements and to increasing personnel and infrastructure expenses as we advance our product candidates.

        Interest income and expense.     Interest income decreased from $713,000 in 2003 to $518,000 in 2004, primarily due to lower interest rates and lower average balances of cash, cash equivalents and marketable securities. Interest expense decreased from $521,000 in 2003 to $387,000 in 2004, primarily due to a lower average interest rate on outstanding debt obligations.

        Revenue.     Revenue increased from $4.7 million in 2002 to $8.3 million in 2003. Collaboration revenue increased from $3.2 million in 2002 to $7.7 million in 2003. The increase in collaboration revenue in 2003 compared to 2002 was primarily due to our May 2002 collaboration with Johnson & Johnson PRD, our December 2002 collaboration with Biogen Idec and our February 2003 collaboration with Merck. Grant and fellowship revenue decreased from $1.5 million in 2002 to $561,000 in 2003. The decrease in grant and fellowship revenue in 2003 compared to 2002 was primarily due to our decision in 2003 to only perform limited additional work under SBIR grants for the foreseeable future.

        Research and development expense.     Research and development expense increased from $18.4 million in 2002 to $21.3 million in 2003, primarily due to an increase in personnel expenses of $1.2 million, a $1.1 million increase in office related expenses and a $575,000 increase in allocated facility expenses of increased research activity in connection with our collaborations. Research and development expense in 2003 includes a one-time licensing fee to Dainippon Pharmaceutical to acquire exclusive worldwide development and marketing rights for SNS-595.

        General and administrative expense.     General and administrative expense decreased from $6.2 million in 2002 to $6.1 million in 2003. The decrease in 2003 compared to 2002 was primarily due to a $200,000 decrease in facilities-related expense offset by a $83,000 increase in office related expenses.

        Interest income and expense.     Interest income decreased from $1.4 million in 2002 to $713,000 in 2003, primarily due to lower interest rates and lower average balances of cash, cash equivalents and marketable securities. Interest expense decreased from $594,000 in 2002 to $521,000 in 2003. The decrease in interest expense in 2003 compared to 2002 was primarily due to a decrease in our average cost of borrowing, partially offset by a $222,000 increase in borrowings.

Income Taxes

        Since inception, we have incurred operating losses and, accordingly, have not recorded a provision for income taxes for any of the periods presented. As of December 31, 2004, we had net operating loss carryforwards for federal and state income tax purposes of $76.3 million and $36.9 million, respectively. We also had federal research and development tax credit carryforwards of $1.1 million. If not utilized,

37



the federal net operating loss and tax credit carryforwards will expire beginning in 2018. Utilization of net operating loss and credit carryforwards may be subject to a substantial annual limitation due to limitations provided by the Internal Revenue Code of 1986, as amended, that are applicable if we experience an "ownership change" that may occur, for example, as a result of this offering aggregated with certain other sales of our stock before or after this offering. If not utilized, the state net operating loss carryforward will expire beginning in 2008. The annual limitation may result in the expiration of our net operating loss and tax credit carryforwards before they can be used.

Liquidity and Capital Resources

    Sources of Liquidity

        As of December 31, 2004, we had cash, cash equivalents and marketable securities of $36.8 million and outstanding equipment financing and debt obligations of $5.7 million. Since our inception, we have funded our operations primarily through the issuance of preferred stock, research funding and technology access fees from our collaboration partners, research grants, loans from Biogen Idec and other debt financings. Through December 31, 2004, we had received net proceeds of $108.8 million from the issuance of preferred stock, including $20.0 million from Biogen Idec, and common stock and $2.5 million in SBIR grants.

    Cash Flow

        Net cash used in operating activities decreased from $13.9 million in 2002 to $11.9 million in 2003 and $10.4 million in 2004. Net cash used in operating activities for these periods consisted primarily of our net loss, partially offset by depreciation and amortization and deferred revenue.

        Net cash provided by investing activities decreased from $14.7 million in 2002 to $5.7 million in 2003. Net cash used in investing activities was $7.1 million in 2004. Our investing activities for these periods consisted primarily of the investment of the proceeds of our sales of preferred stock.

        Net cash provided by financing activities decreased from $5.6 million in 2002 to $288,000 in 2003 and increased to $14.6 million in 2004. Our financing activities for these periods consisted primarily of the issuance of preferred stock and indebtedness incurred under our collaboration with Biogen Idec.

    Credit Arrangements

        In June 2000, we entered into an equipment financing agreement with General Electric Capital Corporation, which has been amended from time to time. The credit facility is available through May 2005. The equipment loans are secured by the equipment financed. As of December 31, 2004, we had outstanding $2.5 million to finance equipment purchases and leasehold improvements and $1.1 million remained available under the facility. Outstanding borrowings bear interest at annual rates ranging from 7.4% to 12.5%, and are payable over 36 to 48 months. In connection with this agreement, we issued in May 2003 a warrant to purchase 3,000 shares of Series C preferred stock at $4.80 per share and in June 2004, a warrant to purchase 1,435 shares of Series C preferred stock at $4.80 per share. The warrants expire in June 2013 and June 2014, respectively.

        In December 2002, we executed a promissory note in favor of Biogen Idec for an aggregate principal amount of up to $4.0 million. Under the promissory note, we have a drawdown period of ten calendar quarters beginning on April 1, 2003 and ending on June 30, 2005. The principal and accrued interest of each draw are due five years from the date of advance of each draw and bear interest at three percent above LIBOR to be paid quarterly. As of December 31, 2004, we had drawn $3.2 million and $800,000 remained available for future draws. We may use a portion of the proceeds of this offering to repay all of our outstanding indebtedness to Biogen Idec.

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    Operating Capital and Capital Expenditure Requirements

        We expect to continue to incur substantial operating losses in the future. We will not receive any product revenue until a product candidate has been approved by FDA or similar regulatory agencies in other countries and successfully commercialized. We currently anticipate that our cash, cash equivalents and marketable securities, together with the proceeds from this offering and revenue generated from our collaborations, will be sufficient to fund our operations at least through March 31, 2006. However, we will need to raise substantial additional funds to continue our operations and bring future products to market. We cannot be certain that any of our programs will be successful or that we will be able to raise sufficient funds to complete the development and commercialize any of our product candidates currently in development, should they succeed. Additionally, we plan to continue to evaluate in-licensing and acquisition opportunities to gain access to new drugs or drug targets that would fit with our strategy. Any such transaction would likely increase our funding needs in the future.

        Our future funding requirements will depend on many factors, including but not limited to:

    the rate of progress and cost of our clinical trials, preclinical studies and other discovery and research and development activities;

    the costs associated with establishing manufacturing and commercialization capabilities;

    the costs of acquiring or investing in businesses, product candidates and technologies;

    the costs of filing, prosecuting, defending and enforcing any patent claims and other intellectual property rights;

    the costs and timing of seeking and obtaining FDA and other regulatory approvals;

    the effect of competing technological and market developments; and

    the economic and other terms and timing of any collaboration, licensing or other arrangements into which we may enter.

        Until we can generate a sufficient amount of product revenue to finance our cash requirements, which we may never do, we expect to finance future cash needs primarily through public or private equity offerings, debt financings or strategic collaborations. We do not know whether additional funding will be available on acceptable terms, or at all. If we are not able to secure additional funding when needed, we may have to delay, reduce the scope of or eliminate one or more of our clinical trials or research and development programs. In addition, we may have to partner one or more of our product candidate programs at an earlier stage of development, which would lower the economic value of those programs to our company.

    Contractual Obligations

        The following table discloses aggregate information about our contractual obligations and the periods in which payments are due as of December 31, 2004 (in thousands):

 
  Payment due by period
Contractual Obligations

  Total
  Less than
1 year

  1-3 years
  3-5 years
  More than
5 years

Equipment financing   $ 2,529   $ 1,291   $ 1,113   $ 125   $
Indebtedness under collaboration agreement     3,200             3,200    
Operating lease obligations     25,104     2,638     5,516     5,852     11,098
   
 
 
 
 
  Total   $ 30,833   $ 3,929   $ 6,629   $ 9,177   $ 11,098
   
 
 
 
 

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        The contractual summary above reflects only payment obligations that are fixed and determinable. We also have contractual payments obligations, the timing of which are contingent on future events. Our operating lease obligations relate to the lease for our headquarters in South San Francisco, California.

        We also have agreements with clinical sites, and contract research organizations for the conduct of our clinical trials. We make payments to these sites and organizations based upon the number of patients enrolled and the period of follow-up in the trials.

Recent Accounting Pronouncements

        On December 16, 2004, FASB issued FASB Statement No. 123 (revised 2004), Share-Based Payment , which is a revision of FASB Statement No. 123, Accounting for Stock-Based Compensation. Statement 123(R) supersedes APB Opinion No. 25, Accounting for Stock Issued to Employees , and amends FASB Statement No. 95, Statement of Cash Flows. Generally, the approach in Statement 123(R) is similar to the approach described in Statement 123. However, Statement 123(R) requires all share-based payments to employees, including grants of employee stock options, to be recognized in the income statement based on their fair values. Pro forma disclosure is no longer an alternative. We expect to adopt Statement 123(R) on January 1, 2006.

        As permitted by Statement 123, we currently account for share-based payments to employees using Opinion 25's intrinsic value method. Accordingly, the adoption of Statement 123(R)'s fair value method will have a material impact on the results of operations, although it will have no impact on our overall financial position. The impact of adoption of Statement 123(R) cannot be predicted at this time, because it will depend on levels of share-based payments granted in the future.

Related Party Transactions

        For a description of our related party transactions, see "Certain Relationships and Related Party Transactions."

Off-Balance Sheet Arrangements

        We do not have any off-balance sheet arrangements, including structured finance, special purpose or variable interest entities.

Qualitative and Quantitative Disclosures About Market Risk

        The primary objective of our investment activities is to preserve our capital for the purpose of funding operations while at the same time maximizing the income we receive from our investments without significantly increasing risk. To achieve these objectives, our investment policy allows us to maintain a portfolio of cash equivalents and short-term investments in a variety of securities, including commercial paper, money market funds and corporate debt securities. Our cash and cash equivalents as of December 31, 2004 included liquid money market accounts. Our marketable securities as of December 31, 2004 included readily marketable debt securities. Due to the short-term nature of these instruments, a 1% movement in market interest rates would not have a significant impact on the total value of our portfolio as of December 31, 2004.

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CONVERSION OF PREFERRED STOCK AND REVERSE STOCK SPLIT

        Due to the antidilution provisions of our certificate of incorporation, the conversion ratios of our Series B, C, C-1 and C-2 preferred stock may be adjusted in connection with the conversion of our outstanding preferred stock into common stock. We will effect a reverse stock split to ensure that we have 20,000,000 shares of common stock outstanding immediately prior to this offering, after giving effect to such antidilution adjustments, if any, as described below and assuming the exercise of all outstanding options and warrants.

        In connection with this offering, all of our outstanding preferred stock will be converted into common stock. If the valuation of our company is greater than or equal to $234.0 million, each share of Series B, C, C-1 and C-2 preferred stock will convert into one share of common stock in connection with this offering. If our valuation is less than $234.0 million, the conversion ratios of our Series C, C-1 and C-2 preferred stock will be increased. If our valuation is less than $158.0 million, the conversion ratio of our Series B preferred stock will also be increased. Therefore, based on the valuation of our company in connection with this offering, the holders of the Series B, C, C-1 and C-2 preferred stock may hold a greater percentage of the 20,000,000 shares, options and warrants to be outstanding prior to the issuance of the shares offered by this prospectus. For purposes of the foregoing, our valuation will be the product of our initial public offering price multiplied by the sum of (i) the number of outstanding shares of common stock on an as-converted basis and (ii) the number of outstanding stock options and warrants. We will not know the conversion ratios of our Series B, C, C-1 and C-2 preferred stock until immediately prior to the effectiveness of our registration statement, of which this prospectus forms a part.

        In this prospectus, we have estimated the conversion ratios of our preferred stock and the ratio of the reverse stock split using an assumed initial public offering price of $            per share. We will not know the precise ratio of the reverse stock split until the initial public offering price is established.

        Upon completion of this offering, our existing stockholders will continue to have significant influence over the outcome of corporate actions requiring stockholder approval, including the election of directors, any merger, consolidation or sale of all or substantially all of our assets or any other significant corporate transaction. Changes in our valuation in connection with this offering will result in changes in the conversion ratios of our preferred stock and the reverse stock split ratio as described above. As a result, changes in our valuation in connection with this offering will impact the relative ownership of our common stock among our existing stockholders upon completion of this offering. The following table shows the beneficial ownership of our common stock upon completion of this offering at different assumed initial public offering prices by each person, or group of affiliated persons, known

41



by us to beneficially own more than 5% of our voting securities, all of our executive officers and directors as a group and all of our existing stockholders as a group.

 
  $
  $
  $
  $
  $
  $
  $
 
Abingworth BioVentures II SICAV     %   %   %   %   %   %   %
Biogen Idec                              
Entities affiliated with Credit Suisse First Boston                              
Entities affiliated with Mayfield Associates                              
Entities affiliated with Venrock Associates                              
Entities affiliated with Warburg Pincus                              
All executive officers and directors as a group (11 persons)                              
All other existing stockholders as a group                              

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BUSINESS

Overview

        We are a clinical-stage biopharmaceutical company focused on the discovery, development and commercialization of novel small molecule therapeutics for oncology, inflammatory diseases and other unmet medical needs. We have built our product candidate portfolio through internal discovery and the in-licensing of novel cancer therapeutics. We are advancing our product candidates through in-house research and development efforts and strategic collaborations with leading pharmaceutical and biopharmaceutical companies. We believe the quality and breadth of our product candidate pipeline, platform technology, strategic collaborations and scientific team will enable us to become a fully integrated biopharmaceutical company with a diversified portfolio of novel therapeutics for major diseases.

        We are advancing three proprietary oncology product candidates, SNS-595, SNS-032 and an Aurora kinase inhibitor. All three are novel inhibitors of the cell division process, known as cell-cycle inhibitors, intended for the treatment of cancer. We are currently conducting two Phase I clinical trials with our lead product candidate, SNS-595, and we expect to commence up to two Phase II clinical trials in various types of solid tumors and one Phase Ib clinical trial in certain leukemias in the second half of 2005. In addition, in 2006 we intend to commence Phase II clinical trials to evaluate SNS-595 as a stand-alone therapy and Phase Ib clinical trials to evaluate SNS-595 in combination with standard treatments in additional tumor types. In preclinical studies, SNS-595 has demonstrated broad anti-tumor activity. We plan to commence a Phase I clinical trial with our second most advanced product candidate, SNS-032, in the second half of 2005. This compound was in-licensed from BMS in April 2005. In addition, we expect to continue preclinical studies and to select a development candidate for our other product candidate, an Aurora kinase inhibitor, in 2005 and to file an IND and commence Phase I clinical trials in 2006. We believe that small molecule Aurora kinase inhibitors have the potential to limit the growth of multiple tumor types without causing significant peripheral neuropathy. We have worldwide development and commercialization rights to SNS-595, SNS-032 and our Aurora kinase inhibitors program. We may in the future enter into collaborations to maximize the commercial potential of these programs.

        We currently have five strategic collaborations with three leading pharmaceutical and biopharmaceutical companies from which, as of December 31, 2004, we had received an aggregate of approximately $55 million in the form of stock purchase proceeds, fees and loans. We have two separate collaborations with Biogen Idec in oncology and in inflammatory diseases. The oncology program with Biogen Idec is focused on developing multiple kinase inhibitors, including our Raf kinase inhibitor, for which we have an option to co-develop and co-promote on a worldwide basis. We also work with Biogen Idec on the development of small molecule inhibitors of TNF. We are collaborating with Johnson & Johnson PRD on the development of product candidates for the treatment of inflammatory diseases from our Cathepsin S inhibitors program. We have two separate collaborations with Merck to develop therapeutics for Alzheimer's disease and for viral diseases. In the last year, each of our current collaboration partners has either extended its existing collaboration or entered into a new collaboration with our company. We believe that our strategic collaborations will enable us to leverage and expand our internal development capabilities, manage our cash expenditures and diversify risk across our pipeline.

        We have developed a proprietary method of discovering drugs in pieces, or fragments. We call this fragment-based discovery approach "Tethering." We combine Tethering with other drug discovery tools, such as structure-based design and medicinal chemistry, to discover and develop novel therapeutics for major diseases. Tethering allows us to screen drug fragments based on binding properties rather than function, which we believe enables us to identify compounds that may not be discovered through conventional methods of drug discovery. We believe that this capability allows us to efficiently design

43



product candidates that bind to sites or regions on a specific protein not readily accessed by other discovery methods. Tethering is applicable to most proteins, and we have used Tethering on over 15 different protein targets to date.

Strategy

        We are focused on discovering, developing and commercializing small molecule therapeutics for oncology, inflammatory diseases and other unmet medical needs. The key elements of our strategy are as follows:

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Product Candidate Pipeline

        As of April 29, 2005, we have the following programs in various stages of research and development:

Program

  Status
  Planned Activities
  Commercial Rights
Oncology Programs            
 
SNS-595

 

Two Phase I clinical trials ongoing

 

Commencement of up to two Phase II and one Phase Ib in leukemias single-agent clinical trials planned in the second half of 2005 in multiple tumor types; Commencement of Phase II single-agent and Phase Ib combination clinical trials in additional tumor types planned for 2006

 

Sunesis
 
SNS-032

 

Planning additional Phase I clinical trial

 

Commencement of an additional Phase I clinical trial in the second half of 2005

 

Sunesis
 
Aurora kinase inhibitors

 

Preclinical

 

Continuation of preclinical studies and selection of a development candidate planned for 2005; File IND and commence Phase I clinical trials in 2006

 

Sunesis
 
Raf kinase inhibitors

 

Preclinical

 

Continuation of preclinical studies and selection of a development candidate planned for 2006; File IND and commence Phase I clinical trials in 2007

 

Biogen Idec/Sunesis
 
Other kinase inhibitors

 

Discovery

 

 

 

Biogen Idec/Sunesis

Inflammatory Disease Programs

 

 

 

 

 

 
 
Cathepsin S inhibitors

 

Discovery

 

 

 

Johnson & Johnson PRD
 
TNF family inhibitors

 

Discovery

 

 

 

Biogen Idec

Other Programs

 

 

 

 

 

 
 
BACE inhibitors for Alzheimer's disease

 

Discovery

 

 

 

Merck
 
Anti-viral inhibitors

 

Discovery

 

 

 

Merck

Overview of Cancer Market and Therapeutics

        Cancer is the second leading cause of death in the United States, with 570,000 deaths and 1.4 million new cases estimated in 2005, according to the American Cancer Society. Cancers can be divided broadly into two groups: solid tumor cancers that affect organs in the body, such as the lungs and colon; and hematological, or blood-borne, cancers, such as leukemia. The American Cancer Society estimates that solid tumor cancers accounted for approximately 509,000 cancer-related deaths in 2004 and will account for approximately 1.3 million, or 92%, of new cases diagnosed in 2005.

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        Cancer is characterized by uncontrolled cell growth. Cell growth and function are controlled by proteins that communicate and relay signals within cells. In normal cell proliferation, when a cellular signaling pathway is activated, or "on," it sends a signal telling the cell to grow and divide. When a component of a signaling pathway is mutated, the signal may not turn "off" or it may be constantly "on," causing the cell to continuously reproduce itself, resulting in a tumor.

        The goals of cancer therapy are to cure the patient and, in the absence of cure, to improve the quality of life and extend the life expectancy of the patient. The most common form of pharmaceutical treatment for cancer is cytotoxic therapeutics, which are designed to target and kill rapidly proliferating cells. This process is referred to as cell-cycle arrest, which leads to cell death. Cytotoxic drugs include irinotecan, doxorubicin, taxanes and other inhibitors of cellular proliferation. In addition, therapies designed to hit a specific molecular target, such as Gleevec and Tarceva, may be used in combination with or as alternatives to cytotoxic therapies.

        Due to the genetic diversity among tumors, a combination of drug therapies is generally used to treat any given tumor type, and many patients progress rapidly through all available therapies. Despite the introduction of a number of new therapeutics over the last few years, there is significant demand for new drugs that, by themselves or in combination with existing therapies, can significantly improve the quality of life and extend the life expectancy of cancer patients.

        Although cytotoxic therapies are widely used, their mechanism of action targets all proliferating cell populations, not just cancer cells, and therefore may result in significant side effects, including immune system compromise known as myelosuppression, nausea, vomiting, diarrhea, sores in the mouth and the digestive tract known as mucositis, hair loss, peripheral nerve cell death known as peripheral neuropathy and damage to the heart known as cardiotoxicity. Cytotoxic drugs may have a narrow "therapeutic window" between efficacy and toxicity, which means there is only a small variance between a therapeutic dose and a toxic dose. Proper dosing is a challenge with drugs that have a narrow therapeutic window because dosing below the therapeutic window results in the patient receiving a sub-therapeutic exposure to the drug, whereas dosing above the therapeutic window results in exposing the patient to a toxic level of the drug. Dosing can be particularly challenging with cytotoxic drugs because a number of these have demonstrated highly variable PK. PK variability results in differences in drug exposure among patients and, in some cases, in the same patient even at the same dose. As a result, it is difficult for physicians to determine the proper therapeutic dose for a patient at any particular time, and patients are frequently under-dosed or over-dosed.

        Notwithstanding their limitations, it is widely believed that cytotoxic therapeutics will continue to be a mainstay of cancer therapy. We believe significant commercial opportunities exist for cytotoxic drugs that act by a novel mechanism with a more manageable side effect profile, both as single-agent therapies in patients with resistant, or refractory, disease or in combination with current established therapies. We believe that our SNS-595 program is well positioned to take advantage of these opportunities.

        We also believe there is a need for novel molecularly-targeted therapies that can be used in combination with, or as alternatives to, cytotoxic therapies to improve the outcome of cancer treatment. Molecularly-targeted therapies may have fewer unwanted side effects because they are less likely to affect cell activity unrelated to cancer. We believe that these targeted therapeutics, such as Gleevec, Tarceva and Velcade, are likely to capture an increasing share of the cancer market and even contribute to its growth. For example, Novartis reported 2004 sales of Gleevec at $1.6 billion, a 45% increase from 2003. While these targeted therapeutics have demonstrated clinical benefit in some patients, there remains a significant unmet medical need in cancer patients with other tumor types or resistant tumors. We believe that SNS-032 and our Aurora and Raf kinase inhibitors, which also target specific molecules, are well positioned to benefit from these trends in cancer therapy.

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SNS-595 Program

        SNS-595 is a novel cytotoxic drug that we believe represents a new class of anti-tumor drugs. SNS-595 is in a chemical class known as naphthyridine analogues. Although naphthyridine analogues have been used as antibiotics and have been demonstrated to be safe in human treatment, no members of this chemical class have been approved for the treatment of cancer. SNS-595 is a broadly active cell-cycle inhibitor that we believe works in a different way than any other cancer therapy, known as a novel mechanism of action, and induces the arrest of proliferating cancer cells immediately before the cell divides into two new cells, leading to cell death. We obtained worldwide development and commercialization rights to SNS-595 from Dainippon through a license agreement in 2003.

        We believe SNS-595 has the following characteristics:

        In June 2004, we began the first of two Phase I clinical trials evaluating SNS-595 in groups of patients with advanced solid tumors. In these clinical trials, we are exploring doses and schedules of administration in preparation for Phase II clinical trials designed to evaluate initial clinical efficacy. As of March 31, 2005, we had administered 101 cycles of treatment to a total of 35 patients in our Phase I clinical trials. As of the date of this prospectus, we have observed stable disease lasting at least six cycles in four patients and one minor response in an ovarian cancer patient. Based on our Phase I clinical trials to date, dose limiting toxicity appears to be myelosuppression in the absence of any other dose limiting toxicities. We are conducting these clinical trials at three leading medical centers and expect to treat 30 to 40 patients in each trial.

        The first Phase I clinical trial of SNS-595 is a single-dose administration followed by a 21-day observation period constituting one cycle. Patients participating in this trial may receive up to six cycles of treatment. We plan to complete this trial in the first half of 2005.

        The second Phase I clinical trial, which began in October 2004, is evaluating the administration of three weekly doses of SNS-595 followed by a 14-day observation period in each 28-day cycle. Patients participating in this trial may receive up to six cycles of treatment. We plan to complete this trial by the end of the third quarter of 2005.

        Patients from both Phase I clinical trials whose disease stabilizes while on treatment or who exhibit a partial or complete response after six cycles of treatment may participate in a continuation trial following the completion of the initial trial.

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        SNS-595 has been the subject of numerous preclinical studies conducted by us and Dainippon. In 2000, Dainippon reported data from studies of SNS-595 in various mouse models. In these models, SNS-595 demonstrated superior therapeutic activity compared to several widely used cytotoxic drugs. Specifically, SNS-595 showed 98.9% to 99.3% inhibition of the growth of established tumors in three different solid tumor mouse models when compared to control animals. Statistical analysis showed that the chance that these differences in tumor size following treatment with SNS-595 were not due to the effect of the drug was less than 5%, known as a probability, or p-value, of less than 0.05. In some cases, complete tumor regressions were observed. In these models, a number of marketed cytotoxic drugs, including paclitaxel and irinotecan, had significantly less activity than SNS-595. In other mouse models involving the study of human tumors in mice with compromised immune systems, SNS-595 has shown broad activity in all models tested and inhibited the growth of established tumors by more than 80% in 14 of 17 tumor lines evaluated, including several drug-resistant tumor lines. This data is statistically significant with p-values of less than 0.05. While we do not know whether SNS-595 will demonstrate comparable activity in humans, we believe that these data are encouraging and support further development.

        SNS-595 has also demonstrated excellent PK properties in animals and humans to date. SNS-595 demonstrated, in all species tested, precise and reproducible PK results and low inter-individual PK variability. We believe this is because levels of SNS-595 in the blood are less affected by the metabolic processes than many other cytotoxic drugs. As a result, we expect to see similar drug exposures across all patients treated with SNS-595, a consistent adverse event profile and fewer unexpected toxicities.

        The potential toxicity of single and repeated doses of SNS-595 has been explored in a number of animal studies that suggest the mechanism-based dose-limiting toxicities in humans receiving SNS-595 may be similar to some of those observed in approved cytotoxic agents, including temporary toxicity to bone marrow cells, the gastrointestinal system and other systems with rapidly dividing cells. These toxicities are usually reversible and can be adequately managed by experienced medical oncology practitioners.

        We plan to commence up to two Phase II clinical trials in various types of solid tumors and one Phase Ib clinical trial in certain leukemias in the second half of 2005. We currently plan to design these trials to evaluate SNS-595 as a stand-alone therapy in patients with small cell and non-small cell lung cancers and acute myelocytic leukemia. In addition, in 2006 we intend to commence Phase II clinical trials to evaluate SNS-595 as a stand-alone therapy and Phase Ib clinical trials to evaluate SNS-595 in combination with standard treatments in additional tumor types. We may modify the tumor types selected for these Phase II and Phase Ib clinical trials based on the anti-tumor activity observed in animal models, tumor types showing responses in our Phase I clinical trials and strategic regulatory and market considerations.

SNS-032 Program

        SNS-032 is a novel targeted inhibitor of certain cyclin-dependent kinases including CDK2, CDK7 and CDK9. Kinases are proteins found in cells that are critical in the communication and relay of signals to promote cell growth or function. Alterations in several proteins that control CDK2 have been shown to be associated with poor prognosis and survival in several cancer types, including breast, ovarian and lung cancers. We believe that prolonged or repeated exposure to SNS-032 will inhibit CDK2, as well as CDK7 and CDK9, and that this inhibition can be a beneficial cancer treatment. We also believe that SNS-032 may be beneficial in addition to or in combination with other cytotoxic chemotherapeutic agents that act by other mechanisms in the cell cycle. We obtained worldwide rights

48



to develop and commercialize SNS-032 for diagnostic and therapeutic applications from BMS under a license agreement executed in April 2005.

        We believe that SNS-032 has the following characteristics:

        BMS has conducted three Phase I dose-escalation clinical trials evaluating the safety and tolerability of SNS-032 at three different dosing regimens in approximately 125 patients with refractory solid tumors. The first Phase I clinical trial was initiated in August 2001 and evaluated the administration of a one-hour IV infusion every three weeks. The second Phase I clinical trial was initiated in March 2002 and evaluated the administration of a 24-hour IV infusion every three weeks. The third Phase I clinical trial was initiated in July 2002 and evaluated the administration of a one-hour IV infusion every week, with the third dose given orally to measure the availability of the drug in the body when given orally, known as oral bioavailability. We believe that BMS did not complete the second and third clinical trials.

        In these clinical trials, SNS-032 was generally well tolerated and demonstrated toxicity consistent with a cytotoxic anticancer agent. Observed toxicities included QTc prolongation, decreased white blood cell count and liver toxicity. While no objective tumor responses were observed, a number of patients experienced stable disease and minor responses. We believe that patient exposure to the drug may have been suboptimal or inadequate to obtain tumor responses and that more frequent or more dose-intensive regimens will improve the likelihood of achieving responses with SNS-032 as a stand-alone agent.

        In previous preclinical studies conducted by BMS, SNS-032 was shown to be a broadly active inhibitor of the proliferation of tumor cell lines. We believe that the observed cell death caused by this inhibitor is the result of cell cycle arrest. In addition, SNS-032 demonstrated broad anti-tumor activity in multiple mouse and human tumor models, including breast, ovarian, colorectal and skin cell cancers. SNS-032 has also shown synergistic activity in preclinical models when combined with currently approved anti-tumor drugs, including Gemcitabine and Cisplatin.

        BMS also conducted a series of PK and metabolism studies with SNS-032. SNS-032 demonstrated predictable drug exposure between species and was shown to be orally bioavailable in mice, rats, dogs and humans. SNS-032 was found to be a weak inhibitor of human drug metabolizing enzymes,

49



suggesting that the potential for negative side effects resulting from drug-drug interactions when combined with other therapeutics could possibly be low.

        The toxicology of SNS-032 is consistent with the toxicology of other cytotoxic drugs. The dose-limiting toxicities in pre-clinical studies were myelosuppression and gastro-intestinal toxicity.

        We plan to commence a new Phase I clinical trial in the second half of 2005. We currently plan to design this study to evaluate the safety and tolerability of frequent, repeated exposure to SNS-032 in patients with refractory solid tumors, such as lung, breast and ovarian tumors, and in chronic lymphocytic leukemia. Patients would receive an escalating dose of SNS-032 as an IV infusion to assess the safety and tolerability of a dose and schedule that we would plan to use in subsequent Phase II clinical trials in a variety of tumors.

        Concurrently, we intend to develop an oral formulation of SNS-032, which may prove to be more convenient for patients, and to discover additional CDK inhibitors as alternative drug candidates.

Other Oncology Kinase Programs

        We are applying Tethering in several programs to discover and develop other novel kinase inhibitors for the treatment of cancer. Kinases are proteins found in cells that are critical in the communication and relay of signals to promote cell growth or function. In normal cell proliferation, when a cellular signaling pathway is activated, or "on," it sends a signal telling the cell to grow and divide. When a component of a signaling pathway involving a kinase is mutated, the signal may not turn "off" and thus may be constantly "on," causing the cell to continuously reproduce itself. This unregulated growth is a principal characteristic of cancer cells. It is widely believed that the signaling pathway plays an integral role in the growth of some tumor types. We believe that by inhibiting a kinase in a specific overactive pathway, the pathway can be turned "off," restoring normal signaling.

        There is significant pharmaceutical industry interest in kinases as key points of intervention for treating disease. Many strategies are used in the pharmaceutical industry to discover kinase inhibitors for drug development, including high-throughput functional screening of kinase-regulated pathways.

        There are 518 known human kinases, many of which are known to be involved in cancer and other diseases. Most small molecule kinase inhibitors bind to a main site common among many kinases, thereby affecting multiple kinases rather than only those involved in the targeted disease. As a result, it has been difficult to discover small molecule kinase inhibitors that bind only to the kinase involved in the targeted disease process and not to other kinases. The ability to target a single kinase is referred to as specificity. Binding without specificity may lead to unwanted toxicity problems.

        A small but growing number of compounds, including Gleevec, inhibit the targeted kinase with greater specificity by binding not only the main site but also a nearby region called the variable binding region. Each kinase has a different variable binding region. As a result, we believe inhibitors that also bind to the variable binding region will bind with greater specificity to the kinase of interest, and we use Tethering to identify these kinase inhibitors. We believe that these specific inhibitors may be associated with reduced toxicity.

        Our Aurora kinase inhibitors program is our most advanced kinase inhibitors program. We believe that Aurora kinase inhibitors represent an area of interest in the pharmaceutical industry and within the cancer treatment community.

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        Aurora kinases are key enzymes involved in cell growth and division and play an essential role in the abnormal growth and proliferation of tumor cells. Aurora kinases are known to be overexpressed in a number of tumor types, including colon cancer, breast cancer and leukemia. Aurora kinase inhibition retards cell proliferation and limits tumor growth by initiating programmed cell death. Because Aurora kinase is more highly expressed in active cells rather than resting cells, we believe that Aurora kinase therapies may selectively target cancer cells, which are actively dividing, over cells in a normal or resting state, which may lead to reduced toxicities.

        The goal of this program is to develop novel Aurora kinase inhibitors that exhibit broad activity in tumors with superior drug-like properties that do not cause significant peripheral neuropathy. We are conducting preclinical studies, including animal studies. One compound in our lead series was dosed on a once-a-week schedule for three weeks in colon and pancreatic solid tumor mouse models. In these models, our compound caused 80% or greater inhibition of tumor growth in ways consistent with inhibition of Aurora A and B with minimal observed toxicity. These results were statistically significant, with a p-value of less than 0.05. We believe these results are comparable to those observed in the same tumor models for VX-680, an Aurora inhibitor in development by Vertex Pharmaceuticals and Merck. We are currently using the data from these preclinical experiments to optimize the activity and PK properties of our Aurora kinase inhibitors. We anticipate selecting a development candidate in 2005 with the goal of filing an IND and commencing Phase I clinical trials in 2006. We have worldwide rights to commercialize any drugs resulting from our Aurora kinase inhibitors program.

        We are developing our Raf kinase inhibitors program in collaboration with Biogen Idec. We believe that Raf kinase inhibitors represent an area of interest in the pharmaceutical industry and within the cancer treatment community.

        Raf kinase is an enzyme in the Ras pathway, a signaling pathway important to cell proliferation. The Ras pathway is believed to be abnormally activated in many human cancers by various mechanisms. In approximately 15% of human cancers, a Ras gene is activated by mutation. We believe that several inhibitors of kinases in the Ras pathway have shown evidence of clinical activity in clinical trials.

        The goal of this program is to develop Raf kinase inhibitors with improved pharmaceutical properties as compared to other Raf kinase inhibitors in development. We applied Tethering to discover highly specific and potent Raf kinase inhibitors. We and Biogen Idec are conducting preclinical studies and anticipate selecting a development candidate in 2006. We expect Biogen Idec to file an IND and commence Phase I clinical trials in 2007. We have an option to co-develop and co-promote any drugs developed through this program on a worldwide basis.

        As part of our collaboration with Biogen Idec, we are applying Tethering to discover novel small molecule leads that inhibit up to five additional oncology kinase targets. We and Biogen Idec are working together on the identification, optimization and development of inhibitor drugs for these kinases. We are also working on the identification and optimization of kinase inhibitor drugs outside of our collaboration with Biogen Idec.

Inflammatory Diseases Programs

        Cathepsin S is an enzyme involved in the activation of T-cells. Inappropriate activation of T-cells may lead to some inflammatory diseases, such as asthma, rheumatoid arthritis, multiple sclerosis,

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psoriasis and Crohn's disease. In collaboration with Johnson & Johnson PRD, we are applying Tethering to discover small molecule inhibitors of Cathepsin S. We intend to develop these inhibitors into drugs for the treatment of major inflammatory diseases. We believe that small molecule Cathepsin S inhibitors would have the advantages of a novel mechanism of action, ease of oral administration and ease of manufacturing. Johnson & Johnson PRD holds worldwide rights to commercialize any drugs resulting from this program.

        TNF and related cytokine family members are proteins involved in inflammatory diseases, including rheumatoid arthritis, psoriasis and Crohn's disease. While inhibition of TNF has been validated as a treatment for inflammatory diseases, all of the currently marketed TNF inhibitors are injectable biologics. We believe that small molecule inhibitors would have advantages, such as ease of oral administration and ease of manufacturing, but discovery of small molecule TNF inhibitors has been historically challenging. In collaboration with Biogen Idec, we are applying Tethering to discover small molecule TNF family inhibitors. Examples of TNF inhibitors include Enbrel and Humira, which had reported sales of approximately $1.3 billion and $600 million, respectively, for the nine month period ended September 30, 2004. Biogen Idec holds worldwide rights to commercialize any drugs resulting from this program.

Other Programs

        In collaboration with Merck, we are applying Tethering to identify and optimize inhibitors of BACE, an important enzyme target in Alzheimer's disease. BACE, or beta-secretase, is involved in the formation of A-beta peptide, which is the predominant substance in the plaques found in the brains of Alzheimer's patients and believed to contribute to their disease. Merck holds worldwide rights to commercialize any drugs resulting from this collaboration and is responsible for advancing these compounds into lead optimization, preclinical studies and clinical trials.

        We are collaborating with Merck to identify small molecule inhibitors of an anti-viral target by a novel mechanism. We are providing Merck with a series of small molecule compounds that we derived from Tethering that target a specific viral protein. Merck holds worldwide rights to commercialize any drugs resulting from this collaboration and is responsible for advancing these compounds into lead optimization, preclinical studies and clinical trials.

Rationale For Fragment-Based Drug Discovery

        We have developed a proprietary fragment-based drug discovery approach, called Tethering, that we use in combination with other drug discovery tools, such as structure-based design and medicinal chemistry, to discover and develop novel therapeutics for major diseases.

        Pharmaceutical discovery often begins with the hypothesis that a target protein in the body is involved in a certain disease and that compounds that block or inhibit the action of that target will provide therapeutic benefit. The search for these compounds typically starts by screening a collection of molecules to find "hits" that inhibit the target function. These hits are then improved through medicinal chemistry to create more advanced molecules that are tested in animal models of the disease to determine whether they provide therapeutic benefit. Molecules that test positively in animal models are optimized to have the necessary properties to become drugs and are ultimately tested in human clinical trials.

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        Combinatorial chemistry has expanded the size of compound collections, and advances in automated high-throughput screening, or HTS, have enabled the screening of million-compound libraries. Despite these advances, HTS is limited by the number of complex, fully formed compounds that can practically be made and stored in a collection. Even very large collections represent only a small fraction of the compounds that could be made. Thus, new approaches to searching the vast potential diversity of chemical compounds are highly desired. Another challenge with HTS is that it typically identifies compounds that bind to the main binding site of kinases. It can be difficult to find molecules that bind to the variable binding region of kinases using HTS. We believe that kinase inhibitors that bind to the variable binding region have significant potential therapeutic benefit.

        We believe fragment-based drug discovery offers an alternative strategy for identifying drug-like compounds that bind to proteins. In contrast with HTS where compounds are identified by measuring activity, fragment-based discovery involves the identification of multiple drug fragments by measuring binding. Individual fragments that bind to nearby sites on the protein are identified and combined to form a drug-like compound. By first determining which fragments interact with the protein in the area of interest and then combining them, we believe there is a higher likelihood of identifying novel compounds that will bind to the target. A key challenge of fragment-based drug discovery is how to identify which fragments bind to the protein. Fragments typically bind weakly and can be difficult to detect using conventional methods.

        Tethering is our proprietary fragment-based drug discovery approach that we believe overcomes the limitations of existing conventional and fragment-based discovery methods. Tethering enables us to identify weak-binding fragments that would otherwise be difficult to detect. In Tethering, we first expose a target protein having a sulfur-containing amino acid named cysteine to a collection of specially designed fragments that also contain sulfur. Those fragments capable of binding to the target near the cysteine form a reversible chemical link known as a disulfide bond that stabilizes the binding of the fragment to the target protein. The formation of the disulfide bond results in an increase in the weight of the protein that allows us to identify the fragment using mass spectrometry. Although the disulfide bond helps to stabilize the weakly binding fragment to the protein, fragments that do not naturally bind to the protein are not detected.

        We create drug-like compounds by combining multiple fragments through a process called "Tethering with extenders." Once we have identified an initial fragment that binds to the target protein, we use this initial fragment as the basis for an extender to search for a companion fragment by the same process used to discover the initial fragment. Subsequently, the initial and companion fragments are combined into a single molecule and the attachment to the protein is removed. This ultimately generates a soluble drug-like compound that can be optimized through medicinal chemistry. In Tethering with extenders, the surface of the target protein is used as a mold to construct its own inhibitor. This approach can be applied to most protein targets.

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GRAPHIC

1
A pool of fragments is screened against a protein target.

2
A fragment binds to the protein target.

3
Following a second screening, a new fragment binds to the protein target and the initial fragment, forming a drug-like compound.

4
The drug-like compound is released from the protein target for further optimization.

        By screening and identifying individual fragments that bind to the target and only combining the fragments that bind, we are able to significantly expand the number of drug-like compounds that can be evaluated.

        Our Tethering approach has formed the basis of all of our collaborations to date. Our collaboration partners have been attracted to our company and our Tethering approach because of its potential to identify novel drug-like compounds that are difficult to detect through other means. We have successfully applied Tethering to over 15 different protein targets, including various kinases, to produce drug-like compounds. We optimize the drug-like compound to produce drug candidates by integrating Tethering with medicinal chemistry and structure-based drug design and by introducing pharmacology, including absorption, distribution, metabolism and excretion tests, early in the drug discovery process.

Strategic Collaborations

        We currently have five strategic collaborations with three leading pharmaceutical and biopharmaceutical companies. Each collaboration is target specific and involves personnel from both our company and our collaboration partner working together. These alliances are designed to enable us to leverage and expand our internal development capabilities, manage our cash expenditures and diversify risk across our pipeline. Through our strategic collaborations, we are able to pursue more programs than we could fund on our own. As of December 31, 2004, we had received an aggregate of approximately $55 million in the form of stock purchase proceeds, fees and loans from our collaboration partners. We believe that approximately 175 scientists currently work on our programs and programs partnered with our company. Approximately one-half of these scientists are our employees and of those, approximately 50% are funded through our collaborations.

        In forming each of our strategic collaborations, we have agreed not to conduct certain research, independently or with any commercial third party, that is on the same target as that covered by the collaboration agreement. Some of our collaborations also significantly restrict our ability to utilize intellectual property derived from a collaboration for a purpose outside of the collaboration.

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        In December 2002, we entered into a collaboration with Biogen Idec to apply Tethering to discover and develop small molecule modulators of up to four members of the TNF trimeric cytokine super-family plus up to two additional un-named targets. The primary focus of the program is to discover small molecule inhibitors of TNF, an important cytokine involved in the regulation of the human immune system for which only protein drugs, such as Enbrel, are available. During the research term of the agreement, we and Biogen Idec agreed to work together exclusively to identify and develop small molecule pharmaceutical compounds that inhibit a member of the TNF family as well as other collaboration targets, with the exception that either party may collaborate with a third party on a Phase II clinical trial or later stage compound against a collaboration target. Our exclusivity obligation continues for an additional year after the end of the research term. Biogen Idec holds worldwide rights to commercialize any drugs resulting from this program.

        Pursuant to this agreement we received a $3.0 million upfront technology access fee. In addition, Biogen Idec made a $6.0 million equity investment in our company. The agreement also provides for a maintenance fee payable to us of $357,500 per quarter, starting in April 2004 and continuing until the end of the initial research term, and a $4.0 million credit facility from which we may make 10 quarterly draws of $400,000 each, of which as of December 31, 2004 we had drawn an aggregate of $3.2 million. Both parties agreed to dedicate resources as provided in the research plan. To date, we have received payments totaling $7.6 million under this collaboration, including $3.2 million in loan proceeds. The initial research term is for 30 months, after which Biogen Idec has the option to extend the research term for one year upon payment of a technology maintenance fee and a commitment to provide research funding.

        We granted Biogen Idec a worldwide non-exclusive license to our intellectual property relating to Tethering with respect to specific collaboration targets and an exclusive license to our portion of the collaboration intellectual property for the commercialization of a small molecule product arising from the collaboration. Biogen Idec is required to pay up to $60.5 million in pre-commercialization milestones per compound, assuming the compound is approved for multiple indications, as well as royalty payments based on product sales. Royalty rates payable to us may be reduced if Biogen Idec is required to license additional intellectual property related to Tethering from one or more third parties in order to commercialize a collaboration product. Rights to collaboration products revert to us with a reverse royalty to Biogen Idec if Biogen Idec fails to use commercially reasonable and diligent efforts during development and commercialization of such products. Royalty obligations under the agreement continue on a country-by-country and product-by-product basis until the later of the date on which no valid patent claim relating to a product exists or 10 years from the date of first sale of the product.

        Our agreement with Biogen Idec will continue for so long as a product arising from the collaboration is the subject of an active development project or for so long as there is an obligation to pay royalties under the agreement. The agreement may be terminated earlier by Biogen Idec without cause upon 30 days' written notice, in which case each party will have exclusive rights to the compounds it solely invented during the collaboration and non-exclusive rights to jointly invented compounds, Biogen Idec will remain obligated to pay milestones and royalties to us, and we will owe a modest royalty to Biogen Idec. The agreement may also be terminated by either party for uncured breach or bankruptcy of the other party. If Biogen Idec terminates the agreement in connection with our breach or bankruptcy, it retains its licenses from us but receives a reduction in its milestones and royalty obligations. If we terminate the agreement for Biogen Idec's breach or bankruptcy, we will receive exclusive licenses from Biogen Idec and be obligated to make modest royalty payments to Biogen Idec.

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        In August 2004, we entered into a collaboration agreement with Biogen Idec to discover, develop and commercialize small molecule inhibitors of Raf kinase and up to five additional targets. The primary focus of the program is to discover small molecule inhibitors of kinases that play a role in oncology indications or in the regulation of the human immune system. During the research term, we and Biogen Idec agreed to work together exclusively to develop pharmaceutical compounds against collaboration targets with the exception that either party may collaborate with a third party on a Phase II clinical trial or later stage compound against a collaboration target. Our exclusivity obligation continues for an additional year after the end of the research term. We also agreed not to develop or commercialize any compound active against a collaboration target that is the subject of the agreement.

        Pursuant to this agreement, we received a $7.0 million upfront technology access fee. In addition, Biogen Idec made a $14.0 million equity investment in our company. To date, we have received payments totaling $22.7 million under this collaboration, including the $14.0 million equity investment. The initial research term is four years, and both parties agreed to dedicate the research personnel provided in the research plan. Biogen Idec has the option to extend the research term for up to two additional one-year periods upon payment of an additional technology access fee and a commitment to provide research funding. Biogen Idec will bear all costs related to this program for all targets through at least the completion of Phase I clinical trials, after which we have the right to participate in the co-development and co-promotion of up to two targets.

        We granted Biogen Idec a worldwide non-exclusive license to our intellectual property relating to Tethering with respect to specific collaboration targets and an exclusive license to our portion of the collaboration intellectual property for the commercialization of small molecule compounds that have a specified activity against collaboration kinases arising from the collaboration. Biogen Idec is required to pay up to $60.5 million in pre-commercialization milestones per target as well as royalty payments depending on product sales. Royalty payments may be increased if we exercise our option on co-development and co-promotion rights. Royalty rates payable to us will be reduced if Biogen Idec is required to license additional intellectual property related to Tethering from one or more third parties in order to commercialize a collaboration product. Rights to collaboration products revert to us with a reverse royalty to Biogen Idec if Biogen Idec fails to use commercially reasonable and diligent efforts during development and commercialization of co-funded products. If we do not exercise our co-funding option for a product directed at a target selected for further collaborative work, then Biogen Idec may pursue such target on its own. We also have a non-exclusive license, with the right to obtain an exclusive license, from Biogen Idec under joint collaboration intellectual property to develop and commercialize products against other kinase targets. We will owe royalty payments to Biogen Idec for sales of any such products. Royalty obligations under the agreement continue on a country-by-country and product-by-product basis until the later of the date on which no valid patent claim relating to a product exists or 10 years from the date of first sale of the product.

        Our agreement with Biogen Idec will continue for so long as a product arising from the collaboration is the subject of an active development project or for so long as there is an obligation to pay royalties under the agreement. The agreement may be terminated earlier by Biogen Idec without cause at any time before the second anniversary of the agreement upon six months' written notice or immediately upon written notice and payment of a termination fee. After the second anniversary of the agreement, Biogen Idec may terminate the agreement without cause upon 90 days' written notice. Either party may also terminate the agreement for the other party's uncured breach or bankruptcy. If Biogen Idec terminates the agreement early without cause or we terminate due to Biogen Idec's breach or bankruptcy, all co-funded products not approved for sale prior to termination will revert to us, and we will receive a reduction in the royalties we owe to Biogen Idec. If Biogen Idec terminates the agreement early due to our breach or bankruptcy, Biogen Idec will receive a reduction in the royalties

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it owes to us. Many of the parties' other product rights are not substantially affected by early termination.

        In May 2002, we entered into a collaboration agreement with Johnson & Johnson PRD to discover, develop and commercialize small molecule inhibitors of Cathepsin S, an enzyme that is important in regulating an inflammatory response. During the period of the research term plus two years, we and Johnson & Johnson PRD agreed to work together exclusively to develop pharmaceutical compounds against Cathepsin S. Johnson & Johnson PRD retains the sole right to determine whether a product candidate enters development. Johnson & Johnson PRD holds worldwide rights to commercialize any drugs resulting from this program.

        The agreement provides for payment by Johnson & Johnson PRD to us of a technology access fee and research funding. To date, we have received payments totaling $5.0 million under this collaboration. The initial research term was two years, and Johnson & Johnson PRD had the option to extend the research term for up to two additional one-year periods with the same level of research funding. Johnson & Johnson PRD exercised its first option to extend the research term through May 2005, and in December 2004, Johnson & Johnson PRD extended the research term further to December 31, 2005. We do not expect that this collaboration will be extended beyond 2005.

        We granted Johnson & Johnson PRD a worldwide non-exclusive license to our intellectual property relating to Tethering on Cathepsin S and an exclusive license under the collaboration intellectual property for the commercialization of small molecule products arising from the collaboration. Patents and patent applications arising from the collaboration are owned by our company. Johnson & Johnson PRD is required to pay research and development milestones of up to $24.5 million well as royalty payments depending on product sales. Royalty rates payable to us may be reduced if Johnson & Johnson PRD is required to license additional intellectual property related to Tethering from one or more third parties in order to commercialize a collaboration product. Royalty obligations under the agreement continue on a country-by-country and product-by-product basis until the later of the date on which no valid patent claim relating to a product exists or 10 years from the date of first sale of the product.

        Our agreement with Johnson & Johnson PRD will continue for so long as a product arising from the collaboration is the subject of an active development project or for so long as there is an obligation to pay royalties under the agreement. Johnson & Johnson PRD may terminate the agreement earlier without cause after the end of the research term and upon six months' written notice, and either party may terminate the agreement earlier for the other party's uncured breach or bankruptcy. All early terminations extinguish Johnson & Johnson PRD's licenses from us. If Johnson & Johnson PRD terminates the agreement early without cause or if we terminate due to Johnson & Johnson PRD's breach or bankruptcy, Johnson & Johnson PRD will grant us certain exclusive licenses and transfer its regulatory filings to us, and we will be obligated to pay modest royalties to Johnson & Johnson PRD in return.

        In February 2003, we entered into a license and collaboration agreement with Merck to discover, develop and commercialize small molecule inhibitors of BACE, or beta secretase, an enzyme that is believed to be important for the progression of Alzheimer's disease. During the period of the research term plus one year, we and Merck agreed to work together exclusively to develop a pharmaceutical compound against the collaboration target, with the exception that Merck may acquire from a third party a compound that satisfies development candidate criteria specified in the agreement. Merck holds worldwide rights to commercialize any drugs resulting from this collaboration.

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        The agreement provides for payment by Merck to us of a technology access fee and research funding. To date, we have received payments totaling $11.2 million under this collaboration. The initial research term is three years and both parties agreed to dedicate the resource funding provided in the research plan. Merck has the option to extend the research term for an additional one-year period with the same level of research funding.

        We granted Merck a worldwide, non-exclusive license to our intellectual property relating to Tethering on BACE and an exclusive license to a composition of matter patent and future intellectual property relating to BACE. Merck is required to pay research and development milestones of up to $90.3 million as well as royalty payments depending on product sales. Royalty rates payable to us may be reduced if Merck is required to license additional intellectual property from one or more third parties in order to commercialize a collaboration product or if a third party markets a version of the collaboration product. Royalty obligations under the agreement continue on a country-by-country and product-by-product basis until the later of the date on which no valid patent claim relating to a product exists or 12 years from the date of first sale of the product. We retain the right to develop and commercialize non-pharmaceutical products containing compounds arising from the collaboration. We would owe Merck a royalty based on sales of any such products.

        Our agreement with Merck will continue for so long as a product arising from the collaboration is the subject of an active development project or for so long as there is an obligation to pay royalties under the agreement. The agreement may be terminated earlier by Merck at any time after the third anniversary of the agreement upon three months' written notice, or may be terminated by either party for the other party's uncured breach or bankruptcy.

        In July 2004, we entered into a license and collaborative research agreement with Merck that allows Merck to discover and develop small molecule drugs against an enzyme target for treating viral infections. During the period from the beginning of the research term until the time that Merck ceases activities against the enzyme target, we agreed not to work with any third party on compounds that inhibit the enzyme target. Merck holds worldwide rights to commercialize any drugs resulting from this collaboration.

        The agreement provides for a payment by Merck to us of an upfront technology access fee and annual license fees. To date, we have received $2.6 million under this collaboration. The initial research term is three years and may be extended for one year upon mutual agreement of the parties. Merck may end the research term in January 2006 upon 90 days' written notice.

        We assigned to Merck small molecule compounds related to the viral target and our interest in research program patents and to compounds that act on the target through our inhibition mode. Merck owns all intellectual property generated in the course of performing the research except for improvements related to Tethering, which we own. Merck is required to pay pre-commercialization milestones of up to $22.1 million as well as royalty payments based on product sales. Royalty rates payable to us may be reduced if Merck is required to license additional intellectual property from one or more third parties in order to commercialize a collaboration product. Merck may also reduce its royalty payments to us if the product is not covered by a patent or if a third party markets a competitive product. Royalty obligations under the agreement continue on a country-by-country and product-by-product basis until the later of the date on which no valid patent claim relating to a product exists or 12 years from the date of first sale of the product.

        Our agreement with Merck will continue for so long as a product arising from the collaboration is the subject of an active development project or for so long as there is an obligation to pay royalties under the agreement. The agreement may be terminated earlier by Merck on the 18-month anniversary

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of the agreement upon 90 days' written notice, or may be terminated by either party for the other party's uncured breach or bankruptcy.

        In October 2003, we entered into a licensing agreement with Dainippon Pharmaceutical in which we obtained a worldwide exclusive license, including the right to sublicense, to SNS-595 and related compounds.

        The agreement provides to Dainippon an upfront payment and milestone payments of up to $10.7 million for starting Phase II clinical testing, Phase III clinical testing, and for filing NDAs and receiving regulatory approval in the United States, Europe and Japan for cancer treatment. If SNS-595 is approved for a cancer indication in the United States, Europe or Japan, milestone payments become payable to Dainippon. If SNS-595 is approved for a non-cancer indication, additional milestone payments become payable to Dainippon.

        The agreement also provides for royalty payments to Dainippon at rates that are based on total annual net sales. We may reduce our royalty payments to Dainippon if a third party markets a competitive product or we must pay royalties for third party intellectual property rights necessary to commercialize SNS-595. Royalty obligations under the agreement continue on a country-by-country and product-by-product basis until the later of the date on which no valid patent claims relating to a product exist or 10 years from the date of the first sale of the product.

        If we discontinue seeking regulatory approval and/or sale of the product in a region, we are required to return to Dainippon its rights to the product in that region. The agreement may be terminated by either party for the other party's uncured breach or bankruptcy.

        In April 2005, we entered into a licensing agreement with BMS in which we obtained worldwide exclusive and non-exclusive diagnostic and therapeutic licenses, including rights to sublicense, to SNS-032 and any related compounds that are active against CDK-1, -2, -4, -7 and -9 and are covered by licensed intellectual property.

        The agreement provides to BMS an upfront payment of $8 million payable in our Series C-2 preferred stock, and milestone payments totaling up to $78 million for beginning Phase I, Phase II and Phase III clinical testing, and for filing NDAs and receiving regulatory approval in the United States, Europe and Japan as well as for achieving certain commercial milestones. Milestone payments are distributed among IV and oral formulations and various cancer indications. We may pay some of these milestone payments in equity or a mixture of cash and equity, rather than entirely in cash.

        The agreement also provides for royalty payments to BMS at rates that are based on total annual net sales. Royalty obligations under the agreement continue on a country-by-country basis until the later of (1) expiration of all patents that are owned by us or exclusively licensed to us (whether by BMS or a third party) that cover a licensed product, (2) 10 years following the first commercial sale of a licensed product or (3) expiration of all applicable data exclusivity with respect to a licensed product.

        After completion of any Phase II clinical trial with SNS-032 or other licensed product under a U.S. IND, should we desire to sublicense our rights under the agreement, BMS will have the first right to negotiate with us for such sublicense. If Sunesis and BMS do not reach agreement within a designated length of time, then we are free to sublicense to any third party provided the financial terms are not less favorable than those offered to BMS. We cannot grant a sublicense to any third party before the completion of such Phase II clinical trial unless we receive BMS's consent.

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        The agreement may be terminated by BMS for our uncured breach (other than a diligence breach) or bankruptcy. BMS may terminate this agreement on a country by country basis for our uncured failure to use commercially reasonable efforts to develop and/or commercialize at least one licensed compound or licensed product in a particular country or territory. Further, if such uncured failure occurs in certain countries, BMS may terminate this agreement as to entire designated territories. BMS may also terminate this agreement if we develop or market a competitive product within certain designated time frames. We may terminate this agreement with respect to a specific licensed product in a particular country without cause but with a specified notice period. We may also terminate this agreement for BMS's uncured breach.

Intellectual Property

        We patent the technology, inventions and improvements that we consider important to the development of our business. As of the date of this prospectus, we owned or had exclusive rights to 59 issued U.S. and foreign patents and 112 pending U.S. and foreign patent applications. Forty-three issued patents and seven pending applications relate to SNS-595, which cover compositions of matter and method of use in oncology and formulations. The issued patents are generally due to expire in 2015. The U.S. composition of matter patent is due to expire on October 6, 2015, and most of its foreign counterparts are due to expire on June 6, 2015. Two pending U.S. applications in each of our Aurora and Raf kinase programs relate to composition of matter, methods of use in oncology and other kinase-mediated diseases and formulations. We intend to seek patent term extension that may be available, including under the Hatch-Waxman Act, which provides up to five years of patent extension. Four issued patents relate to SNS-032. The U.S. composition of matter patent covering SNS-032 is due to expire on October 21, 2018 and most of its foreign counterparts are due to expire on December 7, 2020. Four issued patents, which will expire between 2018 and 2021, and 55 pending applications relate to Tethering. The remaining patents and applications relate to other aspects of our technology or other drug discovery programs that we are no longer actively pursuing.

        Our ability to build and maintain our proprietary position for our technology and drug candidates will depend on our success in obtaining effective claims and enforcing those claims once granted. The patent positions of biopharmaceutical companies like ours are generally uncertain and involve complex legal and factual questions for which important legal principles remain unresolved. No consistent policy regarding the breadth of patent claims has emerged to date in the United States. The patent situation outside the United States is even more uncertain. We do not know whether any of our patent applications or those patent applications that we license will result in the issuance of any patents. The patents we own or license and those that may issue in the future, may be challenged, invalidated or circumvented, and the rights granted under any issued patents may not provide us with proprietary protection or competitive advantages.

        We may not be able to develop patentable products or be able to obtain patents from pending patent applications. Even if patents are issued, they may not be sufficient to protect the technology and drug candidates owned by or licensed to us. These current patents and patents that may issue in the future may be challenged, invalidated, infringed or circumvented, and the rights granted in those patents may not provide proprietary protection or competitive advantage to us. Patent applications filed before November 29, 2000 in the United States are maintained in secrecy until patents issue. Later filed U.S. applications and patent applications in most foreign countries generally are not published until at least 18 months after they are filed. Scientific and patent publication often occurs long after the date of the scientific discoveries disclosed in those publications. Accordingly, we cannot be certain that we were the first to invent the subject matter covered by any patent application or that we were the first to file a patent application for any inventions.

        Our commercial success depends on our ability to operate without infringing patents and proprietary rights of third parties. We cannot determine with certainty whether patents or patent

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applications of other parties may materially affect our ability to conduct our business. The existence of third party patent applications and patents could significantly reduce the coverage of patents owned by or licensed to us and limit our ability to obtain meaningful patent protection. If patents containing competitive or conflicting claims are issued to third parties and these claims are ultimately determined to be valid, we may be enjoined from pursuing research, development or commercialization of products, or be required to obtain licenses to these patents or to develop or obtain alternative technology.

        We may need to commence litigation to enforce any patents issued to us or to determine the scope and validity of third party proprietary rights. Litigation would result in substantial costs, even if the eventual outcome is favorable to us. An adverse outcome in litigation could subject us to significant liabilities to third parties and require us to seek licenses of the disputed rights from third parties or to cease using the technology if such licenses are unavailable.

        We also rely on trade secrets to protect our technology, especially where we do not believe patent protection is appropriate or obtainable. However, trade secrets are difficult to protect.

        We seek to protect our proprietary information by requiring our employees, consultants, contractors and other advisers to execute nondisclosure and assignment of invention agreements upon commencement of their employment or engagement. Agreements with our employees also prevent them from bringing the proprietary rights of third parties to us. We also require confidentiality or material transfer agreements from third parties that receive our confidential data or materials. There can be no assurance that these agreements will provide meaningful protection, that these agreements will not be breached, that we will have an adequate remedy for any such breach, or that our trade secrets will not otherwise become known or independently developed by a third party.

Government Regulation

        FDA and comparable regulatory agencies in state and local jurisdictions and in foreign countries impose substantial requirements upon the clinical development, manufacture, marketing and distribution of drugs. These agencies and other federal, state and local entities regulate research and development activities and the testing, manufacture, quality control, safety, efficacy, labeling, storage, record keeping, approval, advertising and promotion of our drug candidates and drugs.

        In the United States, FDA regulates drugs under the Federal Food, Drug, and Cosmetic Act, or FFDCA, and implementing regulations. The process required by FDA before our drug candidates may be marketed in the United States generally involves the following:

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        The testing and approval process requires substantial time, effort and financial resources, and we cannot be certain that any approvals for our drug candidates will be granted on a timely basis, if at all.

        Preclinical tests include laboratory evaluation of product chemistry, formulation and stability, as well as studies to evaluate toxicity in animals. The results of preclinical tests, together with manufacturing information and analytical data, are submitted as part of an IND application to FDA. The IND automatically becomes effective 30 days after receipt by FDA, unless FDA, within the 30-day time period, raises concerns or questions about the conduct of the clinical trial, including concerns that human research subjects will be exposed to unreasonable health risks. In such a case, the IND sponsor and FDA must resolve any outstanding concerns before the clinical trial can begin. Our submission of an IND, or those of our collaboration partners, may not result in FDA authorization to commence a clinical trial. A separate submission to an existing IND must also be made for each successive clinical trial conducted during product development, and FDA must grant permission before each clinical trial can begin. Further, an independent institutional review board, or IRB, for each medical center proposing to conduct the clinical trial must review and approve the plan for any clinical trial before it commences at that center and it must monitor the study until completed. FDA, the IRB or the sponsor may suspend a clinical trial at any time on various grounds, including a finding that the subjects or patients are being exposed to an unacceptable health risk. Clinical testing also must satisfy extensive Good Clinical Practice, or GCP, requirements and regulations for informed consent.

        For purposes of NDA submission and approval, clinical trials are typically conducted in the following three sequential phases, which may overlap:

        In some cases, FDA may condition approval of an NDA for a drug candidate on the sponsor's agreement to conduct additional clinical trials to further assess the drug's safety and effectiveness after NDA approval. Such post-approval trials are typically referred to as Phase IV clinical trials.

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        The results of drug candidate development, preclinical testing and clinical trials are submitted to FDA as part of an NDA. The NDA also must contain extensive manufacturing information. Once the submission has been accepted for filing, by law FDA has 180 days to review the application and respond to the applicant. The review process is often significantly extended by FDA requests for additional information or clarification. FDA may refer the NDA to an advisory committee for review, evaluation and recommendation as to whether the application should be approved. FDA is not bound by the recommendation of an advisory committee, but it generally follows such recommendations. FDA may deny approval of an NDA if the applicable regulatory criteria are not satisfied, or it may require additional clinical data or an additional pivotal Phase III clinical trial. Even if such data are submitted, FDA may ultimately decide that the NDA does not satisfy the criteria for approval. Data from clinical trials are not always conclusive and FDA may interpret data differently than we or our collaboration partners interpret data. Once issued, FDA may withdraw drug approval if ongoing regulatory requirements are not met or if safety problems occur after the drug reaches the market. In addition, FDA may require testing, including Phase IV clinical trials, and surveillance programs to monitor the effect of approved products that have been commercialized, and FDA has the power to prevent or limit further marketing of a drug based on the results of these post-marketing programs. Drugs may be marketed only for the approved indications and in accordance with the provisions of the approved label. Further, if there are any modifications to the drug, including changes in indications, other labeling changes, or manufacturing processes or facilities, we may be required to submit and obtain FDA approval of a new NDA or NDA supplement, which may require us to develop additional data or conduct additional preclinical studies and clinical trials.

        FDA's fast track program is intended to facilitate the development and to expedite the review of drugs that are intended for the treatment of a serious or life-threatening condition for which there is no effective treatment and which demonstrate the potential to address unmet medical needs for the condition. Under the fast track program, the sponsor of a new drug candidate may request FDA to designate the drug candidate for a specific indication as a fast track drug concurrent with or after the filing of the IND for the drug candidate. FDA must determine if the drug candidate qualifies for fast track designation within 60 days of receipt of the sponsor's request.

        If fast track designation is obtained, FDA may initiate review of sections of an NDA before the application is complete. This rolling review is available if the applicant provides and FDA approves a schedule for the submission of the remaining information and the applicant pays applicable user fees. However, the time period specified in the Prescription Drug User Fees Act, which governs the time period goals FDA has committed to reviewing an application, does not begin until the complete application is submitted. Additionally, the fast track designation may be withdrawn by FDA if FDA believes that the designation is no longer supported by data emerging in the clinical trial process.

        In some cases, a fast track designated drug candidate may also qualify for one or more of the following programs:

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        When appropriate, we and our collaboration partners intend to seek fast track designation, accelerated approval or priority review for our drug candidates. We cannot predict whether any of our drug candidates will obtain a fast track or accelerated approval designation, or the ultimate impact, if any, of the fast track or the accelerated approval process on the timing or likelihood of FDA approval of any of our drug candidates.

        Satisfaction of FDA regulations and approval requirements or similar requirements of foreign regulatory agencies typically takes several years and the actual time required may vary substantially based upon the type, complexity and novelty of the product or disease. Typically, if a drug candidate is intended to treat a chronic disease, as is the case with some of the drug candidates we are developing, safety and efficacy data must be gathered over an extended period of time. Government regulation may delay or prevent marketing of drug candidates for a considerable period of time and impose costly procedures upon our activities. FDA or any other regulatory agency may not grant approvals for new indications for our drug candidates on a timely basis, or at all. Even if a drug candidate receives regulatory approval, the approval may be significantly limited to specific disease states, patient populations and dosages. Further, even after regulatory approval is obtained, later discovery of previously unknown problems with a drug may result in restrictions on the drug or even complete withdrawal of the drug from the market. Delays in obtaining, or failures to obtain, regulatory approvals for any of our drug candidates would harm our business. In addition, we cannot predict what adverse governmental regulations may arise from future United States or foreign governmental action.

        Any drugs manufactured or distributed by us or our collaborators pursuant to FDA approvals are subject to continuing regulation by FDA, including recordkeeping requirements and reporting of adverse experiences associated with the drug. Drug manufacturers and their subcontractors are required to register their establishments with FDA and certain state agencies, and are subject to periodic unannounced inspections by FDA and certain state agencies for compliance with ongoing regulatory requirements, including cGMPs, which impose certain procedural and documentation requirements upon us and our third-party manufacturers. Failure to comply with the statutory and regulatory requirements can subject a manufacturer to possible legal or regulatory action, such as warning letters, suspension of manufacturing, seizure of product, injunctive action or possible civil penalties. We cannot be certain that we or our present or future third-party manufacturers or suppliers will be able to comply with the cGMP regulations and other ongoing FDA regulatory requirements. If our present or future third-party manufacturers or suppliers are not able to comply with these requirements, FDA may halt our clinical trials, require us to recall a drug from distribution, or withdraw approval of the NDA for that drug.

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        FDA closely regulates the post-approval marketing and promotion of drugs, including standards and regulations for direct-to-consumer advertising, off-label promotion, industry-sponsored scientific and educational activities and promotional activities involving the Internet. A company can make only those claims relating to safety and efficacy that are approved by FDA. Failure to comply with these requirements can result in adverse publicity, warning letters, corrective advertising and potential civil and criminal penalties. Physicians may prescribe legally available drugs for uses that are not described in the drug's labeling and that differ from those tested by us and approved by FDA. Such off-label uses are common across medical specialties, and and cancer therapy. Physicians may believe that such off-label uses are the best treatment for many patients in varied circumstances. FDA does not regulate the behavior of physicians in their choice of treatments. FDA does, however, impose stringent restrictions on manufacturers' communications regarding off-label use.

        In addition to regulations in the United States, we will be subject to a variety of foreign regulations governing clinical trials and commercial sales and distribution of our future products. Whether or not we obtain FDA approval for a product, we must obtain approval of a product by the comparable regulatory authorities of foreign countries before we can commence clinical trials or marketing of the product in those countries. The approval process varies from country to country, and the time may be longer or shorter than that required for FDA approval. The requirements governing the conduct of clinical trials, product licensing, pricing and reimbursement vary greatly from country to country.

        Under European Union regulatory systems, marketing authorizations may be submitted either under a centralized or mutual recognition procedure. The centralized procedure provides for the grant of a single marking authorization that is valid for all European Union member states. The mutual recognition procedure provides for mutual recognition of national approval decisions. Under this procedure, the holder of a national marking authorization may submit an application to the remaining member states. Within 90 days of receiving the applications and assessment report, each member state must decide whether to recognize approval.

        In addition to regulations in Europe and the United States, we will be subject to a variety of foreign regulations governing clinical trials and commercial distribution of our future products.

Manufacturing

        We outsource the manufacture of SNS-595 to third-party contract manufacturers. The active pharmaceutical ingredient of SNS-595 is manufactured by a single-source supplier through a 13-step convergent synthesis in which two intermediates are manufactured in a parallel process and then combined and deprotected in the final two steps. The active pharmaceutical ingredient is then formulated and vials are filled and finished by a different third party manufacturer. The active pharmaceutical ingredient is classified as a toxic substance, which limits the number of suppliers qualified to manufacture it. We have a sufficient supply of both the active pharmaceutical ingredient for SNS-595 and finished product to conduct our current and planned clinical trials of SNS-595 through the fourth quarter of 2005. We expect that additional active pharmaceutical ingredient and finished product will be manufactured, tested and released by the third quarter of 2005.

        We will outsource the manufacture of SNS-032 to third-party contract manufacturers. As part of our agreement with BMS, we acquired enough of the active pharmaceutical ingredients of SNS-032 for at least our planned Phase I clinical trial for SNS-032. However, before we are able to commence this trial, we must convert the active pharmaceutical ingredients into finished product. We expect that a sufficient supply of finished product to conduct our planned clinical trial of SNS-032 will be manufactured, tested and released by the third quarter of 2005.

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Competition

        We compete primarily in the segments of the biopharmaceutical markets that address cancer and inflammatory diseases, each of which is highly competitive. We face significant competition from many pharmaceutical, biopharmaceutical and biotechnology companies that are researching and selling products designed to address cancer and inflammatory diseases. Many of our competitors have significantly greater financial, manufacturing, marketing and drug development resources than we do. Large pharmaceutical companies in particular have extensive experience in clinical testing and in obtaining regulatory approvals for drugs. These companies also have significantly greater research capabilities than we do. In addition, many universities and private and public research institutes are active in cancer and inflammation research, some of which are in direct competition with us.

        SNS-595 will compete with a number of cytotoxic drugs that are currently marketed or in development that also target proliferating cells but at different points of the cell cycle or with a different mechanism of action. These drugs include irinotecan, doxorubicin, taxanes and other cell-cycle inhibitors. To compete effectively with these agents, SNS-595 will need to demonstrate advantages that lead to improved clinical efficacy compared to these competitors. We believe there are currently over 40 cell-cycle inhibitors undergoing clinical trials.

        SNS-032 is a CDK inhibitor. We believe that several companies, including Cyclacel, AstraZeneca, Schering AG and Pfizer are conducting Phase I or Phase II clinical trials with similar compounds and others are developing CDK inhibitors that may compete with SNS-032. We are not aware of any CDK inhibitors that are currently being marketed.

        We are not aware of any marketed Aurora kinase inhibitors to treat cancer. We believe, however, that Vertex and Merck are co-developing an Aurora kinase inhibitor and that Millennium Pharmaceuticals, Rigel Pharmaceuticals, Pfizer, AstraZeneca, Schering AG and others also may be developing Aurora kinase inhibitors. Other molecules that may compete with our Aurora kinase inhibitor may include other naturally occurring cytotoxics.

        We believe that our Raf kinase inhibitor would compete with BAY 43-9006 developed jointly by Bayer AG and Onyx Pharmaceuticals and several compounds developed by Pfizer. Onyx and Bayer recently announced their intention to file an NDA and to seek accelerated approval basis on interim results from one of their Phase III clinical trials.

        We also compete with other companies that may be pursuing drug discovery using other technologies, including fragment-based technologies.

        We believe that our ability to successfully compete will depend on, among other things:

    our ability to develop novel compounds with attractive pharmaceutical properties and to secure and protect intellectual property rights based on our innovations;

    the efficacy, safety and reliability of our drug candidates;

    the speed at which we develop our drug candidates;

    our ability to design and successfully execute appropriate clinical trials;

    our ability to maintain a good relationship with regulatory authorities;

    the timing and scope of regulatory approvals;

    the success of our collaborations;

    our ability to manufacture and sell commercial quantities of future products to the market; and

    acceptance of future products by physicians and other healthcare providers.

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Facilities

        As of December 31, 2004, we leased approximately 54,000 square feet of office and laboratory space in South San Francisco, California. Our lease expires in June 2013, subject to our option to extend the lease through June 2018. We believe that our current facilities will be sufficient to meet our needs through 2005. We may lease or sublease additional space that we believe will be available on commercially reasonable terms.

Employees

        As of December 31, 2004, our workforce consisted of 113 full-time employees, 48 of whom hold Ph.D. or M.D. degrees, or both, and 24 of whom hold other advanced degrees. Of our total workforce, 92 are engaged in research and development and 21 are engaged in business development, finance, legal, human resources, facilities and information technology administration and general management. We have no collective bargaining agreements with our employees, and we have not experienced any work stoppages. We believe that our relations with our employees are good.

Legal Proceedings

        From time to time, we may be involved in litigation relating to claims arising out of our operations. We are not currently involved in any material legal proceedings.

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MANAGEMENT

Executive Officers and Directors

        The following table lists our executive officers and directors and their respective ages and positions as of April 16, 2005:

Name
  Age
  Position
James W. Young, Ph.D.   60   Executive Chairman
Daniel N. Swisher, Jr.   42   Chief Executive Officer and Director
James A. Wells, Ph.D.   54   President, Chief Scientific Officer and Director
Eric H. Bjerkholt   45   Senior Vice President and Chief Financial Officer
Daniel C. Adelman, M.D.   47   Senior Vice President, Drug Discovery and Development
Daryl B. Winter, Ph.D., J.D.   61   Senior Vice President, General Counsel and Corporate Secretary
Anthony B. Evnin, Ph.D. (1)(2)   64   Director
Stephen P.A. Fodor, Ph.D. (3)   51   Director
Steven D. Goldby (1)(3)   65   Director
Russell C. Hirsch, M.D., Ph.D. (2)(3)   42   Director
Jonathan S. Leff (1)(2)   36   Director

(1)
Member of the audit committee.

(2)
Member of the compensation committee.

(3)
Member of the nominating and corporate governance committee.

         James W. Young, Ph.D. has served as our Executive Chairman since December 2003. From May 2000 to November 2003, Dr. Young served as our Chief Executive Officer. From September 1995 to March 2000, Dr. Young served as Vice President for Research, as Senior Vice President, Research and Development, and as Group Vice President at ALZA Corporation, a provider of drug delivery solutions. From September 1992 to August 1995, Dr. Young served as Senior Vice President for Business Development and as President of the Pharmaceuticals Division of Affymax, N.V., a drug discovery and product development company. From September 1987 to August 1992, he served as Senior Vice President for Business Development and as Senior Vice President and General Manager of the Pharmaceuticals Division at Sepracor Inc. Dr. Young is a member of the Board of Directors of Corixa Corporation, a biotechnology company, and a privately held company. Dr. Young holds a B.S. in Chemistry from Fordham University and a Ph.D. in Organic Chemistry from Cornell University.

         Daniel N. Swisher, Jr. has served as our Chief Executive Officer and a member of our board of directors since December 2003. From December 2001 to December 2003, he served as our Chief Business Officer and Chief Financial Officer. From June 1992 to September 2001, Mr. Swisher served in various management roles, including Senior Vice President of Sales and Marketing for ALZA Corporation. Mr. Swisher holds a B.A. in History from Yale University and an M.B.A. from the Stanford Graduate School of Business.

         James A. Wells, Ph.D. is a co-founder of our company and has served as our President and Chief Scientific Officer since April 1998 and as a member of our board of directors since our inception in 1998. Dr. Wells formerly was a staff scientist at Genentech, Inc. He is an Adjunct Professor of Pharmaceutical Chemistry at the University of California, San Francisco. He has published more than 100 peer-reviewed scientific papers and has been named inventor on more than 50 issued or filed patents. He has won a number of research awards including the Pfizer Award in Enzyme Chemistry given by the American Chemical Society in 1990, the DuVignead award given by the American Peptide Society in 1998, the Aviv Award given by the Protein Society in 1998 and the Hans Neurath Award

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given by the Protein Society in 2003. In 1999, he was elected Member to the U.S. National Academy of Sciences. Dr. Wells is a member of the Board of Directors and of the Scientific Advisory Board of a privately held company. Dr. Wells holds a B.A. in Biochemistry from the University of California at Berkeley and a Ph.D. in Biochemistry from Washington State University and was a Damon Runyon-Walter Winchell Post-doctoral Fellow in the Biochemistry Department at Stanford University.

         Eric H. Bjerkholt has served as our Senior Vice President and Chief Financial Officer since January 2004. From January 2002 to January 2004, Mr. Bjerkholt served as Senior Vice President and Chief Financial Officer at IntraBiotics Pharmaceuticals, Inc., a biopharmaceutical company. Mr. Bjerkholt was a co-founder of LifeSpring Nutrition, Inc., a privately held nutraceutical company, and from May 1999 to March 2002 served at various times as its Chief Executive Officer, President and Chief Financial Officer. From 1990 to 1997, Mr. Bjerkholt was an investment banker at J.P. Morgan & Co. Mr. Bjerkholt is a member of the Board of Directors of Stem Cells, Inc., a publicly held biotechnology company, and a privately held company. Mr. Bjerkholt holds a Cand. Oecon degree in Economics from the University of Oslo and an M.B.A. from Harvard Business School.

         Daniel C. Adelman, M.D. has served as our Senior Vice President of Drug Discovery and Development since September 2004. From May 2003 to August 2003, he served as our Senior Vice President of Clinical Development. From May 1998 to May 2003, Dr. Adelman served in various roles, including Vice President of Clinical Operations and Biometrics at Pharmacyclics, Inc., a pharmaceutical company. From December 1994 to May 1998, Dr. Adelman served as Clinical Scientist at Genentech, Inc. Dr. Adelman began his career at University of California, San Francisco, School of Medicine, where he was Director of Clinical Allergy/Immunology in the Division of Allergy and Immunology, and Director of the Outpatient Center for Clinical Research. He continues to serve as Adjunct Professor of Medicine at University of California, San Francisco, is a fellow of both the American Academy of Allergy and Immunology and the American College of Physicians and is on the editorial board of Clinical Immunology. Dr. Adelman is board-certified in allergy and immunology and completed a National Institutes of Health/Public Health Service Tumor Immunology Fellowship at University of California, Los Angeles, School of Medicine. He holds a B.A. in Biology from University of California, Berkeley and an M.D. from the University of California, Davis.

         Daryl B. Winter, Ph.D., J.D. has served as our Senior Vice President, General Counsel and Corporate Secretary since April 2000. From July 1989 to January 1999, Dr. Winter served as patent and licensing counsel at Genentech, Inc. Dr. Winter holds a B.S. in Chemistry from the University of Washington and a Ph.D. in Biochemistry from the State University of New York and was a National Institutes of Health Post-doctoral Fellow. He also holds a J.D. from Northwestern School of Law.

         Anthony B. Evnin, Ph.D. has served as a member of our board of directors since 1998. Dr. Evnin has been with Venrock Associates, a venture capital firm, since 1974 and is currently a Managing General Partner. He is currently a member of the Board of Directors of Icagen, Inc., Memory Pharmaceuticals Corp. and Renovis, Inc., each a biopharmaceutical company, as well as being on the board of directors of a number of private companies. He holds an A.B. in Chemistry from Princeton University and a Ph.D. in Chemistry from Massachusetts Institute of Technology.

         Stephen P.A. Fodor, Ph.D. has served as a member of our board of directors since 2001. Dr. Fodor is a co-founder of Perlegen Sciences, Inc., a biotechnology company, and has served as Chairman of Perlegen's Board of Directors since the company's inception. He is also founder, Chairman, and Chief Executive Officer of Affymetrix, Inc., a biotechnology company. Dr. Fodor previously held various positions at the Affymax Research Institute from 1989 to 1992, where he led the development of the GeneChip Technology. Dr. Fodor holds an M.S. in Biochemistry from Washington State University and an M.A. and a Ph.D. in Chemistry from Princeton University.

         Steven D. Goldby has served as a member of our board of directors since 2001. Since July 1998, Mr. Goldby has served as Chairman and Chief Executive Officer of Symyx Technologies, Inc., a

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material sciences company. From 1982 to 1997, Mr. Goldby served as Chief Executive Officer of MDL Information Systems, Inc. From 1968 to 1973, Mr. Goldby held various management positions at ALZA Corporation, including President of ALZA Pharmaceuticals. Mr. Goldby holds a B.S. in Chemistry from the University of North Carolina and a J.D. from Georgetown University Law Center.

         Russell C. Hirsch, M.D., Ph.D. has served as a member of our board of directors since 1998. Since February 2001, Dr. Hirsch has served as a Managing Director of Prospect Management Co. II, LLC. Prior to joining Prospect Management Co. II, LLC, he was a member of the Health Care Technology Group at Mayfield Fund. He joined Mayfield Fund in 1992 and served as a Venture Partner from 1993 to 1994 and as a General Partner from 1995 to 2000. Dr. Hirsch holds a B.A. in Chemistry from the University of Chicago and an M.D. and a Ph.D. in Biochemistry from the University of California, San Francisco.

         Jonathan S. Leff has served as a member of our board of directors since 2000. Since January 2000, Mr. Leff has served as a General Partner of Warburg, Pincus & Co., which is the Managing Partner of Warburg Pincus LLC, and as a Managing Director and Member of Warburg Pincus LLC. Mr. Leff served as a Vice President of Warburg Pincus LLC from January 1999 to December 1999 and as an Associate from July 1996 to December 1998. Mr. Leff serves on the Board of Directors of Allos Therapeutics, Inc., a biopharmaceutical company, Intermune, Inc., a biopharmaceutical company, Neurogen Corporation, a small molecule drug discovery and development company, Transkaryotic Therapies Inc., a biopharmaceutical company, ZymoGenetics Inc., a biotherapeutic company, and several private companies. Mr. Leff holds a B.A. in Government from Harvard University and an M.B.A. from the Stanford Graduate School of Business.

        Our executive officers are elected by, and serve at the discretion of, our board of directors. There are no family relationships between our directors and executive officers.

Board Composition

        Our amended and restated bylaws permit our board of directors to establish by resolution the authorized number of directors, and eight directors are currently authorized. In accordance with our amended and restated certificate of incorporation, immediately after this offering, our board of directors will be divided into three classes with staggered three-year terms. At each annual meeting of stockholders, the successors to directors whose terms then expire will be elected to serve from the time of election and qualification until the third annual meeting following election. Our directors have been divided among the three classes as follows:

    the Class I directors will be Drs. Fodor, Hirsch and Young, and their terms will expire at the annual meeting of stockholders to be held in 2005;

    the Class II directors will be Drs. Evnin and Wells and Mr. Goldby, and their terms will expire at the annual meeting of stockholders to be held in 2006; and

    the Class III directors will be Messrs. Leff and Swisher , and their terms will expire at the annual meeting of stockholders to be held in 2007.

        Our amended and restated certificate of incorporation provides that the authorized number of directors may be changed only by resolution of the board of directors. Any additional directorships resulting from an increase in the number of directors will be distributed among the three classes so that, as nearly as possible, each class will consist of one-third of the directors.

        The division of our board of directors into three classes with staggered three-year terms may delay or prevent a change of our management or a change in control.

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Voting Arrangement

        Pursuant to our Investor Rights Agreement that we entered into with a warrant holder and certain holders of our preferred stock, Credit Suisse First Boston Equity Partners, L.P. and its affiliates have the right to nominate a director to our board of directors and holders of Series C preferred stock are obligated to vote for such nominee. Mr. Goldby was elected to our board of directors pursuant to this agreement.

Board Committees

        Our board of directors has an audit committee, a compensation committee and a nominating and corporate governance committee.

    Audit Committee

        The audit committee is chaired by Mr. Leff, and also includes Dr. Evnin and Mr. Goldby, all of whom will be independent, within the meaning of applicable SEC and Nasdaq rules, upon completion of this offering. The board has designated Mr. Goldby as the audit committee financial expert, as such term is currently defined under the SEC rules implementing Section 407 of the Sarbanes-Oxley Act of 2002. We believe that the composition and functioning of our audit committee complies with all applicable requirements of the Sarbanes-Oxley Act of 2002, the Nasdaq National Market and SEC rules and regulations. We intend to comply with future requirements to the extent they become applicable to us.

        Our audit committee is responsible for, among other things:

    overseeing the accounting and financial reporting processes and audits of our financial statements;

    appointing independent auditors to audit our financial statements;

    overseeing and monitoring (a) the integrity of our financial statements, (b) our compliance with legal and regulatory requirements as they relate to financial statements or accounting matters, (c) our independent auditor's qualifications, independence and performance and (d) our internal accounting and financial controls;

    preparing the report that SEC rules require be included in our annual proxy statement;

    providing our board of directors with the results of its monitoring and recommendations; and

    providing to our board of directors additional information and materials as it deems necessary to make our board of directors aware of significant financial matters that require the attention of our board of directors.

    Compensation Committee

        The compensation committee is chaired by Dr. Evnin, and also includes Dr. Hirsch and Mr. Leff, all of whom will be independent, within the meaning of applicable Nasdaq rules, upon completion of this offering. Each member of the compensation committee is an "outside" director as that term is defined in Section 162(m) of the Internal Revenue Code of 1986, as amended, and a "non-employee" director within the meaning of Rule 16b-3 of the rules promulgated under the Securities Exchange Act of 1934, as amended. We believe that the composition and functioning of our compensation committee complies with all applicable requirements of the Nasdaq National Market. We intend to comply with future requirements to the extent they become applicable to us.

        Our compensation committee is responsible for, among other things:

    reviewing and approving for our chief executive officer and other executive officers (a) the annual base salary, (b) the annual incentive bonus, including the specific goals and amount,

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      (c) equity compensation, (d) employment agreements, severance arrangements, and change in control agreements/provisions and (e) any other benefits, compensations, compensation policies or arrangements;

    reviewing, approving and/or making recommendations to our board of directors regarding the compensation of our senior management and other employees;

    making recommendations to our board of directors regarding the compensation of members of our board;

    reviewing and approving general compensation goals and guidelines for employees and the criteria by which bonuses to employees are determined;

    preparing a report to be included in our annual proxy statement; and

    acting as administrator of our benefit plans, including making amendments to the plans, and changes in the number of shares reserved for issuance thereunder.

        Our compensation committee has the authority to delegate to one or more subcommittees to the extent allowed by applicable law.

    Nominating and Corporate Governance Committee

        The nominating and corporate governance committee is chaired by Mr. Goldby, and also includes Drs. Fodor and Hirsch, all of whom will be independent, within the meaning of applicable SEC and Nasdaq rules, upon completion of this offering. We believe that the composition and functioning of our nominating and corporate governance committee complies with all applicable requirements of the Nasdaq National Market and SEC rules and regulations. We intend to comply with future requirements to the extent they become applicable to us.

        Our nominating and corporate governance committee is responsible for, among other things:

    reviewing board structure, composition and practices, and making recommendations on these matters to our board of directors;

    reviewing, soliciting and making recommendations to our board of directors and stockholders with respect to candidates for election to our board of directors; and

    overseeing compliance by employees with our Code of Conduct.

Compensation Committee Interlocks and Insider Participation

        As noted above, the compensation committee of our board of directors consists of Drs. Evnin and Hirsch and Mr. Leff.

        None of the members of our compensation committee has, at any time, been one of our officers or employees. None of our executive officers currently serves, or in the past year has served, as a member of our board of directors or compensation committee of any entity that has one or more executive officers serving on our board of directors or compensation committee.

Director Compensation

        We do not currently provide cash compensation to members of our board of directors. In connection with their services as directors, Mr. Goldby was granted options to acquire 50,000 shares of common stock in January 2001 and January 2003 and Dr. Fodor was granted options to acquire 50,000 shares of common stock in March 2001 and January 2003. Each option grant has an exercise price of $0.60 per share and vests at a rate of 1/24th per month over a period of two years. Our non-employee directors are reimbursed for reasonable out-of-pocket expenses incurred in connection with attending board and committee meetings.

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Executive Compensation

        The following table sets forth the compensation awarded to, earned by or paid to our Chief Executive Officer and our other four most highly compensated executive officers whose total salary and bonus exceeded $100,000 for services rendered to us during 2003 and 2004. We refer to these persons as our "named executive officers" elsewhere in this prospectus.


Summary Compensation Table

 
   
   
   
  Long Term
Compensation

   
 
   
  Annual Compensation
   
Name and Principal Position

   
  Securities
Underlying
Options

  All Other
Compensation (1)

  Year
  Salary
  Bonus
Daniel N. Swisher, Jr.
Chief Executive Officer
  2004
2003
  $
305,000
268,992
  $
74,000
55,000
  390,000
200,000
  $
768
768
James A. Wells, Ph.D.
President and Chief Scientific Officer
  2004
2003
    265,000
260,000
    55,000
50,000
  80,000
200,000
    768
768
Daniel C. Adelman, M.D. (2)
Senior Vice President, Drug Discovery and Development
  2004
2003
    249,000
138,000
    60,000
25,000
  130,000
200,000
    768
448
Daryl B. Winter, Ph.D., J.D.
Senior Vice President and General Counsel
  2004
2003
    255,500
251,000
    60,000
45,000
  80,000
50,000
    768
768
Eric H. Bjerkholt (3)
Senior Vice President and Chief Financial Officer
  2004     240,682     55,000   325,000     768

(1)
Represents term life insurance and accidental death and dismemberment insurance premiums.

(2)
Dr. Adelman joined our company in May 2003.

(3)
Mr. Bjerkholt joined our company in January 2004.

Stock Option Grants in 2004

        The following table sets forth information with respect to stock options granted to our named executive officers during 2004.


2004 Option Grants

 
  Individual Grants
   
   
 
  Potential Realizable Value
at Assumed Annual Rates
of Stock Price Appreciation
for Option Term

 
  Number of
Securities
Underlying
Options
Granted

  Percent of
Total
Options
Granted
in 2004

   
   
 
  Exercise
Price Per
Share

  Expiration
Date

 
  5%
  10%
Daniel N. Swisher, Jr.   300,000
90,000
  14.8
4.4
%
$
0.60
0.60
  1/21/2014
6/24/2014
       
James A. Wells, Ph.D.   80,000   3.9     0.60   6/24/2014        
Daniel C. Adelman, M.D.   50,000
80,000
  2.5
3.9
    0.60
0.60
  1/21/2014
6/24/2014
       
Daryl B. Winter, Ph.D., J.D.   80,000   3.9     0.60   6/24/2014        
Eric H. Bjerkholt   250,000
75,000
  12.3
3.7
    0.60
0.60
  1/21/2014
6/9/2014
       

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        In 2004, we granted options to purchase an aggregate of 2,026,100 shares of our common stock to our employees, directors and consultants under our 1998 Stock Option Plan and our 2001 Stock Option Plan. These options vest over a four-year period with 25% vesting on the first anniversary of the date of grant and the remaining 75% vesting 1/48th per month over the subsequent 36 months, provided that 75,000 of such options granted to Mr. Bjerkholt vest upon our achievement of specified milestones. Each option has a 10-year term, subject to early termination if the optionee's service with us ceases. Upon termination of employment, vesting will typically cease and the employee will typically have three to six months to exercise any vested options. Under certain circumstances in connection with a change in control, the vesting of certain option grants may accelerate and become immediately exercisable. Each stock option was granted with an exercise price equal to the estimated fair value of our common stock on the grant date, as determined by our board of directors. Given the absence of an active market for our common stock, our board of directors determined the estimated fair value of our common stock on the date of grant based on several factors, including progress and milestones achieved in our business and sale of preferred stock. See "Management—Employee Benefit Plans" for more details regarding our stock option plans.

        With respect to the amounts disclosed in the column captioned "Potential Realizable Value at Assumed Annual Rates of Stock Price Appreciation for Option Term," the 5% and 10% assumed annual rates of compounded stock price appreciation are mandated by rules of the SEC, and do not represent our estimate or projection of our stock price performance. The potential realizable values at 5% and 10% appreciation are calculated by:

2004 Stock Option Values

        The following table provides information concerning the number and value of unexercised options held by our named executive officers as of December 31, 2004. Options to purchase 50,000 shares were exercised by our named executive officers in 2004. Amounts presented under the caption "Value of Unexercised In-the-Money Options at December 31, 2004" are based on an assumed initial public offering price of $            minus the exercise price, multiplied by the number of shares subject to the stock option, without taking into account any taxes that may be payable in connection with this transaction. Our 1998 Stock Option Plan and our 2001 Stock Option Plan allow for the early exercise of options granted. All options exercised early are subject to repurchase by us at the original exercise price. The repurchase right lapses over time.

 
  Number of Securities Underlying Unexercised Options at December 31, 2004
  Value of Unexercised
In-The-Money Options
at December 31, 2004

Name

  Exercisable
  Unexercisable
  Exercisable
  Unexercisable
Daniel N. Swisher, Jr.   1,140,000        
James A. Wells, Ph.D.   520,000        
Daniel C. Adelman, M.D.   330,000        
Daryl B. Winter, Ph.D., J.D.   270,000        
Eric H. Bjerkholt   325,000        

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Employment, Severance and Change of Control Agreements

        We have entered into employment agreements with each of our named executive officers and our Executive Chairman. These employment agreements include severance and change of control arrangements.

        In December 2003, we entered into an employment agreement with Daniel N. Swisher, Jr., our Chief Executive Officer and director. Under the agreement, Mr. Swisher is entitled to receive an initial base salary of $300,000, subject to increase by our board of directors, and may earn incentive bonuses of up to 40% of his base salary based on achievement of objectives mutually agreed upon by Mr. Swisher and our board of directors. Mr. Swisher was granted an option to purchase 300,000 shares of common stock at an exercise price of $0.60 per share.

        If Mr. Swisher is terminated without cause for any reason other than disability or there is an "effective termination," he will be entitled to receive as severance, 12 months of accelerated vesting of all his outstanding options, plus continued payment of his base salary for a period of 12 months. However, if Mr. Swisher obtains other full-time employment his continued salary payments will be reduced each month by the amount of such monthly base salary. Mr. Swisher will also be entitled to receive health benefits for up to 12 months following such termination. "Effective termination" includes, among other things, a significant reduction of duties, material reduction of base salary, significant reduction in benefits or relocation of more than 100 miles of our company's offices.

        Upon a change of control, any unvested portion of Mr. Swisher's stock options will be automatically accelerated in full and any right we possess to repurchase any unvested shares of common stock held by Mr. Swisher will lapse in full.

        In April 1998, we entered into an employment agreement with James A. Wells, Ph.D., our President and Chief Scientific Officer. Under the agreement, Dr. Wells was entitled to receive an initial base salary of $190,000, subject to increase by our board of directors, and received a $10,000 signing bonus. In the event Dr. Wells is terminated without cause, he will be entitled to receive 12 months accelerated vesting of his outstanding stock options and warrants.

        In December 2003, we entered into an employment agreement with Eric H. Bjerkholt, our Senior Vice President and Chief Financial Officer. We amended the agreement in June 2004. Under the agreement, Mr. Bjerkholt was entitled to receive an initial base salary of $240,000, subject to increase by our board of directors, and may earn incentive bonuses of up to 25% of his base salary based on achievement of corporate and personal objectives. Mr. Bjerkholt was granted two options, one to purchase 250,000 shares of common stock and one to purchase 75,000 shares of common stock, each at an exercise price equal to $0.60 per share. The option to purchase 75,000 shares will fully vest upon the occurrence of a financing event prior to July 5, 2005 in which we raise at least $20.0 million.

        If Mr. Bjerkholt is terminated without cause for any reason other than disability or there is an "effective termination," he will be entitled to receive as severance, accelerated vesting of his option to purchase 250,000 shares of common stock, plus continued payment of his base salary for a period of up to nine months. However, if Mr. Bjerkholt obtains other full-time employment his continued salary payments will be reduced each month by the amount of such monthly base salary. Mr. Bjerkholt will also be entitled to receive health benefits for up to nine months following such termination. In addition, upon a change of control, any unvested portion of Mr. Bjerkholt's option to purchase 250,000

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shares of common stock will automatically be accelerated in full and any right we possess to repurchase any unvested shares of common stock held by Mr. Bjerkholt will lapse in full.

        In April 2003, we entered into an employment agreement with Daniel C. Adelman, M.D., our Senior Vice President of Clinical Development. Under the agreement, Dr. Adelman was entitled to receive an initial base salary of $230,000, subject to increase by our board of directors. Dr. Adelman was granted an option to purchase 200,000 shares of common stock at an exercise price of $0.60 per share. If Dr. Adelman is terminated without cause for any reason other than disability or there is an "effective termination," he will be entitled to receive as severance, 12 months of accelerated vesting of all his outstanding options, plus continued payment of his base salary for a period of nine months. However, if Dr. Adelman obtains other full-time employment his continued salary payments will be reduced each month by the amount of such monthly base salary. Dr. Adelman will also be entitled to receive health benefits for up to 12 months following such termination. In addition, upon a change in control, any unvested portion of Dr. Adelman's option to purchase 200,000 shares of our common stock will be automatically accelerated in full and any right we possess to repurchase any unvested shares of common stock held by Dr. Adelman will lapse in full.

        In April 2000, we entered into an employment agreement with Daryl B. Winter, Ph.D., J.D., our Senior Vice President and General Counsel, which was amended in April 2003. Under the agreement, Dr. Winter was entitled to receive an initial base salary of $251,000, subject to increase by our board of directors, and may earn incentive bonuses based on achievement of objectives. Under prior agreements with us, Dr. Winter was granted an aggregate of 420,000 shares of common stock at an average price per share of $0.39. We have entered into two loans with Dr. Winter. See "Certain Relationships and Related Party Transactions" for a further description of the terms of these loans.

        If Dr. Winter is terminated without cause for any reason other than disability, he will be entitled to receive as severance, 12 months of accelerated vesting of all his outstanding options, plus continued payment of his base salary for a period of nine months. However, if Dr. Winter obtains other full-time employment his continued salary payments will be reduced each month by the amount of such monthly base salary. Dr. Winter will also be entitled to receive health benefits for up to nine months following such termination. If, following a change in control, Dr. Winter is terminated without cause or there is an "effective termination," any unvested portion of Dr. Winter's stock options will be automatically accelerated and any right we possess to repurchase any unvested shares of common stock held by Dr. Winter will lapse in full. "Effective termination" is defined as, in addition to the events specified above, any acts or omissions of the company, its affiliate(s) or any of their employees, agents or boards of directors that result in Dr. Winter being required to resign under the rules of attorney professional responsibility, failure by the company to comply with the provisions relating to his professional reporting responsibilities, or any other breach by us of any agreement between us and Dr. Winter.

        In addition, if Dr. Winter is still providing services to the acquirer on the one year anniversary of the change of control, any unvested portion of Dr. Winter's stock options will be automatically accelerated and any right we possess to repurchase any unvested shares held by Dr. Winter will lapse in full.

        In December 2003, we entered into an employment agreement with James W. Young, Ph.D., our Executive Chairman. Under the agreement, Dr. Young was entitled to receive an initial base salary of $200,000, subject to increase by our board of directors, and may earn incentive bonuses of up to 40%

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of his base salary, upon achievement of objectives mutually agreed upon by Dr. Young and our board of directors.

        In May 2000, we loaned $135,000 to Dr. Young pursuant to a full recourse promissory note to finance the purchase of common stock. The note is secured by shares of our common stock held by Dr. Young, and bears an interest rate of 6.6% per annum, compounded semi-annually. The note is not forgiveable, and the principal and accrued interest is due and payable upon the earlier of (i) 180 days after the date of termination of Dr. Young's status as an employee or consultant of our company or (ii) May 1, 2005.

        If Dr. Young is terminated without cause for any reason other than disability or if there is an "effective termination," he will be entitled to receive as severance, continued payment of his base salary and benefits pursuant to our benefit plans for a period of (i) nine months, if he is terminated at some time after the one year anniversary until up to the two year anniversary of the commencement of his employment as Executive Chairman, or (ii) six months, if he is terminated after the two year anniversary of the commencement of his employment as Executive Chairman. In each case, if Dr. Young obtains other full-time employment, his continued salary payments will be reduced each month by the amount of his monthly base salary at such other employment. Regardless of the timing of his termination, Dr. Young shall receive 12 months accelerated vesting of his stock options. Upon a change of control any unvested portion of Dr. Young's stock options will be automatically accelerated in full and any right we possess to repurchase any unvested shares of common stock held by Dr. Young will lapse in full.

Employee Benefit Plans

        Our 2005 Equity Incentive Award Plan, which we refer to as the 2005 Plan, is intended to serve as the successor equity incentive program to our 1998 Stock Option Plan and 2001 Stock Option Plan, which we refer to sometimes as the predecessor plans. Our 2005 Plan was adopted by our board of directors and stockholders in January 2005, and our 2005 Plan will become effective upon completion of this offering. Upon completion of this offering, all shares of stock remaining available for issuance and not subject to outstanding options under the predecessor plans will become part of the available pool of shares under our 2005 Plan, and no further option grants will be made under those predecessor plans. The options granted under the predecessor plans will continue to be governed by their existing terms, unless our compensation committee elects to extend one or more features of our 2005 Plan to those options. The 2005 Plan will terminate on the earlier of (i) 10 years after its adoption by our board of directors or by our stockholders, whichever adoption is earlier, or (ii) when the committee, with the approval of our board of directors, terminates the 2005 Plan.

        Share Reserve.     6,576,032 shares of common stock have been authorized for issuance under our 2005 Plan plus any options granted under our predecessor plans that expire unexercised or are repurchased by us pursuant to the terms of such options. The number of shares of common stock reserved for issuance under our 2005 Plan will automatically increase on the first trading day of each year, beginning in 2006, by an amount equal to the least of (i) 4.0% of our outstanding shares of common stock on such date, (ii) 4,000,000 shares or (iii) a lesser amount determined by our board of directors. The maximum aggregate number of shares that may be issued or transferred under the 2005 Plan during the term of the 2005 Plan shall be 42,000,000 shares. In addition, no participant in our 2005 Plan may be issued or transferred more than 1,000,000 shares of common stock pursuant to awards under the 2005 Plan per calendar year.

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        Equity Awards.     Our 2005 Plan will provide for the following types of awards:

        Eligibility.     The individuals eligible to participate in our 2005 Plan include our officers and other employees, our non-employee board members and any consultants we hire.

        Administration.     The 2005 Plan will be administered by the compensation committee. This committee will act as the plan administrator and will determine which eligible individuals are to receive

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awards under the 2005 Plan, the time or times when such awards are to be made, the number of shares subject to each such award, the status of any granted option as either an incentive stock option or a non-statutory stock option under the federal tax laws, the vesting schedule to be in effect for the award and the maximum term for which any award is to remain outstanding. The committee will also determine the exercise price of options granted, the purchase price for rights to purchase restricted stock and, if applicable, restricted units and the strike price for stock appreciation rights. The committee may also amend the terms of the 2005 Plan and outstanding equity awards. Amendments to the 2005 Plan are subject to stockholder approval to the extent required by law, rule or regulation.

        Plan Features.     Our 2005 Plan will include the following features:

        Under the 2005 Plan, our non-employee directors will receive annual, automatic, non-discretionary grants of nonqualified stock options.

        Each new non-employee director will receive an option to purchase 90,000 shares as of the date he or she first becomes a non-employee director. This option grant vests in equal annual installments over two years. In addition, on the date of each annual meeting, each individual who continues to serve as a non-employee director on such date will receive an automatic option grant to purchase an additional 30,000 shares of our common stock, commencing with our 2006 annual meeting of stockholders. This option grant vests in equal monthly installments over 12 months following the date of grant.

        The exercise price of each option granted to a non-employee director will be equal to 100% of the fair market value on the date of grant of the shares covered by the option. Options will have a maximum term of 10 years measured from the grant date, subject to termination in the event of the optionee's cessation of board service. The 2005 Plan provides that the optionee will have a 12-month period following a cessation of board service in which to exercise any outstanding vested options.

        Our Employee Stock Purchase Plan, which we refer to as our ESPP, was adopted by our board of directors and stockholders in January 2005. The ESPP will become effective immediately upon the signing of the underwriting agreement for this offering. The ESPP is designed to allow our eligible

79


employees and the eligible employees of our participating subsidiaries to purchase shares of common stock, at semi-annual intervals, with their accumulated payroll deductions.

        Share Reserve.     750,000 shares of our common stock will initially be reserved for issuance. The number of shares of common stock reserved under our ESPP will automatically increase on the first trading day each year, beginning in 2006, by an amount equal to the least of: (i) 0.5% of our outstanding shares of common stock outstanding on such date, (ii) 500,000 shares or (iii) a lesser amount determined by our board of directors. The maximum aggregate number of shares which may be issued over the term of the ESPP is 5,000,000 shares. In addition, no participant in our ESPP may be issued or transferred more than $25,000 of shares of common stock pursuant to awards under the ESPP per calendar year.

        Offering Periods.     The ESPP will have a series of successive overlapping offering periods, with a new offering period beginning on the first business day of December 1 and June 1 each year. Each offering period will have a duration of 12 months, unless otherwise determined by the compensation committee. However, the initial offering period may have a duration in excess of 12 months and will start on the date the underwriting agreement for this offering is signed and will end on the last business day in May 2006.

        Eligible Employees.     Individuals scheduled to work more than 20 hours per week for more than five calendar months per year may join an offering period on the start date of that period. However, employees may participate in only one offering period at a time.

        Payroll Deductions.     A participant may contribute up to 20% of his or her compensation through payroll deductions, and the accumulated deductions will be applied to the purchase of shares on each semi-annual purchase date. The purchase price per share will be equal to 85% of the fair market value per share on the start date of the offering period in which the participant is enrolled or, if lower, 85% of the fair market value per share on the semi-annual purchase date. Semi-annual purchase dates will occur on the last business day of May and November each year. However, a participant may not purchase more than 5,000 shares on any purchase date, and not more than 10,000 shares may be purchased in total by any participant during any offering period. Our compensation committee will have the authority to change these limitations for any subsequent offering period.

        Reset Feature.     If the fair market value per share of our common stock on any purchase date is less than the fair market value per share on the start date of the one-year offering period, then that offering period will automatically terminate, and a new one-year offering period will begin on the next business day. All participants in the terminated offering will be transferred to the new offering period.

        Change in Control.     Should we be acquired by merger or sale of substantially all of our assets or more than 50% of our voting securities, then all outstanding purchase rights may either be assumed by the acquirer and all outstanding purchase rights will be exercised at an early purchase date prior to the effective date of the acquisition. The purchase price in effect for each participant will be equal to 85% of the market value per share on the start date of the offering period in which the participant is enrolled at the time the acquisition occurs or, if lower, 85% of the fair market value per share on the purchase date prior to the acquisition.

        Plan Provisions.     The plan will terminate no later than 10 years after the date of its effectiveness. The board may at any time amend, suspend or discontinue the plan. However, certain amendments may require stockholder approval.

1998 Stock Option Plan and 2001 Stock Option Plan

        In 1998, we adopted the 1998 Stock Option Plan, or 1998 Plan, which authorizes the issuance of up to 10,341,350 shares of our common stock. In 2001, we adopted the 2001 Stock Option Plan, or

80



2001 Plan, which authorizes the issuance of up to 1,443,650 shares of our common stock. Under both the 1998 Plan and 2001 Plan, our board of directors is authorized to grant incentive stock options or non-statutory stock options to eligible employees, members of our board of directors and consultants, although incentive stock options may be granted only to employees. Under both plans, incentive stock options may be granted at an exercise price of not less than 100% of the fair market value of common stock on the date of grant. Under the 1998 Plan, non-statutory stock options may be granted at a price not less than 85% of the fair market value of the common stock. Under the 2001 Plan, non-statutory stock options may be granted at a price determined by our board of directors. Options generally become exercisable 25% on the first anniversary of the vesting commencement date and then 1/48th for each month thereafter so that all options are fully vested and exercisable after four years, and expire no later than ten years from the date of grant.

        The options currently outstanding under our 1998 Plan and 2001 Plan will terminate in the event we are acquired by merger or sale of substantially all our assets, unless those options are assumed by the acquiring entity or our repurchase rights with respect to any unvested shares subject to those options are assigned to such entity. However, a number of those options also contain a special acceleration provision pursuant to which the shares subject to those options will immediately vest upon an involuntary termination of the optionee's employment within 12 months following an acquisition in which the repurchase rights with respect to those shares are assigned to the acquiring entity. We do not intend to issue any future stock options under the 1998 Plan or 2001 Plan.

401(k) Plan

        We sponsor a 401(k) Plan that is a defined contribution plan intended to qualify under Section 401(a) of the Internal Revenue Code of 1986, as amended. All employees who are 18 years of age or older and have been employed by the company for at least 3 months are eligible to participate. Our 401(k) Plan is a discretionary contribution plan, whereby participants may voluntarily make pre-tax contributions to the 401(k) plan of up to 60% of their eligible earnings, up to the maximum statutory limit. Under the 401(k) Plan, each employee is fully vested in his or her deferred salary contributions. Employee contributions are held and invested by the 401(k) Plan's trustee. Each participant's contributions, and the corresponding investment earnings, are generally not taxable until withdrawn. Individual participants may direct the trustee to invest their accounts in authorized investment alternatives.

Limitations of Liability and Indemnification

        Our amended and restated certificate of incorporation and amended and restated bylaws provide that we will indemnify our directors and officers, and may indemnify our employees and other agents, to the fullest extent permitted by the Delaware General Corporation Law, which prohibits our amended and restated certificate of incorporation from limiting the liability of our directors for the following:

    any breach of the director's duty of loyalty to us or to our stockholders;

    acts or omissions not in good faith or that involve intentional misconduct or a knowing violation of law;

    unlawful payment of dividends or unlawful stock repurchases or redemptions; and

    any transaction from which the director derived an improper personal benefit.

        If Delaware law is amended to authorize corporate action further eliminating or limiting the personal liability of a director, then the liability of our directors will be eliminated or limited to the fullest extent permitted by Delaware law, as so amended. Our amended and restated certificate of incorporation does not eliminate a director's duty of care and, in appropriate circumstances, equitable

81



remedies, such as injunctive or other forms of non-monetary relief, remain available under Delaware law. This provision also does not affect a director's responsibilities under any other laws, such as the federal securities laws or other state or federal laws.

        Under our amended and restated bylaws, we are also empowered to enter into indemnification agreements with our directors and officers and to purchase insurance on behalf of any person whom we are required or permitted to indemnify. We have entered into indemnification agreements with our directors, executive officers and others. Under these agreements, we are required to indemnify them against expenses, judgments, fines and amounts paid in settlement (if such settlement is approved in advance by us), and in each case, to the extent actually and reasonably incurred in connection with any actual or threatened proceeding, if any of them may be made a party to such proceeding because he or she is or was one of our directors or officers. We are obligated to pay these amounts only if the officer or director acted in good faith and in a manner that he or she reasonably believed to be in, or not opposed to, our best interests. With respect to any criminal proceeding, we are obligated to pay these amounts only if the officer or director had no reasonable cause to believe that his or her conduct was unlawful. The indemnification agreements also set forth procedures that will apply in the event of a claim for indemnification thereunder. We believe that these bylaw provisions and indemnification agreements are necessary to attract and retain qualified persons as directors and officers. We also maintain directors' and officers' liability insurance.

        The limitation of liability and indemnification provisions in our amended and restated certificate of incorporation and amended and restated bylaws may discourage stockholders from bringing a lawsuit against directors for breach of their fiduciary duties. They may also reduce the likelihood of derivative litigation against directors and officers, even though an action, if successful, might benefit us and our stockholders. A stockholder's investment may be harmed to the extent we pay the costs of settlement and damage awards against directors and officers pursuant to these indemnification provisions.

        Insofar as indemnification for liabilities arising under the Securities Act of 1933, as amended, or the Securities Act, may be permitted to our directors, officers and controlling persons pursuant to the foregoing provisions, or otherwise, we have been advised that, in the opinion of the SEC, such indemnification is against public policy as expressed in the Securities Act, and is, therefore, unenforceable.

        There is no pending litigation or proceeding naming any of our directors or officers as to which indemnification is being sought, nor are we aware of any pending or threatened litigation that may result in claims for indemnification by any director or officer.

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CERTAIN RELATIONSHIPS AND RELATED PARTY TRANSACTIONS

        From January 1, 2002 to the date of this prospectus, we have entered into the following transactions with our executive officers, directors and holders of more than 5% of our securities.

Sale of Series C-1 and C-2 Preferred Stock

        On December 18, 2002, we sold 1,250,000 shares of Series C-1 preferred stock to Biogen Idec at a price of $4.80 per share, for gross proceeds of $6.0 million in connection with the collaboration we entered into with Biogen Idec on that same date. On August 30, 2004, we sold 2,916,667 shares of Series C-2 preferred stock to Biogen Idec at a price of $4.80 per share, for gross proceeds of $14.0 million in connection with the collaboration we entered into with Biogen Idec on August 25, 2004. See "Business—Strategic Collaborations."

Investor Rights Agreement

        We and the holders of our preferred stock and a warrant holder have entered into an agreement, pursuant to which these stockholders and the warrant holder will have registration rights with respect to their shares of common stock following this offering. See "Description of Capital Stock—Registration Rights" for a further description of the terms of this agreement.

Employment Agreements

        We have entered into employment agreements with our executive officers. See "Management—Employment, Severance and Change of Control Agreements."

Indemnification of Directors and Officers

        Our amended and restated certificate of incorporation and amended and restated bylaws provide that we will indemnify each of our directors and officers to the fullest extent permitted by the Delaware General Corporation Law. Furthermore, we have entered into indemnification agreements with each of our directors and officers. For further information, see "Management—Limitations of Liability and Indemnification."

Loans to Officers

        Our officers have the following loans outstanding with us:

Officer

  Date of Loan
  Principal Amount
  Interest Rate
  Largest Outstanding Balance During 2004
  Outstanding Balance as of December 31,
2004

  Outstanding Balance as of Date of this Prospectus
James W. Young Ph.D.   May 17, 2000   $ 135,000 (1)   6.6 % $ 135,000   $ 135,000   $ 135,000
Daryl B. Winter Ph.D., J.D.   April 13, 2000     90,000 (2)   6.6     90,000        
    April 13, 2000     100,000 (3)   6.6     100,000     100,000     100,000

(1)
This loan is evidenced by a full recourse promissory note and was used to purchase 450,000 shares of our common stock pursuant to an option grant.

(2)
This loan is evidenced by full recourse promissory note and was used to purchase 300,000 shares of our common stock pursuant to an option grant. This note was forgiven in full in April 2004.

(3)
This loan is evidenced by a full recourse promissory note and was used, in part, to purchase a home. The loan is secured by shares of our common stock and has a five year term expiring in April 2005. Principal and accrued interest are forgiven under the loan upon the earlier to occur of (i) the termination of Dr. Winter's employment (on a pro rata basis based on the term of employment) and (ii) the five year anniversary of his employment.

        Under applicable law, we cannot extend the term or otherwise modify these notes.

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Voting Arrangement

        We have entered into an Investor Rights Agreement with a warrant holder and certain holders of our preferred stock. See "Management—Voting Arrangement."

Biogen Idec

        In December 2002, we issued a promissory note to Biogen Idec for up to $4.0 million in connection with a research collaboration agreement with Biogen Idec. Under the promissory note, we may drawdown up to $4.0 million, from time to time, over a period of ten calendar quarters beginning on April 1, 2003 and ending on June 30, 2005. The principal and accrued interest of each draw will be due five years from the date of advance of each draw and bear interest at 3% above LIBOR to be paid quarterly. As of December 31, 2004, we had drawn $3.2 million and $800,000 remained available for future draws. We may use a portion of the proceeds of this offering to repay all of our outstanding indebtedness to Biogen Idec.

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PRINCIPAL STOCKHOLDERS

        The following table sets forth, as of December 31, 2004, information regarding beneficial ownership of our capital stock by:


        Beneficial ownership is determined according to the rules of the SEC and generally means that a person has beneficial ownership of a security if he, she or it possesses sole or shared voting or investment power of that security, and includes options and warrants that are currently exercisable or exercisable within 60 days. Except as indicated by footnote, and subject to community property laws where applicable, we believe the persons named in the table have sole voting and investment power with respect to all shares of common stock shown as beneficially owned by them.

        This table lists applicable percentage ownership based on 40,742,313 shares of common stock outstanding as of December 31, 2004, after giving effect to the conversion of our outstanding preferred stock into common stock in connection with this offering, and based on             shares of common stock outstanding upon completion of this offering.

        Shares of common stock subject to stock options and warrants currently exercisable or exercisable within 60 days of December 31, 2004 are deemed to be outstanding for computing the percentage ownership of the person holding these options and warrants and the percentage ownership of any group of which the holder is a member, but are not deemed outstanding for computing the percentage of any other person.

        Unless otherwise indicated, the address for each of the stockholders in the table below is c/o Sunesis Pharmaceuticals, Inc., 341 Oyster Point Boulevard, South San Francisco, California 94080.

 
  Beneficial Ownership
   
   
 
 
  Percentage of Shares
Outstanding

 
 
   
  Shares Subject to Right of Repurchase Within 60 Days of December 31, 2004 (3)
  Options and Warrants Exercisable Within 60 Days
 
Name of Beneficial Owner

  Shares Beneficially Owned (1)(2)
  Before the Offering
  After the Offering (2)
 
5% Stockholders:                      
  Abingworth BioVentures II SICAV (4)   3,311,859       8.1 %    
  Biogen Idec (5)   4,166,667         10.2      
  Entities affiliated with Credit Suisse First Boston (6)   6,458,333       15.9      
  Entities affiliated with Mayfield Associates (7)   4,878,846       12.0      
  Entities affiliated with Venrock Associates (8)   3,993,910       9.8      
  Entities affiliated with Warburg Pincus (9)   6,732,540       16.5      
                       

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Executive Officers and Directors:                      
  James W. Young, Ph.D. (10)   1,450,000   354,167   400,000   3.5      
  Daniel N. Swisher, Jr.   1,190,000   527,503   1,140,000   2.8      
  James A. Wells, Ph.D.   1,995,000   196,667   620,000   4.8      
  Eric H. Bjerkholt (11)   325,000   182,291   325,000   *      
  Daniel C. Adelman, M.D.   330,000   227,917   330,000   *      
  Daryl B. Winter, Ph.D.   570,000   195,000   270,000   1.4      
  Anthony B. Evnin, Ph.D. (8)   3,993,910       9.8      
  Stephen P.A. Fodor, Ph.D.   100,000   2,084   100,000   *      
  Steven D. Goldby   100,000     100,000   *      
  Russell C. Hirsch, M.D., Ph.D. (7)         *      
  Jonathan S. Leff (9)   6,732,560       16.5      
  All executive officers and directors as a group (11 persons)   16,786,470   1,685,629   3,185,000   38.1      

*
Represents beneficial ownership of less than one percent (1%) of the outstanding shares of our common stock.

(1)
Includes shares of common stock subject to a right of repurchase within 60 days of December 31, 2004 and shares issuable pursuant to stock options and warrants exercisable within 60 days of December 31, 2004.

(2)
Upon completion of this offering, our existing stockholders will own             shares, representing    %, of our outstanding common stock. Changes in our valuation in connection with this offering will impact the relative ownership of our common stock upon completion of this offering among our existing stockholders. For purposes of this table, we have assumed an initial public offering price of $            per share, but the relative number of shares of common stock owned and the percentage ownership among our existing stockholders will change if our initial public offering price is other than $            per share. See "Conversion of Preferred Stock and Reverse Stock Split."

(3)
Represents shares of common stock subject to a right of repurchase, at the original option exercise price, in the event the holder ceases to provide services to us. The option exercise prices range from $0.30 to $0.60.

(4)
Abingworth Bioventures II SICAV (in liquidation) is a Luxembourg registered investment company. William Knight, Paul Meyers, Karl U. Sanne, Jean Welter and Genevieve Blauen are the members of the Board of Liquidators, which has powers equivalent to a company's board of directors. These individuals may be deemed to share dispositive and voting power over the shares which are, or may be, deemed to be beneficially owned by Abingworth Bioventures II SICAV (in liquidation). Each of these individuals disclaims beneficial ownership of such shares, except to the extent of his or her pecuniary interest therein.

(5)
Biogen Idec MA, Inc., a Massachusetts corporation, is a wholly-owned subsidiary of Biogen Idec Inc., a Delaware corporation that is publicly traded on the Nasdaq National Market. James C. Mullen, William H. Rastetter, Thomas J. Bucknum, Peter N. Kellogg, James C. Mullen, Michael F. Phelps and Thomas J. Bucknum are the directors and executive officers of Biogen Idec MA, Inc. These individuals may be deemed to share dispositive and voting power over the shares which are, or may be, deemed to be beneficially owned by Biogen Idec MA, Inc. Each of these individuals

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(6)
Includes (i) 333,250 shares held by Credit Suisse First Boston EMA Partners Fund 2000, L.P., (ii) 441,750 shares held by Credit Suisse First Boston EMA Private Equity Fund 2000, L.P., (iii) 1,240,646 shares held by Credit Suisse First Boston Equity Partners (Bermuda), L.P., (iv) 4,438,396 shares held by Credit Suisse First Boston Equity Partners, L.P. and (v) 4,291 shares held by Credit Suisse First Boston U.S. Executive Advisors, L.P. An affiliate of Credit Suisse Group, of which Credit Suisse First Boston LLC is an indirect wholly-owned subsidiary, is either the general partner, managing general partner or investment manager of each of those entities. Credit Suisse Group and Credit Suisse First Boston LLC each disclaims beneficial ownership of the shares owned by such investment partnerships to the extent attributable to partnership interests therein held by persons other than Credit Suisse Group and its affiliates. The address of Credit Suisse First Boston and its affiliates is Eleventh Madison Avenue, New York, New York 10010.

(7)
Includes (i) 243,943 shares held by Mayfield Associates Fund III, L.P. and (ii) 4,634,903 shares held by Mayfield IX, L.P. A. Grant Heidrick, III, William D. Unger, Wendell G. Van Auken, III, Kevin A. Fong, Yogen K. Dalal and F. Gibson Myers, Jr. are the Managing Directors of Mayfield VIII Management L.L.C., which is the General Partner of Mayfield Associates Fund III, L.P., and also are the Managing Directors of Mayfield IX Management L.L.C., which is the General Partner of Mayfield IX, L.P. These individuals may be deemed to share dispositive and voting power over the shares, which are, or may be, deemed to be beneficially owned by Mayfield Associates Fund III, L.P. and Mayfield IX, L.P. Each of these individuals disclaim beneficial ownership of such shares, except to the extent of his or her pecuniary interest therein. Dr. Hirsch, one of our directors, served as a Venture Partner from 1993 to 1994 and a General Partner from 1995 to 2000 of Mayfield Fund and is now a Managing Partner of Prospect Management Co. II, LLC. Dr. Hirsch disclaims beneficial ownership of such shares, except to the extent of his pecuniary interest therein. The address of Mayfield Fund and its affiliates is 2800 Sand Hill Road, Menlo Park, California 94025.

(8)
Includes (i) 1,661,038 shares held by Venrock Associates, (ii) 2,265,885 shares held by Venrock Associates II, L.P. and (iii) 66,987 shares held by Venrock Entrepreneur's Fund, L.P. Anthony B. Evnin, Michael C. Brooks, Eric S. Copeland, Bryan E. Roberts, Ray A. Rothrock, Michael F. Tyrrell and Anthony Sun are the general partners of Venrock Associates and Venrock Associates II, L.P. These individuals may be deemed to share dispositive and voting power over the shares which are, or may be, deemed to be beneficially owned by Venrock Associates and Venrock Associates II, L.P. Each of these individuals disclaims beneficial ownership of these shares, except to the extent of his or her pecuniary interest therein. The general partner of Venrock Entrepreneurs Fund, L.P. is Venrock Management LLC. Anthony B. Evnin, Michael C. Brooks, Eric S. Copeland, Bryan E. Roberts, Ray A. Rothrock, Michael F. Tyrrell and Anthony Sun are the members of Venrock Management LLC. These individuals may be deemed to share dispositive and voting power over the shares which are, or may be, deemed to be beneficially owned by Venrock Entrepreneurs Fund, L.P. Each of these individuals disclaims beneficial ownership of these shares, except to the extent of his or her pecuniary interest therein. The address of Venrock Associates and its affiliates is 30 Rockefeller Plaza, Room 5508, New York, New York 10112.

(9)
Includes (i) 6,635,135 shares held by Warburg, Pincus Equity Partners, L.P., (ii) 53,130 shares held by Warburg, Pincus Netherlands Equity Partners I, C.V., (iii) 35,420 shares held by Warburg, Pincus Netherlands Equity Partners II, C.V., (iv) 8,855 shares held by Warburg, Pincus Netherlands Equity Partners III, C.V. and (v) 20 shares held by family members. Mr. Leff, one of our directors, is a General Partner of Warburg, Pincus & Co. and a Managing Director and Member of Warburg Pincus LLC. Mr. Leff may be deemed to have an indirect pecuniary interest in an indeterminate portion of the shares held by the Warburg Pincus entities. Mr. Leff disclaims beneficial ownership

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(10)
Includes 85,000 shares held by family members. Dr. Young disclaims beneficial ownership of such shares, except to the extent of his pecuniary interest therein.

(11)
A total of 75,000 shares underlying Mr. Bjerkholt's option is subject to accelerated vesting upon the occurrence of a financing event in which we raise at least $20.0 million, if such event is completed by July 5, 2005. The beneficial ownership calculation assumes vesting and exercisability of these shares.

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DESCRIPTION OF CAPITAL STOCK

        The following information describes our common stock and preferred stock, as well as options to purchase our common stock and provisions of our amended and restated certificate of incorporation and amended and restated bylaws to be effective upon completion of this offering. This description is only a summary and does not purport to be complete. You should also refer to our amended and restated certificate of incorporation and amended and restated bylaws which have been filed with the SEC as exhibits to our registration statement, of which this prospectus forms a part.

        Upon the completion of this offering, we will be authorized to issue up to 105,000,000 shares of capital stock, $0.0001 par value, divided into two classes designated common stock and preferred stock. Of our authorized shares, 100,000,000 shares will be designated as common stock and 5,000,000 shares will be designated as preferred stock.

Common Stock

        As of December 31, 2004, there were 5,917,375 shares of common stock outstanding that were held of record by 206 stockholders. After giving effect to the sale of common stock in this offering, there will be            shares of common stock outstanding. As of December 31, 2004, there were outstanding options to purchase a total of 7,140,666 shares of our common stock under our 1998 Plan and 2001 Plan.

        The holders of common stock are entitled to one vote for each share held of record on all matters submitted to a vote of the stockholders. Our stockholders do not have cumulative voting rights in the election of directors. Accordingly, holders of a majority of the shares voting are able to elect all of our directors. Subject to preferences that may be granted to any then outstanding preferred stock, holders of common stock are entitled to receive ratably only those dividends as may be declared by the board of directors out of funds legally available therefore. In the event of our liquidation, dissolution or winding up, holders of common stock are entitled to share ratably in all of our assets remaining after we pay our liabilities and distribute the liquidation preference of any then outstanding preferred stock. Holders of common stock have no preemptive or other subscription or conversion rights. There are no redemption or sinking fund provisions applicable to the common stock. The shares of our common stock to be issued upon the closing of this offering will be fully paid and non-assessable.

Preferred Stock

        Upon the completion of this offering, our board of directors will have the authority, without further action by our stockholders, to issue up to 5,000,000 shares of preferred stock in one or more series and to fix the rights, preferences, privileges and restrictions thereof. These rights, preferences and privileges could include dividend rights, conversion rights, voting rights, terms of redemption, liquidation preferences, sinking fund terms and the number of shares constituting any series or the designation of such series, any or all of which may be greater than the rights of common stock. The issuance of our preferred stock could adversely affect the voting power of holders of common stock and the likelihood that such holders will receive dividend payments and payments upon liquidation. In addition, the issuance of preferred stock could have the effect of delaying, deferring or preventing a change in our control or other corporate action. Upon completion of this offering, no shares of preferred stock will be outstanding, and we have no present plan to issue any shares of preferred stock.

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Warrants

        As of December 31, 2004, we had outstanding warrants to purchase the following amounts of shares:

 
  Shares
  Exercise Price
  Expiration
 
Series A Preferred Stock   48,743   $ 1.00   August 2005  
Common Stock   130,000   $ 1.00   April 2008  
Series B Preferred Stock   71,538   $ 2.60   December 2009  
Common Stock   175,000   $ 4.00   May 2010  
Series C Preferred Stock   486,750   $ 4.80   July 2010  
Series C Preferred Stock   3,000   $ 4.80   June 2013 (1)
Series C Preferred Stock   1,435   $ 4.80   June 2014 (2)

(1)
The expiration date of the warrant is the earlier of 36 months after our initial public offering or June 2013.

(2)
The expiration date of the warrant is the earlier of 36 months after our initial public offering or June 2014.

Registration Rights

        After the closing of this offering, the holders of approximately 35,562,661 shares of our common stock, including 737,723 shares issuable upon exercise of outstanding warrants, will be entitled to certain rights with respect to the registration of such shares under the Securities Act. In the event that we propose to register any of our securities under the Securities Act, either for our own account or for the account of other securityholders, other than for our initial public offering, these holders are entitled to notice of such registration and are entitled to include their common stock in such registration, subject to certain marketing and other limitations. Beginning six months after the closing of this offering, the holders of at least 50% of these securities have the right to require us, on not more than two occasions, to file a registration statement on Form S-1 under the Securities Act in order to register the resale of their shares of common stock. We may, in certain circumstances, defer such registrations and the underwriters have the right, subject to certain limitations, to limit the number of shares included in such registrations. Further, these holders may require us to register the resale of all or a portion of their shares on Form S-3, subject to certain conditions and limitations. In addition, these holders have certain "piggyback" registration rights. If we propose to register any of our equity securities under the Securities Act other than pursuant to the registration rights noted above or specified excluded registrations, holders may require us to include all or a portion of their registrable securities in the registration and in any related underwriting. In an underwritten offering, the managing underwriter, if any, has the right, subject to specified conditions, to limit the number of registrable securities such holders may include. Additionally, such piggyback registrations are subject to delay or termination of the registration under certain circumstances.

Anti-Takeover Effects of Provisions of the Amended and Restated Certificate of Incorporation and Amended and Restated Bylaws

        Our amended and restated certificate of incorporation will provide for our board of directors to be divided into three classes, with staggered three-year terms. Only one class of directors will be elected at each annual meeting of our stockholders, with the other classes continuing for the remainder of their respective three-year terms. Because our stockholders do not have cumulative voting rights, our stockholders holding a majority of the shares of common stock outstanding will be able to elect all of our directors. Our amended and restated certificate of incorporation and amended and restated bylaws will provide that all stockholder action must be effected at a duly called meeting of stockholders and

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not by a consent in writing, and that only our board of directors, chairman of the board, chief executive officer, or president (in the absence of a chief executive officer) or holder of greater than 10% of our common stock may call a special meeting of stockholders. Our amended and restated certificate of incorporation will require a 66 2 / 3 % stockholder vote for the amendment, repeal or modification of certain provisions of our amended and restated certificate of incorporation and amended and restated bylaws relating to the absence of cumulative voting, the classification of our board of directors, the requirement that stockholder actions be effected at a duly called meeting, and the designated parties entitled to call a special meeting of the stockholders.

        The combination of the classification of our board of directors, the lack of cumulative voting and the 66 2 / 3 % stockholder voting requirements will make it more difficult for our existing stockholders to replace our board of directors as well as for another party to obtain control of us by replacing our board of directors. Since our board of directors has the power to retain and discharge our officers, these provisions could also make it more difficult for existing stockholders or another party to effect a change in management. In addition, the authorization of undesignated preferred stock makes it possible for our board of directors to issue preferred stock with voting or other rights or preferences that could impede the success of any attempt to change our control.

        These provisions may have the effect of deterring hostile takeovers or delaying changes in our control or management. These provisions are intended to enhance the likelihood of continued stability in the composition of our board of directors and its policies and to discourage certain types of transactions that may involve an actual or threatened change in control. These provisions are designed to reduce our vulnerability to an unsolicited acquisition proposal. The provisions also are intended to discourage certain tactics that may be used in proxy fights. However, such provisions could have the effect of discouraging others from making tender offers for our shares and, as a consequence, they also may inhibit fluctuations in the market price of our shares that could result from actual or rumored takeover attempts. Such provisions may also have the effect of preventing changes in our management.

Section 203 of the Delaware General Corporation Law

        We are subject to Section 203 of the Delaware General Corporation Law, which prohibits a Delaware corporation from engaging in any business combination with any interested stockholder for a period of three years after the date that such stockholder became an interested stockholder, with the following exceptions:

        In general, Section 203 defines business combination to include the following:

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        In general, Section 203 defines an "interested stockholder" as an entity or person who, together with the person's affiliates and associates, beneficially owns, or within three years prior to the time of determination of interested stockholder status did own, 15% or more of the outstanding voting stock of the corporation.

Transfer Agent and Registrar

        The transfer agent and registrar for our common stock is Mellon Investor Services LLC.

Nasdaq National Market Listing

        We have applied to have our stock approved for quotation on the Nasdaq National Market under the symbol "SNSS."

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U.S. FEDERAL INCOME TAX CONSEQUENCES TO NON-U.S. HOLDERS

        The following is a general discussion of certain material U.S. federal income and estate tax consequences of the ownership and disposition of our common stock by a beneficial owner thereof that is a "Non-U.S. Holder." A "Non-U.S. Holder" is a person or entity that, for U.S. federal income tax purposes, is a non-resident alien individual, a foreign corporation or a foreign estate or trust. The test for whether an individual is a resident of the U.S. for federal estate tax purposes differs from the test used for federal income tax purposes.

        This discussion is based on the U.S. Internal Revenue Code of 1986, as amended, judicial decisions and administrative regulations and interpretations in effect as of the date of this prospectus, all of which are subject to change, including changes with retroactive effect. This discussion does not address all aspects of U.S. federal income and estate taxation that may be relevant to Non-U.S. Holders in light of their particular circumstances (including, without limitation, Non-U.S. Holders who are "controlled foreign corporations," "passive foreign investment companies," U.S. expatriates, pass-through entities or who hold their common stock through pass-through entities) and does not address any tax consequences arising under the laws of any state, local or non-U.S. jurisdiction. Prospective holders should consult their tax advisors with respect to the federal income and estate tax consequences of holding and disposing of our common stock in light of their particular situations and any consequences to them arising under the laws of any state, local or non-U.S. jurisdiction.

Dividends

        Subject to the discussion below, distributions, if any, made to a Non-U.S. Holder of our common stock out of our current or accumulated earnings and profits generally will constitute dividends for U.S. tax purposes and will be subject to withholding tax at a 30% rate or such lower rate as may be specified by an applicable income tax treaty. To obtain a reduced rate of withholding under a treaty, a Non-U.S. Holder generally will be required to provide us with a properly-executed IRS Form W-8BEN certifying the Non-U.S. Holder's entitlement to benefits under that treaty. Treasury Regulations and the applicable treaty provide rules to determine whether, for purposes of determining the applicability of a tax treaty, dividends paid to a Non-U.S. Holder that is an entity should be treated as paid to the entity or to those holding an interest in that entity. To the extent distributions exceed our current and accumulated earnings and profits, they will constitute a return of capital and will first reduce the Non-U.S. Holder's basis in our common stock, but not below zero, and then will be treated as gain from the sale of stock.

        There will be no withholding tax on dividends paid to a Non-U.S. Holder that are effectively connected with the Non-U.S. Holder's conduct of a trade or business within the United States if a properly-executed IRS Form W-8ECI, stating that the dividends are so connected, is provided to us. Instead, the effectively connected dividends will be subject to regular U.S. income tax, generally in the same manner as if the Non-U.S. Holder were a U.S. citizen or resident alien or a domestic corporation, as the case may be, unless a specific treaty exemption applies. A corporate Non-U.S. Holder receiving effectively connected dividends may also be subject to an additional "branch profits tax," which is imposed, under certain circumstances, at a rate of 30% (or such lower rate as may be specified by an applicable treaty) on the corporate Non-U.S. Holder's effectively connected earnings and profits, subject to certain adjustments. If you are eligible for a reduced rate of withholding tax pursuant to a tax treaty, you may obtain a refund of any excess amounts currently withheld if you file an appropriate claim for refund with the U.S. Internal Revenue Service.

Gain on Disposition of Common Stock

        A Non-U.S. Holder generally will not be subject to U.S. federal income tax with respect to gain realized on a sale or other disposition of our common stock unless (i) the gain is effectively connected

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with a trade or business of such holder in the United States or, if a treaty applies, is attributable to a permanent establishment of the Non-U.S. Holder in the U.S., (ii) in the case of Non-U.S. Holders who are nonresident alien individuals and hold our common stock as a capital asset, such individuals are present in the United States for 183 or more days in the taxable year of the disposition and certain other conditions are met, or (iii) our common stock constitutes a U.S. real property interest by reason of our status as a "United States real property holding corporation" ("USRPHC") for U.S. federal income tax purposes at any time during the shorter of the period during which you hold our common stock or the five-year period ending on the date on which you dispose of shares of our common stock and, if our common stock is treated as regularly traded on an established securities market (within the meaning of applicable Treasury regulations), you held, directly or indirectly, at any time within the five-year period preceding the disposition, more than 5% of our common stock.

        If you are a Non-U.S. Holder described in (i) above, you will be required to pay tax on the net gain derived from the sale at regular graduated U.S. federal income tax rates, and corporate Non-U.S. Holders described in (i) above may be subject to the branch profits tax at a 30% rate or such lower rate as may be specified by an applicable income tax treaty. If you are an individual Non-U.S. Holder described in (ii) above, you will be required to pay a flat 30% tax on the gain derived from the sale, which tax may be offset by U.S. source capital losses (even though you are not considered a resident of the United States).

        The determination of whether we are a USRPHC depends on the fair market value of our U.S. real property interests relative to the fair market value of our interests in real property located outside the U.S. and the fair market value of our other business assets. While we believe that we are not a USRPHC, there can be no assurances that we are not a USRPHC. Even if we are not a USRPHC at the present time, since the determination of USRPHC status in the future will be based upon the composition of our assets from time to time, there can be no assurances that we will not become a USRPHC in the future. However, as indicated above, so long as our common stock is treated as "regularly traded" on an established securities market (within the meaning of applicable Treasury regulations), our common stock will not be treated as a U.S. real property interest unless you hold, directly or indirectly, at any time with the five-year period preceding your disposition, more than 5% of our common stock. If any gain on your disposition is taxable because we are a USRPHC and your ownership of our common stock exceeds 5%, you will be taxed on such disposition generally in the manner applicable to U.S. persons and in addition, the purchaser of your common stock may be required to withhold a tax equal to 10% of the amount realized on the sale. You should consult your tax advisor regarding the application of the USRPHC rules discussed above to a disposition by you of our common stock.

Information Reporting Requirements and Backup Withholding

        Generally, we must report to the U.S. Internal Revenue Service the amount of dividends paid, the name and address of the recipient, and the amount, if any, of tax withheld. A similar report is sent to the holder. Pursuant to tax treaties or certain other agreements, the U.S. Internal Revenue Service may make its reports available to tax authorities in the recipient's country of residence.

        Backup withholding will generally not apply to payments of dividends made by us or our paying agents to a Non-U.S. Holder if the holder has provided its federal taxpayer identification number, if any, or the required certification that it is not a U.S. person (which is generally provided by furnishing a properly-executed IRS Form W-8BEN), unless the payer otherwise has knowledge or reason to know that the payee is a U.S. person.

        Under current U.S. federal income tax law, information reporting and backup withholding will apply to the proceeds of a disposition of our common stock effected by or through a U.S. office of a broker unless the disposing holder certifies as to its non-U.S. status or otherwise establishes an

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exemption. Generally, U.S. information reporting and backup withholding will not apply to a payment of disposition proceeds where the transaction is effected outside the United States through a non-U.S. office of a non-U.S. broker. However, unless the Non-U.S. Holder is entitled to an exemption, U.S. information reporting requirements (but not backup withholding) will apply to a payment of disposition proceeds where the transaction is effected outside the United States by or through an office outside the United States of a broker that fails to maintain documentary evidence that the holder is a Non-U.S. Holder and that certain conditions are met and the broker is (i) a U.S. person, (ii) a foreign person which derived 50% or more of its gross income for certain periods from the conduct of a trade or business in the United States, (iii) a "controlled foreign corporation" for U.S. federal income tax purposes, or (iv) a foreign partnership (a) at least 50% of the capital or profits interest in which is owned by U.S. persons, or (b) that is engaged in a U.S. trade or business. Backup withholding may apply to a payment of disposition proceeds if the broker has actual knowledge that the holder is a U.S. person.

        Backup withholding is not an additional tax. Rather, the tax liability of persons subject to backup withholding will be reduced by the amount of tax withheld. If withholding results in an overpayment of taxes, a refund may be obtained, provided that the required information is furnished to the U.S. Internal Revenue Service.

Federal Estate Tax

        An individual who at the time of death is not a citizen or resident of the United States and who is treated as the owner of, or has made certain lifetime transfers of, an interest in our common stock will be required to include the value thereof in his gross estate for U.S. federal estate tax purposes, and may be subject to U.S. federal estate tax unless an applicable estate tax treaty provides otherwise.

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SHARES ELIGIBLE FOR FUTURE SALE

        Prior to this offering, no public market existed for our common stock. Market sales of shares of our common stock after this offering and from time to time, and the availability of shares for future sale, may reduce the market price of our common stock. Sales of substantial amounts of our common stock, or the perception that these sales could occur, could harm prevailing market prices for our common stock and could impair our future ability to obtain capital, especially through an offering of equity securities.

        Based on 40,742,313 shares outstanding on December 31, 2004, we will have            shares of common stock outstanding upon completion of this offering, assuming no outstanding options or warrants are exercised prior to the closing of this offering. Of those shares, the            shares of common stock sold in the offering will be freely transferable without restriction, unless purchased by persons deemed to be our "affiliates" as that term is defined in Rule 144 under the Securities Act. Any shares purchased by an affiliate may not be resold except pursuant to an effective registration statement or an applicable exemption from registration, including an exemption under Rule 144 promulgated under the Securities Act. The remaining            shares of common stock to be outstanding immediately following the completion of this offering are "restricted," which means they were originally sold in offerings that were not registered under the Securities Act. These restricted shares may only be sold through registration under the Securities Act or under an available exemption from registration, such as provided through Rule 144, 144(k) or Rule 701.

        Taking into account the lock-up agreements described below, the number of shares that will be available for sale in the public market under the provisions of Rule 144, 144(k) and 701 will be as follows:

Days After the Effective Date

  Number of Shares Eligible
for Sale in the U.S. Public
Market/Percent of Outstanding Stock

  Comment
Upon effectiveness       Shares sold by us in this offering
At various times after 180 days       Shares eligible for sale under Rules 144, 144(k) and 701

        Additionally, of the 7,140,666 shares issuable upon exercise of options to purchase our common stock outstanding as of December 31, 2004, approximately 3,010,773 shares were vested and will be eligible for sale pursuant to Rule 701 180 days after the effective date of this offering.

Rule 144

        In general, under Rule 144, a person (or persons whose shares are aggregated), including an affiliate, who has beneficially owned shares of our common stock for one year or more, including the holding period of any prior owner other than one of our affiliates, is entitled to sell a number of restricted shares within any three-month period a number of shares that does not exceed the greater of:


        Sales of restricted shares under Rule 144 are also subject to requirements on the manner of sale, notice and the availability of our current public information. Rule 144 also provides that affiliates that sell shares of our common stock that are not restricted shares must nonetheless comply with the same restrictions applicable to restricted shares, other than the holding period requirement.

96


Rule 144(k)

        Under Rule 144(k), a person (or persons whose shares are aggregated) who is deemed not to have been our affiliate at any time during the 90 days preceding a sale and who has beneficially owned the shares proposed to be sold for at least two years, including the holding period of any prior owner other than one of our affiliates, is entitled to sell a number of restricted shares under Rule 144(k) without complying with the volume limitations, manner of sale provisions, notice requirements or the provisions relating to the availability of current public information.

Rule 701

        Under Rule 701, shares of our common stock acquired upon the exercise of currently outstanding options or pursuant to other rights granted under our stock plans may be resold, beginning 90 days after the date of this prospectus, to the extent not subject to lock-up agreements, by:

        As of December 31, 2004, options to purchase a total of 7,140,666 shares of common stock were outstanding, of which approximately 3,010,773 were vested. Of the total number of shares of our common stock issuable under these options, all are subject to contractual lock-up agreements with us or the underwriters.

Form S-8 Registration Statements

        Upon completion of this offering, we intend to file one or more registration statements on Form S-8 under the Securities Act to register shares of common stock reserved for issuance under our 1998 Plan, 2001 Plan, 2005 Plan and ESPP, thus permitting the resale of such shares by non-affiliates in the public market without restriction under the Securities Act. Such registration statement will become effective immediately upon filing.

Lock-up Agreements

        Each of our executive officers and directors and substantially all of our stockholders entered into lock-up agreements pursuant to which they have agreed, subject to limited exceptions, not to offer, sell, or otherwise transfer or dispose of, directly or indirectly, any shares of common stock or securities convertible into or exchangeable or exercisable for shares of common stock for a period of 180 days from the date of this prospectus without the prior written consent of Lehman Brothers Inc. and SG Cowen & Co., LLC. The lock-up agreements permit transfers of shares of our common stock subject to certain restrictions, transfers of shares as a gift to trusts or immediate family members or to certain entities or persons affiliated with the stockholder. Lehman Brothers Inc. and SG Cowen & Co., LLC may, in their joint discretion, at any time and without notice, release for sale in the public market all or any portion of the shares subject to the lock-up agreements. All of the shares that are not subject to the underwriters' lock-up agreements are subject to similar contractual lock-up restrictions with us. After the 180-day lock-up period, these shares may be sold, subject to applicable securities laws. Notwithstanding the foregoing, for the purpose of allowing the underwriters to comply with NASD Rule 2711(f)(4), if, under certain circumstances, we release earnings results or material news or make certain announcements that we will release earnings results, or a material event relating to us occurs, then the 180-day lock-up period will be extended until 18 days following the date of release of the earnings results or the occurrence of the material news or material event, as applicable.

Registration Rights

        After the offering, the holders of approximately 35,562,661 shares of our common stock, including 737,723 shares issuable upon exercise of outstanding warrants, will be entitled to registration rights. For more information on these registration rights, see "Description of Capital Stock—Registration Rights."

97



UNDERWRITING

        We are offering shares of our common stock described in this prospectus through the underwriters named below. Lehman Brothers Inc. and SG Cowen & Co., LLC are acting as joint book-running managers for this offering. We have entered into an underwriting agreement with the representatives. Subject to the terms and conditions of the underwriting agreement, each of the underwriters has severally agreed to purchase the following respective number of shares of our common stock:

                   Underwriters

  Number of
Shares

Lehman Brothers Inc.    
SG Cowen & Co., LLC    
Needham & Company, LLC    
        
        
        
   
  Total    
   

        The underwriting agreement provides that the underwriters are obligated to purchase all the shares of common stock in the offering if any are purchased, other than those shares covered by the underwriters' option described below. The underwriting agreement also provides that if an underwriter defaults, the purchase commitments of non-defaulting underwriters may be increased or the offering may be terminated.

Option to Purchase Additional Shares

        We have granted to the underwriters a 30-day option to purchase from time to time, in whole or in part, on a pro rata basis up to             additional shares at the initial public offering price less underwriting discounts and commissions. The option may be exercised if the underwriters sell more than            shares in the offering.

Commission and Discount

        The underwriters propose to offer the shares of common stock initially at the public offering price on the cover page of this prospectus and to selling group members at that price less a selling concession of $            per share. The underwriters and selling group members may allow a discount of $            per share on sales to other broker dealers. After the initial public offering, the underwriters may change the public offering price and concession and discount to broker dealers.

        The following table summarizes the compensation and estimated expenses we will pay:

 
  Per Share
  Total
 
  Without
Exercise of Option

  With
Exercise of Option

  Without
Exercise of Option

  With
Exercise of Option

Underwriting discounts and commissions paid by us   $     $     $     $  
Expenses payable by us   $     $     $     $  

Discretionary Sales

        The representatives have informed us that the underwriters do not expect discretionary sales to exceed 5% of the shares of common stock being offered.

98



No Sales of Similar Securities

        We have agreed that we will not offer, sell, contract to sell, pledge or otherwise dispose of, directly or indirectly, or file with the SEC a registration statement under the Securities Act relating to, any shares of our common stock or securities convertible into or exchangeable or exercisable for any shares of our common stock, or publicly disclose the intention to make any offer, sale, pledge, disposition or filing, without the prior written consent of Lehman Brothers Inc. and SG Cowen & Co., LLC for a period of 180 days after the date of this prospectus, subject to specified exceptions.

        Our officers, directors and substantially all of our stockholders have agreed that they will not offer, sell, contract to sell, pledge or otherwise dispose of, directly or indirectly, any shares of our common stock or securities convertible into or exchangeable or exercisable for any shares of our common stock, enter into a transaction that would have the same effect, or enter into any swap, hedge or other arrangement that transfers, in whole or in part, any of the economic consequences of ownership of our common stock, whether any of these transactions are to be settled by delivery of our common stock or other securities, in cash or otherwise, or publicly disclose the intention to make any offer, sale, pledge or disposition, or to enter into any transaction, swap, hedge or other arrangement, without, in each case, the prior written consent of Lehman Brothers Inc. and SG Cowen & Co., LLC for a period of 180 days after the date of this prospectus, subject to specified exceptions.

Indemnification and Contribution

        We have agreed to indemnify the underwriters against liabilities under the Securities Act, or contribute to payments that the underwriters may be required to make in that respect.

Nasdaq National Market Quotation

        We have applied to have our common stock approved for quotation on the Nasdaq National Market under the symbol "SNSS."

Offering Price Determination

        Prior to the offering, there has been no public market for the common stock. The initial public offering price for the common stock will be determined by negotiation between us and the representatives, and does not reflect the market price for the common stock following the offering. The principal factors considered in determining the initial public offering price will include:

        We cannot be sure that the initial public offering price will correspond to the price at which the common stock will trade in the public market following this offering or that an active trading market for the common stock will develop and continue after this offering.

99



Price Stabilization, Short Positions and Penalty Bids

        In connection with the offering, the underwriters may engage in stabilizing transactions, short sales and purchases to cover positions created by short sales and penalty bids in accordance with Regulation M under the Securities Exchange Act of 1934.

        These stabilizing transactions, syndicate covering transactions and penalty bids may have the effect of raising or maintaining the market price of our common stock or preventing or retarding a decline in the market price of our common stock. As a result, the price of our common stock may be higher than the price that might otherwise exist in the open market. These transactions may be effected on the Nasdaq National Market or otherwise and, if commenced, may be discontinued at any time.

Electronic Distribution

        A prospectus in electronic format may be made available on the Internet sites or through other online services maintained by one or more of the underwriters and/or selling group members participating in this offering or by their affiliates. In those cases, prospective investors may view offering terms online and, depending upon the particular underwriter or selling group member, prospective investors may be allowed to place orders online. The underwriters may agree with us to allocate a specific number of shares for sale to online brokerage account holders. Any such allocation for online distributions will be made by the representatives on the same basis as other allocations.

        Other than the prospectus in electronic format, the information on any underwriter's or selling group member's website and any information contained in any other website maintained by an underwriter or selling group member is not part of the prospectus or the registration statement of which this prospectus forms a part, has not been approved and/or endorsed by us or any underwriter or

100



selling group member in its capacity as underwriter or selling group member and should not be relied upon by investors.

Stamp Taxes

        If you purchase shares of common stock offered in this prospectus, you may be required to pay stamp taxes and other charges under the laws and practices of the country of purchase, in addition to the offering price listed on the cover page of this prospectus.

Relationships

        The underwriters may in the future perform investment banking and advisory services for us from time to time for which they may in the future receive customary fees and expenses. The underwriters may, from time to time, engage in transactions with or perform services for us in the ordinary course of their business.

101



LEGAL MATTERS

        The validity of the shares of common stock offered hereby has been passed upon for Sunesis Pharmaceuticals, Inc. by Latham & Watkins LLP, Menlo Park, California. Cooley Godward LLP, Palo Alto, California, is counsel for the underwriters in connection with this offering.


EXPERTS

        Ernst & Young LLP, independent registered public accounting firm, have audited our financial statements at December 31, 2003 and 2004 and for the each of the three years in the period ended December 31, 2004, as set forth in their report. We have included our financial statements in the prospectus and elsewhere in the registration statement in reliance on Ernst & Young LLP's report, given on their authority as experts in accounting and auditing.


WHERE YOU CAN FIND MORE INFORMATION

        We have filed with the SEC a registration statement on Form S-1 under the Securities Act that registers the shares of our common stock to be sold in this offering. The registration statement, including the attached exhibits and schedules, contains additional relevant information about us and our capital stock. The rules and regulations of the SEC allow us to omit from this prospectus certain information included in the registration statement. For further information about us and our common stock, you should refer to the registration statement and the exhibits and schedules filed with the registration statement. With respect to the statements contained in this prospectus regarding the contents of any agreement or any other document, in each instance, the statement is qualified in all respects by the complete text of the agreement or document, a copy of which has been filed as an exhibit to the registration statement. In addition, upon completion of this offering, we will file reports, proxy statements and other information with the SEC under the Securities Exchange Act of 1934. You may obtain copies of this information by mail from the Public Reference Section of the SEC, 450 Fifth Street, N.W., Room 1024, Washington, D.C. 20549, at prescribed rates. You may obtain information on the operation of the public reference rooms by calling the SEC at 1-800-SEC-0330. The SEC also maintains an Internet website that contains reports, proxy statements and other information about issuers, like us, that file electronically with the SEC. The address of that website is www.sec.gov .

        We intend to provide our stockholders with annual reports containing audited financial statements, with an opinion expressed by an independent accounting firm and to file with the SEC quarterly reports containing unaudited combined financial data for the first three quarters of each year.

102



INDEX TO FINANCIAL STATEMENTS

 
  Page

Report of Independent Registered Public Accounting Firm

 

F-2

Balance Sheets

 

F-3

Statements of Operations

 

F-4

Statements of Convertible Preferred Stock and Stockholders' Deficit

 

F-5

Statements of Cash Flows

 

F-6

Notes to Financial Statements

 

F-7

F-1



REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM

The Board of Directors and Stockholders
Sunesis Pharmaceuticals, Inc.

        We have audited the accompanying balance sheets of Sunesis Pharmaceuticals, Inc. as of December 31, 2003 and 2004, and the related statements of operations, convertible preferred stock and stockholders' deficit, and cash flows for each of the three years in the period ended December 31, 2004. These financial statements are the responsibility of the Company's management. Our responsibility is to express an opinion on these financial statements based on our audits.

        We conducted our audits in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about whether the financial statements are free of material misstatement. An audit includes examining, on a test basis, evidence supporting the amounts and disclosures in the financial statements. An audit also includes assessing the accounting principles used and significant estimates made by management, as well as evaluating the overall financial statement presentation. We believe that our audits provide a reasonable basis for our opinion.

        In our opinion, the financial statements referred to above present fairly, in all material respects, the financial position of Sunesis Pharmaceuticals, Inc. at December 31, 2003 and 2004, and the results of its operations and its cash flows for each of the three years in the period ended December 31, 2004, in conformity with U.S. generally accepted accounting principles.

/s/   ERNST & YOUNG LLP                               

San Jose, California
January 21, 2005

F-2


Sunesis Pharmaceuticals, Inc.
Balance Sheets

 
   
   
  Pro forma
stockholders'
equity at
December 31,
2004

 
 
  December 31,
 
 
  2003
  2004
 
 
   
   
  (unaudited)

 
Assets                    
Current assets:                    
  Cash and cash equivalents   $ 10,477,503   $ 7,587,512        
  Marketable securities     23,365,382     29,224,509        
  Notes and interest receivable from officers and employees     11,700     163,720        
  Prepaids and other current assets     924,539     1,675,539        
   
 
       
Total current assets     34,779,124     38,651,280        

Notes and interest receivable from officers and employees

 

 

236,488

 

 

85,350

 

 

 

 
Property and equipment, net     4,990,588     3,989,357        
Deposits and other assets     300,000     300,000        
   
 
       
Total assets   $ 40,306,200   $ 43,025,987        
   
 
       
Liabilities and stockholders' deficit                    
Current liabilities:                    
  Accounts payable   $ 980,661   $ 1,662,535        
  Accrued compensation     1,256,679     1,599,217        
  Other accrued liabilities     89,582     359,404        
  Current portion of deferred revenue     3,074,549     6,031,895        
  Current portion of equipment financing     2,169,630     1,291,363        
   
 
       
Total current liabilities     7,571,101     10,944,414        

Deferred revenue

 

 

4,098,528

 

 

7,677,805

 

 

 

 
Borrowings under debt facility with related party     1,600,000     3,200,000        
Non current portion of equipment financing     1,648,610     1,238,430        
Deferred rent and other non-current liabilities     942,394     1,196,288        

Commitments

 

 

 

 

 

 

 

 

 

 
Convertible preferred stock, $0.0001 par value; 38,582,000 shares authorized, issuable in series:                    
    Series A, 8,682,000 shares designated, 8,467,500 shares issued and outstanding at December 31, 2003 and 2004 (aggregate liquidation preference of $8,467,500 at December 31, 2003 and 2004); no shares outstanding pro forma (unaudited)     8,445,567     8,445,567   $  
    Series B, 10,600,000 shares designated, 9,690,771 shares issued and outstanding at December 31, 2003 and 2004 (aggregate liquidation preference of $25,196,005 at December 31, 2003 and 2004); no shares outstanding pro forma (unaudited)     24,388,838     24,388,838      
    Series C, 13,250,000 shares designated, 12,500,000 shares issued and outstanding at December 31, 2003 and 2004 (aggregate liquidation preference of $60,000,000 at December 31, 2003 and 2004); no shares outstanding pro forma (unaudited)     56,001,692     56,001,692      
    Series C-1, 1,250,000 shares designated, issued and outstanding at December 31, 2003 and 2004 (aggregate liquidation preference of $6,000,000 at December 31, 2003 and 2004); no shares outstanding pro forma (unaudited)     5,985,372     5,985,372      
    Series C-2, 4,800,000 shares designated, 2,916,667 shares issued and outstanding at December 31, 2004 (aggregate liquidation preference of $14,000,000 at December 31, 2004); no shares outstanding pro forma (unaudited)         13,991,150      
Stockholders' equity (deficit):                    
  Common stock, $.0001 par value: 110,000,000 shares authorized; 5,442,573 and 5,908,226 shares issued and outstanding at December 31, 2003 and 2004, respectively; 40,733,164 shares outstanding pro forma (unaudited)     544     591     4,073  
  Additional paid-in capital     2,722,341     6,492,926     115,302,063  
  Notes receivable from stockholders     (225,000 )   (135,000 )   (135,000 )
  Deferred stock compensation         (2,915,673 )   (2,915,673 )
  Accumulated other comprehensive income (loss)     12,656     (69,770 )   (69,770 )
  Accumulated deficit     (72,886,443 )   (93,416,643 )   (93,416,643 )
   
 
 
 
Total stockholders' equity (deficit)     (70,375,902 )   (90,043,569 ) $ 18,769,050  
   
 
 
 
Total liabilities, convertible preferred stock and stockholders' (deficit)   $ 40,306,200   $ 43,025,987        
   
 
       

See accompanying notes.

F-3



Sunesis Pharmaceuticals, Inc.
Statements of Operations

 
  Year ended December 31,
 
 
  2002
  2003
  2004
 
Revenue:                    
  Collaboration revenue   $ 3,170,006   $ 6,842,290   $ 5,937,641  
  Collaboration revenue from related party     32,258     857,148     4,201,017  
  Grant and fellowship revenue     1,474,143     560,646     166,331  
   
 
 
 
Total revenues     4,676,407     8,260,084     10,304,989  

Operating expenses:

 

 

 

 

 

 

 

 

 

 
  Research and development     18,440,797     21,325,731     23,615,551  
  General and administrative     6,179,094     6,136,518     7,352,220  
Total operating expenses     24,619,891     27,462,249     30,967,771  

Loss from operations

 

 

(19,943,484

)

 

(19,202,165

)

 

(20,662,782

)

Interest income

 

 

1,359,861

 

 

712,931

 

 

517,645

 
Interest expense     (594,047 )   (520,586 )   (386,749 )
Other income (expense), net     (4,590 )   4,662     1,686  
   
 
 
 
Net loss   $ (19,182,260 ) $ (19,005,158 ) $ (20,530,200 )
   
 
 
 

Basic and diluted net loss per share

 

$

(4.41

)

$

(3.80

)

$

(3.71

)

Shares used in computing basic and diluted net loss per share

 

 

4,351,983

 

 

4,996,860

 

 

5,533,739

 

Pro forma basic and diluted net loss per share (unaudited)

 

 

 

 

 

 

 

$

(0.53

)

 

 

 

 

 

 

 

 



 

Shares used to compute pro forma basic and diluted net loss per share (unaudited)

 

 

 

 

 

 

 

 

38,637,365

 

 

 

 

 

 

 

 

 



 

See accompanying notes.

F-4


Sunesis Pharmaceuticals, Inc.
Statements of Convertible Preferred Stock and Stockholders' Deficit

 
  Convertible
Preferred Stock

   
   
   
   
   
  Accumulated
Other
Comprehensive
Income
(Loss)

   
   
 
 
  Common Stock
   
  Notes
Receivable
from
Stockholders

   
   
   
 
 
  Additional
Paid-In
Capital

  Deferred
Stock
Compensation

  Accumulated
Deficit

  Total
Stockholders'
Deficit

 
 
  Shares
  Amount
  Shares
  Amount
 
Balance at December 31, 2001   30,658,271   $ 88,836,097   5,307,365   $ 531   $ 2,545,770   $ (265,807 ) $   $ 303,081   $ (34,699,025 ) $ (32,115,450 )
  Issuance of common stock pursuant to stock option exercises at $0.10 to $0.60 per share, net of repurchases         71,458     7     34,639                     34,646  
  Issuance of common stock in exchange for services         2,694         1,562                     1,562  
  Expense related to fair value of options granted to nonemployees                 54,286                     54,286  
  Issuance of Series C-1 convertible preferred stock to investors at $4.80 per share for cash in December 2002, net of issuance costs of $14,628   1,250,000     5,985,372                                
  Repayment of stockholder note in June 2002                     7,081                 7,081  
  Reclassification of interest on notes to interest receivable                     8,340                 8,340  
  Components of comprehensive loss:                                                          
    Net loss                                   (19,182,260 )   (19,182,260 )
    Unrealized loss on investments                             (235,991 )       (235,991 )
                                                     
 
    Comprehensive loss                                                       (19,418,251 )
   
 
 
 
 
 
 
 
 
 
 
Balance at December 31, 2002   31,908,271     94,821,469   5,381,517     538     2,636,257     (250,386 )       67,090     (53,881,285 )   (51,427,786 )
  Issuance of common stock pursuant to stock options exercises at $0.10 to $0.60 per share, net of repurchases         61,056     6     41,162                     41,168  
  Repayment of stockholder note in June 2003                     25,386                 25,386  
  Expenses related to fair value of options granted to nonemployees                 36,098                     36,098  
  Issuance of warrant to purchase preferred stock in connection with financing arrangement                 8,824                     8,824  
  Components of comprehensive loss:                                                          
    Net loss                                   (19,005,158 )   (19,005,158 )
    Unrealized loss on investments                             (54,434 )       (54,434 )
                                                     
 
    Comprehensive loss                                                       (19,059,592 )
   
 
 
 
 
 
 
 
 
 
 
Balance at December 31, 2003   31,908,271     94,821,469   5,442,573     544     2,722,341     (225,000 )       12,656     (72,886,443 )   (70,375,902 )
Issuance of common stock pursuant to stock options exercises at $0.10 to $0.60 per share for cash, net of unvested stock options exercised early         465,653     47     233,116                     233,163  
Deferred stock compensation related to employee stock option grants, net of cancellations                 3,339,691         (3,339,691 )            
Amortization deferred stock compensation                         424,018             424,018  
Expenses related to fair value of options granted to nonemployees                 194,474                       194,474  
Issuance of warrant to purchase preferred stock in connection with financing arrangement                 3,304                     3,304  
Issuance of Series C-2 convertible preferred stock to investors at $4.80 per share for cash in Sept, 2004, net of issuance costs of $8,850   2,916,667     13,991,150                                
Repayment of stockholder note in April, 2004                     90,000                 90,000  
Components of comprehensive loss:                                                          
    Net loss                                 (20,530,200 )   (20,530,200 )
    Unrealized loss on investments                             (82,426 )       (82,426 )
                                                     
 
    Comprehensive loss                                                       (20,612,626 )
   
 
 
 
 
 
 
 
 
 
 
Balance at December 31, 2004   34,824,938   $ 108,812,619   5,908,226   $ 591   $ 6,492,926   $ (135,000 ) $ (2,915,673 ) $ (69,770 ) $ (93,416,643 ) $ (90,043,569 )
   
 
 
 
 
 
 
 
 
 
 

See accompanying notes.

F-5



Sunesis Pharmaceuticals, Inc.
Statements of Cash Flows

 
  Year ended December 31,
 
 
  2002
  2003
  2004
 
Cash flows from operating activities                    
Net loss   $ (19,182,260 ) $ (19,005,158 ) $ (20,530,200 )
Adjustments to reconcile net loss to net cash used in operating activities:                    
  Depreciation and amortization     2,177,427     2,630,042     2,170,808  
  Stock compensation expense     55,848     36,098     618,492  
  Changes in operating assets and liabilities:                    
    Prepaids and other current assets     (208,124 )   (197,063 )   (749,460 )
    Notes and interest receivable from officers and employees     (11,107 )   (29,549 )   882  
    Deposits and other assets     39,533          
    Accounts payable     (699,763 )   488,804     681,874  
    Accrued compensation     543,443     179,057     342,538  
    Other accrued liabilities     58,762     (60,307 )   264,333  
    Deferred rent     377,249     280,407     253,894  
    Deferred revenue     2,936,486     3,799,090     6,536,623  
   
 
 
 
Net cash used in operating activities     (13,912,506 )   (11,878,579 )   (10,410,216 )
   
 
 
 

Cash flows from investing activities

 

 

 

 

 

 

 

 

 

 
Purchases of property and equipment, net     (1,060,223 )   (1,666,959 )   (1,169,577 )
Purchases of marketable securities     (23,492,855 )   (36,893,824 )   (35,264,682 )
Maturities of marketable securities     39,224,825     44,310,576     29,323,129  
   
 
 
 
Net cash provided by (used in) investing activities     14,671,747     5,749,793     (7,111,130 )
   
 
 
 

Cash flows from financing activities

 

 

 

 

 

 

 

 

 

 
Proceeds from borrowings under debt facility with related party         1,600,000     1,600,000  
Proceeds from borrowings under note payable and equipment loans     1,688,293     1,415,385     935,036  
Payments on note payable and equipment loans     (2,128,148 )   (2,793,770 )   (2,223,483 )
Proceeds from issuance of common stock and exercise of options, net of repurchases     41,727     66,554     328,652  
Proceeds from issuance of convertible preferred stock, net of issuance costs     5,985,372         13,991,150  
   
 
 
 
Net cash provided by financing activities     5,587,244     288,169     14,631,355  
   
 
 
 

Net increase (decrease) in cash and cash equivalents

 

 

6,346,485

 

 

(5,840,617

)

 

(2,889,991

)
Cash and cash equivalents at beginning of period     9,971,635     16,318,120     10,477,503  
   
 
 
 
Cash and cash equivalents at end of period   $ 16,318,120   $ 10,477,503     7,587,512  
   
 
 
 

Supplemental disclosure of cash flow information

 

 

 

 

 

 

 

 

 

 
Interest paid   $ 594,047   $ 520,586   $ 386,749  
   
 
 
 
Non-cash activities:                    
  Deferred stock based compensation   $   $   $ 3,339,691  
   
 
 
 
  Issuance of warrants for financing arrangement   $   $ 8,824   $ 3,304  
   
 
 
 

See accompanying notes.

F-6



Sunesis Pharmaceuticals, Inc.

Notes to Financial Statements

1. Organization and Summary of Significant Accounting Policies

Organization

        Sunesis Pharmaceuticals, Inc. (the "Company") was incorporated in the state of Delaware on February 10, 1998, and its facilities are located in South San Francisco, California. Sunesis is a clinical-stage biopharmaceutical company focused on discovering, developing and commercializing small molecule therapeutics for oncology, inflammatory diseases and other unmet medical needs. The Company's primary activities since incorporation have been conducting research and development internally and through corporate collaborators, in-licensing pharmaceutical compounds, performing business and financial planning, and raising capital.

Need to Raise Additional Capital

        The accompanying financial statements have been prepared assuming that the Company will continue as a going concern. The Company has incurred significant net losses and negative cash flows from operations since its inception. At December 31, 2004, the Company had an accumulated deficit of $93,416,643. At December 31, 2004, management believes that currently available cash, cash equivalents and marketable securities together with amounts available to be borrowed under existing financing agreements will provide sufficient funds to enable the Company to meet its obligations through March 31, 2006. Management plans to continue to finance the Company's operations with a combination of equity issuances, debt arrangements, and revenues from collaborations with pharmaceutical companies, technology licenses, and in the longer term, product sales and royalties. If adequate funds are not available, the Company may be required to delay, reduce the scope of, or eliminate one or more of its development programs or obtain funds through collaborative arrangements with others that may require the Company to relinquish rights to certain of its technologies, product candidates, or products that the Company would otherwise seek to develop or commercialize itself. The Company intends to raise additional funds through the issuance of equity securities, if available on terms acceptable to the Company.

Use of Estimates

        The preparation of financial statements in conformity with U.S. generally accepted accounting principles requires management to make estimates and assumptions that materially affect the amounts reported in the financial statements and accompanying notes. Actual results could differ from these estimates.

Unaudited Pro Forma Stockholders' Equity

        The Company has filed a registration statement with the Securities and Exchange Commission for the Company to sell shares of its common stock to the public. If the initial public offering is completed under the terms presently anticipated, all of the Series A, Series B, Series C, Series C-1, and Series C-2 convertible preferred stock outstanding at the time of the offering will convert into 34,824,938 shares of common stock, assuming a one-for-one conversion ratio. Unaudited pro forma stockholders' equity, as adjusted for the assumed conversion of the preferred stock, is set forth on the accompanying balance sheets.

F-7



Clinical Trials Accounting

        All of the Company's clinical trials are performed by contract research organizations ("CROs") and participating clinical trial sites. Some CROs bill monthly for services performed, and others bill based upon milestones achieved. For the latter, the Company accrues clinical trial expenses based on the services performed each period. Costs of setting up clinical trial sites for participation in the trials are expensed immediately as research and development expenses. Clinical trial site costs related to patient enrollment are accrued as patients are entered into the trial reduced by any initial payment made to the clinical trial site when the first patient is enrolled.

Cash Equivalents and Marketable Securities

        The Company considers all highly liquid securities with original maturities of three months or less from the original date of purchase to be cash equivalents, which consist of money market funds and corporate debt securities. Marketable securities consist of securities with original maturities greater than three months, and consist of money market funds, corporate debt securities and U.S. government obligations.

        Management determines the appropriate classification of securities at the time of purchase. The Company has classified its entire investment portfolio as available-for-sale. The Company views its available-for-sale portfolio as available for use in current operations. Accordingly, the Company has classified all investments as short-term, even though the stated maturity may be one year or more beyond the current balance sheet date. Available-for-sale securities are carried at fair value with unrealized gains and losses reported in accumulated other comprehensive income (loss) as a separate component of stockholders' deficit. The estimated fair values have been determined by the Company using available market information.

        The amortized cost of securities is adjusted for amortization of premiums and accretion of discounts to maturity. Such amortization is included in interest income. Realized gains and losses and declines in value judged to be other-than-temporary on available-for-sale securities, if any, are recorded in other income (expense), net. The cost of securities sold is based on the specific-identification method. Interest and dividends are included in interest income.

Concentrations of Credit Risk and Financial Instruments

        The Company invests cash that is not currently being used for operational purposes in accordance with its investment policy. The policy allows for the purchase of low risk debt securities issued by U.S. government agencies and very highly rated banks and corporations, subject to certain concentration limits. The maturities of these securities are maintained at no longer than 18 months. The Company believes its established guidelines for investment of its excess cash maintain safety and liquidity through its policies on diversification and investment maturity.

        Financial instruments that potentially subject the Company to concentrations of credit risk consist principally of cash and cash equivalents, available-for-sale investment securities, and employee receivables. The carrying amounts of cash equivalents and available-for-sale investment securities approximate fair value due to their short term nature. The carrying amounts of borrowings under the Company's debt facilities approximate fair value based on the current interest rates for similar borrowing arrangements.

F-8



        The Company is exposed to credit risk in the event of default by the institutions holding the cash, cash equivalents, and available-for-sale securities to the extent of the amounts recorded on the balance sheets.

Property and Equipment

        Property and equipment are stated at cost, less accumulated depreciation and amortization. Depreciation is determined using the straight-line method over the estimated useful lives of the respective assets, generally three to five years. Leasehold improvements are amortized on a straight-line basis over the shorter of their estimated useful lives or the term of the lease.

Stock-Based Compensation

        The Company accounts for employee stock options using the intrinsic-value method in accordance with Accounting Principles Board ("APB") Opinion No. 25, Accounting for Stock Issued to Employees , Financial Accounting Standards Board Interpretation ("FIN") No. 44, Accounting for Certain Transactions Involving Stock Compensation, an Interpretation of APB No. 25 , a related interpretation and has adopted the disclosure-only provisions of SFAS No. 123, Accounting for Stock-Based Compensation .

        The Company has elected to continue to follow the intrinsic-value method of accounting as prescribed by APB Opinion No. 25. The information regarding net loss as required by SFAS No. 123 has been determined as if the Company had accounted for its employee stock options under the fair value method of that Statement. The resulting effect on net losses to date pursuant to SFAS No. 123 is not likely to be representative of the effects on net loss pursuant to SFAS No. 123 in future years, since future years are likely to include additional grants and the impact of future years' vesting.

        Stock compensation arrangements to non-employees are accounted for in accordance with SFAS No. 123, as amended, and EITF No. 96-18, Accounting for Equity Instruments That Are Issued to Other than Employees for Acquiring, or in Conjunction with Selling, Goods or Services , using a fair value approach. The compensation costs of these arrangements are subject to remeasurement over the vesting terms as earned.

        During the year ended December 31, 2004, certain stock options were granted with exercise prices that were below the reassessed fair value of the common stock at the date of grant. Deferred stock compensation of $3,339,691 was recorded during the year ended December 31, 2004 in accordance with APB Opinion No. 25, and will be amortized on a straight-line basis over the related vesting terms of the options. The Company recorded employee stock compensation expense of $424,018 for the year ended December 31, 2004.

        The expected future amortization expense for deferred compensation as of December 31, 2004 is as follows:

Year ending December 31,

   
2005   $ 834,923
2006     834,923
2007     834,923
2008     410,904
   
    $ 2,915,673
   

F-9


        The following table illustrates the weighted-average assumptions for the minimum value model used in determining the fair value of options granted to employees:

 
  Year ended December 31,
 
 
  2002
  2003
  2004
 
Risk-free interest rate   4.6 % 4.0 % 4.2 %
Dividend yield   0 % 0 % 0 %
Weighted-average expected life   5 years   5 years   5 years  

        The following table illustrates the effect on net loss per share had the Company applied the fair value provisions of SFAS No. 123 to employee stock compensation:

 
  Year ended December 31,
 
 
  2002
  2003
  2004
 
Net loss, as reported   $ (19,182,260 ) $ (19,005,158 ) $ (20,530,200 )
Add: employee stock compensation expense based on the intrinsic value method             424,018  
Deduct: total employee stock-based compensation expense determined under the fair value method for all awards     (122,482 )   (151,952 )   (649,089 )
   
 
 
 
Pro forma net loss   $ (19,304,742 ) $ (19,157,110 ) $ (20,755,271 )
   
 
 
 

Net loss per share:

 

 

 

 

 

 

 

 

 

 
  Basic and diluted, as reported   $ (4.41 ) $ (3.80 ) $ (3.71 )
   
 
 
 
  Basic and diluted, pro forma   $ (4.44 ) $ (3.83 ) $ (3.75 )
   
 
 
 

Comprehensive Loss

        The Company displays comprehensive loss and its components as part of the statement of convertible preferred stock and stockholders' deficit. Comprehensive loss is comprised of net loss and unrealized gains (losses) on available for sale securities.

Revenue Recognition

        In accordance with Emerging Issues Task Force, or EITF, 00-21, Accounting for Revenue Arrangements with Multiple Deliverables , which the Company adopted effective July 1, 2003, revenue arrangements with multiple deliverable items are divided into separate units of accounting if certain criteria are met, including whether the delivered item has stand-alone value to the customer and whether there is objective and reliable evidence of the fair value of the undelivered items. The Company allocates the consideration it receives among the separate units of accounting based on their respective fair value, and applies the applicable revenue recognition criteria to each of the separate units. Where an item in a revenue arrangement with multiple deliverables does not constitute a separate unit of accounting and for which delivery has not occurred, the Company defers revenue until the delivery of the item is completed.

F-10



        Upfront, non-refundable license fees and other fees received in connection with research and development collaboration are recorded as deferred revenue and recognized ratably over the relevant period specified in the agreements, generally the research term.

        Research funding related to collaborative research with the Company's collaboration partners is recognized as the related research services are performed. This funding is normally based on a specified amount per full-time equivalent employee per year.

        Revenue from milestone payments, which are substantially at risk at the time the collaboration agreement is entered into and performance-based at the date of the collaboration agreement, is recognized upon completion of the applicable milestone events. Royalty revenue is recognized based on reported product sales by third-party licensees.

        Grant revenues from government agencies and private research foundations are recognized as the related qualified research and development costs are incurred, up to the limit of the prior approval funding amounts.

Research and Development

        All research and development costs, including those funded by third parties, are expensed as incurred. Research and development costs consist of salaries, employee benefits, laboratory supplies, costs associated with clinical trials, including amounts paid to clinical research organizations, other professional services and facility costs.

Income Taxes

        The Company accounts for income taxes under SFAS No. 109, Accounting for Income Taxes ("SFAS 109"). Under this method, deferred tax assets and liabilities are determined based on the differences between the financial reporting and tax bases of assets and liabilities and are measured using the enacted tax rates that will be in effect when the differences are expected to reverse. Valuation allowances are established when necessary to reduce deferred tax assets to the amounts expected to be realized.

Long-Lived Assets

        The Company periodically assesses the impairment of long-lived assets in accordance with the provisions of SFAS No. 144 ("SFAS 144"), Accounting for the Impairment or Disposal of Long-Lived Assets . A review for impairment is performed whenever events or changes in circumstances indicate that the carrying amount of such assets may not be recoverable, such as a significant industry or economic downturn, significant changes in the manner of use of the acquired assets or the strategy for the Company's overall business. If indicators of impairment exist, recoverability is assessed by comparing the estimated undiscounted cash flows resulting from the use of the asset and its eventual disposition against its carrying amount. If the aggregate undiscounted cash flows are less than the carrying amount of the asset, the resulting impairment charge to be recorded is calculated based on the excess of the carrying value of the asset over the fair value of such asset, with fair value determined based on an estimate of discounted future cash flows or other appropriate measure of fair value. For the years ended December 31, 2002, 2003 and 2004, no impairment charges were recorded.

F-11



Recent Accounting Pronouncements

        On December 16, 2004, the Financial Accounting Standards Board (FASB) issued FASB Statement No. 123 (revised 2004), Share-Based Payment, which is a revision of FASB Statement No. 123, Accounting for Stock-Based Compensation . Statement 123(R) supersedes APB Opinion No. 25, Accounting for Stock Issued to Employees , and amends FASB Statement No. 95, Statement of Cash Flows . Generally, the approach in Statement 123(R) is similar to the approach described in Statement 123. However, Statement 123(R) requires all share-based payments to employees, including grants of employee stock options, to be recognized in the income statement based on their fair values. Pro forma disclosure is no longer an alternative. The Company expects to adopt Statement 123(R) on January 1, 2006.

        As permitted by Statement 123, the Company currently accounts for share-based payments to employees using Opinion 25's intrinsic value method. Accordingly, the adoption of Statement 123(R)'s fair value method will have a material impact on the results of operations, although it will have no impact on the overall financial position. The impact of adoption of Statement 123(R) cannot be predicted at this time because it will depend on levels of share-based payments granted in the future.

2. Net Loss per Share

        Basic net loss per share is calculated by dividing the net loss by the weighted-average number of common shares outstanding for the period, less the weighted average unvested common shares subject to repurchase. Diluted net loss per share is computed by dividing the net loss by the weighted-average number of common shares outstanding, less the weighted average unvested common shares subject to repurchase, and dilutive potential common shares for the period determined using the treasury stock method. For purposes of this calculation, preferred stock, options to purchase stock, and warrants to purchase stock are considered to be potential common shares and are only included in the calculation of diluted net loss per common share when their effect is dilutive.

F-12



        The unaudited pro forma basic and diluted net loss per common share calculations assume the conversion of all outstanding shares of preferred stock into shares of common stock using the as-if-converted method as of January 1, 2003 or the date of issuance, if later.

 
  Year ended December 31,
 
 
  2002
  2003
  2004
 
Historical                    
Numerator:                    
  Net loss   $ (19,182,260 ) $ (19,005,158 ) $ (20,530,200 )
Denominator:                    
  Weighted-average common shares outstanding     5,334,558     5,405,756     5,664,790  
  Less: Weighted-average unvested common shares subject to repurchase     (982,575 )   (408,896 )   (131,051 )
   
 
 
 
Denominator for basic and diluted net loss per share     4,351,983     4,996,860     5,533,739  
   
 
 
 
Basic and diluted net loss per share   $ (4.41 ) $ (3.80 ) $ (3.71 )
   
 
 
 

Pro forma

 

 

 

 

 

 

 

 

 

 
Net loss               $ (20,530,200 )
Pro forma basic and diluted net loss per share (unaudited)               $ (0.53 )
               
 
Denominator for pro forma basic and diluted net loss per share:                    
  Shares used above (unaudited)                 5,533,739  
  Pro forma adjustments to reflect assumed weighted-average effect of conversion of preferred stock (unaudited)                 33,103,626  
               
 
  Shares used to compute pro forma basic and diluted net loss per common share (unaudited)                 38,637,365  
               
 

Outstanding securities not included in diluted net loss per share calculation

 

 

 

 

 

 

 

 

 

 
Preferred stock     31,908,271     31,908,271     34,824,938  
Options to purchase common stock     4,848,784     5,824,567     7,140,666  
Warrants     912,031     915,031     916,466  
   
 
 
 
      37,669,086     38,647,869     42,882,070  
   
 
 
 

F-13


3. Short-Term Investments

        The following is a summary of available-for-sale securities:

 
  Amortized
Cost

  Gross
Unrealized
Gains

  Gross
Unrealized
Losses

  Estimated
Fair Value

 
December 31, 2003                          
Money market funds   $ 10,447,156   $   $   $ 10,447,156  
Corporate debt obligations     23,352,726     17,644     (4,988 )   23,365,382  
   
 
 
 
 
Total     33,799,882     17,644     (4,988 )   33,812,538  
Less amounts classified as cash equivalents     (10,447,156 )           (10,447,156 )
   
 
 
 
 
Total marketable securities   $ 23,352,726   $ 17,644   $ (4,988 ) $ 23,365,382  
   
 
 
 
 
 
  Amortized
Cost

  Gross
Unrealized
Gains

  Gross
Unrealized
Losses

  Estimated
Fair Value

 
December 31, 2004                          
Money market funds   $ 7,512,583   $   $   $ 7,512,583  
U.S government and related agency issues     1,946,735         (1,555 )   1,945,180  
Corporate debt obligations     20,388,712         (70,087 )   20,318,625  
Commercial paper     6,265,926     2,535     (670 )   6,267,791  
Certificate of deposit     692,906     7         692,913  
   
 
 
 
 
Total     36,806,862     2,542     (72,312 )   36,737,092  
Less amounts classified as cash equivalents     (7,512,583 )           (7,512,583 )
   
 
 
 
 
Total marketable securities   $ 29,294,279   $ 2,542   $ (72,312 ) $ 29,224,509  
   
 
 
 
 

        There were no realized gains or losses on the sale of available-for-sale securities for the years ended December 31, 2002, 2003 and 2004.

        At December 31, 2003 and 2004, the contractual maturities of marketable securities were as follows:

 
  December 31, 2003
  December 31, 2004
 
  Amortized
Cost

  Fair
Value

  Amortized
Cost

  Fair
Value

Due in one year or less   $ 21,195,898   $ 21,208,175   $ 25,604,553   $ 25,556,472
Due in more than one year     2,156,828     2,157,207     3,689,727     3,668,037
   
 
 
 
Total   $ 23,352,726   $ 23,365,382   $ 29,294,280   $ 29,224,509
   
 
 
 

4. License Agreements

The Regents of the University of California

        In December 1998, the Company entered into an exclusive license agreement with The Regents of the University of California (the "Regents") for rights to certain technology to identify small molecule drug leads. The agreement provides the Company with an exclusive license to develop, make, use, and

F-14



sell products derived from the licensed technology, and will continue for the life of the last-to-expire patent. To date, the licensed technology has produced two issued patents, U.S. Patent Nos. 6,344,330 and 6,344,334 which are both due to expire on March 27, 2018. The agreement provides for the Company to pay the Regents noncreditable, nonrefundable fees of up to $75,000 according to a payment schedule of which $55,000 has been paid, as well as to issue to the Regents 50,000 shares of common stock, which were issued in December 1998. The Company has agreed to achieve certain development milestones of compounds derived from the licensed technology including initiation of preclinical testing due June 30, 2002 and initiation of clinical testing due June 30, 2004. If such milestones are not met, the Regents, upon providing written notice to the Company, may seek to either terminate the agreement or amend the exclusive license to be a nonexclusive license. Because the Company no longer uses the licensed technology and none of the Company's preclinical or clinical compound originates from the licensed technology, the preclinical and clinical milestones have not been met. The Company has not received written notice from the Regents and continues to provide the Regents of status reports of the state of the licensed technology. The Company also continues to maintain patents and patent applications that cover the licensed technology because of its belief that some aspects of the licensed technology may provide some value in the future.

Dainippon Pharmaceutical Co., Ltd.

        In October 2003, the Company entered into an agreement with Dainippon Pharmaceutical Co., Ltd. ("Dainippon") to acquire exclusive worldwide development and marketing rights for Dainippon's anti-cancer compound, referred to as SNS-595.

        Under the terms of this agreement, the Company made a non-refundable payment of $700,000 which was included in research and development expense. The Company may in the future make a series of milestone payments of up to $10.7 million to Dainippon based on successful development and regulatory approval of SNS-595, including a $500,000 payment upon commencement of Phase II clinical trials, as well as royalty payments based on any future total annual product sales. In return, the Company has received an exclusive, worldwide license to develop and market SNS-595.

5. Collaborative Research Agreements

Chiesi Farmaceutici S.p.A.

        In October 2001, the Company entered into a research collaboration to discover and develop small molecules that inhibit a well-validated protein target involved in immunological diseases with Chiesi Farmaceutici S.p.A ("Chiesi"). Using its proprietary discovery technology, the Company was to generate development candidates and Chiesi was to have an exclusive option to enter into an exclusive license to develop and market resulting products in certain territories.

        Under the terms of the agreement with Chiesi, the Company received an upfront, nonrefundable payment of $500,000 and research funding and was to receive research and development milestones and royalty payments based on future events and sales. The upfront fee was recognized as revenue over the three-year term of the agreement. Costs associated with research and development activities attributable to this agreement approximated the research funding revenue recognized. This agreement was terminated on December 31, 2002, and the Company completed its remaining performance obligations in 2003.

F-15



Johnson & Johnson Pharmaceutical Research and Development, L.L.C.

        In May 2002, the Company entered into a research collaboration to discover small molecule inhibitors of Cathepsin S with Johnson & Johnson Pharmaceutical Research & Development, L.L.C ("JJPRD"). The Company will apply its proprietary Tethering technology to discover novel inhibitors of Cathepsin S in this collaboration.

        Under the terms of the agreement, the Company received a non-refundable and non-creditable technology access fee of $500,000 in February 2003, and certain research funding to be paid in advance quarterly. The Company may in the future receive research and development milestones of up to $24.5 million as well as royalty payments from JJPRD based on future product sales. On December 15, 2002, the Company and JJPRD amended their collaboration to increase the number of JJPRD funded full-time equivalents for 2003. In December 2002, JJPRD also made the first milestone payment of $250,000 to the Company for the delivery of a novel lead series of compounds. On December 15, 2003, the Company and JJPRD again amended their collaboration to extend the research funding for one additional year from May 3, 2004 through May 2, 2005. On December 22, 2004, the Company and JJPRD amended their collaboration to extend the research funding from May 3, 2005 until December 31, 2005. Unamortized upfront fees are being recognized as revenue ratably over the remaining research term. Costs associated with research and development activities attributable to this agreement approximate the research funding recognized.

Biogen Idec, Inc.

        In December 2002, the Company entered into research collaboration with Biogen Idec, Inc. ("Biogen Idec") to discover oral therapeutics. The collaboration will apply the Company's Tethering technology to generate small molecule leads to selected TNF family cytokines involved in immune and inflammatory disease.

        During the initial phase of the collaboration, both companies will contribute scientists and discovery resources to the collaboration at their own cost. Under an exclusive worldwide license to compounds resulting from these efforts, Biogen Idec will have the right to develop, manufacture, and commercialize compounds discovered under the collaboration.

        Under the terms of the agreement, the Company received an upfront, nonrefundable and noncreditable technology access fee of $3 million which is being recognized as revenue over the 30-month term of the agreement and the one-year option period. In addition, the Company started receiving quarterly maintenance fees of $357,500 commencing April 1, 2004, and the Company may in the future receive research and development milestones of up to $60.5 million and royalty payments based on total annual future product sales. In certain circumstances, such as the cessation of the development of particular compounds, milestone payments received may be credited against future milestone payments with respect to compounds directed to the same target as the discontinued compound. As such, the Company recognizes the milestones received as revenue ratably over the remaining term of the agreement.

        Concurrent with the signing of the agreement, Biogen Idec made a $6,000,000 equity investment and purchased 1,250,000 shares of the Company's Series C-1 preferred stock at a price of $4.80 per share. Biogen Idec has also agreed to loan the Company up to $4,000,000 with a drawdown period of ten calendar quarters beginning on January 1, 2003 and ending on June 30, 2005. The principal and

F-16



accrued interest of each draw will be due five years from the date of advance of each draw and bear interest at three percent above LIBOR (LIBOR was 1.46% at December 31, 2003 and 3.10% at December 31, 2004) to be paid quarterly. As of December 31, 2003 and 2004, the Company had drawn $1,600,000 and $3,200,000, respectively, with $2,400,000 and $800,000, respectively, available for future draws. This agreement will expire in July 2005, unless extended.

        On August 27, 2004, the Company entered into the second research collaboration with Biogen Idec to discover and develop small molecules targeting kinases, a family of cell signaling enzymes that play a role in the progression of cancer. The Company will apply its proprietary Tethering, fragmented-based drug discovery technology, in an effort to generate novel small molecule leads that inhibit the oncology kinase targets that are covered by this collaboration.

        One of the kinase targets in the collaboration is Raf, and the Company's Raf program was folded into the collaboration. Under the terms of the agreement, the Company received a $7 million upfront nonrefundable and noncreditable technology access fee, which is being recognized as revenue over an initial four-year research term. In the event that Biogen Idec decides to exercise its option to extend the initial four-year research term for one additional year, Biogen Idec will pay to the Company an additional technology access fee specified in the agreement. In addition, the Company will receive quarterly research funding of $1.2 million to be paid in advance to support some of its scientific personnel, and the Company may in the future receive pre-commercialization milestone payments of up to $60.5 million and royalty payments based on product sales. The Company retains an option to participate in the co-development and co-promotion of several products that may emerge from this collaboration.

        Concurrent with the signing of the agreement, Biogen Idec made a $14 million equity investment and purchased 2,916,667 shares of the Company's Series C-2 preferred stock at a price of $4.80 per share.

Merck & Co., Inc.

        In February 2003, the Company and Merck & Co., Inc. ("Merck") entered into a four-year research collaboration to discover novel oral therapeutics to BACE, an Alzheimer's disease target. The Company will contribute an initial series of small-molecule inhibitors and use of Tethering to discover additional novel series of small molecules. Under the terms of the agreement, the Company received a nonrefundable and noncreditable technology access fee of $5 million which is being recognized as revenue ratably over the research term of four years. In addition, the Company receives research and development funding, paid in advance quarterly, and may in the future receive a series of milestone payments of up to $90.3 million based on the successful development and approval of a compound identified through the program. Merck will also make royalty payments based on future sales, and will receive an exclusive, worldwide license to products resulting from the collaboration. Merck and the Company will also have the option to expand the collaboration to additional therapeutic targets.

        On July 22, 2004, the Company and Merck entered into a second multi-year research collaboration to discover novel oral drugs for the treatment of viral infections. The Company will provide Merck with a series of small molecule compounds targeting viral infections. These compounds were derived from Tethering. Merck will be responsible for advancing these compounds into lead optimization, preclinical development, and clinical studies. Merck will pay annual license fees for Sunesis' consulting services

F-17



and ongoing access to Tethering as a means of identifying additional compounds for the treatment of viral infections.

        Under the terms of the agreement, the Company received an upfront, nonrefundable and noncreditable technology access fee of $2.3 million which is being recognized as revenue over an initial three-year research term, annual license fees aggregating $950,000 and payments based on the achievement of development milestones of up to $22.1 million. In addition, the Company will receive royalty payments based on net sales for products resulting from the collaboration. Merck receives an exclusive worldwide license to any products resulting from the collaboration.

        In connection with the above collaboration agreements, the Company recognized the following revenues, which include the amortization of upfront fees received, research funding, and milestones earned:

 
  Year ended December 31,
 
  2002
  2003
  2004
Chiesi   $ 2,003,340   $ 841,661   $
J&J PRD     1,166,666     2,350,001     1,334,333
Merck         3,650,628     4,603,308
   
 
 
      3,170,006     6,842,290     5,937,641
Biogen Idec-related party     32,258     857,148     4,201,017
   
 
 
    $ 3,202,264   $ 7,699,438   $ 10,138,658
   
 
 

6. Notes Receivable from Officers and Employees

        In July 1999, the Company issued a full recourse note receivable of $150,000 to an employee to finance the purchase of personal assets. The note is secured by shares of the Company's common stock held by the employee and is non-interest bearing with a four-year term. The principal is to be forgiven at the rate of 25% annually upon the anniversary of the employment date. As of December 31, 2003, the Company had forgiven the total amount of the note. The Company has recorded the forgiveness and the tax portion of the imputed interest as a charge to general and administrative expense.

        In April 2000, the Company issued a full recourse note receivable of $100,000 to an officer to finance the purchase of a home. The note is secured by shares of the Company's common stock held by the employee, and bears an interest rate of 6.6% per annum, with a five-year term. Under the terms of the loan, the principal and accrued interest are to be forgiven at the end of the term.

        In July 2001, the Company issued a full recourse note receivable of $85,350 to an employee to finance the purchase of personal assets. The note is secured by a second deed of trust on the employee's residence, and is non-interest bearing with a five-year term. The note is not forgivable, and in the event the employee ceases employment with the Company, the note shall become due immediately.

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7. Property and Equipment

        Property and equipment consist of the following:

 
  December 31,
 
 
  2003
  2004
 
Computer equipment and software   $ 1,992,114   $ 2,242,659  
Furniture and office equipment     551,710     576,188  
Laboratory equipment     6,845,518     7,446,076  
Leasehold improvements     4,881,839     4,930,832  
   
 
 
      14,271,181     15,195,755  
Less accumulated depreciation and amortization     (9,280,593 )   (11,206,398 )
   
 
 
    $ 4,990,588   $ 3,989,357  
   
 
 

        Equipment purchased under equipment financing agreements (see Note 8) is included in property and equipment. At December 31, 2003 and 2004, financed equipment had a cost basis of $8,674,231 and $5,886,831, respectively, with accumulated depreciation of $5,477,326 and $3,474,704, respectively.

8. Equipment Financing and Debt Facility

        In June 2000, the Company entered into an equipment financing agreement with a financing company, which has been amended from time to time. The credit facility is available through May 2005. The equipment loans are secured by the equipment financed.

        In conjunction with an amendment to the agreement in May 2003, the Company issued warrants to the financing company to purchase 3,000 shares of the Company's Series C convertible preferred stock at $4.80 per share and in conjunction with another amendment to the agreement in June 2004, the Company issued warrants to the financing company to purchase 1,435 shares of the Company's Series C convertible preferred stock at $4.80 per share.

        The fair values of the warrants issued in May 2003 and June 2004 are $8,824 and $3,304, respectively, as determined using the Black-Scholes options pricing model, and are being accounted for as prepaid interest and expensed on a straight-line basis over the term of the agreement (12 months). The warrants shall be exercisable until the earlier of ten years after the date of issuance or three years after the Company completes an initial public offering. Under the terms of the amended agreement, the Company is required to meet certain equipment holding ratios in respect of categories of equipment financed by the end of the equipment financing line in April 2005 as specified in the agreement.

        As of December 31, 2003 and 2004, the Company had drawn $6,464,245 and $7,399,281, respectively, to finance equipment purchases and leasehold improvements and had $1,951,347 and $1,117,234 respectively available under the facility. Outstanding borrowings bear interest at rates ranging from 7.4% to 12.49% as of December 31, 2003 and 2004, and are to be paid over 36 to 48 months.

        As of December 31, 2003 and 2004, the Company was in compliance with all the covenants in these loan agreements.

F-19



        Pursuant to the collaboration agreement with Biogen Idec, the Company had drawn $1,600,000 and $3,200,000 under a facility loan agreement as of December 31, 2003 and 2004, respectively. Refer to Note 5 with regard to the terms and conditions of the facility.

        Aggregate future minimum payments under all debt arrangements at December 31, 2004 are as follows:

Year ending December 31,        
  2005   $ 1,449,873  
  2006     809,075  
  2007     399,041  
  2008     1,731,131  
  2009     1,600,000  
   
 
Total minimum payments     5,989,120  
Less amount representing interest     (259,327 )
   
 
Present value of minimum payments     5,729,793  
Less current portion     (1,291,363 )
   
 
Long-term portion   $ 4,438,430  
   
 

9. Commitments and Contingencies

        In May 2000, the Company entered into a noncancelable operating lease for its facilities in South San Francisco, California, which expires in June 2013.

        Following is a schedule of the Company's noncancelable lease commitments:

Year ending December 31,      
  2005   $ 2,637,976
  2006     2,717,115
  2007     2,798,629
  2008     2,882,588
  2009     2,969,065
  2010 and thereafter     11,098,559
   
    $ 25,103,932
   

        The operating lease agreement provides for increasing monthly rent payments over the lease term. The Company recognizes rent expense on a straight-line basis. For the years ended December 31, 2002, 2003 and 2004, the Company recorded rent expense, net of sublease rental, of $2,794,711, $2,812,932 and $2,817,186, respectively. The deferred rent balance of $942,394 and $1,194,166 at December 31, 2003 and 2004, respectively, represents the difference between actual rent payments and the straight-line expense.

Contingencies

        From time to time, the Company may become involved in claims and other legal matters arising in the ordinary course of business. As of December 31, 2004, management is not aware of any matters that could have a material adverse effect on the financial position, results of operations or cash flows of the Company.

F-20


10. Stockholders' Deficit

        In December 2004 the Board of Directors and stockholders of the Company approved an amendment to the Certificate of Incorporation filed with the State of Delaware. Under the terms of the amended articles of incorporation, the authorized common stock increased to 110,000,000 shares and the authorized preferred stock increased to 38,582,000 shares with 8,682,000 shares designated as Series A, 10,600,000 shares designated as Series B, 13,250,000 shares designated as Series C, 1,250,000 shares designated as Series C-1, and 4,800,000 shares designated as Series C-2.

Common Stock

        Holders of common stock are entitled to one vote per share on all matters to be voted upon by the stockholders of the Company. Subject to the preferences that may be applicable to any outstanding shares of preferred stock, the holders of common stock are entitled to receive ratably such dividends, if any, as may be declared by the Board of Directors. No dividends have been declared to date.

Convertible Preferred Stock

        The Company initially recorded the Series A, B, C, C-1, and C-2 convertible preferred stock ("preferred stock") at their fair values on the date of issuance, net of issuance costs. A redemption event will only occur upon the liquidation, winding up, change in control or sale of substantially all of the assets of the Company. As the redemption event is outside of the control of the Company, all shares of preferred stock have been presented outside of permanent equity in accordance with EITF topic D-98, Classification and Measurement of Redeemable Securities . Further, the Company has also elected not to adjust the carrying values of the preferred stock to the redemption value of such shares, since it is uncertain whether or when a redemption event will occur. Subsequent adjustments to increase the carrying values to the redemption values will be made if it becomes probable that such redemption will occur.

        Preferred stockholders are entitled to receive noncumulative dividends at the rate of 8% of the respective liquidation preference per share (as converted) per annum, when and if declared by the Board of Directors, payable in preference to common stock dividends. As of December 31, 2004, no dividends have been declared or paid by the Company.

        In the event of any liquidation, dissolution, or winding up of the Company, the holders of Series A, B, C, C-1, and C-2 preferred stock would be entitled to receive, prior to and in preference to any distribution of any of the assets or surplus funds of the Company to the common stockholders, $1.00, $2.60, $4.80, $4.80, and $4.80 per share, respectively, and all declared but unpaid dividends on the preferred stock. Following the payment of this liquidation preference, any remaining assets or surplus funds would be distributed to the holders of preferred stock and common stock on a pro rata basis until the holders of Series A, B, C, C-1, and C-2 preferred stock have received a total of $3.00, $4.60, $8.49, $8.49, and $8.49 per share, respectively. Any remaining assets would be distributed to the common stockholders.

        Series A, B, C, C-1 and C-2 preferred stock is convertible into common stock at the option of the holder at the then-effective conversion price. The initial conversion price per share of Series A, B, C, C-1 and C-2 preferred stock is $1.00, $2.60, $4.80, $4.80, and $4.80, respectively, and is subject to adjustment as specified in the Certificate of Incorporation. Each share of preferred stock will convert upon the closing of an initial public offering with an implied pre-money valuation of at least

F-21



$150.0 million and aggregate cash proceeds in excess of $40 million or upon the vote by holders of at least 85% of the then outstanding preferred stock.

        Under the terms of the amended Certificate of Incorporation, the conversion rights of the preferred stock are amended to include a provision that adjusts the conversion ratio of Series B, C, C-1 and C-2 preferred stock based on the Pre-Money Valuation of the Company immediately prior to an initial public offering ("IPO").

        "Pre-Money Valuation" shall be the product of the IPO price per share multiplied by the number of shares of common stock outstanding immediately prior to the issuance of IPO stock and assuming the exercise of all outstanding options and warrants and the conversion of all outstanding preferred stock into common stock after giving effect to antidilution adjustments, if any, as specified in the Certificate of Incorporation.

        As of December 31, 2004, (i) an IPO with a Pre-Money Valuation of greater than or equal to $234.0 million would not have caused any adjustments to the conversion ratios of the Series B, C, C-1 or C-2 preferred stock, (ii) an IPO with a Pre-Money Valuation of less than $234.0 million would have caused an adjustment to the conversion ratios of the Series C, C-1 and C-2 preferred stock and (iii) an IPO with a Pre-Money Valuation of less than $158.0 million would have caused an adjustment to the conversion ratios of the Series B, C, C-1 and C-2 preferred stock.

        If the conversion ratios are adjusted in accordance with the above terms, the Company will record a deemed dividend associated with the conversion of the preferred stock to reflect the fair value of the additional shares issued upon such conversion. The deemed dividend will be recorded in the period in which the additional shares are issued and will increase the net loss allocable to common stockholders in the calculation of basic and diluted net loss per common share allocable to common stockholders.

        The holders of each share of preferred stock shall be entitled to the number of votes equal to the number of shares of common stock into which such shares of preferred stock could be converted.

Incentive Stock Plans

        The Company's 1998 Stock Plan (the "1998 Plan") was adopted by the Board of Directors in February 1998 and provides for the issuance of common stock, purchase rights, and granting of options to employees, officers, directors, and consultants of the Company. The Company grants shares of common stock for issuance under the 1998 Plan at no less than the estimated fair value of the underlying stock on the grant date, as determined by the Board of Directors. Options granted and shares underlying stock purchase rights issued under the 1998 Plan vest over periods determined by the Board of Directors, generally four years, and expire no more than 10 years after the date of grant. Stock that is purchased prior to vesting is subject to the Company's right of repurchase, which lapses over the vesting period.

        The Board of Directors and stockholders initially authorized 3,085,000 shares of common stock for issuance under the 1998 Plan. From that date through June 2004, the board of directors and stockholders approved increases in the number of shares of common stock authorized for issuance pursuant to the 1998 Plan aggregating 7,256,350 shares which is net of 472,650 shares allocated to the 2001 Stock Plan (the "2001 Plan").

F-22



        In October 2001, the Company's Board of Directors adopted the 2001 Plan under which shares may be allocated for grant as either incentive stock options or nonstatutory stock option grants directly from available shares authorized and reserved for issuance under the 1998 Plan. The options vest as determined by the Board of Directors and expire no more than 10 years after the date of grant. All 442,650 options granted under the 2001 Plan during 2001 were allocated from the shares reserved under the 1998 Plan. The terms of the 2001 Plan are substantially consistent to the 1998 Plan. In April 2002, the Board of Directors approved 471,000 shares of common stock to be reserved for issuance under the 2001 Plan. In April 2003, the management allocated 30,000 shares to the 2001 plan from shares reserved under the 1998 plan. In June 2003, the Board of Directors approved an additional 500,000 shares of common stock to be reserved for issuance under the 2001 Plan.

        Effective in October 2001, any unvested shares repurchased by the Company after that date at their original issue prices will become available for future grant in both plans. As of December 31, 2003 and 2004, 233,439 and 114,900 shares, respectively, of common stock purchased upon option exercises are subject to repurchase.

        In accordance with Emerging Issues Task Force ("EITF") 00-23, Issues Related to the Accounting for Stock Compensation Under APB Opinion No. 25, and FIN No. 44, shares purchased after March 2002 under an early exercise of stock options are not deemed to be issued until those shares vest. Since March 2002, the Company has issued an aggregate of 28,400 shares of common stock pursuant to the early exercise of stock options. At December 31, 2003 and 2004, there were zero and 9,149, respectively, of these shares issued subject to the Company's right to repurchase at the original purchase price of $0.60 per share. The amounts received in exchange for these shares have been recorded as a liability for early exercise of stock options in the accompanying consolidated balance sheets and will be transferred into common stock and additional paid-in capital as the shares vest.

F-23



        Activity under the Company's stock option plans is summarized as follows:

 
   
  Options Outstanding
 
  Shares
Available
for Grant

  Number
of Shares

  Weighted-
Average
Exercise
Price

Balance at December 31, 2001   366,900   2,656,984   $ 0.54
  Options authorized   2,750,000      
  Options granted   (2,559,300 ) 2,559,300   $ 0.60
  Options exercised     (88,125 ) $ 0.41
  Options canceled   279,375   (279,375 ) $ 0.59
  Shares repurchased   16,667     $ 0.10
   
 
     
Balance at December 31, 2002   853,642   4,848,784   $ 0.57
  Options authorized   1,800,000      
  Options granted   (1,474,400 ) 1,474,400   $ 0.60
  Options exercised     (95,831 ) $ 0.47
  Options canceled   402,786   (402,786 ) $ 0.59
  Shares repurchased   34,855     $ 0.10
   
 
     
Balance at December 31, 2003   1,616,883   5,824,567   $ 0.58
  Options authorized   750,000     $
  Options granted   (2,026,100 ) 2,026,100   $ 0.62
  Options exercised     (474,752 ) $ 0.63
  Options canceled   235,249   (235,249 ) $ 0.47
   
 
     
Balance at December 31, 2004   576,032   7,140,666   $ 0.60
   
 
     

        The following table summarizes information about stock options outstanding and exercisable at December 31, 2003:

 
  Options Outstanding and Exercisable
Range of
Exercise Prices

  Number
of Shares

  Weighted-
Average
Exercise
Price

  Weighted-Average
Remaining
Contractual
Life

 
   
   
  (In years)

$0.10   149,000   $ 0.10   4.93
$0.30   187,666   $ 0.30   6.25
$0.60   5,487,901   $ 0.60   8.37
   
         
    5,824,567   $ 0.58   8.21
   
         

F-24


        The following table summarizes information about stock options outstanding and exercisable at December 31, 2004:

 
  Options Outstanding and Exercisable
Range of
Exercise Prices

  Number
of Shares

  Weighted-
Average
Exercise
Price

  Weighted-Average
Remaining
Contractual
Life

 
   
   
  (In years)

$0.10   60,000   $ 0.10   4.26
$0.30   75,333   $ 0.30   5.29
$0.60   6,763,833   $ 0.60   7.91
$0.75   145,500   $ 0.75   9.77
$0.85   96,000   $ 0.85   9.94
   
         
    7,140,666   $ 0.60   7.91
   
         

        The weighted-average fair value of options granted during the years ended December 31, 2002, 2003, and 2004 was $0.12, $0.17, and $1.87, respectively.

        The Company has granted common stock options to non-employees in exchange for services. These options have vesting periods ranging from immediate vesting to 48 months. The Company granted options to non-employees to purchase 114,000, 88,750 and 63,500 shares in 2002, 2003 and 2004, respectively. The Black-Scholes option pricing model is used to calculate the fair value of the options as they vest. The Company has recognized $54,286, $36,098, and $194,474 of expense for the estimated fair value of these options for the years ended December 31, 2002, 2003, and 2004, respectively.

        The Company has also reserved 75,000 shares of its common stock related to a performance stock option for another executive as a part of an employment agreement. Under the terms of the agreement, the shares will vest at the end of the vesting period. In addition, when certain milestones have been fully achieved within the time period specified in the agreement, vesting of the options will accelerate. As of December 31, 2004, no milestones have been achieved.

Warrants

        The Company has outstanding warrants to purchase preferred and common stock at December 31, 2004 as follows:

 
  Shares
  Exercise
Price

  Expiration
Preferred Series A   48,743   $ 1.00   August 2005
Common Stock   130,000   $ 1.00   April 2008
Preferred Series B   71,538   $ 2.60   December 2009
Common Stock   175,000   $ 4.00   May 2010
Preferred Series C   486,750   $ 4.80   July 2010
Preferred Series C   3,000   $ 4.80   June 2013
Preferred Series C   1,435   $ 4.80   June 2014

F-25


Notes Receivable from Officers

        In June 1999, the Company issued notes receivable to an officer to finance the purchase of shares of the Company's common stock. The principal amount of the notes totaled $32,468, the notes bore interest at 5.3% per annum, were full recourse, were secured by shares of the Company's common stock held by the officer and had maturity dates of June 2003 and June 2005. The officer repaid the outstanding balance on the loan during 2003.

        In April 2000, the Company issued a note receivable to an officer to finance the purchase of shares of the Company's common stock. The principal amount of the note is $90,000 and the note bears interest at 6.6% per annum, is full recourse, is secured by shares of the Company's common stock held by the employee, and has a maturity date of April 2004. In 2004 the Company forgave the total outstanding balance of the note. The Company has recorded the forgiveness and the tax portion of the imputed interest as a charge to general and administrative expense.

        In May 2000, the Company issued a note receivable to an officer to finance the purchase of shares of the Company's common stock. The principal amount of the note is $135,000 and the note bears interest at 6.6% per annum, is full recourse, is secured by shares of the Company's common stock held by the employee, and has a maturity date of May 2005. Principal and interest on the note are not forgivable.

Reserved Shares

        The Company had reserved shares of common stock for future issuances as follows:

 
  December 31,
2003

  December 31, 2004
Common stock issuable under warrants   305,000   305,000
Conversion of preferred stock issuable under warrants   610,031   611,466
Conversion of Series A preferred stock   8,467,500   8,467,500
Conversion of Series B preferred stock   9,690,771   9,690,771
Conversion of Series C preferred stock   12,500,000   12,500,000
Conversion of Series C-1 preferred stock   1,250,000   1,250,000
Conversion of Series C-2 preferred stock     2,916,667
Stock option plans   7,441,450   7,716,698
   
 
    40,264,752   43,458,102
   
 

11. Income Taxes

        As of December 31, 2004, the Company had federal net operating loss carryforwards of approximately $76.3 million. The Company also had federal research and development tax credit carryforwards of approximately $1.1 million. The net operating loss and tax credit carryforwards will expire at various dates beginning in 2018, if not utilized. As of December 31, 2004, the Company had a state net operating loss carryforward of approximately $36.9 million, which expires beginning in 2008.

        Utilization of the net operating loss and tax credit carryforwards may be subject to a substantial annual limitation due to the ownership change limitations provided by the Internal Revenue Code of

F-26



1986, as amended, that are applicable if the Company experiences an "ownership change," which may occur, for example, as a result of the Company's initial public offering and other sales of the Company's stock, and similar state provisions. The annual limitation may result in the expiration of net operating losses and credits before utilization.

        As of December 31, 2004 and 2003, the Company had deferred tax assets of approximately $38,547,000 and $31,818,000, respectively. Realization of the deferred tax assets is dependent upon future taxable income, if any, the amount and timing of which are uncertain. Accordingly, the net deferred tax assets have been fully offset by a valuation allowance. The net valuation allowance increased by approximately $9,891,000 and $6,729,000 during the years ended December 31, 2003 and 2004, respectively.

        The income tax benefit recognized differs from the amount computed by applying the statutory income tax rate of 34% to pretax loss as follows:

 
  Year ended December 31,
 
 
  2002
  2003
  2004
 
Statutory rate   $ (6,521,968 ) $ (6,461,754 ) $ (6,980,268 )
Current year net operating losses and temporary differences, no tax benefit recognized     6,493,187     6,426,884     6,737,902  
Other permanent differences     28,781     34,870     242,366  
   
 
 
 
    $   $   $  
   
 
 
 

        Deferred income taxes reflect the net tax effects of loss and credit carryforwards and temporary differences between the carrying amounts of assets and liabilities for financial reporting purposes and the amounts used for income tax purposes. Significant components of the Company's deferred tax assets for federal and state income taxes are as follows:

 
  December 31,
 
 
  2003
  2004
 
Deferred tax assets:              
  Net operating loss carryforwards   $ 23,130,000   $ 28,139,000  
  Deferred revenue     2,542,000     4,981,000  
  Capitalized research costs     1,682,000     1,962,000  
  Property and equipment     263,000     263,000  
  Book/tax difference in depreciation     760,000     960,000  
  Accrued liabilities     151,000     177,000  
  Federal and state research credit carryforwards     3,290,000     2,065,000  
   
 
 
Gross deferred tax assets     31,818,000     38,547,000  
Valuation allowance     (31,818,000 )   (38,547,000 )
   
 
 
Net deferred tax assets   $   $  
   
 
 

F-27


12. Guarantees and Indemnifications

        In November 2002, the FASB issued Interpretation No. 45, " Guarantor's Accounting and Disclosure Requirements for Guarantees, including Indirect Guarantees of Indebtedness of Others " ("FIN 45"). FIN 45 requires that upon issuance of a guarantee, the guarantor must recognize a liability for the fair value of the obligations it assumes under that guarantee.

        As permitted under Delaware law and in accordance with the Company's Bylaws, the Company indemnifies its officers and directors for certain events or occurrences, subject to certain limits, while the officer or director is or was serving at the Company's request in such capacity. The Company terminates its indemnification agreements with its officers and directors upon the termination of their employment, but the termination will not affect claims for indemnification relating to events occurring prior to the effective date of termination. The maximum amount of potential future indemnification is unlimited; however, the Company's director and officer insurance policy limits the Company's exposure and may enable the Company to recover a portion of any future amounts paid. Accordingly, the Company believes that the fair value of these indemnification agreements is minimal. Therefore, the Company has not recorded any liabilities for these agreements as of December 31, 2003 or 2004.

13. Event (Unaudited) Subsequent to Date of Independent Registered Public Accounting Firm's Opinion

        In April 2005, the Company entered into a licensing agreement with BMS in which the Company obtained worldwide exclusive and non-exclusive diagnostic and therapeutic licenses, including rights to sublicense, to SNS-032 and any related compounds active against CDK-1, -2, -4, -7 and -9 and are covered by licensed intellectual property.

        The agreement provides to BMS an upfront payment of $8 million payable in 1,666,667 shares of Sunesis Series C-2 preferred stock, and milestone payments totaling up to $78 million for beginning Phase I, Phase II and Phase III clinical testing, and for filing NDAs and receiving regulatory approval in the United States, Europe and Japan as well as for achieving certain commercial milestones. Milestone payments are distributed among IV and oral formulations and various cancer indications. We may pay some of these milestone payments in equity or a mixture of cash and equity, rather than entirely in cash.

        The agreement also provides for royalty payments to BMS at rates that are based on total annual net sales. Royalty obligations under the agreement continue on a country-by-country basis until the later of (1) expiration of all patents that are owned by us or exclusively licensed to us (whether by BMS or a third party) that cover a licensed product, (2) 10 years following the first commercial sale of a licensed product or (3) expiration of all applicable data exclusivity with respect to a licensed product.

        After completion of any Phase II clinical trial with SNS-032 or other licensed product under a U.S. IND, should we desire to sublicense our rights under the agreement, BMS will have the first right to negotiate with us for such sublicense. If Sunesis and BMS do not reach agreement within a designated length of time, then we are free to sublicense to any third party provided the financial terms are not less favorable than those offered to BMS. We cannot grant a sublicense to any third party before the completion of such Phase II clinical trial unless we receive BMS's consent.

        The agreement may be terminated by BMS for our uncured breach (other than a diligence breach) or bankruptcy. BMS may terminate this agreement on a country by country basis for our uncured failure to use commercially reasonable efforts to develop and/or commercialize at least one licensed compound or licensed product in a particular country or territory. Further, if such uncured failure occurs in certain countries, BMS may terminate this agreement as to entire designated territories. BMS may also terminate this agreement if we develop or market a competitive product within certain designated time frames. We may terminate this agreement with respect to a specific licensed product in a particular country without cause but with a specified notice period. We may also terminate this agreement for BMS's uncured breach.

F-28


GRAPHIC



PART II
INFORMATION NOT REQUIRED IN PROSPECTUS


ITEM 13. Other Expenses of Issuance and Distribution.

        The following table sets forth the costs and expenses, other than underwriting discounts and commissions, payable by Sunesis Pharmaceuticals, Inc. in connection with the sale of the common stock being registered hereby. All amounts are estimates except the Securities and Exchange Commission Registration Fee and the NASD filing fee.

 
  Amount to be Paid
Securities and Exchange Commission registration fee   $ 10,152
NASD filing fee     9,125
Nasdaq National Market initial listing fee     100,000
Blue sky qualification fees and expenses     10,000
Printing and engraving expenses     250,000
Legal fees and expenses     800,000
Accounting fees and expenses     550,000
Transfer agent and registrar fees     5,000
Miscellaneous     15,723
   
Total   $ 1,750,000
   


ITEM 14. Indemnification of Directors and Officers.

        As permitted by Section 145 of the Delaware General Corporation Law, the amended and restated bylaws of the registrant provide that (i) the registrant is required to indemnify its directors and officers to the fullest extent not prohibited by the Delaware General Corporation Law, (ii) the registrant may, in its discretion, indemnify its other employees and agents as set forth in the Delaware General Corporation Law, (iii) the registrant is required to advance all expenses incurred by its directors and officers in connection with certain legal proceedings, (iv) the rights conferred in the bylaws are not exclusive, and (v) the registrant is authorized to enter into indemnification agreements with its directors, officers, employees and agents. Article IX of the amended and restated bylaws provides for the indemnification of officers, directors and third parties acting on our behalf if such person acted in good faith and in a manner reasonably believed to be in and not opposed to our best interest and, with respect to any criminal action or proceeding, the indemnified party had no reason to believe his or her conduct was unlawful.

        Article VI of the amended and restated certificate of incorporation of the registrant provides for the indemnification of directors to the fullest extent permissible under Delaware law.

        The registrant has entered into agreements with its directors and officers that require the registrant to indemnify such persons against expenses, judgments, fines, settlements, and other amounts that any such person becomes legally obligated to pay (including with respect to a derivative action) in connection with any proceeding, whether actual or threatened, to which such person may be made a party by reason of the fact that such person is or was a director or officer of the registrant or any of its affiliates. The indemnification agreements also set forth certain procedures that will apply in the event of a claim for indemnification thereunder. At present, no litigation or proceeding is pending that involves a director or officer of the registrant regarding which indemnification is sought, nor is the registrant aware of any threatened litigation that may result in claims for indemnification.

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        The underwriting agreement filed as Exhibit 1.1 to this registration statement provides for indemnification under certain circumstances by the underwriters of the registrant, its directors, and certain of its officers for liabilities arising under the Securities Act of 1933, as amended, or otherwise.

        The registrant maintains a directors' and officers' insurance and registrant reimbursement policy. The policy insures directors and officers against unindemnified losses arising from certain wrongful acts in their capacities as directors and officers and reimburses the registrant for those losses for which the registrant has lawfully indemnified the directors and officers. The policy contains various exclusions, none of which apply to this offering.

        The Eighth Amended and Restated Investor Rights Agreement between the registrant and certain investors provides for cross-indemnification in connection with registration of the registrant's common stock on behalf of such investors.

        See also the undertakings set out in response to Item 17.


ITEM 15. Recent Sales of Unregistered Securities.

        From January 1, 2002 through December 31, 2004, the registrant has issued and sold the following unregistered securities:

        1.     The registrant sold an aggregate of 658,708 shares of its common stock to employees, directors and consultants for cash consideration in the aggregate amount of $319,680 upon the exercise of stock options and stock awards, 51,522 shares of which have been repurchased.

        2.     The registrant granted stock options and stock awards to employees, directors and consultants under its 1998 Stock Option Plan and 2001 Stock Option Plan covering an aggregate of 6,059,800 shares of common stock, each with exercise prices ranging from $0.60 to $0.85 per share. Of these, options covering an aggregate of 917,410 were cancelled without being exercised.

        3.     In December 2002, the registrant issued and sold an aggregate of 1,250,000 shares of Series C-1 convertible preferred stock at a purchase price per share of $4.80 to Biogen, Inc., which represented that it was an accredited investor, for an aggregate purchase price of $6,000,000.

        4.     In August 2004, the registrant issued and sold an aggregate of 2,916,667 shares of Series C-2 convertible preferred stock at a purchase price per share of $4.80 to Biogen Idec, which represented that it was an accredited investor, for an aggregate purchase price of $14,000,000.

        5.     In June 2003, the registrant issued a warrant to purchase 3,000 shares of our Series C preferred stock at an exercise price per share of $4.80 to General Electric Capital Corporation, which represented that it was an accredited investor, for an aggregate exercise price of $14,400.

        6.     In June 2004, the registrant issued a warrant to purchase 1,435 shares of our Series C preferred stock at an exercise price per share of $4.80 to General Electric Capital Corporation, which represented that it was an accredited investor, for an aggregate exercise price of $6,888.

        The registrant claimed exemption from registration under the Securities Act for the sales and issuances of securities in the transactions described in paragraphs (1) and (2) above under Section 4(2) of the Securities Act in that such sales and issuances did not involve a public offering or under Rule 701 promulgated under the Securities Act, in that they were offered and sold either pursuant to written compensatory plans or pursuant to a written contract relating to compensation, as provided by Rule 701.

        The registrant claimed exemption from registration under the Securities Act for the sale and issuance of securities in the transactions described in paragraphs (3) through (6) by virtue of Section 4(2) and/or Regulation D promulgated thereunder as transactions not involving any public offering. All of the purchasers of unregistered securities for which the registrant relied on Section 4(2)

II-2



and/or Regulation D represented that they were accredited investors as defined under the Securities Act. The registrant claimed such exemption on the basis that (a) the purchasers in each case represented that they intended to acquire the securities for investment only and not with a view to the distribution thereof and that they either received adequate information about the registrant or had access, through employment or other relationships, to such information and (b) appropriate legends were affixed to the stock certificates issued in such transactions.


ITEM 16. Exhibits and Financial Statement Schedules.

(a)
Exhibits.


EXHIBIT INDEX

Exhibit
Number

  Description
1.1*   Form of Underwriting Agreement.
3.1**   Eighth Amended and Restated Certificate of Incorporation of the Registrant (Delaware).
3.2**   Form of Amendment to Eighth Amended and Restated Certificate of Incorporation.
3.3**   Amended and Restated Certificate of Incorporation of the Registrant (Delaware) to be effective prior to the closing of the offering.
3.4**   Amended Bylaws of the Registrant as currently in effect.
3.5**   Amended and Restated Bylaws of the Registrant to be effective upon the closing of the offering.
4.1**   Specimen Common Stock certificate of the Registrant.
5.1*   Opinion of Latham & Watkins LLP.
10.1**   1998 Stock Option Plan and Form of Stock Option Agreement.
10.2**   2001 Stock Option Plan and Form of Stock Option Agreement.
10.3**   2005 Equity Incentive Award Plan and Form of Stock Option Agreement.
10.4**   Employee Stock Purchase Plan and Enrollment Form.
10.5**   Form of Indemnification Agreement for directors and executive officers.
10.6**   Employment Agreement, dated April 9, 1998, by and between the Registrant and James A. Wells.
10.7**   Modified Employment Agreement, dated April 15, 2003, by and between the Registrant and Daryl B. Winter.
10.8**   Employment Agreement, dated April 18, 2003, by and between the Registrant and Daniel C. Adelman.
10.9**   Employment Agreement, dated December 1, 2003, by and between the Registrant and Eric H. Bjerkholt.
10.10**   First Amendment to Employment Agreement, dated June 21, 2004, by and between the Registrant and Eric H. Bjerkholt.
10.11**   Employment Agreement, dated December 1, 2003, by and between the Registrant and Daniel N. Swisher, Jr.
10.12**   Employment Agreement, dated December 1, 2003, by and between the Registrant and James W. Young.
10.13**   Promissory Note, dated April 13, 2000, by and between the Registrant and Daryl B. Winter, for principal amount of $90,000.
     

II-3


10.14**   Promissory Note, dated April 13, 2000, by and between the Registrant and Daryl B. Winter, for principal amount of $100,000 and Employment Agreement, dated April 5, 2000, by and between the Registrant and Daryl B. Winter, defining the terms of the Promissory Note.
10.15**   Promissory Note, dated May 17, 2000, by and between the Registrant and James W. Young, for principal amount of $135,000.
10.16**   Promissory Note, dated December 18, 2002, by and between the Registrant and Biogen, Inc., for principal amount of up to $4,000,000.
10.17**   Eighth Amended and Restated Investor Rights Agreement, dated August 30, 2004, by and among the Registrant and certain stockholders and warrant holders.
10.18**   Warrant, dated April 9, 1998, by and between the Registrant and James A. Wells.
10.19**   Warrant, dated December 1, 1999, by and between the Registrant and Three Crowns Capital (Bermuda) Limited.
10.20**   Warrant, dated July 7, 2000, by and between the Registrant and Broadview Ltd. Limited and Amendment No. 1 thereto, dated December 2004.
10.21**   Warrant, dated June 11, 2003, by and between the Registrant and General Electric Capital Corporation.
10.22   Warrant, dated June 21, 2004, by and between the Registrant and General Electric Capital Corporation and Amendment No. 1 thereto, dated December 16, 2004.
10.23**   Lease, dated May 12, 2000, by and between Registrant and ARE-Technology Centers SSF, LLC, for office space located at 341 Oyster Point Boulevard, South San Francisco, California.
10.24**   First Amendment to Lease Agreement, dated December 20, 2000, by and between the Registrant and ARE-Technology Centers SSF, LLC for office space located at 341 Oyster Point Boulevard, South San Francisco, California.
10.25   Master Security Agreement, dated June 15, 2000 and amendments thereto, by and between the Registrant and General Electric Capital Corporation, Negative Pledge Agreement, dated May 17, 2002, and Form of Promissory Note.
10.26**†   Collaboration Agreement, dated December 18, 2002, by and between the Registrant and Biogen, Inc. (now Biogen Idec MA Inc.).
10.27**†   Amendment No. 1 to Collaboration Agreement, dated June 17, 2003, between the Registrant and Biogen Idec MA Inc.
10.28**†   Amendment No. 2 to Collaboration Agreement, dated September 17, 2003, between the Registrant and Biogen Idec MA Inc.
10.29†   Collaboration Agreement, dated August 25, 2004, between the Registrant and Biogen Idec MA Inc.
10.30**†   Collaboration Agreement, dated May 3, 2002, by and between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
10.31**†   Amendment to Collaboration Agreement, dated December 15, 2002, between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
10.32**†   Notice of Extension and Second Amendment to Collaboration Agreement, dated December 15, 2003, between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
10.33†   Third Amendment to Collaboration Agreement, dated December 22, 2004, between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
     

II-4


10.34**†   License and Collaboration Agreement, dated February 12, 2003, by and between the Registrant and Merck & Co., Inc.
10.35**†   License and Research Collaboration Agreement, dated July 22, 2004, by and between the Registrant and Merck & Co., Inc.
10.36†   License Agreement, dated October 14, 2003, by and between the Registrant and Dainippon Pharmaceutical Co., Ltd.
10.37*†   License Agreement, dated as of April 27, 2005, between the Registrant and Bristol-Meyers Squibb Company.
10.38   Stock Purchase Agreement, dated as of April 27, 2005, between the Registrant and Bristol-Meyers Squibb Company.
10.39   Amendment to Eighth Amended and Restated Investor Rights Agreement, dated as of April 27, 2005, among the Registrant and Investors listed on the signature pages thereto.
23.1   Consent of Independent Registered Public Accounting Firm.
23.2*   Consent of Latham & Watkins LLP (See Exhibit 5.1).
24.1**   Power of Attorney (see page II-6 of registration statement on Form S-1 filed on December 23, 2004).

*
To be filed by amendment.

**
Previously filed.

Portions of the exhibit have been omitted pursuant to a request for confidential treatment. The omitted information has been filed separately with the Securities and Exchange Commission.

(b)
Schedules

        All schedules have been omitted because they are inapplicable or the requested information is shown in the financial statements of the Registrant or the notes thereto.


ITEM 17. Undertakings.

        The undersigned registrant hereby undertakes to provide to the underwriters at the closing specified in the underwriting agreement certificates in such denominations and registered in such names as required by the underwriters to permit prompt delivery to each purchaser.

        Insofar as indemnification by the registrant for liabilities arising under the Securities Act may be permitted to directors, officers and controlling persons of the registrant pursuant to the provisions described in Item 14 or otherwise, the registrant has been advised that in the opinion of the Securities and Exchange Commission such indemnification is against public policy as expressed in the Securities Act and is, therefore, unenforceable. In the event that a claim for indemnification against such liabilities (other than the payment by the registrant of expenses incurred or paid by a director, officer or controlling person of the registrant in the successful defense of any action, suit or proceeding) is asserted by such director, officer or controlling person in connection with the securities being registered, the registrant will, unless in the opinion of its counsel the matter has been settled by controlling precedent, submit to a court of appropriate jurisdiction the question whether such indemnification by it is against public policy as expressed in the Securities Act and will be governed by the final adjudication of such issue.

II-5



        The undersigned registrant hereby undertakes that:

        (1)   For purposes of determining any liability under the Securities Act, the information omitted from the form of prospectus filed as part of this registration statement in reliance upon Rule 430A and contained in the form of prospectus filed by the registrant pursuant to Rule 424(b)(1) or (4) or 497(h) under the Securities Act shall be deemed to be part of this registration statement as of the time it was declared effective.

        (2)   For the purpose of determining any liability under the Securities Act, each post-effective amendment that contains a form of prospectus shall be deemed to be a new registration statement relating to the securities offered therein, and the offering of such securities at that time shall be deemed to be the initial bona fide offering thereof.

II-6



SIGNATURES

        Pursuant to the requirements of the Securities Act of 1933, the registrant has duly caused this amendment to the registration statement to be signed on its behalf by the undersigned, thereunto duly authorized, in South San Francisco, State of California, on the 29th day of April, 2005.

    SUNESIS PHARMACEUTICALS, INC.

 

 

By:

 

/s/  
DANIEL N. SWISHER, JR.       
Daniel N. Swisher, Jr.
Chief Executive Officer

        Pursuant to the requirements of the Securities Act of 1933, this Registration Statement has been signed by the following persons in the capacities and on the dates indicated:

Signature
  Title
  Date

 

 

 

 

 
*
James W. Young, Ph.D.
  Executive Chairman of the Board   April 29, 2005

/s/  
DANIEL N. SWISHER, JR.       
Daniel N. Swisher, Jr.

 

Chief Executive Officer and Director
(Principal Executive Officer)

 

April 29, 2005

/s/  
ERIC H. BJERKHOLT       
Eric H. Bjerkholt

 

Senior Vice President and Chief Financial Officer
(Principal Financial Officer and Principal Accounting Officer)

 

April 29, 2005

*

Anthony B. Evnin, Ph.D.

 

Director

 

April 29, 2005

*

Stephen P.A. Fodor, Ph.D.

 

Director

 

April 29, 2005

*

Steven D. Goldby

 

Director

 

April 29, 2005

*

Russell C. Hirsch, M.D., Ph.D.

 

Director

 

April 29, 2005
         

II-7



*

Jonathan S. Leff

 

Director

 

April 29, 2005

*

James A. Wells, Ph.D.

 

President, Chief Scientific Officer and Director

 

April 29, 2005

*By:

 

/s/  
DANIEL N. SWISHER, JR.       
Daniel N. Swisher, Jr.
Attorney-in-Fact

 

 

 

 

II-8



EXHIBIT INDEX

Exhibit
Number

  Description
1.1*   Form of Underwriting Agreement.
3.1**   Eighth Amended and Restated Certificate of Incorporation of the Registrant (Delaware).
3.2**   Form of Amendment to Eighth Amended and Restated Certificate of Incorporation.
3.3**   Amended and Restated Certificate of Incorporation of the Registrant (Delaware) to be effective prior to the closing of the offering.
3.4**   Amended Bylaws of the Registrant as currently in effect.
3.5**   Amended and Restated Bylaws of the Registrant to be effective upon the closing of the offering.
4.1**   Specimen Common Stock certificate of the Registrant.
5.1*   Opinion of Latham & Watkins LLP.
10.1**   1998 Stock Option Plan and Form of Stock Option Agreement.
10.2**   2001 Stock Option Plan and Form of Stock Option Agreement.
10.3**   2005 Equity Incentive Award Plan and Form of Stock Option Agreement.
10.4**   Employee Stock Purchase Plan and Enrollment Form.
10.5**   Form of Indemnification Agreement for directors and executive officers.
10.6**   Employment Agreement, dated April 9, 1998, by and between the Registrant and James A. Wells.
10.7**   Modified Employment Agreement, dated April 15, 2003, by and between the Registrant and Daryl B. Winter.
10.8**   Employment Agreement, dated April 18, 2003, by and between the Registrant and Daniel C. Adelman.
10.9**   Employment Agreement, dated December 1, 2003, by and between the Registrant and Eric H. Bjerkholt.
10.10**   First Amendment to Employment Agreement, dated June 21, 2004, by and between the Registrant and Eric H. Bjerkholt.
10.11**   Employment Agreement, dated December 1, 2003, by and between the Registrant and Daniel N. Swisher, Jr.
10.12**   Employment Agreement, dated December 1, 2003, by and between the Registrant and James W. Young.
10.13**   Promissory Note, dated April 13, 2000, by and between the Registrant and Daryl B. Winter, for principal amount of $90,000.
10.14**   Promissory Note, dated April 13, 2000, by and between the Registrant and Daryl B. Winter, for principal amount of $100,000 and Employment Agreement, dated April 5, 2000, by and between the Registrant and Daryl B. Winter, defining the terms of the Promissory Note.
10.15**   Promissory Note, dated May 17, 2000, by and between the Registrant and James W. Young, for principal amount of $135,000.
10.16**   Promissory Note, dated December 18, 2002, by and between the Registrant and Biogen, Inc., for principal amount of up to $4,000,000.
10.17**   Eighth Amended and Restated Investor Rights Agreement, dated August 30, 2004, by and among the Registrant and certain stockholders and warrant holders.
10.18**   Warrant, dated April 9, 1998, by and between the Registrant and James A. Wells.
10.19**   Warrant, dated December 1, 1999, by and between the Registrant and Three Crowns Capital (Bermuda) Limited.
     

10.20**   Warrant, dated July 7, 2000, by and between the Registrant and Broadview Ltd. Limited and Amendment No. 1 thereto, dated December 2004.
10.21**   Warrant, dated June 11, 2003, by and between the Registrant and General Electric Capital Corporation.
10.22   Warrant, dated June 21, 2004, by and between the Registrant and General Electric Capital Corporation and Amendment No. 1 thereto, dated December 16, 2004.
10.23**   Lease, dated May 12, 2000, by and between Registrant and ARE-Technology Centers SSF, LLC, for office space located at 341 Oyster Point Boulevard, South San Francisco, California.
10.24**   First Amendment to Lease Agreement, dated December 20, 2000, by and between the Registrant and ARE-Technology Centers SSF, LLC for office space located at 341 Oyster Point Boulevard, South San Francisco, California.
10.25   Master Security Agreement, dated June 15, 2000 and amendments thereto, by and between the Registrant and General Electric Capital Corporation, Negative Pledge Agreement, dated May 17, 2002, and Form of Promissory Note.
10.26**†   Collaboration Agreement, dated December 18, 2002, by and between the Registrant and Biogen, Inc. (now Biogen Idec MA Inc.).
10.27**†   Amendment No. 1 to Collaboration Agreement, dated June 17, 2003, between the Registrant and Biogen Idec MA Inc.
10.28**†   Amendment No. 2 to Collaboration Agreement, dated September 17, 2003, between the Registrant and Biogen Idec MA Inc.
10.29†   Collaboration Agreement, dated August 25, 2004, between the Registrant and Biogen Idec MA Inc.
10.30**†   Collaboration Agreement, dated May 3, 2002, by and between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
10.31**†   Amendment to Collaboration Agreement, dated December 15, 2002, between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
10.32**†   Notice of Extension and Second Amendment to Collaboration Agreement, dated December 15, 2003, between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
10.33†   Third Amendment to Collaboration Agreement, dated December 22, 2004, between the Registrant and Johnson & Johnson Pharmaceutical Research & Development, LLC.
10.34**†   License and Collaboration Agreement, dated February 12, 2003, by and between the Registrant and Merck & Co., Inc.
10.35**†   License and Research Collaboration Agreement, dated July 22, 2004, by and between the Registrant and Merck & Co., Inc.
10.36†   License Agreement, dated October 14, 2003, by and between the Registrant and Dainippon Pharmaceutical Co., Ltd.
10.37*†   License Agreement, dated as of April 27, 2005, between the Registrant and Bristol-Meyers Squibb Company.
10.38   Stock Purchase Agreement, dated as of April 27, 2005, between the Registrant and Bristol-Meyers Squibb Company.
10.39   Amendment to Eighth Amended and Restated Investor Rights Agreement, dated as of April 27, 2005, among the Registrant and Investors listed on the signature pages thereto.
     

23.1   Consent of Independent Registered Public Accounting Firm.
23.2*   Consent of Latham & Watkins LLP (See Exhibit 5.1).
24.1**   Power of Attorney (see page II-6 of registration statement on Form S-1 filed on December 23, 2004).

*
To be filed by amendment.

**
Previously filed.

Portions of the exhibit have been omitted pursuant to a request for confidential treatment. The omitted information has been filed separately with the Securities and Exchange Commission.



QuickLinks

TABLE OF CONTENTS
PROSPECTUS SUMMARY
Corporate Information
RISK FACTORS
SPECIAL NOTE REGARDING FORWARD-LOOKING STATEMENTS
USE OF PROCEEDS
DIVIDEND POLICY
CAPITALIZATION
DILUTION
SELECTED FINANCIAL DATA
MANAGEMENT'S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS
CONVERSION OF PREFERRED STOCK AND REVERSE STOCK SPLIT
BUSINESS
MANAGEMENT
Summary Compensation Table
2004 Option Grants
CERTAIN RELATIONSHIPS AND RELATED PARTY TRANSACTIONS
PRINCIPAL STOCKHOLDERS
DESCRIPTION OF CAPITAL STOCK
U.S. FEDERAL INCOME TAX CONSEQUENCES TO NON-U.S. HOLDERS
SHARES ELIGIBLE FOR FUTURE SALE
UNDERWRITING
LEGAL MATTERS
EXPERTS
WHERE YOU CAN FIND MORE INFORMATION
INDEX TO FINANCIAL STATEMENTS
REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM
Sunesis Pharmaceuticals, Inc. Balance Sheets
Sunesis Pharmaceuticals, Inc. Statements of Operations
Sunesis Pharmaceuticals, Inc. Statements of Convertible Preferred Stock and Stockholders' Deficit
Sunesis Pharmaceuticals, Inc. Statements of Cash Flows
Sunesis Pharmaceuticals, Inc. Notes to Financial Statements
PART II INFORMATION NOT REQUIRED IN PROSPECTUS
EXHIBIT INDEX
SIGNATURES
EXHIBIT INDEX

Exhibit 10.22

 

NEITHER THIS WARRANT NOR THE SECURITIES ISSUABLE UPON EXERCISE OF THIS WARRANT HAVE BEEN REGISTERED UNDER THE SECURITIES ACT OF 1933, AS AMENDED.  NO SALE OR DISPOSITION MAY BE EFFECTED EXCEPT IN COMPLIANCE WITH RULE 144 UNDER SAID ACT OR WITHOUT AN EFFECTIVE REGISTRATION STATEMENT RELATED THERETO OR AN OPINION OF COUNSEL FOR THE HOLDER, SATISFACTORY TO THE COMPANY, THAT SUCH REGISTRATION IS NOT REQUIRED UNDER THE ACT OR RECEIPT OF A NO-ACTION LETTER FROM THE SECURITIES AND EXCHANGE COMMISSION.

 

WARRANT TO PURCHASE 1,435 SHARES OF SERIES C-1 PREFERRED STOCK

 

June 21, 2004

 

THIS CERTIFIES THAT, for value received, General Electric Capital Corporation (“Holder”) is entitled to subscribe for and purchase One Thousand Four Hundred Thirty Five (1,435) shares of the fully paid and nonassessable Series C-1 Preferred Stock (the “Shares” or the “Preferred Stock”) of Sunesis Pharmaceuticals Incorporated, a Delaware corporation (the “Company”), at the Warrant Price (as hereinafter defined), subject to the provisions and upon the terms and conditions hereinafter set forth.  As used herein, the term “Series C-1 Preferred Stock” shall mean the Company’s presently authorized Series C-1 Preferred Stock and any stock into which such Series C-1 Preferred Stock may hereafter be converted or exchanged.

 

1.                                        Warrant Price .  The Warrant Price shall initially be Four and 80/100 dollars ($4.80) per share, subject to adjustment as provided in Section 7 below.

 

2.                                        Conditions to Exercise .  The purchase right represented by this Warrant may be exercised at any time, or from time to time, in whole or in part during the term commencing on the date hereof and ending at 5:00 P.M. Pacific time 36 months after the Company’s initial public offering or on the tenth anniversary of the date of this Warrant, whichever is earlier.

 

3.                                        Method of Exercise; Payment; Issuance of Shares; Issuance of New Warrant .

 

(a)                                   Cash Exercise .  Subject to Section 2 hereof, the purchase right represented by this Warrant may be exercised by the Holder hereof, in whole or in part, by the surrender of this Warrant (with a duly executed Notice of Exercise in the form attached hereto) at the principal office of the Company (as set forth in Section 18 below) and by payment to the Company, by check, of an amount equal to the then applicable Warrant Price per share multiplied by the number of shares then being purchased.  In the event of any exercise of the rights represented by this Warrant, certificates for the shares of stock so purchased shall be in the name of, and delivered to, the Holder hereof, or as such Holder may direct (subject to the terms of transfer contained herein and upon payment by such Holder hereof of any applicable transfer taxes).  Such delivery shall be made within 30 days after exercise of the Warrant and at the Company’s expense and, unless this Warrant has been fully exercised or expired, a new Warrant having terms and conditions substantially identical to this Warrant and representing the portion of the Shares, if any, with respect to which this Warrant shall not have been exercised, shall also be issued to the Holder hereof within 30 days after exercise of the Warrant.

 



 

(b)                                  Net Issue Exercise .  Holder may also elect to receive shares equal to the value of this Warrant (or of any portion thereof remaining unexercised) by surrender of this Warrant at the principal office of the Company together with notice of such election, in which event the Company shall issue to Holder the number of shares of the Company’s Preferred Stock computed using the following formula:

 

X

=

Y (A-B)

 

 

A

 

Where X = the number of shares of Preferred Stock to be issued to Holder.

 

Y = the number of shares of Preferred Stock purchasable under this Warrant (at the date of such calculation).

 

A = the Fair Market Value of one share of the Company’s Preferred Stock (at the date of such calculation).

 

B = Warrant Price (as adjusted to the date of such calculation).

 

(c)                                   Fair Market Value .  For purposes of this Section 3, Fair Market Value of one share of the Company’s Preferred Stock shall mean:

 

(i)                                      In the event of an exercise in connection with an Initial Public Offering, the per share Fair Market Value for the Preferred Stock shall be the Offering Price at which the underwriters initially sell Common Stock to the public multiplied by the number of shares of Common Stock into which each share of Preferred Stock is then convertible; or

 

(ii)                                   The average of the closing bid and asked prices of Common Stock quoted in the Over-The-Counter Market Summary, the last reported sale price quoted on the Nasdaq National Market (“NNM”) or on any exchange on which the Common Stock is listed, whichever is applicable, as published in the Western Edition of the Wall Street Journal for the ten (10) trading days prior to the date of determination of Fair Market Value, multiplied by the number of shares of Common Stock into which each share of Preferred Stock is then convertible; or

 

(iii)                                In the event of an exercise in connection with a merger, acquisition or other consolidation in which the Company is not the surviving entity, the per share Fair Market Value for the Preferred Stock shall be the value to be received per share of Preferred Stock by all holders of the Preferred Stock in such transaction as determined by the Board of Directors; or

 

(iv)                               In any other instance, the per share Fair Market Value for the Preferred Stock shall be as determined in good faith by the Company’s Board of Directors.

 

In the event of 3(c)(iii) or 3(c)(iv), above, the Company’s Board of Directors shall prepare a certificate, to be signed by an authorized officer of the Company, setting forth in reasonable

 

2



 

detail the basis for and method of determination of the per share Fair Market Value of the Preferred Stock.  The Board will also certify to the Holder that this per share Fair Market Value will be applicable to all holders of the Company’s Preferred Stock.  Such certification must be made to Holder at least thirty (30) business days prior to the proposed effective date of the merger, consolidation, sale, or other triggering event as defined in 3(c)(iii) or 3(c)(iv).

 

(d)                                  Automatic Exercise .  To the extent this Warrant is not previously exercised, it shall be automatically exercised in accordance with Sections 3(b) and 3(c) hereof (even if not surrendered) immediately before its expiration, involuntary termination or cancellation.

 

4.                                        Representations and Warranties of Holder and the Company .

 

(a)                                   Representations and Warranties by Holder .  The Holder represents and warrants to the Company with respect to this purchase as follows:

 

(i)                                      The Holder has substantial experience in evaluating and investing in private placement transactions of securities of companies similar to the Company so that the Holder is capable of evaluating the merits and risks of its investment in the Company and has the capacity to protect its interests.

 

(ii)                                   Except for transfers to a Holder affiliate, the Holder is acquiring the Warrant and the Shares of Preferred Stock issuable upon exercise of the Warrant (collectively the “Securities”) for investment for its own account and not with a view to, or for resale in connection with, any distribution thereof.  The Holder understands that the Securities have not been registered under the Securities Act of 1933, as amended (the “Act”) by reason of a specific exemption from the registration provisions of the Act which depends upon, among other things, the bona fide nature of the investment intent as expressed herein.

 

(iii)                                The Holder acknowledges that the Securities must be held indefinitely unless subsequently registered under the Act or an exemption from such registration is available.  The Holder is aware of the provisions of Rule 144 promulgated under the Act.

 

(iv)                               The Holder is an “accredited investor” within the meaning of Regulation D promulgated under the Act.

 

(v)                                  The Holder has had an opportunity to discuss the Company’s business, management and financial affairs with its management and an opportunity to review the Company’s facilities.  The Holder understands that such discussions, as well as the written information issued by the Company, were intended to describe the aspects of the Company’s business and prospects which the Company believes to be material but were not necessarily a thorough or exhaustive description.

 

(b)                                  Company hereby represents and warrants to Holder that, [except as set forth in the schedule attached to this Warrant as Exhibit A (the “Disclosure Schedule”)], the statements in the following paragraphs of this Section 4(b) are true and correct (a) as of the date

 

3



 

hereof and (b) except where any such representation and warranty relates specifically to an earlier date, as of the date of any exercise of this Warrant.

 

(i)                                      Corporate Organization and Authority .  Company (a) is a corporation duly organized, validly existing, and in good standing in its jurisdiction of incorporation, (b) has the corporate power and authority to own and operate its properties and to carry on its business as now conducted and as proposed to be conducted; and (c) is qualified as a foreign corporation in all jurisdictions where such qualification is required.

 

(ii)                                   Corporate Power .  Company has all requisite legal and corporate power and authority to execute, issue and deliver the Warrant, to issue the Common Stock issuable upon exercise or conversion of the Warrant, and to carry out and perform its obligations under the Warrant and any related agreements.

 

(iii)                                Authorization; Enforceability .  All corporate action on the part of Company, its officers, directors and shareholders necessary for the authorization, execution, delivery and performance of its obligations under this Warrant and for the authorization, issuance and delivery of the Warrant and the Warrant Stock issuable upon exercise of the Warrant has been taken and this Warrant constitutes the legally binding and valid obligation of Company enforceable in accordance with its terms.

 

(iv)                               Valid Issuance of Warrant and Preferred Stock .  The Warrant has been validly issued and is free of restrictions on transfer other than restrictions on transfer set forth herein and under applicable state and federal securities laws.  The Preferred Stock issuable upon conversion of this Warrant, when issued, sold and delivered in accordance with the terms of this Warrant for the consideration expressed herein, will be duly and validly issued, fully paid and nonassessable, and will be free of restrictions on transfer other than restrictions on transfer under this Warrant and under applicable state and federal securities laws.  Subject to applicable restrictions on transfer, the issuance and delivery of the Warrant and the Preferred Stock issuable upon conversion of the Warrant are not subject to any preemptive or other similar rights or any liens or encumbrances except as specifically set forth in Company’s Certificate of Incorporation or this Warrant.  The offer, sale and issuance of the Warrant and Preferred Stock, as contemplated by this Warrant, are exempt from the prospectus and registration requirements of applicable United States federal and state security laws, and neither Company nor any authorized agent acting on its behalf has or will take any action hereafter that would cause the loss of such exemption.

 

(v)                                  No Conflict with Other Instruments .  The execution, delivery, and performance of this Warrant will not result in any violation of, be in conflict with, or constitute a default under, with or without the passage of time or the giving of notice (a) any provision of Company’s Certificate of Incorporation or by-laws; (b) any provision of any judgment, decree, or order to which Company is a party or by which it is bound or an event which results in the creation of any material lien, charge or encumbrance upon any material assets of Company; (c) any contract, obligation, or commitment to which Company is a party or by which it is bound; or (d) any statute, rule, or governmental regulation applicable to Company.

 

4



 

(vi)                               Capitalization .  As of recent date, the authorized capital stock of Company consists of 46,000,000 shares of [Common Stock] 0.0001 par value, of which 5,568,051 were issued and outstanding, [and 33,782,000 shares of Preferred Stock, 0.0001 par value, of which 31,908,271 were issued and outstanding].  The outstanding shares have been duly authorized and validly issued (including, without limitation, issued in compliance with applicable federal and state securities laws), are fully paid and nonassessable [and have been issued in compliance with the registration and prospectus delivery requirements of the Securities Act and the registration and qualification requirements of all applicable state securities laws, or in compliance with applicable exemptions therefrom].  Company has reserved 40,139,278 shares of Common Stock for issuance upon conversion of the Preferred Stock.  Except as set forth in Section 4(b) of the Disclosure Schedule, there are no outstanding warrants, options, conversion privileges, preemptive rights or other rights or agreements to purchase or otherwise acquire or issue any equity securities or Convertible Securities of Company, nor has the issuance of any of the aforesaid rights to acquire securities of Company been authorized.

 

(vii)                            Governmental Consents .  No consent, approval, order or authorization of, or registration, qualification, designation, declaration or filing with, any federal, state or local governmental authority on the part of Company is required in connection with the offer, sale or issuance of the Warrant (and the Preferred Stock issuable upon conversion of the Shares), or the consummation of any other transaction contemplated hereby, except for the following:  (a) the filing of a notice on Form D under the Act and (b) the compliance with other applicable state securities laws, which compliance will have occurred within the appropriate time periods therefore.  The offer, sale and issuance of the Warrant and the shares of Preferred Stock in conformity with the terms of this Warrant are exempt from the registration requirements of the Act and any applicable state laws.

 

5.                                        Legends .

 

(a)                                   Each certificate representing the Securities shall be endorsed with the following legend:

 

THESE SECURITIES HAVE NOT BEEN REGISTERED UNDER THE SECURITIES ACT OF 1933 AND MAY NOT BE TRANSFERRED UNLESS COVERED BY AN EFFECTIVE REGISTRATION STATEMENT UNDER SAID ACT, A “NO ACTION” LETTER FROM THE SECURITIES AND EXCHANGE COMMISSION WITH RESPECT TO SUCH TRANSFER, A TRANSFER MEETING THE REQUIREMENTS OF RULE 144 OF THE SECURITIES AND EXCHANGE COMMISSION, OR (IF REASONABLY REQUIRED BY THE COMPANY) AN OPINION OF COUNSEL SATISFACTORY TO THE ISSUER TO THE EFFECT THAT ANY SUCH TRANSFER IS EXEMPT FROM SUCH REGISTRATION.

 

The Company need not enter into its stock records a transfer of Securities unless the conditions specified in the foregoing legend are satisfied.  The Company may also instruct its transfer agent

 

5



 

not to allow the transfer of any of the Shares unless the conditions specified in the foregoing legend are satisfied.

 

(b)                                  Removal of Legend and Transfer Restrictions .  The legend relating to the Act endorsed on a certificate pursuant to paragraph 5(a) of this Warrant shall be removed and the Company shall issue a certificate without such legend to the Holder of the Securities if (i) the Securities are registered under the Act and a prospectus meeting the requirements of Section 10 of the Act is available or (ii) the Holder provides to the Company an opinion of counsel for the Holder reasonably satisfactory to the Company, a no-action letter or interpretive opinion of the staff of the SEC reasonably satisfactory to the Company, or other evidence reasonably satisfactory to the Company, to the effect that public sale, transfer or assignment of the Securities may be made without registration and without compliance with any restriction such as Rule 144.

 

6.                                        Condition of Transfer or Exercise of Warrant .  It shall be a condition to any transfer or exercise of this Warrant that at the time of such transfer or exercise, the Holder shall provide the Company with a representation in writing that the Holder or transferee is acquiring this Warrant and the shares of Preferred Stock to be issued upon exercise for investment purposes only and not with a view to any sale or distribution, or will provide the Company with a statement of pertinent facts covering any proposed distribution.  As a further condition to any transfer of this Warrant or any or all of the shares of Preferred Stock issuable upon exercise of this Warrant, other than a transfer registered under the Act, the Company may request a legal opinion, in form and substance satisfactory to the Company and its counsel, reciting the pertinent circumstances surrounding the proposed transfer and stating that such transfer is exempt from the registration and prospectus delivery requirements of the Act.  The Company shall not require Holder to provide an opinion of counsel if the transfer is to an affiliate of Holder.  Each certificate evidencing the shares issued upon exercise of the Warrant or upon any transfer of the shares (other than a transfer registered under the Act or any subsequent transfer of shares so registered) shall, at the Company’s option, if the Shares are not freely saleable under Rule 144(k) under the Act, contain a legend in form and substance satisfactory to the Company and its counsel, restricting the transfer of the shares to sales or other dispositions exempt from the requirements of the Act.  As further condition to each transfer, at the request of the Company, the Holder shall surrender this Warrant to the Company and the transferee shall receive and accept a Warrant, of like tenor and date, executed by the Company.

 

7.                                        Adjustment for Certain Events .  The number and kind of securities purchasable upon the exercise of this Warrant and the Warrant Price shall be subject to adjustment from time to time upon the occurrence of certain events, as follows:

 

(a)                                   Reclassification or Merger .  In case of any reclassification or change of securities of the class issuable upon exercise of this Warrant (other than a change in par value, or from par value to no par value, or from no par value to par value, or as a result of a subdivision or combination), or in case of any merger of the Company with or into another corporation (other than a merger with another corporation in which the Company is the acquiring and the surviving corporation and which does not result in any reclassification or change of outstanding securities issuable upon exercise of this Warrant), or in case of any sale of all or substantially all of the assets of the Company, the Company, or such successor or purchasing corporation, as the case may be, shall duly execute and deliver to the Holder a new Warrant (in form and substance

 

6



 

satisfactory to the Holder of this Warrant), or the Company shall make appropriate provision without the issuance of a new Warrant, so that the Holder shall have the right to receive, at a total purchase price not to exceed that payable upon the exercise of the unexercised portion of this Warrant, and in lieu of the shares of Preferred Stock theretofore issuable upon exercise of this Warrant, the kind and amount of shares of stock, other securities, money and property receivable upon such reclassification, change, merger or sale by a Holder of the number of shares of Preferred Stock then purchasable under this Warrant, or in the case of such a merger or sale in which the consideration paid consists all or in part of assets other than securities of the successor or purchasing corporation, at the option of the Holder, the securities of the successor or purchasing corporation having a value at the time of the transaction equivalent to the value of the Preferred Stock purchasable upon exercise of this Warrant at the time of the transaction.  Any new Warrant shall provide for adjustments that shall be as nearly equivalent as may be practicable to the adjustments provided for in this Section 7.  The provisions of this subparagraph (a) shall similarly apply to successive reclassifications, changes, mergers and transfers.

 

(b)                                  Subdivision or Combination of Shares .  If the Company at any time while this Warrant remains outstanding and unexpired shall subdivide or combine its outstanding shares of Preferred Stock, the Warrant Price shall be proportionately decreased and the number of Shares issuable hereunder shall be proportionately increased in the case of a subdivision and the Warrant Price shall be proportionately increased and the number of Shares issuable hereunder shall be proportionately decreased in the case of a combination.

 

(c)                                   Stock Dividends and Other Distributions .  If the Company at any time while this Warrant is outstanding and unexpired shall (i) pay a dividend with respect to Preferred Stock payable in Preferred Stock, then the Warrant Price shall be adjusted, from and after the date of determination of shareholders entitled to receive such dividend or distribution, to that price determined by multiplying the Warrant Price in effect immediately prior to such date of determination by a fraction (A) the numerator of which shall be the total number of shares of Preferred Stock outstanding immediately prior to such dividend or distribution, and (B) the denominator of which shall be the total number of shares of Preferred Stock outstanding immediately after such dividend or distribution; or (ii) make any other distribution with respect to Preferred Stock (except any distribution specifically provided for in Sections 7(a) and 7(b)), then, in each such case, provision shall be made by the Company such that the Holder of this Warrant shall receive upon exercise of this Warrant a proportionate share of any such dividend or distribution as though it were the Holder of the Preferred Stock (or Common Stock issuable upon conversion thereof) as of the record date fixed for the determination of the shareholders of the Company entitled to receive such dividend or distribution.

 

8.                                        Notice of Adjustments .  Whenever any Warrant Price or the kind or number of securities issuable under this Warrant shall be adjusted pursuant to Section 7 hereof, the Company shall prepare a certificate signed by an officer of the Company setting forth, in reasonable detail, the event requiring the adjustment, the amount of the adjustment, the method by which such adjustment was calculated, and the Warrant Price and number or kind of shares issuable upon exercise of the Warrant after giving effect to such adjustment, and shall cause copies of such certificate to be mailed (by certified or registered mail, return receipt required, postage prepaid) within thirty (30) days of such adjustment to the Holder of this Warrant as set forth in Section 18 hereof.

 

7



 

9.                                        Transferability of Warrant .  This Warrant is transferable on the books of the Company at its principal office by the registered Holder hereof upon surrender of this Warrant properly endorsed, subject to compliance with Section 6 and applicable federal and state securities laws.  The Company shall issue and deliver to the transferee a new Warrant representing the Warrant so transferred.  Upon any partial transfer, the Company will issue and deliver to Holder a new Warrant with respect to the Warrant not so transferred.  Holder shall not have any right to transfer any portion of this Warrant to any direct competitor of the Company.

 

10.                                  Registration Rights .  The Company grants registration rights to the Holder of this Warrant for any Common Stock of the Company obtained upon conversion of the Preferred Stock in parity to the registration rights granted to other holders of the Preferred Stock and agrees that the Holder of this Warrant shall be added as a party to that certain                                   dated as of                               of the Company (the “Registration Rights Agreement”), and that the Shares shall be made “Registrable Securities” under the Registration Rights Agreement.

 

11.                                  No Fractional Shares .  No fractional share of Preferred Stock will be issued in connection with any exercise hereunder, but in lieu of such fractional share the Company shall make a cash payment therefor upon the basis of the Warrant Price then in effect.

 

12.                                  Charges, Taxes and Expenses .  Issuance of certificates for shares of Preferred Stock upon the exercise of this Warrant shall be made without charge to the Holder for any United States or state of the United States documentary stamp tax or other incidental expense with respect to the issuance of such certificate, all of which taxes and expenses shall be paid by the Company, and such certificates shall be issued in the name of the Holder.

 

13.                                  No Shareholder Rights Until Exercise .  This Warrant does not entitle the Holder hereof to any voting rights or other rights as a shareholder of the Company prior to the exercise hereof.

 

14.                                  Registry of Warrant .  The Company shall maintain a registry showing the name and address of the registered Holder of this Warrant.  This Warrant may be surrendered for exchange or exercise, in accordance with its terms, at such office or agency of the Company, and the Company and Holder shall be entitled to rely in all respects, prior to written notice to the contrary, upon such registry.

 

15.                                  Loss, Theft, Destruction or Mutilation of Warrant .  Upon receipt by the Company of evidence reasonably satisfactory to it of the loss, theft, destruction or mutilation of this Warrant, and, in the case of loss, theft, or destruction, of indemnity reasonably satisfactory to it, and, if mutilated, upon surrender and cancellation of this Warrant, the Company will execute and deliver a new Warrant, having terms and conditions substantially identical to this Warrant, in lieu hereof.

 

16.                                  Miscellaneous .

 

(a)                                   Issue Date .  The provisions of this Warrant shall be construed and shall be given effect in all respect as if it had been issued and delivered by the Company on the date hereof.

 

8



 

(b)                                  Successors .  This Warrant shall be binding upon any successors or assigns of the Company.

 

(c)                                   Governing Law .  This Warrant shall be governed by and construed in accordance with the laws of the State of Connecticut.

 

(d)                                  Headings .  The headings used in this Warrant are used for convenience only and are not to be considered in construing or interpreting this Warrant.

 

(e)                                   Saturdays, Sundays, Holidays .  If the last of appointed day for the taking of any action or the expiration of any right required or granted herein shall be a Saturday or a Sunday or shall be a legal holiday in the State of Connecticut, then such action may be taken or such right may be exercised on the next succeeding day not a legal holiday.

 

(f)                                     Waiver of Jury Trial .  Each of the parties hereto hereby waives to the fullest extent permitted by applicable law, any right it may have to a trial by jury in respect of any litigation directly or indirectly arising out of, under or in connection with this Warrant or the Preferred Shares.

 

(g)                                  Attorney’s Fees .  In the event of any dispute between the parties concerning the terms and provisions of this Warrant, the party prevailing in such dispute shall be entitled to collect from the other party all costs incurred in such dispute, including reasonable attorney’s fees.

 

17.                                  No Impairment .  The Company will not, by amendment of its Certificate of Incorporation or any other voluntary action, avoid or seek to avoid the observance or performance of any of the terms of this Warrant, but will at all times in good faith assist in the carrying out of all such terms and in the taking of all such action as may be necessary or appropriate in order to protect the rights of the Holder hereof against impairment.

 

18.                                  Addresses .  Any notice required or permitted hereunder shall be in writing and shall be mailed by overnight courier, registered or certified mail, return receipt required, and postage prepaid, or otherwise delivered by hand or by messenger, addressed as set forth below, or at such other address as the Company or the Holder hereof shall have furnished to the other party.

 

If to the Company:

Sunesis Pharmaceuticals Incorporated

 

341 Oyster Point Blvd.

 

South San Francisco, CA 94080

 

Attn: Mr. Daniel N. Swisher, Jr.

 

 

If to the Holder:

General Electric Capital Corporation

 

83 Wooster Heights Road

 

Danbury, CT 06810

 

Attn:  Credit Manager-Life Science Finance

 

9



 

IN WITNESS WHEREOF, Sunesis Pharmaceuticals Incorporated has caused this Warrant to be executed by its officers thereunto duly authorized.

 

Dated as of June 27, 2004.

By:

/s/ Eric Bjerkholt

 

 

Name: Eric Bjerkholt

 

Title: SVP & CFO

 

10



 

NOTICE OF EXERCISE

 

TO:

 

1.                                        The undersigned Warrantholder (“Holder”) elects to acquire shares of the Series            Preferred Stock (the “Preferred Stock”) of                                (the “Company”), pursuant to the terms of the Stock Purchase Warrant dated                     , 200    (the “Warrant”).

 

2.                                        The Holder exercises its rights under the Warrant as set forth below:

 

o                                     The Holder elects to purchase                            shares of Preferred Stock as provided in Section 3(a) and tenders herewith a check in the amount of $                  as payment of the purchase price.

 

o                                     The Holder elects to convert the purchase rights into shares of Preferred Stock as provided in Section 3(b) of the Warrant

 

3.                                        The Holder surrenders the Warrant with this Notice of Exercise.

 

The Holder represents that it is acquiring the aforesaid shares of Preferred Stock for investment and not with a view to or for resale in connection with distribution and that the Holder has no present intention of distributing or reselling the shares.

 

Please issue a certificate representing the shares of the Preferred Stock in the name of the Holder or in such other name as is specified below:

 

Name:

 

Address:

 

Taxpayer I.D.:

 

 

 

 

 

(Holder)

 

 

 

By:

 

 

 

 

 

Title:

 

 

 

 

 

Date:

 

 

 



 

AMENDMENT NO. 1 TO STOCK PURCHASE WARRANT GRANTED TO

GENERAL ELECTRIC CAPITAL CORPORATION DATED JUNE 21, 2004

This amendment is to the STOCK PURCHASE WARRANT granted to General Electric Capital Corporation on June 21, 2004 to purchase from Sunesis Pharmaceuticals, Inc. 1,435 shares of Preferred Stock.

1.             The title is deleted in its entirety and replaced with the following:
WARRANT TO PURCHASE 1,435 SHARES OF SERIES C PREFERRED STOCK

2.             The first paragraph of the agreement is deleted in its entirety and is replaced with the following:

THIS CERTIFIES THAT, for value received, General Electric Capital Corporation (“Holder”) is entitled to subscribe for and purchase One Thousand Four Hundred Thirty Five (1,435) shares of the fully paid and nonassessable Series C Preferred Stock (the “Shares” or the “Preferred Stock”) of Sunesis Pharmaceuticals Incorporated, a Delaware corporation (the “Company”), at the Warrant Price (as hereinafter defined), subject to the provisions and upon the terms and conditions hereinafter set forth.  As used herein, the term Series C Preferred Stock and any stock into which such Series C Preferred Stock may hereafter be converted or exchanged.

Sunesis Pharmaceuticals, Inc.

By:

/s/ Daryl B. Winter

 

 

Daryl B. Winter

 

General Counsel

 

December 15, 2004

 

Amendment Acknowledged by General Electric Capital Corporation:

 

By:

/s/ Diane Earle

 

Name:   Diane Earle

Title:     Senior Vice President

Date:     December 16, 2004

 


 



Exhibit 10.25

 

MASTER SECURITY AGREEMENT

dated as of June 15, 2000 (“Agreement”)

 

THIS AGREEMENT is between General Electric Capital Corporation (together with its successors and assigns, if any, “Secured Party”), and Sunesis Pharmaceuticals Incorporated (“Debtor”). Secured Party has an office at 5150 EI Camino Real, Suite B-21, Los Altos, CA 94022. Debtor is a corporation organized and existing under the laws of the state of Delaware. Debtor’s mailing address and chief place of business is 3696 Haven Avenue, Suite C, Redwood City, CA 94063.

 

1.             CREATION OF SECURITY INTEREST.

 

Debtor grants to Secured Party, its successors and assigns, a security interest in and against all property listed on any collateral schedule now or in the future annexed to or made a part of this Agreement (“ Collateral Schedule ”), and in and against all additions, attachments, accessories and accessions to such property, all substitutions, replacements or exchanges therefor, and all insurance and/or other proceeds thereof (all such property is individually and collectively called the “ Collateral ”). This security interest is given to secure the payment and performance of all debts, obligations and liabilities of any kind whatsoever of Debtor to Secured Party, now existing or arising in the future, including but not limited to the payment and performance of certain Promissory Notes from time to time identified on any Collateral Schedule (collectively “ Notes ” and each a “ Note ”), and any renewals, extensions and modifications of such debts, obligations and liabilities (such Notes, debts, obligations and liabilities are called the “ Indebtedness ”). Notwithstanding anything to the contrary contained in this Agreement, to the extent that Secured Party asserts a purchase money security interest in any items of Collateral “ PMSI Collateral ”): (i) the PMSI Collateral shall secure only that portion of the Indebtedness which has been advanced by Secured Party to enable Debtor to purchase, or acquire rights in or the use of such PMSI Collateral (the “ PMSI Indebtedness ”), and (ii) no other Collateral shall secure the PMSI Indebtedness.

 

2.             REPRESENTATIONS, WARRANTIES AND COVENANTS OF DEBTOR.

 

Debtor represents, warrants and covenants as of the date of this Agreement and as of the date of each Collateral Schedule that:

 

(a) Debtor is, and will remain, duly organized, existing and in good standing under the laws of the State set forth in the preamble of this Agreement, has its chief executive offices at the location specified in the preamble, and is, and will remain, duly qualified and licensed in every jurisdiction wherever necessary to carry on its business and operations;

 

(b) Debtor has adequate power and capacity to enter into, and to perform its obligations under this Agreement, each Note and any other documents evidencing, or given in connection with, any of the Indebtedness (all of the foregoing are called the “ Debt Documents ”);

 

(c) This Agreement and the other Debt Documents have been duly authorized, executed and delivered by Debtor and constitute legal, valid and binding agreements enforceable in

 



 

accordance with their terms, except to the extent that the enforcement of remedies may be limited under applicable bankruptcy and insolvency laws;

 

(d) No approval, consent or withholding of objections is required from any governmental authority or instrumentality with respect to the entry into, or performance by Debtor of any of the Debt Documents, except any already obtained;

 

(e) The entry into, and performance by, Debtor of the Debt Documents will not (i) violate any of the organizational documents of Debtor or any judgment, order, law or regulation applicable to Debtor, or (ii) result in any breach of or constitute a default under any contract to which Debtor is a party, or result in the creation of any lien, claim or encumbrance on any of Debtor’s property (except for liens in favor of Secured Party) pursuant to any indenture, mortgage, deed of trust, bank loan, credit agreement, or other agreement or instrument to which Debtor is a party;

 

(f) There are no suits or proceedings pending in court or before any commission, board or other administrative agency against or affecting Debtor which could, in the aggregate, have a material adverse effect on Debtor, its business or operations, or its ability to perform its obligations under the Debt Documents, nor does Debtor have reason to believe that any such suits or proceedings are threatened;

 

(g) All financial statements delivered to Secured Party in connection with the Indebtedness have been prepared in accordance with generally accepted accounting principles, and since the date of the most recent financial statement, there has been no material adverse change in Debtors financial condition;

 

(h) The Collateral is not, and will not be, used by Debtor for personal, family or household purposes;

 

(i) The Collateral is, and will remain, in good condition and repair, and Debtor will not be negligent in its care and use;

 

(j) Debtor is, and will remain, the sole and lawful owner, and in possession of, the Collateral, and has the sole right and lawful authority to grant the security interest described in this Agreement; and

 

(k) The Collateral is, and will remain, free and clear of all liens, claims and encumbrances of any kind whatsoever, except for (i) liens in favor of Secured Party, (ii) liens for taxes not yet due or for taxes being contested in good faith and which do not involve, in the judgment of Secured Party, any risk of the sale, forfeiture or loss of any of the Collateral, and (iii) inchoate materialmen’s, mechanic’s, repairmen’s and similar liens arising by operation of law in the normal course of business for amounts which are not delinquent (all of such liens are called “ Permitted Liens ”).

 



 

3.             COLLATERAL.

 

(a) Until the declaration of any default, Debtor shall remain in possession of the Collateral; except that Secured Party shall have the right to possess (i) any chattel paper or instrument that constitutes a part of the Collateral, and (ii) any other Collateral in which Secured Party’s security interest may be perfected only by possession. Secured Party may inspect any of the Collateral during normal business hours after giving Debtor reasonable prior notice. If Secured Party asks, Debtor will promptly notify Secured Party in writing of the location of any Collateral.

 

(b) Debtor shall (i) use the Collateral only in its trade or business, (ii) maintain all of the Collateral in good operating order and repair, normal wear and tear excepted, (iii) use and maintain the Collateral only in compliance with manufacturers recommendations and all applicable laws, and (iv) keep all of the Collateral free and clear of all liens, claims and encumbrances (except for Permitted Liens).

 

(c) Debtor shall not, without the prior written consent of Secured Party, (i) part with possession of any of the Collateral (except to Secured Party or for maintenance and repair), (ii) remove any of the Collateral from the continental United States, or (iii) sell, rent, lease, mortgage, grant a security interest in or otherwise transfer or encumber (except for Permitted Liens) any of the Collateral.

 

(d) Debtor shall pay promptly when due all taxes, license fees, assessments and public and private charges levied or assessed on any of the Collateral, on its use, or on this Agreement or any of the other Debt Documents. At its option, Secured Party may discharge taxes, liens, security interests or other encumbrances at any time levied or placed on the Collateral and may pay for the maintenance, insurance and preservation of the Collateral and effect compliance with the terms of this Agreement or any of the other Debt Documents, Debtor agrees to reimburse Secured Party, on demand, all costs and expenses incurred by Secured Party in connection with such payment or performance and agrees that such reimbursement obligation shall constitute Indebtedness.

 

(e) Debtor shall, at all times, keep accurate and complete records of the Collateral, and Secured Party shall have the right to inspect and make copies of all of Debtor’s books and records relating to the Collateral during normal business hours, after giving Debtor reasonable prior notice.

 

(f) Debtor agrees and acknowledges that any third person who may at any time possess all or any portion of the Collateral shall be deemed to hold, and shall hold, the Collateral as the agent of, and as pledge holder for, Secured Party. Secured Party may at any time give notice to any third person described in the preceding sentence that such third person is holding the Collateral as the agent of, and as pledge holder for, the Secured Party.

 



 

4.             INSURANCE.

 

(a) Debtor shall at all times bear the entire risk of any loss, theft, damage to, or destruction of, any of the Collateral from any cause whatsoever.

 

(b) Debtor agrees to keep the Collateral insured against loss or damage by fire and extended coverage perils, theft, burglary, and for any or all Collateral which are vehicles, for risk of loss by collision, and if requested by Secured Party, against such other risks as Secured Party may reasonably require. The insurance coverage shall be in an amount no less than the full replacement value of the Collateral, and deductible amounts, insurers and policies shall be acceptable to Secured Party. Debtor shall deliver to Secured Party policies or certificates of insurance evidencing such coverage. Each policy shall name Secured Party as a loss payee, shall provide for coverage to Secured Party regardless of the breach by Debtor of any warranty or representation made therein, shall not be subject to co-insurance, and shall provide that coverage may not be canceled or altered by the insurer except upon thirty (30) days prior written notice to Secured Party. Debtor appoints Secured Party as its attorney-in-fact to make proof of loss, claim for insurance and adjustments with insurers, and to receive payment of and execute or endorse all documents, checks or drafts in connection with insurance payments. Secured Party shall not act as Debtors attorney-in-fact unless Debtor is in default. Proceeds of insurance shall be applied, at the option of Secured Party, to repair or replace the Collateral or to reduce any of the Indebtedness.

 

5.             REPORTS.

 

(a) Debtor shall promptly notify Secured Party of (i) any change in the name of Debtor, (ii) any relocation of its chief executive offices, (iii) any relocation of any of the Collateral, (iv) any of the Collateral being lost, stolen, missing, destroyed, materially damaged or worn out, or (v) any lien, claim or encumbrance other than Permitted Liens attaching to or being made against any of the Collateral.

 

(b) Debtor will deliver to Secured Party Debtors complete financial statements, certified by a recognized firm of certified public accountants, within ninety (90) days of the close of each fiscal year of Debtor. If Secured Party requests, Debtor will deliver to Secured Party copies of Debtors quarterly financial reports certified by Debtors chief financial officer, within ninety (90) days after the close of each of Debtors fiscal quarter. Debtor will deliver to Secured Party copies of all Forms 10-K and IO-Q, if any, within 30 days after the dates on which they are filed with the Securities and Exchange Commission.

 

6.             FURTHER ASSURANCES.

 

(a) Debtor shall, upon request of Secured Party, furnish to Secured Party such further information, execute and deliver to Secured Party such documents and instruments (including, without limitation, Uniform Commercial Code financing statements) and shall do such other acts and things as Secured Party may at any time reasonably request relating to the perfection or protection of the security interest created by this Agreement or for the purpose of carrying out

 



 

the intent of this Agreement. Without limiting the foregoing, Debtor shall cooperate and do all acts deemed necessary or advisable by Secured Party to continue in Secured Party a perfected first security interest in the Collateral, and shall obtain and furnish to Secured Party any subordinations, releases, landlord, lessor, or mortgagee waivers, and similar documents as may be from time to time requested by, and in form and substance satisfactory to, Secured Party.

 

(b) Debtor irrevocably grants to Secured Party the power to sign Debtor’s name and generally to act on behalf of Debtor to execute and file applications for title, transfers of title, financing statements, notices of lien and other documents pertaining to any or all of the Collateral; this power is coupled with Secured Party’s interest in the Collateral. Debtor shall, if any certificate of title be required or permitted by law for any of the Collateral, obtain and promptly deliver to Secured Party such certificate showing the lien of this Agreement with respect to the Collateral.

 

(c) Debtor shall indemnify and defend the Secured Party, its successors and assigns, and their respective directors, officers and employees, from and against all claims, actions and suits (including, without limitation, related attorneys’ fees) of any kind whatsoever arising. directly or indirectly, in connection with any of the Collateral.

 

7.             DEFAULT AND REMEDIES.

 

(a) Debtor shall be in default under this Agreement and each of the other Debt Documents if:

 

(i) Debtor breaches its obligation to pay when due any installment or other amount due or coming due under any of the Debt Documents;

 

(ii) Debtor, without the prior written consent of Secured Party, attempts to or does sell, rent lease, mortgage, grant a security interest in, or otherwise transfer or encumber (except for Permitted Liens) any of the Collateral;

 

(iii) Debtor breaches any of its insurance obligations under Section 4;

 

(iv) Debtor breaches any of its other obligations under any of the Debt Documents and fails to cure that breach within thirty (30) days after written notice from Secured Party;

 

(v) Any warranty, representation or statement made by Debtor in any of the Debt Documents or otherwise in connection with any of the Indebtedness shall be false or misleading in any material respect;

 

(vi) Any of the Collateral is subjected to attachment, execution, levy, seizure or confiscation in any legal proceeding or otherwise, or if any legal or administrative proceeding is commenced against Debtor or any of the Collateral, which in the good faith judgment of Secured Party subjects any of the Collateral to a material risk of attachment,

 



 

execution, levy, seizure or confiscation and no bond is posted or protective order obtained to negate such risk;

 

(vii) Debtor breaches or is in default under any other agreement between Debtor and Secured Party;

 

(viii) Debtor or any guarantor or other obligor for any of the Indebtedness (collectively “Guarantor”) dissolves, terminates its existence, becomes insolvent or ceases to do business as a going concern;

 

(ix) If Debtor or any Guarantor is a natural person, Debtor or any such Guarantor dies or becomes incompetent;

 

(x) A receiver is appointed for all or of any part of the property of Debtor or any Guarantor, or Debtor or any Guarantor makes any assignment for the benefit of creditors; or

 

(xi) Debtor or any Guarantor files a petition under any bankruptcy, insolvency or similar law, or any such petition is filed against Debtor or any Guarantor and is not dismissed within forty-five (45) days.

 

(b) If Debtor is in default, the Secured Party, at its option, may declare any or all of the Indebtedness to be immediately due and payable, without demand or notice to Debtor or any Guarantor. The accelerated obligations and liabilities shall bear interest (both before and after any judgment) until paid in full at the lower of eighteen percent (18%) per annum or the maximum rate not prohibited by applicable law.

 

(c) After default, Secured Party shall have all of the rights and remedies of a Secured Party under the Uniform Commercial Code, and under any other applicable law. Without limiting the foregoing, Secured Party shall have the right to (i) notify any account debtor of Debtor or any obligor on any instrument which constitutes part of the Collateral to make payment to the Secured Party, (ii) with or without legal process, enter any premises where the Collateral may be and take possession of and remove the Collateral from the premises or store it on the premises, (iii) sell the Collateral at public or private sale, in whole or in part, and have the right to bid and purchase at said sale, or (iv) lease or otherwise dispose of all or part of the Collateral, applying proceeds from such disposition to the obligations then in default. If requested by Secured Party, Debtor shall promptly assemble the Collateral and make it available to Secured Party at a place to be designated by Secured Party which is reasonably convenient to both parties. Secured Party may also render any or all of the Collateral unusable at the Debtor’s premises and may dispose of such Collateral on such premises without liability for rent or costs. Any notice that Secured Party is required to give to Debtor under the Uniform Commercial Code of the time and place of any public sale or the time after which any private sale or other intended disposition of the Collateral is to be made shall be deemed to constitute reasonable notice if such notice is given to the last known address of Debtor at least five (5) days prior to such action.

 



 

(d) Proceeds from any sale or lease or other disposition shall be applied: first, to all costs of repossession, storage, and disposition including without limitation attorneys’, appraisers’, and auctioneers’ fees; second, to discharge the obligations then in default; third, to discharge any other Indebtedness of Debtor to Secured Party, whether as obligor, endorser, guarantor, surety or indemnitor; fourth, to expenses incurred in paying or settling liens and claims against the Collateral; and lastly, to Debtor, if there exists any surplus. Debtor shall remain fully liable for any deficiency.

 

(e) Debtor agrees to pay all reasonable attorneys’ fees and other costs incurred by Secured Party in connection with the enforcement, assertion, defense or preservation of Secured Party’s rights and remedies under this Agreement, or if prohibited by law, such lesser sum as may be permitted. Debtor further agrees that such fees and costs shall constitute Indebtedness.

 

(f) Secured Party’s rights and remedies under this Agreement or otherwise arising are cumulative and may be exercised singularly or concurrently. Neither the failure nor any delay on the part of the Secured Party to exercise any right. power or privilege under this Agreement shall operate as a waiver, nor shall any single or partial exercise of any right, power or privilege preclude any other or further exercise of that or any other right, power or privilege. SECURED PARTY SHALL NOT BE DEEMED TO HAVE WAIVED ANY OF ITS RIGHTS UNDER THIS AGREEMENT OR UNDER ANY OTHER AGREEMENT, INSTRUMENT OR PAPER SIGNED BY DEBTOR UNLESS SUCH WAIVER IS EXPRESSED IN WRITING AND SIGNED BY SECURED PARTY. A waiver on anyone occasion shall not be construed as a bar to or waiver of any right or remedy on any future occasion.

 

(g) DEBTOR AND SECURED PARTY UNCONDITIONALLY WAIVE THEIR RIGHTS TO A JURY TRIAL OF ANY CLAIM OR CAUSE OF ACTION BASED UPON OR ARISING OUT OF THIS AGREEMENT, ANY OF THE OTHER DEBT DOCUMENTS, ANY OF THE INDEBTEDNESS SECURED HEREBY, ANY DEALINGS BETWEEN DEBTOR AND SECURED PARTY RELATING TO THE SUBJECT MATTER OF THIS TRANSACTION OR ANY RELATED TRANSACTIONS, AND/OR THE RELATIONSHIP THAT IS BEING ESTABLISHED BETWEEN DEBTOR AND SECURED PARTY. THE SCOPE OF THIS WAIVER IS INTENDED TO BE ALL ENCOMPASSING OF ANY AND ALL DISPUTES THAT MAY BE FILED IN ANY COURT. THIS WAIVER IS IRREVOCABLE. THIS WAIVER MAY NOT BE MODIFIED EITHER ORALLY OR IN WRITING. THE WAIVER ALSO SHALL APPLY TO ANY SUBSEQUENT AMENDMENTS, RENEWALS, SUPPLEMENTS OR MODIFICATIONS TO THIS AGREEMENT, ANY OTHER DEBT DOCUMENTS, OR TO ANY OTHER DOCUMENTS’ OR AGREEMENTS RELATING TO THIS TRANSACTION OR ANY RELATED TRANSACTION. THIS AGREEMENT MAY BE FILED AS A WRITTEN CONSENT TO A TRIAL BY THE COURT.

 

8.             MISCELLANEOUS.

 

(a) This Agreement, any Note and/or any of the other Debt Documents may be assigned, in whole or in part, by Secured Party without notice to Debtor, and Debtor agrees not to assert against any such assignee, or assignee’s assigns, any defense, set-off, recoupment claim or

 



 

counterclaim which Debtor has or may at any time have against Secured Party for any reason whatsoever. Debtor agrees that if Debtor receives written notice of an assignment from Secured Party, Debtor will pay all amounts payable under any assigned Debt Documents to such assignee or as instructed by Secured Party. Debtor also agrees to confirm in writing receipt of the notice of assignment as may be reasonably requested by assignee.

 

(b) All notices to be given in connection with this Agreement shall be in writing, shall be addressed to the parties at their respective addresses set forth in this Agreement (unless and until a different address may be specified in a written notice to the other party), and shall be deemed given (i) on the date of receipt if delivered in hand or by facsimile transmission, (ii) on the next business day after being sent by express mail, and (iii) on the fourth business day after being sent by regular, registered or certified mail. As used herein, the term “business day” shall mean and include any day other than Saturdays, Sundays, or other days on which commercial banks in New York, New York are required or authorized to be closed.

 

(c) Secured Party may correct patent errors and fill in all blanks in this Agreement or in any Collateral Schedule consistent with the agreement of the parties.

 

(d) Time is of the essence of this Agreement. This Agreement shall be binding, jointly and severally, upon all parties described as the “Debtor” and their respective heirs. executors, representatives, successors and assigns, and shall inure to the benefit of Secured Party, its successors and assigns.

 

(e) This Agreement and its Collateral Schedules constitute the entire agreement between the parties with respect to the subject matter of this Agreement and supersede all prior understandings (whether written, verbal or implied) with respect to such subject matter. THIS AGREEMENT AND ITS COLLATERAL SCHEDULES SHALL NOT BE CHANGED OR TERMINATED ORALLY OR BY COURSE OF CONDUCT, BUT ONLY BY A WRITING SIGNED BY BOTH PARTIES. Section headings contained in this Agreement have been included for convenience only, and shall not affect the construction or interpretation of this Agreement.

 

(f) This Agreement shall continue in full force and effect until all of the Indebtedness has been indefeasibly paid in full to Secured Party. The surrender, upon payment or otherwise, of any Note or any of the other documents evidencing any of the Indebtedness shall not affect the right of Secured Party to retain the Collateral for such other Indebtedness as may then exist or as it may be reasonably contemplated will exist in the future. This Agreement shall automatically be reinstated if Secured Party is ever required to return or restore the payment of all or any portion of the Indebtedness (all as though such payment had never been made).

 

(g) THIS AGREEMENT AND THE RIGHTS AND OBLIGATIONS OF THE PARTIES HEREUNDER SHALL IN ALL RESPECTS BE GOVERNED BY AND CONSTRUED IN ACCORDANCE WITH THE INTERNAL LAWS OF THE STATE OF CONNECTICUT (WITHOUT REGARD TO THE CONFLICT OF LAWS PRINCIPLES OF SUCH STATE), INCLUDING ALL MATTERS OF CONSTRUCTION, VALIDITY AND PERFORMANCE, REGARDLESS OF THE LOCATION OF THE EQUIPMENT.

 



 

IN WITNESS WHEREOF , Debtor and Secured Party, intending to be legally bound hereby, have duly executed this Agreement in one or more counterparts, each of which shall be deemed to be an original, as of the day and year first aforesaid.

 

 

SECURED PARTY:

DEBTOR:

 

 

General Electric Capital Corporation

Sunesis Pharmaceuticals Incorporated

 

 

By:

/s/ Barbara B. Kaiser

 

By:

/s/ Steven P. James

 

 

 

Name:

  Barbara B. Kaiser

 

Name:

  Steven P. James

 

 

 

 

 

Title:

EVP/General Manager

 

Title:

Senior V.P. Business Operations

 

 



 

AMENDMENT

 

THIS AMENDMENT is made as of the 15th day of June, 2000, between General Electric Capital Corporation (“Secured Party”) and Sunesis Pharmaceuticals, Inc. (“Debtor”) in connection with that certain Master Security Agreement dated or dated June 15, 2000 (“Agreement”). The terms of this Amendment are hereby incorporated into the Agreement as though fully set forth therein. Section references below refer to the section numbers of the Agreement. The Agreement is hereby amended as follows:

 

2.             REPRESENTATIONS, WARRANTIES AND COVENANTS OF DEBTOR

 

Subsection (a) is hereby amended and replaced with the following:

 

(a)                                Debtor is, and will remain, duly organized, existing and in good standing under the laws of the State set forth in the preamble of this Agreement, has-its chief executive offices at the location specified in the preamble, and is, and will remain, duly qualified and licensed in every jurisdiction in which the failure to be so qualified would have a material adverse effect on Debtor’s business and operations, the ownership of the Collateral, or its ability to perform its obligations under the Debt Documents;

 

In subsection (i) after the word “repair,” the words “subject to ordinary and reasonable wear and tear,” are hereby added.

 

3.             COLLATERAL.

 

In subsection (a) after the word “default,” the words “after the expiration of any applicable cure periods,” are hereby added.

 

Subsection (c) is hereby amended and replaced with the following:

 

(c)                                Debtor shall not, without the prior written consent of Secured Party, (i) part with possession of any of the Collateral (except to Secured Party or for maintenance and repair), (ii) remove any of the Collateral from the address specified in the Collateral Schedule, or (iii) sell, rent, lease, mortgage, grant a security interest in or otherwise transfer or encumber (except for Permitted Liens) any of the Collateral.

 

4.             INSURANCE.

 

In subsection (b) in the next to last sentence after the word “default,” the words “and all applicable cure periods have expired,” are hereby added.

 



 

5.             REPORTS.

 

Section 5 is hereby amended and replaced with the following:

 

5. REPORTS.

 

(a)           Debtor shall promptly notify Secured Party of (i) any change in the name of Debtor, (ii) any relocation of its chief executive offices, (iii) any relocation of any of the Collateral, which relocation may not be made unless Debtor has obtained the prior written consent of Secured Party, which consent shall not be unreasonably withheld (iv) any of the Collateral being lost, stolen, missing, destroyed, materially damaged or worn out, or (v) any lien, claim or encumbrance other than Permitted Liens attaching to or being made against any of the Collateral.

 

(b)           Debtor will deliver to Secured Party financial statements as follows. If Debtor is a privately held company, then Debtor agrees to provide (i) monthly financial statements, as provided to Debtor’s Board of Directors, within 30 days of each month end, or Debtor’s monthly closing unrestricted cash balance, certified by Debtor’s chief financial officer, within 20 days of each month end, (ii) unaudited quarterly financial statements (“Quarterly Financial Statements”), certified by Debtor’s chief financial officer including a balance sheet, statement of operations and cash flow statement within 30 days of each quarter end, and (iii) its complete audited annual financial statements (“Annual Financial Statements”), certified by a recognized firm of certified public accountants, within 120 days of fiscal year end or at such time as Debtor’s Board of Directors receives the audit. If Debtor is a publicly held company, then Debtor agrees to provide unaudited Quarterly Financial Statements, certified by Debtor’s chief financial officer and audited, Annual Financial Statements, certified by a recognized firm of certified public accountants, within 10 days after the statements are provided to the Securities and Exchange Commission (“SEC”). All such statements are to be prepared using generally accepted accounting principles and, if Debtor is a publicly held company, are to be in compliance with SEC requirements.”

 

6.             FURTHER ASSURANCES.

 

In subsection (c), the following words are hereby added to the end thereof: “but not for any claims caused by Secured Party’s gross negligence or willful misconduct.”

 

7.             DEFAULT AND REMEDIES.

 

In subsection (a)(x), the following words are hereby added to the end thereof: “which was not reversed or withdrawn within 45 days of such appointment.”

 



 

In the first sentence of subsection (b) after the word “default,” the words “and such default is not cured within the applicable cure period” are hereby added.

 

In the first sentence of subsection (c) after the word “default,” the words “and expiration of all applicable cure periods” are hereby added.

 

8.             MISCELLANEOUS.

 

In subsection (g), the word “Connecticut” shall be replaced with the word “New York.”

 

TERMS USED, BUT NOT OTHERWISE DEFINED HEREIN SHALL HAVE THE MEANINGS GIVEN TO THEM IN THE AGREEMENT. EXCEPT AS EXPRESSLY AMENDED HEREBY, THE AGREEMENT SHALL REMAIN IN FULL FORCE AND EFFECT. IF THERE IS ANY CONFLICT BETWEEN THE PROVISIONS OF THE AGREEMENT AND THIS AMENDMENT, THEN THIS AMENDMENT SHALL CONTROL.

 

IN WITNESS WHEREOF , the parties hereto have executed this Amendment simultaneously with Agreement by signature of their respective authorized representative set forth below.

 

General Electric Capital Corporation

Sunesis Pharmaceuticals, Inc.

 

 

By:

/s/ Barbara B. Kaiser

 

/s/ Steven P. James

 

 

 

 

Title:

EVP/General Manager

 

Title:

Senior V.P., Business Operations

 

 


 


 

AMENDMENT No. 2

THIS AMENDMENT No. 2 is made as of the 6th day of June, 2003, between General Electric Capital Corporation (“Secured Party”) and Sunesis Pharmaceuticals Incorporated (“Debtor”) in connection with that certain Master Security Agreement, dated as of June 15, 2000 as amended by Amendment dated June 15, 2000 (“Agreement”).  The terms of this Amendment No. 2 are hereby incorporated into the Agreement as though fully set forth therein.  Section references below refer to the section numbers of the Agreement.  The Agreement is hereby amended as follows:

 

7.             DEFAULT AND REMEDIES .

 

Subsection (a)(xiv) is hereby added to and made a part of the Agreement and reads as follows:

 

(xiv)        There is a material adverse change in the Debtor’s financial condition as determined solely by Secured Party.”

 

TERMS USED, BUT NOT OTHERWISE DEFINED HEREIN SHALL HAVE THE MEANINGS GIVEN TO THEM IN THE AGREEMENT.  EXCEPT AS EXPRESSLY AMENDED HEREBY, THE AGREEMENT SHALL REMAIN IN FULL FORCE AND EFFECT.  IF THERE IS ANY CONFLICT BETWEEN THE PROVISIONS OF THE AGREEMENT AND THIS AMENDMENT NO. 2, THEN THIS AMENDMENT NO. 2 SHALL CONTROL.

 

IN WITNESS WHEREOF, the parties hereto have executed this Amendment No. 2 simultaneously with the Agreement by signature of their respective authorized representative set forth below.

 

General Electric Capital Corporation

Sunesis Pharmaceuticals Incorporated

 

 

 

 

 

 

By:

/s/ Diane Earle

 

By:

/s/ Daryl B. Winter, Ph.D.

 

 

 

 

 

 

 

Name:

Diane Earle

 

Name:

Daryl B. Winter, Ph.D.

 

 

 

 

 

 

 

Title:

Senior Vice President

 

Title:

Senior Vice President & General Counsel

 

 

 

 



 

 

AMENDMENT No. 3

 

THIS AMENDMENT No. 3 is made as of the 18 th day of June, 2004, between General Electric Capital Corporation (“Secured Party”) and Sunesis Pharmaceuticals Incorporated (“Debtor”) in connection with that certain Master Security Agreement, dated as of June 15, 2000 as amended by Amendment dated June 15, 2000, and Amendment No. 2 dated as of June 6, 2003 (“Agreement”).  The terms of this Amendment No. 3 are hereby incorporated into the Agreement as though fully set forth therein.  Section references below refer to the section numbers of the Agreement.  The Agreement is hereby amended as follows:

 

7.             DEFAULT AND REMEDIES .

 

Subsection (a)(xv) is hereby added to and made a part of the Agreement and reads as follows:

 

(xv)         Debtor’s prepayment of the Biogen principal during the term of this Agreement without Secured Party’s prior written consent.”

 

TERMS USED, BUT NOT OTHERWISE DEFINED HEREIN SHALL HAVE THE MEANINGS GIVEN TO THEM IN THE AGREEMENT.  EXCEPT AS EXPRESSLY AMENDED HEREBY, THE AGREEMENT SHALL REMAIN IN FULL FORCE AND EFFECT.  IF THERE IS ANY CONFLICT BETWEEN THE PROVISIONS OF THE AGREEMENT AND THIS AMENDMENT NO. 3, THEN THIS AMENDMENT NO. 3 SHALL CONTROL.

 

IN WITNESS WHEREOF , the parties hereto have executed this Amendment No. 3 simultaneously with the Agreement by signature of their respective authorized representative set forth below.

 

General Electric Capital Corporation

Sunesis Pharmaceuticals Incorporated

 

 

By:

/s/ John Edel

 

By:

/s/ Eric Bjerkholt

 

 

 

Name:

 John Edel

 

Name: Eric Bjerkholt

 

 

Title:

Senior Vice President

 

Title: SVP & CFO

 

 

 



 

Equipment Concentration Rider

 

Sunesis Pharmaceuticals Incorporated (“Customer”), on or before May 31, 2005, shall cause the composition and mix of Equipment financed after June 8, 2004 under the Master Security Agreement dated as of June 15, 2000, as amended from time to time, between Customer and General Electric Capital Corporation to conform to and meet the following concentration requirements (hereinafter “Concentration Requirements”) for each class of Equipment (hereinafter “Equipment Class”) as identified and set forth below.  Customer herein represents and warrants that it shall maintain each such Equipment Class and its respective Concentration Requirement from and after such above referenced date and continuing thereafter to the end of the term:

 

Equipment Class

 

Concentration Requirement

 

 

 

 

 

Laboratory & scientific equipment:

 

Minimum of 43%

 

 

 

 

 

Lab and office furniture, office equipment, & similar:

 

Maximum of 3%

 

 

 

 

 

Computers & similar:

 

Maximum of 17%

 

 

 

 

 

Soft costs (leaseholds, software, tax & similar):

 

Maximum of 37%

 

 

Accepted and Agreed:

 

 

 

 

 

By: Eric Bjerkholt

 

 

 

Title: SVP & CFO

 

 

 

Date: 6-18-04

 

 

 


 

 


 

NEGATIVE COVENANT PLEDGE AGREEMENT

 

This Agreement is made and entered into as of this 17th day of May, 2002, by and between Sunesis Pharmaceuticals Incorporated , a Delaware corporation, with its principal place of business at 341 Oyster Point Blvd., South San Francisco CA 94080 (“Pledgor”) and General Electric Capital Corporation , or any subsequent holder hereof (each a “Pledgee”), at its office located at 401 Merritt 7, Suite 23, Norwalk, CT 06856.

 

In consideration of, and as an inducement for Pledgee to enter into Promissory Notes and Collateral Schedules after April 30, 2002, under that certain Master Security Agreement, dated as of June 15, 2000 (referred to hereinafter as the “Agreements”) with Pledgor, and to secure the payment and performance of all Pledgor’s obligations under the Agreements, Pledgor and Pledgee agree as follows:

 

1)                                       If at any point in time from the date of this Amendment, Pledgor’s Unrestricted Cash (as defined below) falls below the greater of $18,000,000 or 10 months’ cash needs (defined as the cash burn for the 3 months just completed, multiplied by a factor of 3.5), or Pledgor is in default of the Agreement, Pledgor agrees to provide to Pledgee within 10 days of such occurrence a cash security deposit in an amount equal to 50% of the original, aggregate Soft Costs financed on Promissory Notes and Collateral Schedules entered into after April 30, 2002 (the “Collateral Pledge”), but in no event to exceed the remaining amounts owed by Pledgor to Pledgee.

 

2)                                       The term “Unrestricted Cash” shall mean cash on hand, including investments in marketable securities with maturities of less than eighteen (18) months, less all long-term debt which is not subordinated to Pledgee.

 

3)                                       Pledgor hereby grants to Pledgee a security interest in the Collateral Pledge effective upon the payment and delivery of the Collateral Pledge to Pledgee.

 

4)                                       The failure to timely provide the Collateral Pledge to Pledgee shall constitute an event of default under the Agreements.

 

5)                                       To enhance Pledgor’s ability to make the Collateral Pledge as required in this Agreement, Pledgor hereby agrees that it will not agree to financial covenants with another lender or lessor that might trigger a security deposit or other payment to such other lender or lessor greater than $100,000 prior to Pledgor’s payment of the deposit to Pledgee.

 

6)                                       If Pledgor is a private company, then Pledgor agrees to provide monthly financial statements, including a balance sheet, statement of operations, and cash flow statement, to Pledgee within 30 days of each month end, and an audited annual statement to Pledgee within 120 days of fiscal year end or at such time as Pledgor’s Board of Directors receives the audit. If Pledgor is a public company, then Pledgor agrees to provide quarterly and annual audited financial statements to Pledgee within 10 days after the statements are provided to the Securities and Exchange Commission (“SEC”). All such statements are to be prepared using generally accepted accounting principles and are to be in compliance with applicable SEC requirements. Failure to provide these statements as specified herein will constitute an event of default under the Agreements.

 

 



 

7)                                       Additionally, at any time that Pledgor’s Unrestricted Cash would fall below the appropriate benchmark above if not augmented within 3 months, Pledgor’s Chief Financial Officer or other senior officer will, at Pledgee’s request, provide Pledgee with the monthly closing cash balance by not later than the 10th business day following each month-end.

 

8)                                       Pledgor agrees to keep all Unrestricted Cash within the following financial institutions

 

Financial Institution

 

Account Number

 

Officer Contact

 

Phone Number

 

 

 

Financial Institution

 

Account Number

 

Officer Contact

 

Phone Number

 

 

 

Financial Institution

 

Account Number

 

Officer Contact

 

Phone Number

 

 

 

Financial Institution

 

Account Number

 

Officer Contact

 

Phone Number

 

 

Any change in the above information shall be provided in writing by Pledgor to Pledgee within five (5) days of such change. Pledgor hereby authorizes these financial institutions to give specific account balance information to Pledgee and agrees to execute any other documents or take any other action required to provide verification of Unrestricted Cash balances.

 

9)                                       Pledgor agrees to recognize the Collateral Pledge as a contingent liability and to establish the appropriate reserves.

 

10)                                 Upon any default by Pledgor under the Agreements and while the same is continuing, Pledgee may, at its option, apply the Collateral Pledge to that date toward the satisfaction of Pledgor’s obligations under the Agreements and the payment of all reasonable costs and expenses incurred by Pledgee as a result of such default, including reasonable attorney’s fees. Pledgee is liable to Pledgor only for any surplus remaining from said Collateral Pledge after the full satisfaction of the foregoing obligations, costs and expenses.

 

11)                                 Pledgee shall have no duty to first commence an action against or seek recourse from Pledgor, if an event of default occurs and is continuing under the Agreements, before enforcing the provisions of, and proceeding under the provisions of, this Negative Covenant Pledge Agreement. The obligations of Pledgor under this Negative

 

2



 

Covenant Pledge Agreement shall be absolute and unconditional and shall remain in full force and effect without regard to, and shall not be released or discharged or in any way affected by:

 

a)                                       any amendment or modification of or supplement to the Agreements;

b)                                      any exercise or non-exercise of any right, remedy or privilege under or in respect to this Negative Covenant Pledge Agreement, the Agreements, or any other instrument provided for in the Agreement(s), or any waiver, consent, explanation, indulgency or actions or inaction with respect to any such instrument; or

c)                                       any bankruptcy, insolvency, reorganization, arrangement, readjustment, composition, liquidation or similar proceeding of Pledgor.

12)                                 The entire Collateral Pledge will be returned to Pledgor when Pledgor’s Unrestricted Cash exceeds the applicable benchmark above for a period of at least one fiscal quarter and continues to remain greater than the applicable benchmark and Pledgor is not in default under the Agreements or under any material financial obligation. (Alternatively, the entire Collateral Pledge will be returned immediately in the event Pledgor’s new equity or other non-refundable cash is great enough, in Pledgee’s reasonable judgment, to keep Pledgor’s Unrestricted Cash above the applicable benchmark for at least three fiscal quarters and Pledgor is not in default under the Agreements or under any material financial obligation).

 

13)                                 Alternatively, in the event of an acquisition, if a credit-worthy acquiror executes an assignment or guarantee acceptable to Pledgee, any Collateral Pledge held by Pledgee will be returned to Pledgor.

 

14)                                 Return of any required Collateral Pledge prior to the Termination of the Agreements (as defined below) is contingent upon the following additional conditions: (a) verification of all benchmarks is to be acceptable to Pledgee; (b) Pledgor is not in default under the Agreements; and c) Pledgor has not suffered any material adverse change within the past 12 months and is not aware of any prospective material adverse change.

 

15)                                 The “Termination of the Agreements” shall be defined as the satisfaction of all Pledgor’s obligations under the Agreements.

 

16)                                 If the Collateral Pledge is returned prior to the Termination of the Agreements, this Negative Covenant Pledge Agreement shall remain in full force and effect.

 

17)                                 If the Collateral Pledge has not been previously returned, upon Termination of the Agreements Pledgee shall deliver the Collateral Pledge (less any portion of same cashed, sold, assigned or delivered pursuant to, and under the circumstances specified in, Paragraph 10 hereof) promptly to Pledgor, and this Negative Covenant Pledge Agreement shall thereupon be without further effect.

 

3



 

                IN WITNESS WHEREOF, the parties hereto have caused this Negative Covenant Pledge to be executed as of the date first written above.

 

PLEDGOR:

PLEDGEE:

Sunesis Pharmaceuticals Incorporated

General Electric Capital Corporation

 

 

By:

 

 

By:

 

 

 

 

Title:

 

 

Title:

 

 

 

 

4


 


 

FORM OF PROMISSORY NOTE

 

____________________________

 (Date)

3696 Haven Avenue, Redwood City, CA 94063

(Address of Maker)

FOR VALUE RECEIVED, Sunesis Pharmaceuticals, Inc. (“ Maker ”) promises, jointly and severally if more than one, to pay to the order of General Electric Capital Corporation or any subsequent holder hereof (each, a “ Payee ”) at its office located at 5150 El Camino Real, Suite 8-21, Los Altos, CA 94022 or at such other place as Payee or the holder hereof may designate, the principal sum of                                         , with interest on the unpaid principal balance, from the date hereof through and including the dates of payment, at a fixed interest rate of        % per annum, to be paid in lawful money of the United States, in         (   ) consecutive monthly installments of principal and interest as follows:

 

Periodic
Installment

Amount

Monthly

$             

 

(each “Periodic Installment”), and a final installment which shall be in the amount of the total outstanding principal and interest.  The first Periodic Installment shall be due and payable on December 1, 2000 and the following Periodic Installments and the final installment shall be due and payable on the same day of each succeeding month (each, a “Payment Date”).  Such installments have been calculated on the basis of a 360 day year of twelve 30-day months.  Each payment may, at the option of the Payee, be calculated and applied on an assumption that such payment would be made on its due date.

 

The acceptance by Payee of any payment which is less than payment in full of all amounts due and owing at such time shall not constitute a waiver of Payee’s right to receive payment in full at such time or at any prior or subsequent time.

 

The Maker hereby expressly authorizes the Payee to insert the date value is actually given in the blank space on the face hereof and on all related documents pertaining hereto.

 

This Note is secured by the Master Security Agreement dated June 15, 2000 (“ Security Agreement ”).

 

Time is of the essence hereof.  If any installment or any other sum due under this Note or any Security Agreement is not received within ten (10) days after its due date, the Maker agrees to pay, in addition to the amount of each such installment or other sum, a late payment charge of five percent (5%) of the amount of said installment or other sum, but not exceeding any lawful maximum.  If (i) Maker fails to make payment of any amount due hereunder within ten (10) days after the same becomes due and payable; or (ii) Maker is in default under, or fails to perform under any term or condition contained in any Security Agreement, then the entire principal sum remaining unpaid, together with all accrued interest thereon and any other sum payable under this Note or any Security Agreement, at the election of Payee, shall immediately become due and payable, with interest thereon at the lesser of eighteen percent (18%) per annum or the highest rate not prohibited by applicable law from the date of such accelerated maturity until paid (both before and after any judgment).

 

Notwithstanding anything to the contrary contained herein or in the Security Agreement, Maker may not prepay in full or in part any indebtedness hereunder without the express written consent of Payee in its sole discretion.

 

It is the intention of the parties hereto to comply with the applicable usury laws; accordingly, it is agreed that, notwithstanding any provision to the contrary in this Note or any Security Agreement, in no event shall this Note or any Security Agreement require the payment or permit the collection of interest in excess of the maximum amount permitted by applicable law.  If any such excess interest is contracted for, charged or received under this Note or any Security Agreement, or if all of the principal balance shall be prepaid, so that under any of such circumstances the amount of interest contracted for, charged or received under this Note or any Security Agreement on the principal balance shall exceed the maximum amount of interest permitted by applicable law, then in such event (a) the provisions of this paragraph shall govern and control, (b) neither Maker nor any other person or entity now or hereafter liable for the payment hereof shall be obligated to pay the amount of such interest to the extent that it is in excess of the maximum amount of interest permitted by applicable law, (c) any such excess which may have been collected shall be either applied as a credit against the then unpaid principal balance or refunded to Maker, at the option of the Payee, and (d) the effective rate of interest shall be automatically reduced to the maximum lawful contract rate allowed under applicable law as now or hereafter construed by the courts having jurisdiction thereof.  It is further agreed that without limitation of the foregoing, all calculations of the rate of interest contracted for, charged or received under this Note or any Security Agreement which are made for the purpose of determining whether such rate exceeds the maximum lawful contract rate, shall be made, to the extent permitted by applicable law, by amortizing, prorating, allocating and spreading in equal parts during the period of the full stated term of the indebtedness evidenced hereby, all interest at any time contracted for, charged or received from Maker or otherwise by Payee in connection with such indebtedness; provided, however, that if any applicable state law is amended or the law of the United States of America preempts any applicable state law, so that it becomes lawful for the Payee to receive a greater interest per annum rate than is presently allowed, the Maker agrees that, on the effective date of such amendment or preemption, as the case may be, the lawful maximum hereunder shall be increased to the maximum interest per annum rate allowed by the amended state law or the law of the United States of America.

 

 



 

The Maker and all sureties, endorsers, guarantors or any others (each such person, other than the Maker, an “ Obligor ”) who may at any time become liable for the payment hereof jointly and severally consent hereby to any and all extensions of time, renewals, waivers or modifications of, and all substitutions or releases of, security or of any party primarily or secondarily liable on this Note or any Security Agreement or any term and provision of either, which may be made, granted or consented to by Payee, and agree that suit may be brought and maintained against any one or more of them, at the election of Payee without joinder of any other as a party thereto, and that Payee shall not be required first to foreclose, proceed against, or exhaust any security hereof in order to enforce payment of this Note.  The Maker and each Obligor hereby waives presentment, demand for payment, notice of nonpayment, protest, notice of protest, notice of dishonor, and all other notices in connection herewith, as well as filing of suit (if permitted by law) and diligence in collecting this Note or enforcing any of the security hereof, and agrees to pay (if permitted by law) all expenses incurred in collection, including Payee’s actual attorneys’ fees.  Maker and each Obligor agrees that fees not in excess of twenty percent (20%) of the amount then due shall be deemed reasonable.

 

THE MAKER HEREBY UNCONDITIONALLY WAIVES ITS RIGHTS TO A JURY TRIAL OF ANY CLAIM OR CAUSE OF ACTION BASED UPON OR ARISING OUT OF, DIRECTLY OR INDIRECTLY, THIS NOTE, ANY OF THE RELATED DOCUMENTS, ANY DEALINGS BETWEEN MAKER AND PAYEE RELATING TO THE SUBJECT MATTER OF THIS TRANSACTION OR ANY RELATED TRANSACTIONS, AND/OR THE RELATIONSHIP THAT IS BEING ESTABLISHED BETWEEN MAKER AND PAYEE.  THE SCOPE OF THIS WAIVER IS INTENDED TO BE ALL ENCOMPASSING OF ANY AND ALL DISPUTES THAT MAY BE FILED IN ANY COURT (INCLUDING, WITHOUT LIMITATION, CONTRACT CLAIMS, TORT CLAIMS, BREACH OF DUTY CLAIMS, AND ALL OTHER COMMON LAW AND STATUTORY CLAIMS.) THIS WAIVER IS IRREVOCABLE MEANING THAT IT MAY NOT BE MODIFIED EITHER ORALLY OR IN WRITING, AND THE WAIVER SHALL APPLY TO ANY SUBSEQUENT AMENDMENTS, RENEWALS, SUPPLEMENTS OR MODIFICATIONS TO THIS NOTE, ANY RELATED DOCUMENTS, OR TO ANY OTHER DOCUMENTS OR AGREEMENTS RELATING TO THIS TRANSACTION OR ANY RELATED TRANSACTION.  IN THE EVENT OF LITIGATION, THIS NOTE MAY BE FILED AS A WRITTEN CONSENT TO A TRIAL BY THE COURT.

 

This Note and any Security Agreement constitute the entire agreement of the Maker and Payee with respect to the subject matter hereof and supersedes all prior understandings, agreements and representations, express or implied.

 

No variation or modification of this Note, or any waiver of any of its provisions or conditions, shall be valid unless in writing and signed by an authorized representative of Maker and Payee.  Any such waiver, consent, modification or change shall be effective only in the specific instance and for the specific purpose given.

 

Any provision in this Note or any Security Agreement which is in conflict with any statute, law or applicable rule shall be deemed omitted, modified or altered to conform thereto.

 

 

 

 

Sunesis Pharmaceuticals, Inc.

 

 

 

By:

(L.S.)

(Witness)

 

(Signature)

 

 

 

 

 

 

 

 

 

(Print name)

 

Print name (and title, if applicable)

 

 

 

 

 

 

 

 

 

 

 

94-3295878

 

(Address)

 

(Federal tax identification number)

 

 

 

2


 



EXHIBIT 10.29

 

Execution Copy

 

COLLABORATION AGREEMENT

 

This COLLABORATION AGREEMENT (the “Agreement”), effective as of August 25, 2004 (the “Effective Date”), is made by and between Sunesis Pharmaceuticals, Inc., a Delaware corporation, having a principal place of business at 341 Oyster Point Boulevard, South San Francisco, CA 94080 (“Sunesis”), and Biogen Idec MA Inc., a Massachusetts corporation, having a principal place of business at 14 Cambridge Center, Cambridge, MA (“Biogen Idec”).  Sunesis and Biogen Idec are sometimes referred to herein individually as a “Party” and collectively as the “Parties”.

 

BACKGROUND

 

A.                                    Sunesis has developed proprietary technology and know-how for the discovery and optimization of small molecules that bind to enzyme targets and protein-protein interfaces, with special expertise towards kinases;

 

B.                                      Biogen Idec engages in the research, development and commercialization of pharmaceutical compounds;

 

C.                                      Sunesis and Biogen Idec wish to collaborate to discover and develop small molecules that modulate certain Targets, especially Kinase Targets, with the goal of delivering compounds with desired activity and selectivity; and

 

D.                                     Biogen Idec wishes to acquire exclusive licenses under the Collaboration Technology to develop and commercialize Target Selective Compounds in the Field resulting from the collaboration, as well as certain other rights to the results of the collaboration, and Sunesis wishes to grant to Biogen Idec such license, all on the terms and conditions herein.

 

NOW, THEREFORE, for and in consideration of the covenants, conditions and undertakings hereinafter set forth, it is agreed by and between the Parties as follows:

 

ARTICLE 1
DEFINITIONS

 

As used herein, the following terms will have the meanings set forth below:

 

1.1                                  Affiliate ” of a Party shall mean any corporation or other business entity which during the Term of this Agreement Controls, is Controlled by or is under common Control with such Party but only for so long as such entity Controls, is Controlled by, or is under common control with such Party.  With respect to a particular entity, “Control” shall mean the ownership directly or indirectly of fifty percent (50%) or more of the stock entitled to vote for the election of directors, and for nonstock organizations, of the equity interests entitled to control the management of such entity.

 

 


Confidential treatment has been requested for portions of this exhibit.  The copy filed herewith omits the information subject to the confidentiality request.  Omissions are designated as [*].  A complete version of this exhibit has been filed separately with the Securities and Exchange Commission.

 



 

1.2                                  Co-Funding Option ” shall mean the option of Sunesis to fund a portion of the post Phase I Development Costs of a Product in the Co-Funded Territory as provided in Section 3.2.  The “Co-Funded Territory” shall have the meaning set forth in Section 3.2.1.

 

1.3                                  Collaboration Compound ,” “ Active Compound ,” “ Excluded Compound ,” “ Licensed Pre-Existing Compound, ” “ Other Compound ,” “ Synthesized Compound ” and “ Target Selective Compound ” shall have the meanings set forth below:

 

1.3.1                         Active Compound ” shall mean a soluble chemical compound that can bind non-covalently to a Collaboration Target or a Target for which such compound is counterscreened, in each case where such compound modulates the enzymatic activity of such Target at a concentration of [*] or lower.

 

1.3.2                         Collaboration Compound ” shall mean each compound that is: (i) a Synthesized Compound, (ii) a Collaboration Derivative Synthesized by or under authority of either Party or any of its Controlled Affiliates, after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term, (iii) a Licensed Pre-Existing Compound, (iv) Covered by a Valid Claim of a Joint Collaboration Patent or a Sunesis Collaboration Patent, or (v) Covered by a Valid Claim of a patent within the Sunesis Core Technology as applied (A) to a Collaboration Target by or under authority of either Party or any of its Controlled Affiliates, or (B) to a Target other than a Collaboration Target by or under authority of Biogen Idec or any of its Controlled Affiliates.

 

1.3.3                         Excluded Compounds ” shall mean any compound, to the extent the same is: (i) disclosed in either Party’s patents or patent applications as of the Effective Date; (ii) in the possession of either Party as of the Effective Date; (iii) acquired by a Party from a Third Party after the Effective Date by way of a merger with, or acquisition of, such Third Party; or (iv) independently developed by a Party outside of the Research Program without use of or access to any Collaboration Technology, or any Confidential Information of the other Party; in each of (i) through (iv) above, as evidenced by such Party’s contemporaneous written records.  Notwithstanding the foregoing, Excluded Compounds shall not include Licensed Pre-Existing Compounds.  Further, both Parties agree that there are no Sunesis Excluded Compounds that are Target Selective against the Raf/[*] Target as of the Effective Date.

 

1.3.4                         Licensed Pre-Existing Compounds ” shall mean any compound that is (i) Target Selective against the Raf/[*] Target or any Target in the Target Selection Pool, and (ii) in the possession of Sunesis or disclosed in a patent or patent application owned or controlled by Sunesis, in each case at any time after the Effective Date but prior to three (3) months after the Effective Date, provided that as of the date that four (4) Targets have been designated by Biogen Idec as Collaboration Targets pursuant to Section 2.5.2, (A) any such compound shall cease to be a Licensed Pre-Existing Compound in the event that such compound is not Target Selective against any Target that is then a Collaboration Target, and (B) any such compound that is Target Selective against a Target that is then a Collaboration Target shall remain a Licensed Pre-Existing Compound.  For clarity, a compound described in (B) above shall remain a Licensed

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

2



 

Pre-Existing Compound irrespective of whether such compound has been measured to be Target Selective against such Collaboration Target.   Notwithstanding anything else in this Section 1.3.4, License Pre-Existing Compounds shall exclude in all cases any compound that is Target Selective against the [*] Target.

 

1.3.5                         Other Compound ” shall mean a Collaboration Compound that is not Target Selective against any Target that is a then a Collaboration Target.

 

1.3.6                         Synthesized Compound ” shall mean any Active Compound that is actually Synthesized by either Party alone or by both Parties jointly during the Research Term in the course of activities directed to a Target that is then a Collaboration Target in the performance of the Research Program in accordance with the then-current Research Plan.  For avoidance of doubt, “Synthesized Compounds” shall not include Excluded Compounds.  A compound, even if it is prepared or identified during the Research Term, cannot be considered a Synthesized Compound unless there has been the application of (i) a patent within the Sunesis Core Technology to a Target that is then a Collaboration Target, (ii) Joint Collaboration Technology, or (iii) Sunesis Collaboration Technology actually disclosed to Biogen Idec during the Research Term, in each case during its discovery, preparation, or identification.

 

1.3.7                         Target Selective Compound ” shall mean any Collaboration Compound that is Target Selective against a Target that is then a Collaboration Target.

 

1.4                                  Collaboration Technology ” shall mean all Collaboration Patents and Collaboration Know-How.

 

1.4.1                         Collaboration Patents ” shall mean all Biogen Idec Collaboration Patents, Sunesis Collaboration Patents and Joint Collaboration Patents.

 

1.4.2                         Collaboration Know-How ” shall mean all Biogen Idec Collaboration Know-How, Sunesis Collaboration Know-How and Joint Collaboration Know-How.

 

1.5                                  Biogen Idec Collaboration Technology ” shall mean all Biogen Idec Collaboration Patents and Biogen Idec Collaboration Know-How.

 

1.5.1                         Biogen Idec Collaboration Patents ” shall mean all patents, patent applications and invention disclosures the subject of which is an invention that is: (i) conceived in the course of performing the Research Program during the Research Term and reduced to practice prior to the third (3 rd ) anniversary of the end of the Research Term solely by or under authority of personnel of Biogen Idec or any of its Controlled Affiliates; or (ii) conceived and reduced to practice solely by or under authority of personnel of Biogen Idec or any of its Controlled Affiliates after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term in the course of activities directed to the discovery, research, or development of Collaboration Compounds.  It is to be understood that Biogen Idec Collaboration Patents shall include any divisions, continuations, continuations-in-part, reissues, reexaminations, extensions or other governmental actions which extend any of the patent applications or patents in (i) or (ii) above, and any substitutions, confirmations, registrations, revalidations or foreign counterparts of any of the foregoing.  Notwithstanding the foregoing, Biogen Idec Collaboration Patents shall in all cases exclude Sunesis Core Technology and Joint Collaboration Patents.

 

3



 

1.5.2                         Biogen Idec Collaboration Know-How ” shall mean any Know-How: (i) made or developed solely by or under authority of personnel of Biogen Idec or any of its Controlled Affiliates in the course of performing the Research Program during the Research Term; or (ii) made or developed solely by or under authority of personnel of Biogen Idec or any of its Controlled Affiliates after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term in the course of activities specifically related to the discovery, research, or development of Collaboration Derivatives.  Notwithstanding the foregoing, Biogen Idec Collaboration Know-How shall in all cases exclude Sunesis Core Technology, Joint Collaboration Know-How and Excluded Compounds.

 

1.6                                  Sunesis Collaboration Technology ” shall mean all Sunesis Collaboration Patents and Sunesis Collaboration Know-How.

 

1.6.1                         Sunesis Collaboration Patents ” shall mean all patents, patent applications and invention disclosures the subject of which is an invention that is: (i) conceived in the course of performing the Research Program during the Research Term and reduced to practice prior to the third (3 rd ) anniversary of the end of the Research Term solely by or under authority of personnel of Sunesis or any of its Controlled Affiliates; or (ii) conceived and reduced to practice solely by or under authority of personnel of Sunesis or any of its Controlled Affiliates after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term in the course of activities directed to the discovery, research, or development of Collaboration Derivatives.  It is to be understood that Sunesis Collaboration Patents shall include any divisions, continuations, continuations-in-part, reissues, reexaminations, extensions or other governmental actions which extend any of the patent applications or patents in (i) or (ii) above, and any substitutions, confirmations, registrations, revalidations or foreign counterparts of any of the foregoing.  Notwithstanding the foregoing, Sunesis Collaboration Patents shall in all cases exclude Sunesis Core Technology and Joint Collaboration Patents.

 

1.6.2                         Sunesis Collaboration Know-How ” shall mean any Know-How: (i) made or developed solely by or under authority of personnel of Sunesis or any of its Controlled Affiliates in the course of performing the Research Program during the Research Term; or (ii) made or developed solely by or under authority of personnel of Sunesis or any of its Controlled Affiliates after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term in the course of activities specifically related to the discovery, research, or development of Collaboration Derivatives.  Notwithstanding the foregoing, Sunesis Collaboration Know-How shall in all cases exclude Sunesis Core Technology, Joint Collaboration Know-How and Excluded Compounds.

 

1.7                                  Joint Collaboration Technology ” shall mean all Joint Collaboration Patents and Joint Collaboration Know-How.

 

1.7.1                         Joint Collaboration Patents ” shall mean all patents, patent applications and invention disclosures the subject of which is an invention that is: (i) conceived in the course of performing the Research Program during the Research Term and reduced to practice prior to the third (3 rd ) anniversary of the end of the Research Term jointly by, or under authority of, both Parties; (ii) conceived and reduced to practice jointly by, or under authority of, both Parties after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term in the

 

4



 

course of activities directed to the discovery, research, or development of Collaboration Derivatives; (iii) conceived in the course of performing the Research Program during the Research Term and reduced to practice prior to the third (3 rd ) anniversary of the end of the Research Term using Joint Collaboration Know-How, Sunesis Collaboration Know-How or Sunesis Core Technology by or under authority of personnel of Biogen Idec or any of its Controlled Affiliates; or (iv) conceived and reduced to practice using Joint Collaboration Know-How, Sunesis Collaboration Know-How or Sunesis Core Technology by or under authority of personnel of Biogen Idec or any of its Controlled Affiliates after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term in the course of activities directed to the discovery, research, or development of Collaboration Derivatives.  It is to be understood that Joint Collaboration Patents shall include any divisions, continuations, continuations-in-part, reissues, reexaminations, extensions or other governmental actions which extend any of the patent applications or patents in (i), (ii), (iii) or (iv) above, and any substitutions, confirmations, registrations, revalidations or foreign counterparts of any of the foregoing.  For clarity, the inventions described in subsections (iii) and (iv) above are limited to those inventions directed at or comprising compositions of matter that modulate Targets and/or methods of use thereof in modulating Targets.  Notwithstanding the foregoing, Joint Collaboration Patents shall in all cases exclude Sunesis Core Technology.

 

1.7.2                         Joint Collaboration Know-How ” shall mean any Know-How: (i) made or developed jointly by, or under authority of, both Parties in the course of performing the Research Program during the Research Term; (ii) made or developed jointly by, or under authority of, both Parties after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term in the course of activities specifically related to the discovery, research, or development of Collaboration Derivatives; (iii) that is a Synthesized Compound; or (iv) a Collaboration Derivative Synthesized by or under authority of either Party or any of its Controlled Affiliates, after the Effective Date but prior to the third (3 rd ) anniversary of the end of the Research Term.  Notwithstanding the foregoing, Joint Collaboration Know-How shall in all cases exclude Sunesis Core Technology, Excluded Compounds and Biogen Idec Derivatives.

 

For the avoidance of doubt, in the event a compound is Synthesized, an invention is made or Know-How is generated in the course of research activities directed to a Target that is not at the time a Collaboration Target, such compound, invention or Know-How made in the course of such research activities shall not be deemed to have been made in the course of performing the Research Program or for use in the Field, regardless of whether such Target subsequently becomes a Collaboration Target.

 

In addition, notwithstanding anything in subsections (i) through (iv) of this Section 1.7.2, Joint Collaboration Know-How shall not include any Know-How that was not made or developed during the Research Term in the course of activities directed to a Target that is then a Collaboration Target in the performance of the Research Program in accordance with the then-current Research Plan.

 

1.8                                  Collaboration Derivative ” shall mean a chemical compound Synthesized in the course of activities directed to a Target using as a starting point one or more: (i) Synthesized Compound(s); (ii) Licensed Pre-Existing Compound(s); (iii) compound(s) that are Covered by a Valid Claim of a Joint Collaboration Patent or Sunesis Collaboration Patent; (iv) compound(s)

 

5



 

that are Covered by a Valid Claim of a patent within the Sunesis Core Technology as applied (A) to a Collaboration Target by or under authority of either Party or any of its Controlled Affiliates, or (B) to a Target other than a Collaboration Target by or under authority of Biogen Idec or any of its Controlled Affiliates; or (v) Kinase-Active Fragment(s).

 

1.8.1                         Biogen Idec Derivative ” shall mean a chemical compound that is Synthesized solely by personnel of Biogen Idec or any of its Controlled Affiliates in the course of activities directed to a Target that is not then a Collaboration Target, where such chemical compound is not a Collaboration Derivative.

 

1.9                                  Combination Product ” shall mean any of (i) a Product that incorporates two or more active drug substances including a Target Selective Compound, (ii) a Sunesis Product that incorporates two or more active drug substances including an Other Compound, or (iii) an Other Biogen Idec Product that incorporates two or more active drug substances including an Other Compound; in each case where at least one of the active drug substances is neither a Target Selective Compound, nor an Other Compound (respectively).

 

1.10                            Commercially Reasonable and Diligent Efforts ” shall mean the level of effort and resources normally used by a Party for a product or compound owned or controlled by it, which is of similar market potential and at a similar stage in its development or product life, taking into account, without limitation, with respect to a product issues of safety and efficacy, product profile, the proprietary position of the product, the then current competitive environment for the product and the likely timing of the product’s entry into the market, the regulatory environment of the product, and other relevant scientific, technical and commercial factors.  Notwithstanding the foregoing, to the extent that the performance of a Party’s responsibilities hereunder is adversely affected by the other Party’s failure to perform its responsibilities hereunder, such Party shall not be deemed to have failed to use its Commercially Reasonable and Diligent Efforts in performing such responsibilities.  Notwithstanding, but not in limitation of the foregoing, Biogen Idec shall be deemed to be using Commercially Reasonable and Diligent Efforts for a Co-Funded Product specifically directed at a particular Collaboration Target if it is using Commercially Reasonable and Diligent Efforts with respect to a Collaboration Compound specifically directed at such Collaboration Target. In addition, Biogen Idec shall be deemed to be using Commercially Reasonable and Diligent Efforts with respect to a Collaboration Target if it is using Commercially Reasonable and Diligent Efforts to research, develop and commercialize a Collaboration Compound specifically directed at such Collaboration Target.  In the event that there is a good faith dispute as to whether the activities described in a Diligence Summary constitute Commercially Reasonable and Diligent Efforts to research, develop and commercialize Collaboration Compounds specifically directed at a particular Target, then such Party may refer the dispute for a prompt determination by the JSC.  In the event that the JSC is unable to reach consensus on such determination, then the matter shall be referred to the Parties’ respective Chief Scientific Officers.  Upon such request, the Chief Scientific Officers shall make themselves reasonably available to meet, and shall meet either by telephone or if, specifically requested, in person, to attempt to resolve such matter, and shall thereafter continue to use good faith efforts to attempt to resolve such matter unless it becomes clear that the matter cannot be resolved by mutual agreement.  Thereafter either Party may pursue such legal process as is otherwise available under applicable law.

 

6



 

1.11                            Confidential Information ” shall mean, with respect to a Party, all information (and all tangible and intangible embodiments thereof), which is owned or controlled by such Party, and is disclosed by such Party to the other Party pursuant to this Agreement.  Notwithstanding the foregoing, Confidential Information of a Party shall not include information which, and only to the extent, the receiving Party can establish by written documentation (a) has been generally known prior to disclosure of such information by the disclosing Party to the receiving Party; (b) has become generally known, without the fault of the receiving Party, subsequent to disclosure of such information by the disclosing Party to the receiving Party; (c) has been received by the receiving Party at any time from a source, other than the disclosing Party, rightfully having possession of and the right to disclose such information free of confidentiality obligations; (d) has been otherwise known by the receiving Party free of confidentiality obligations prior to disclosure of such information by the disclosing Party to the receiving Party; or (e) is independently developed without reference to or use of the Confidential Information of the disclosing Party.  For clarity, except as otherwise expressly provided in this Agreement, Sunesis Collaboration Technology, Joint Collaboration Technology and the Licensed Pre-Existing Technology shall be deemed Confidential Information of both Biogen Idec and Sunesis.  For clarity, Biogen Idec Collaboration Technology shall be deemed Confidential Information solely of Biogen Idec.

 

1.12                            Covered ” shall mean, with respect to a compound and a Valid Claim, that the manufacture, use, sale, offer for sale or importation of such compound, but for the licenses or ownership rights granted herein, would infringe such Valid Claim.

 

1.13                            Criteria ” shall mean the “ Hit Compound Criteria ”, and “ Lead Compound Criteria ”.

 

1.13.1                   Hit Compound Criteria ” shall mean (i) those criteria set forth in Exhibit 1.13.1 hereto, and (ii) such other criteria that are approved by the JRC in accordance with Section 2.5.9(a) and agreed in writing by the Parties in order for such compound to be deemed a Hit Compound. “ Hit Compound ” shall mean any Collaboration Compound that meets the Hit Compound Criteria with respect to a Collaboration Target.

 

1.13.2                   Lead Compound Criteria ” shall mean (i) those criteria set forth in Exhibit 1.13.2 hereto, and (ii) such other criteria that are approved by the JRC in accordance with Section 2.5.9(a) and agreed in writing by the Parties in order for such compound to be deemed a Lead Compound for purposes of Section 1.41.  “ Lead Compound ” shall mean any Collaboration Compound that becomes a Lead Compound in accordance with Section 2.6.

 

1.14                            Development ” shall mean all research and pre-approval development and regulatory activities regarding the Product.  “Development” shall include, without limitation, all pre-approval activities related to research, optimization and design of the appropriate molecule and identification of back-ups, preclinical testing, test method development and stability testing, toxicology, formulation, process development, manufacturing scale-up, qualification and validation, quality assurance/quality control, clinical studies, manufacturing clinical supplies, regulatory affairs, statistical analysis and report writing, technology transfer, market research and development, and all other pre-approval activities.  When used as a verb, “Develop” shall mean to engage in Development.

 

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1.15                            Development Candidate ” shall mean a Collaboration Compound designated by Biogen Idec as a Development Candidate in accordance with Section 2.6.

 

1.16                            Development Costs ” shall mean the costs and expenses associated with Development activities actually incurred by the Parties or their Affiliates for a particular Product during the measurement period and in the territories described in Section 3.2.4(d).  The costs and expenses associated with Development activities shall include, but are not limited to, costs of studies on the toxicological, pharmacological, metabolical or clinical aspects of a Product, including clinical trials, conducted internally or by individual investigators or consultants and necessary for the purpose of obtaining, maintaining and/or expanding marketing approval of a Product, process development, process improvement and scale-up and recovery costs (including plant costs), validation costs, including qualification lots, the manufacture of clinical supplies of Product, including failed batches, costs for preparing, submitting, reviewing or developing data or information for the purpose of submission to a governmental authority to obtain, maintain and/or expand manufacturing and/or marketing approval of a Product and costs of marketing studies related to a Product.  “Development Costs” shall also include expenses for data management, statistical designs and studies, document preparation, and other administration expenses associated with the clinical testing program.  In determining “Development Costs” chargeable under this Agreement, each Party will use its respective project accounting systems, and will review and approve its project accounting systems and methodologies with the other Party.  The Parties hereby agree that efforts of the employees of a Party or its Affiliates in performing its activities hereunder shall be charged as Development Costs at the FTE Rate.  Notwithstanding anything in this Section 1.16 to the contrary, only those Development Costs that are contemplated by the Co-Development Plan and Budget or were otherwise approved by the JSC shall be chargeable by a Party as Development Costs.  It is further understood that the activities of the following groups or functions shall not be chargeable as Development Costs: Corporate Administration, Human Resources, Legal, Business Development, Finance, Corporate Communication and Public Affairs.  All payments made by a Party to a Third Party in connection with the performance of its activities under the Co-Development Plan and Budget shall be charged as Development Costs at such Party’s actual out-of-pocket cost.  Expenses incurred by a Party for equipment, materials and supplies utilized in performing its activities under the Co-Development Plan and Budget shall not be separately charged as Development Costs, except for those expenses incurred by a Party, with the prior written consent of the JSC as set forth in the Co-Development Plan and Budget, in the purchase or making of equipment, materials or supplies (other than common laboratory supplies, e.g., pipettes, test tubes, petri dishes, reagents, and the like) that are to be used exclusively in connection with the performance of such Party’s activities under the Co-Development Plan and Budget (e.g., laboratory animals, placebo supplies, etc.), which expenses shall be charged as Developments Cost at such Party’s actual out-of-pocket expense incurred in purchasing or making such equipment, materials or  supplies.

 

1.17                            Diligence Summary ” shall mean, with respect to particular Target, a summary of research, development and commercialization activities with respect to such Target that (i) were performed by the reporting Party or its Third Party collaborators in the previous twelve (12) month period (or shorter period from the prior report or relevant Target designation, if applicable), and (ii) as of the date the Diligence Report, are planned in good faith for the following twelve (12) month period.  For clarity, it is understood and acknowledged that in

 

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providing a Diligence Report, a Party shall not be required to disclose scientific results, specific research activities or the identity of any Third Party collaborator or potential collaborator, but shall at a minimum provide a summary of the total number of FTEs dedicated or planned to be dedicated to the discovery, optimization, development and commercialization of Collaboration Compounds that are specifically directed at the relevant Target, and a summary of the functional allocation of such FTEs.

 

1.18                            Exclusivity Period ” shall mean: (i) with respect to Biogen Idec, the period from the Effective Date until the end of the Research Term, and (ii) with respect to Sunesis the period from the Effective Date until one year following the end of the Research Term.

 

1.19                            Field ” shall mean the treatment, prevention and/or diagnosis of disease in humans through modulation of the Collaboration Targets.  For the avoidance of doubt, the scope of the Field shall not extend to activities of the Parties with protein, peptide or nucleic acid therapeutics directed to biological targets.  The term peptide therapeutics in the preceding sentence shall mean peptides having a molecular weight greater than 1,000 daltons.

 

1.20                            FTE ” shall mean, with respect to a Party, the equivalent of the work time of a full-time scientist or a full-time project team leader over a twelve-month period (including normal vacations, sick days and holidays), equal to at least [*] ([*]) weeks of work.  In the case of less than a full-time person, the portion of an FTE year devoted by such person to the Research Program shall be determined by dividing the number of days during any twelve-month period devoted by such person to the Research Program by the total number of working days of such person’s full-time scientist during such twelve-month period.  “FTE Rate” for both Parties shall mean $[*] per annum per FTE from the Effective Date through December 31, 2005.  Thereafter, the FTE Rate will be adjusted by the Inflation Index.  As used herein, “Inflation Index” shall mean the percentage increase in the Consumer Price Index for all Urban Consumers, as published by the U.S. Department of Labor, Bureau of Statistics, since the Effective Date.

 

1.21                            Gross Sales ” shall mean the gross amount invoiced by either Party or its Affiliates or permitted Sublicensees for sales of a product.  However, Gross Sales shall not include amounts received by such Party (or any of its Affiliates) from transactions with an Affiliate or Sublicensee, where the product in question will be resold by such Affiliate or Sublicensee to an independent Third Party distributor, agent or end user and such amounts received by the Affiliate or Sublicensee from such resale is included in Gross Sales.

 

1.22                            Kinase ” shall mean a human enzyme, the primary biological function of which is to catalyze transfer of phosphate from adenosine triphosphate.

 

1.23                            Kinase-Active Fragment ” shall mean a non-tethered intermediate compound of a tethered compound (as that term is described in U.S. Patent number 6,335,155 B1), where such tethered compound (i) is either (A) a compound that binds to the purine binding site of a Kinase, or (B) a compound that binds to the adaptive region of a Kinase; (ii) is actually made or used by either Party alone or by both Parties jointly during the Research Term in the course of activities

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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directed to a Target that is then a Collaboration Target in the performance of the Research Program in accordance with the then-current Research Plan; and (iii) exhibits structure activity relationships and specific binding to one or more Kinase.  For clarity, “intermediate compound” as used in this Section 1.23 shall mean that portion of the tethered compound which does not contain the linking or tethering moiety.

 

1.24                            Know-How ” shall mean any data, inventions, methods, proprietary information, processes, techniques, technology, or material (including biological or other materials).

 

1.25                            Licensed Pre-Existing Technology ” shall mean all Licensed Pre-Existing Patents and Licensed Pre-Existing Know-How.

 

1.25.1                   Licensed Pre-Existing Patents ” shall mean any patent or patent application directed at or comprising compositions of matter that modulate Targets and/or methods of use thereof in modulating Targets owned or controlled by Sunesis at any time after the Effective Date but prior to three (3) months after the Effective Date, as well as any divisions, continuations, continuations-in-part, reissues, reexaminations, extensions or other governmental actions which extend any of such patent applications or patents, and any substitutions, confirmations, registrations, revalidations or foreign counterparts of any of the foregoing.

 

1.25.2                   Licensed Pre-Existing Know-How ” shall mean any Know-How specifically related to Licensed Pre-Existing Compounds owned or controlled by Sunesis at any time after the Effective Date but prior to three (3) months after the Effective Date.

 

1.26                            NDA ” shall mean a New Drug Application (or its equivalent), as defined in the U.S. Food, Drug and Cosmetic Act and the regulations promulgated thereunder, or any corresponding or similar application, registration or certification in any jurisdiction for marketing authorization of a Product.

 

1.27                            Net Sales ” shall mean, with respect to a product, Gross Sales less applicable Sales Returns and Allowances.

 

If a sale, transfer or other disposition with respect to a product is made for consideration other than cash or is not at arm’s length, then the Net Sales from such sale, transfer or other disposition shall be the arm’s length fair market value thereof.  For purposes of this Agreement, “sale” shall mean any transfer or other distribution or disposition, but shall not include transfers or other distributions or dispositions of product, at no charge, for pre-clinical, clinical or regulatory purposes or in connection with patient assistance programs or other charitable purposes or to physicians or hospitals for promotional purposes.

 

In the event that a product is sold in the form of a Combination Product, Net Sales for the Combination Product shall be determined by multiplying actual Net Sales of the Combination Product (determined by reference to the definition of Net Sales set forth above) during the royalty payment period by the fraction A/A+B where A is the average sale price of products containing the Target Selective Compound, or Other Compound as is contained in such Combination Product as the sole active drug substance when sold separately in finished form (an “Agreement Product”), and B is the average sales price of products containing only the other active ingredients when sold separately in finished form, in each case during the applicable

 

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royalty payment period in the country in which the sale of the Combination Product was made, or if sales of both types of products did not occur in such period, then in the most recent royalty payment period in which sales of both occurred.  Where the Agreement Product is sold separately in finished form but the other ingredients are not, Net Sales for the Combination Product shall be determined by multiplying actual Net Sales of the Combination Product (determined by reference to the definition of Net Sales set forth above) during the royalty payment period by the ratio of the average per-unit sale price of the Agreement Product when sold separately in finished form to the average per-unit Net Sales of the Combination Product, in each case during the applicable royalty payment period in the country in which the sale of the Combination Product was made.  Where the other active ingredients are sold separately in finished form but the Agreement Product is not, Net Sales for the Combination Product shall be determined by multiplying actual Net Sales of the Combination Product (determined by reference to the definition of Net Sales set forth above) during the royalty payment period by the difference obtained by subtracting from one (1) the ratio of the average per-unit sale price of products containing only the other active ingredient when sold separately in finished form to the average per-unit Net Sales of the Combination Product, in each case during the applicable royalty reporting period in the country in which the sale of the Combination Product was made.  In the event that such average sales price cannot be determined for either of the Agreement Product or for products containing only the other active ingredient included in the Combination Product, Net Sales for purposes of determining payments under this Agreement shall be determined by good faith negotiations between the Parties.

 

1.28                            Phase I ” shall mean human clinical trials, the principal purpose of which is the preliminary evaluation of safety in healthy individuals as more fully defined  in 21 C.F.R. §312.21(a) or similar clinical study in a country other than the United States.  An initial study in patients where the primary purpose is the preliminary evaluation of safety will be considered a Phase I study.

 

1.29                            Phase II ” shall mean human clinical trials conducted on a limited number of patients for the primary purpose of evaluation of both clinical efficacy and safety, and/or to obtain a preliminary evaluation of the dosage regimen, as more fully defined in 21 C.F.R. §312.21(b).

 

1.30                            Phase III ” shall mean human clinical trials, the principal purpose of which is to establish substantial evidence of both safety and efficacy in patients with the disease or condition being studied, as more fully defined in 21 C.F.R. §312.21(c) or similar clinical study in a country other than the United States.  Phase III shall also include any other human clinical trial intended to serve as a pivotal trial to support the submission of an application for regulatory approval.

 

1.31                            Product ,” “ Non-Kinase Other Biogen Idec Product ,” “ Other Biogen Idec Product ,” and “ Sunesis Product ” shall have the following meanings:

 

1.31.1                   Non-Kinase Other Biogen Idec Product ” shall mean an Other Biogen Idec Product that does not contain any Other Compounds that are directed at a Kinase.

 

1.31.2                   Other Biogen Idec Product ” shall mean a pharmaceutical preparation for sale by prescription, over-the-counter, or any other method for all uses in humans and/or

 

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animals, in which Biogen Idec or its Affiliates incorporates one or more Other Compound(s) as an active ingredient, and does not incorporate any Target Selective Compounds as an active ingredient.  It is understood that Other Biogen Idec Products containing different active ingredient(s) (i.e. a different active ingredient or an additional active ingredient) or a different formulation shall be deemed different “Other Biogen Idec Products”.

 

1.31.3                   Product ” shall mean a pharmaceutical preparation for sale by prescription, over-the-counter, or any other method for all uses in humans and/or animals, which incorporates one or more Target Selective Compound as an active drug substance.  It is understood that Products containing different active ingredient(s) (i.e. a different active ingredient or an additional active ingredient) or a different formulation shall be deemed different “Products”.

 

1.31.4                   Sunesis Product ” shall mean a pharmaceutical preparation for sale by prescription, over-the-counter or any other method for all uses in humans and/or animals, in which Sunesis or its Affiliates incorporates an Other Compound as an active ingredient.

 

1.32                            Regulatory Approval ” shall mean approval of the health regulatory agency in a country (FDA in the U.S. and comparable authority outside the U.S.) necessary for the marketing and sale of a product in the applicable country.  As used herein, “Regulatory Approval” shall not include pricing or reimbursement approval.

 

1.33                            Research Program ” shall mean the activities undertaken by the Parties pursuant to the Research Plan, during the Research Term.

 

1.34                            Research Term ” shall mean the period commencing on the Effective Date and ending on the later of (i) the four (4) year anniversary of the Effective Date, or (ii) if extended in accordance with Section 2.3 below, the end of the last one (1) year extension period; provided that the Research Term shall in all events terminate upon an earlier termination of the Agreement in accordance with Article 14 below.

 

1.35                            Sales Returns and Allowances ” shall mean, with respect to a specific Product, Sunesis Product or Other Biogen Idec Product, the sum of (a) and (b), where:  (a) is a provision, determined by a Party under U.S. GAAP for sales of such product for (i) trade, cash and quantity discounts on such product (other than price discounts granted at the time of invoicing and which are already included in the determination of Gross Sales), (ii) credits or allowances given or made for rejection or return of, and for uncollectable amounts on, previously sold product or for rebates or retroactive price reductions (including Medicare, Medicaid and similar types of rebates and chargebacks), (iii) taxes, duties or other governmental charges levied on or measured by the billing amount for such product, as adjusted for rebates and refunds (excluding income and franchise taxes), (iv) charges for freight and insurance directly related to the distribution of such product, to the extent included in Gross Sales, and (v) credits for allowances given or made for wastage replacement, indigent patient and any other sales programs agreed to by the Parties for such product; and (b) is a periodic adjustment of the provision determined in (a) to reflect amounts actually incurred by a Party for items (i), (ii), (iii), (iv) and (v) in clause (a).

 

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1.36                            Selectivity Parameters ” shall mean, with respect to a particular Target, the parameters  necessary to objectively determine whether a compound is Target Selective against such Target, including the following: (i) the relevant cell-based assay, and assay conditions and criteria related thereto, and (ii) the relevant biochemical assay, and assay conditions and criteria related thereto, including without limitation the ATP concentration (expressed as a factor of K M ) to be used in such biochemical assay.

 

1.37                            Sublicensee ” shall mean a Third Party expressly licensed by a Party to make, use, import, offer for sale or sell Product, Sunesis Product or Other Biogen Idec Product, as applicable.  The term “Sublicensee” shall not include distributors (i.e. a Third Party who purchases product from a Party for resale).

 

1.38                            Sunesis Core Technology ” shall mean all patents, patent applications, and invention disclosures (all as listed on Exhibit 1.38) and all information, materials and other subject matter, and improvements thereof, relating to (i) mutants or the use thereof in screening , (ii) the use of novel protein engineering techniques and their application in drug discovery, (iii) target-directed fragment discovery and maturation to produce drug leads, including monophores, extenders and fragments and monophore, extender and fragment libraries for such purposes, or (iv) covalent tethering and techniques related thereto (e.g. NMR, X-ray, mass spec. AUC, Biacore) and its use to discover fragments and test binding hypotheses of fragments and leads: (a) controlled by Sunesis and/or its Controlled Affiliates prior to the Effective Date or during the Research Term; or (b) made by Biogen Idec in the course of activities directed to the discovery, research, or development of Collaboration Compounds; provided, in the case of (b) that such item was made using or derived from Sunesis Core Technology.  Sunesis Core Technology shall also include any divisions, continuations, continuations-in-part, reissues, reexaminations, extensions or other governmental actions which extend any of the patent applications or patents in (a) or (b) above, and any substitutions, confirmations, registrations, revalidations or foreign counterparts of any of the foregoing.

 

1.39                            Synthesize, ” “ Synthesis ” or “ Synthesized ” shall mean, with respect to a chemical composition, the act of (i) first physical synthesis of such chemical composition, or (ii) if such composition had previously been first actually synthesized, first physically establishing, in a relevant assay, that such composition is Target Selective against a specific Target.  For avoidance of doubt Synthesize shall not include chemical compositions synthesized in vivo .

 

1.40                            Target ,” “ [*]Target ,” “ Collaboration Targets ,” “ Non-Kinase Target ,” “ Other Biogen Idec Target ,” “ Raf/[*] Target ” and “ Sunesis Target ” shall have the meanings set forth below:

 

1.40.1                   [*] Target ” shall mean the human [*] protein kinase together with the [*] protein family members [*]-A, [*]-B, and [*]-C.

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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1.40.2                   Collaboration Targets ” shall mean (i) the Raf/[*] Target, and (ii) those additional Targets that are designated as Collaboration Targets by Biogen Idec in accordance with Section 2.5 during the Research Term.

 

1.40.3                   Non-Kinase Target ” shall mean a Target that is not a Kinase.

 

1.40.4                   Other Biogen Idec Target ” shall mean a Target that has been designated as an Other Biogen Idec Target in accordance with Section 2.5.6 or 2.5.7, provided that any Target that is removed as an Other Biogen Idec Target pursuant to Section 2.5.8 after being so designated shall no longer be considered a Other Biogen Idec Target.

 

1.40.5                   Raf/[*] Target ” shall mean the human Raf protein kinase together with the Raf protein family members [*] and [*], and the [*] protein [*] and [*].

 

1.40.6                   Sunesis Target ” shall mean a Sunesis Target that has been designated as a Sunesis Target in accordance with Section 2.5.3, 2.5.6 or 2.5.7, provided that any Target that is removed as a Sunesis Target pursuant to Section 2.5.8 after being so designated shall no longer be considered a Sunesis Target.

 

1.40.7                   Target ” shall mean, except as described in Section 1.40.1 and 1.40.5 above, a single human protein, and with respect to Collaboration Targets, such other variant species of such protein as are determined in accordance with Section 2.5.9 below.

 

1.41                            Target Selective ” shall mean, when used to describe a chemical compound with respect to a specified Target, that such compound exhibits an IC 50 at or below [*] ([*]) in a relevant cell-based assay, and below the [*] of the IC 50 of (i) [*] ([*]) in an enzyme assay (measured at ATP concentrations [*] ([*]) times the K M ) or (ii) [*] ([*]) times the IC 50 of the selected lead.  For the purposes of the foregoing, the relevant cell-based and enzyme assays shall be as specified pursuant to Section 2.5.9(b), and the IC 50 referenced in (ii) shall be measured in the same enzyme assay as (i).

 

1.42                            Third Party ” shall mean any person or entity other than Sunesis and Biogen Idec, and their respective Affiliates.

 

1.43                            Valid Claim ” shall mean (i) a claim of an issued and unexpired patent (or the equivalent in a supplementary protection certificate), which has not lapsed or become abandoned or been declared invalid or unenforceable by a court of competent jurisdiction or an administrative agency from which no appeal can be or is taken or (ii) a claim of a pending patent application, filed in good faith, which claim shall not have been canceled, withdrawn, abandoned or rejected by an administrative agency from which no appeal can be taken; provided that no more than seven (7) years has passed since the filing date for such patent application.

 

1.44                            Additional Terms .  In addition to the foregoing, the following terms shall have the meaning defined in the corresponding Section below:

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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Definition

 

Section
Defined

 

Actual Amount

 

7.1.2

 

Available

 

Exhibit 2.5

 

Biogen Idec Competitor

 

3.2.4(c)

 

Change in Control

 

3.2.4(b)

 

Co-Development Plan and Budget

 

3.2.2

 

Co-Funded Product

 

3.2.1

 

Co-Funding Percentage

 

3.2.3

 

Controlling Party

 

10.3.4

 

Cooperating Party

 

10.3.4

 

Co-Promoted Product

 

4.2

 

Co-Promotion Option

 

4.2

 

Election Notice

 

3.2.1

 

Election Notice

 

4.2.1

 

Eligible Collaboration Targets

 

3.2.4(a)

 

Indemnitee

 

13.3

 

Indemnitor

 

13.3

 

Indication

 

7.4.2(b)

 

Initial Development Plan

 

3.3.1

 

Initial Territory

 

3.2

 

Infringement Action

 

10.3.4

 

JCC

 

5.5.1

 

JDC

 

5.4.1

 

JRC

 

5.3.1

 

Joint Patent Committee

 

10.2.2

 

Joint Patent Counsel

 

10.2.2

 

Joint Steering Committee

 

5.1

 

Joint Sub-Committee

 

5.2

 

Liabilities

 

13.1

 

Milestone Compound

 

7.4.1

 

Milestone Target

 

7.4.1

 

Notice Period

 

3.2.1

 

Other Biogen Idec Technology

 

6.2.4

 

Other Party

 

Exhibit 2.5

 

Phase II Drug Collaboration

 

2.7.1

 

Phase II Notice

 

3.2.1

 

post Phase I Development Costs

 

3.2.4(d)

 

Product Team

 

3.3

 

Projected Start Date

 

3.2.1

 

Proposed Target

 

Exhibit 2.5

 

Proposing Party

 

Exhibit 2.5

 

Raf/[*] Patents

 

10.1.1(a)

 

Receiving Party

 

2.5.6

 

Requesting Party

 

2.5.6

 

Research plan

 

2.2

 

Reverted Product

 

3.5

 

Royalty Products

 

7.5.1

 

Sales and Marketing Plan

 

5.5.2

 

Series C-2

 

7.2.2

 

Subject Infringement

 

10.3.1

 

Target selection pool

 

2.5.1

 

Term

 

14.1

 

 

ARTICLE 2
RESEARCH PROGRAM AND TARGET DESIGNATION

 

2.1                                  General; Conduct of Research .  Subject to the terms and conditions set forth herein, the Parties agree to conduct research under the Research Plan on a collaborative basis.  Sunesis and Biogen Idec shall each conduct the Research Program in a good and scientific manner, and in compliance in all material respect with all requirements of applicable laws, rules and regulations and all applicable standard laboratory practices to attempt to achieve their objectives efficiently and expeditiously.  Sunesis and Biogen Idec each shall proceed diligently with the work set out in the Research Program by using their good faith efforts.  Sunesis agrees to dedicate to the Research Program the number of Sunesis FTEs specified in the Research Plan;

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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provided however, Sunesis shall not be obligated to incur costs in performing its activities under the Research Program in excess of the amounts specified under Section 7.1.

 

2.2                                  Research Plan .  The Parties will conduct the Research Program in the Field in accordance with a written plan approved by the JRC (the “Research Plan”).  The Research Plan shall establish: (i) the scope of the research activities which will be performed; (ii) the research objectives, work plan activities and schedules with respect to the Research Program; and (iii) the respective obligations of the Parties with respect to the Research Program.  The Research Plan shall be reviewed on an ongoing basis and may be amended by approval of the JRC from time to time as it deems necessary or appropriate.  The initial Research Plan is attached hereto as Exhibit 2.2.

 

2.3                                  Term of Research Program .  The Research Program shall commence on the Effective Date and unless earlier terminated as described in Article 14, continue for an initial period of four (4) years (i.e. forty-eight (48) months from the Effective Date).  Biogen Idec will have the option to extend the Research Term for up to two additional one (1) year periods at the level of research funding by Biogen Idec and FTE support by Sunesis specified in Section 7.1, by providing Sunesis with written notice and full payment of the technology access fee set forth in Section 7.2.1(b) at least three (3) months before the end of the initial four (4) year Research Term or the then-current extension period, as applicable.

 

2.4                                  Collaboration Target Exclusivity .  Subject to Section 2.7 and Section 3.5 below, during the Exclusivity Period Sunesis shall collaborate exclusively with Biogen Idec with respect to each Collaboration Target and with respect to Target Selective Compounds.  Subject to Section 2.7, during the Exclusivity Period Biogen Idec shall collaborate exclusively with Sunesis with respect to each Collaboration Target and with respect to Target Selective Compounds.  Notwithstanding the foregoing, neither Party shall be deemed in breach of this Section 2.4 if it engages in activities, or licenses a Third Party, with respect to a compound that does not specifically and directly modulate a Collaboration Target, to the knowledge of such Party at the time such Party engages in such activities or granted such license (or if earlier, at the time such Party first became obligated to engage in such activities or grant such license).  It is understood and acknowledged, however, that nothing in the preceding sentence shall be deemed to limit or modify the obligations set forth in Section 6.6 hereof or the licenses granted in Article 6.  In addition, it is understood and acknowledged that nothing in this Section 2.4 shall restrict either Party from research, development or commercialization activities with protein or peptide therapeutics directed to Collaboration Targets, either through an internal program or a bona fide collaboration with a Third Party.  The term peptide therapeutics in the preceding sentence shall mean peptides having a molecular weight greater than 1,000 daltons.

 

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2.5                                  Designation of Collaboration Targets under the Research Program .  As of the Effective Date, the Raf/[*] Target shall be the only Collaboration Target.  Biogen Idec shall have the right to designate up to a total of five (5) additional Collaboration Targets during the Research Term in accordance with Sections 2.5.1 and 2.5.2, subject to such Targets being then Available pursuant to Exhibit 2.5 attached hereto.  In addition, Biogen Idec may have the right to designate an additional Target to be added thereto in accordance with Section 2.5.5, subject to such designated Target being then Available.

 

2.5.1                         Target Selection Pool .  On or prior to the Effective Date, Biogen Idec shall identify [*] ([*]) Targets other than the Raf/[*] Target as candidates for designation as Collaboration Targets (the “Target Selection Pool”).  Within three (3) months after the Effective Date, Biogen Idec shall identify [*] ([*]) additional Targets (other than the Raf/[*] Target and those Targets already in the Target Selection Pool) for inclusion in the Target Selection Pool.  Promptly upon receiving notification of each such proposed Collaboration Target candidate, Sunesis shall determine in good faith whether such Targets are then Available in accordance with Exhibit 2.5 attached hereto and inform Biogen Idec in the event that one or more such Targets are not Available (in which case such Target or Targets shall be deemed removed from the Target Selection Pool).  Biogen Idec shall have the opportunity to provide alternate proposals for any such Targets that are not Available, and Sunesis shall then determine whether such alternate Targets are then Available.  This process shall continue until Biogen Idec has proposed a total of [*] ([*]) Available Targets in the Target Selection Pool.

 

2.5.2                         Designation of Collaboration Targets .  Promptly upon determining that a Target in the Target Selection Pool is Available, the Parties shall undertake to clone such Target pursuant to the Research Program, and shall promptly provide the JRC with such information and data related to such cloned Targets as has then been generated under the Research Plan.  In the event that [*] ([*]) or more of the Targets in the Target Selection Pool have been successfully cloned and expressed as of twelve (12) months after the Effective Date, then Biogen Idec shall designate, in its sole discretion, [*] ([*]) Targets from the Target Selection Pool as Collaboration Targets, by so notifying Sunesis in writing on or before such date.  In the event that less than [*] ([*]) of the Targets in the Target Selection Pool have been successfully cloned and expressed as of twelve (12) months after the Effective Date, then Biogen Idec shall designate the Targets from the Target Selection Pool that have been successfully cloned and expressed as Collaboration Targets.  In such event the JRC shall promptly convene to determine whether to proceed with efforts related to the Targets remaining in the Target Selection Pool or how the Parties should otherwise proceed diligently towards designation of [*] ([*]) Targets by Biogen Idec as Collaboration Targets pursuant to this Section 2.5.2, and the JRC shall revise the Research Plan to reflect such determination.

 

2.5.3                         Initial Sunesis Target Selection .  At any time following the selection by Biogen Idec of Biogen Idec’s initial [*] ([*]) Targets for the Target Selection Pool as provided under Section 2.5.1 above, but prior to the first anniversary of the Effective Date, Sunesis may

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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designate one (1) Target as a Sunesis Target, provided such Target is not one of the Targets in the Target Selection Pool.

 

2.5.4                         Biogen Idec Additional Collaboration Target Selection .  At any time following the first anniversary of the Effective Date, but during the Research Term, after the initial Collaboration Targets have been selected under Section 2.5.2 above, Biogen Idec may designate one (1) additional Target as a Collaboration Target, provided such Target is then Available.  Promptly upon receiving notification of such proposed Collaboration Target, Sunesis shall determine in good faith whether such Target is then Available in accordance with Exhibit 2.5 attached hereto.  In the event that such Target is not Available, Sunesis shall so inform Biogen Idec, Biogen Idec shall have the right to provide an alternate proposal to Sunesis during the Research Term, and Sunesis shall then determine whether such alternate Target is then Available.  This process shall continue until either Biogen Idec designates an Available Target as a Collaboration Target, or the Research Term expires or terminates, whichever is earlier.

 

2.5.5                         Biogen Idec Possible Seventh Collaboration Target Selection .  It is understood and agreed that the Parties shall frequently counterscreen Collaboration Compounds, and that during the Research Term the Parties shall promptly share the results of any such counterscreening to the extent it is undertaken in the course of performing the Research Program.  At any time during the Research Term after the second anniversary of the Effective Date, in the event that the Hit Compound Criteria have not been achieved with respect to any of Biogen Idec’s six (6) Collaboration Targets (Raf/[*] plus the five (5) others), then Biogen Idec may designate one (1) additional Target as a Collaboration Target, provided such Target is then Available.  Promptly upon receiving notification of such proposed Collaboration Target, Sunesis shall determine in good faith whether such Target is then Available in accordance with Exhibit 2.5 attached hereto.  In the event that such Target is not Available, Sunesis shall so inform Biogen Idec, Biogen Idec shall have the right to provide an alternate proposal to Sunesis during the Research Term, and Sunesis shall then determine whether such alternate Target is then Available.  This process shall continue until either (i) Biogen Idec designates an Available Target as a Collaboration Target, (ii) the Research Term expires or terminates, or (iii) the Hit Compound Criteria are achieved with respect to any of Biogen Idec’s six (6) Collaboration Targets, whichever is earliest.

 

2.5.6                         Designation of Other Biogen Idec Targets and Sunesis Targets .  Subject to the terms and conditions of this Agreement, at any time following the first anniversary of the Effective Date and during the Term of this Agreement, either Party shall have the opportunity to obtain at any time certain exclusive license rights as described in Section 6.3 below with respect to a particular Target that is not then a Collaboration Target, an Other Biogen Idec Target or a Sunesis Target, provided (i) such Target is then Available as determined in accordance with Exhibit 2.5, and (ii) at the time of designation of such Target, the designating Party is either (A) exercising reasonable research or development efforts with respect to Collaboration Compounds that are specifically directed at such Target, either through an internal program or a bona fide collaboration with a Third Party, or (B) actively and in good faith engaged in negotiations with a Third Party regarding a collaboration directing research or development efforts at Collaboration Compounds that are specifically directed at such Target.  A Party (the “Requesting Party”) requesting to designate a Target (a “Requested Target”) as either a Sunesis Target or an Other Biogen Idec Target shall provide the other Party (the “Receiving Party”) in writing with a

 

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Diligence Summary and proposed Selectivity Parameters for the Requested Target.  Upon receiving such materials from a Requesting Party, the Receiving Party shall promptly and in good faith determine whether the Requested Target is Available in accordance with Exhibit 2.5 attached hereto and inform the Requesting Party of the results of such determination.  Upon notice to the requesting Party that such Target is Available, such Target shall be designated as an Other Biogen Idec Target or a Sunesis Target, as applicable.  Each Party may exercise this right an unlimited number of times, provided that neither Party shall be required to obtain an exclusive license from the other Party.

 

2.5.7                         Not-Available Targets .  In the event that a Requested Target is determined to be not-Available by the Receiving Party, the Parties shall have the alternating right, as described below, to require the other Party to make such Target Available and to receive the exclusive license rights described under Section 6.3 below.  The first time a Requesting Party under Section 2.5.6 above is informed by the Receiving Party that a Requested Target is not-Available, Biogen Idec shall have the right for thirty (30) days, but not the obligation, to require Sunesis (irrespective of whether Sunesis is the Requesting or Receiving Party) to make the Target Available as an Other Biogen Idec Target and to require Sunesis to grant Biogen Idec the exclusive license rights described in Section 6.3.  In the event that Biogen Idec does not elect during such thirty (30) days to require Sunesis to make the Target Available as an Other Biogen Idec Target, then Sunesis shall have the right, but not the obligation, for thirty (30) days to require Biogen Idec to make the Target Available as a Sunesis Target and to require Biogen Idec to grant Sunesis the exclusive license rights described in Section 6.3.  In the event that Biogen Idec exercises its right described above to require Sunesis to make a Requested Target Available as an Other Biogen Idec Target and to require Sunesis to grant Biogen Idec the exclusive license rights described in Section 6.3, then the next time a Requested Target is determined to be not-Available then Sunesis shall have the first right to require Biogen Idec to make such Target Available as a Sunesis Target on the same terms and conditions described above.  The rights described above shall alternate every time one Party requires the other Party under this Section 2.5.7 to grant the exclusive license rights described in Section 6.3.  Notwithstanding the foregoing, this Section 2.5.7 shall not apply in the event that the [*]Target is a Requested Target that is determined to be not-Available.  As used in this Section 2.5.7, a Party exercising an option to “require the other Party to make a Target Available” shall mean that the exercising Party is designating such Target as an Other Biogen Idec Target or Sunesis Target, as applicable, notwithstanding the fact that such Target would otherwise not be Available.  For clarity, the fact that a Party that is “required to make a Target Available” shall not mean that such Party is restricted from research, development or commercialization of compounds directed at such Target, except as otherwise set forth in Section 2.4 or Article 6.  It is understood and acknowledged that any exclusive license grant that is required under this Section 2.5.7 shall be subject to any licenses or sublicenses granted to any Third Party in accordance with Sections 6.1.3 or 6.5 prior to such exclusive license grant.

 

2.5.8                         Other Biogen Idec Targets and Sunesis Targets .  Biogen Idec and Sunesis agree to use Commercially Reasonable and Diligent Efforts to research, develop and commercialize Other Biogen Idec Products and Sunesis Products, respectively (excluding for

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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purposes of this Section 2.5.8, Sunesis Products directed at the Sunesis Target designated under Section 2.5.3), for each Other Biogen Idec Target and Sunesis Target for which they receive the exclusive license rights described in Section 6.3.  In the event that a Party fails to use Commercially Reasonable and Diligent Efforts to research, develop and commercialize either an Other Biogen Idec or Sunesis Product specifically directed at a particular Other Biogen Idec Target or Sunesis Target (excluding for purposes hereof, the Sunesis Target designated under Section 2.5.3), the sole remedy for such breach shall be that such Target shall cease to be an Other Biogen Idec Target or Sunesis Target and the exclusive licenses rights granted to such Party under Section 6.3 with respect to such Other Biogen Idec Target or Sunesis Target shall terminate.  After designation of a Requested Target as an Other Biogen Idec Target or Sunesis Target (excluding for purposes of this Section 2.5.8, the Sunesis Target designated under Section 2.5.3), the Party so designating shall provide the other Party with a Diligence Summary six months after such designation, and upon each anniversary of such date for so long as such Target remains an Other Biogen Idec Target or Sunesis Target, as applicable.

 

2.5.9                         Establishment of Criteria and Selectivity Parameters; Staffing of Sunesis FTEs .

 

(a)                                   Promptly following any designation of a Collaboration Target pursuant to this Section 2.5, the Parties shall establish, the definition and scope of such Collaboration Target, as well as any additional Target-specific criteria for a compound to be deemed a Hit Compound or Lead Compound for such Collaboration Target as provided in Section 1.13, provided that the JRC shall not have the authority to amend the Lead Compound Criteria with respect to the threshold affinity levels with respect to such Collaboration Target without the written agreement of the Parties.  In addition, in the event that Biogen Idec requests additional FTEs with respect to such Collaboration Target (above those provided for under this Agreement), the Parties shall mutually agree on whether additional Sunesis FTEs shall be funded to conduct activities under the Research Program with respect to such Collaboration Target.

 

(b)                                  In addition to the foregoing, the Parties shall establish the Selectivity Parameters for each Collaboration Target.  The Selectivity Parameters for a specific Collaboration Target may be amended after initial designation by the JRC only through mutual written agreement of the Parties.  The Selectivity Parameters for all Collaboration Targets shall be set forth in Exhibit 2.5.9 attached hereto; upon request by either Party from time to time, Exhibit 2.5.9 shall be updated to reflect the Selectivity Parameters for the then-current Collaboration Targets.

 

(c)                                   In the event that an Other Biogen Idec Target or a Sunesis Target is designated during the Term of this Agreement, the Parties shall mutually agree on (i) the definition and scope of such Target, and (ii) the Selectivity Parameters for such Target.

 

2.5.10                   Nature of Collaboration Targets .  For clarity, it is understood that as of the Effective Date, the Parties are primarily interested in Kinases as Collaboration Targets; however, the Collaboration Targets designated under this Section 2.5 may be Kinases or Non-Kinase Targets.

 

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2.6                                  Designation of Lead Compounds and Development Candidates .   From time to time during the Research Term, Biogen Idec may approve the designation of any Target Selective Compound within the Field as a Lead Compound for purposes of Section 1.41 by written notice to Sunesis, provided such Target Selective Compound meets the Lead Compound Criteria with respect to a Collaboration Target.  Each such notice shall set forth in writing the IC 50 concentrations that such designated Lead Compound exhibits with respect to the relevant cell-based and enzyme assays established for such Collaboration Target under Section 2.5.9.  Biogen Idec shall have complete discretion as to the designation of any Target Selective Compound within the Field as a Development Candidate by providing written notice to Sunesis of such designation.  Biogen Idec’s right to specify a Development Candidate shall survive the expiration of the Research Term.  Notwithstanding the foregoing, it is understood and agreed that if Biogen Idec undertakes GLP toxicity studies or GMP manufacturing with respect to a particular Target Selective Compound, such Target Selective Compound shall be deemed designated by Biogen Idec as a Development Candidate for the purposes of Sections 3.3 and 7.3.

 

2.7                                  Phase II Drug Collaborations; Excluded Compound Programs .

 

2.7.1                         Phase II Drug Collaborations .  Subject to the licenses granted under Article 6, notwithstanding Sections 2.4 and 6.6 and subject to the provisions of this Section 2.7: (i) Biogen Idec shall not be prohibited from collaborating with a Third Party on the development and commercialization of chemical compounds in-licensed from or controlled by such Third Party against a Collaboration Target, and (ii) Sunesis shall not be prohibited from collaborating with a Third Party on the development and commercialization of chemical compounds in-licensed from or controlled by such Third Party against a Collaboration Target; provided that in subsection (ii), such Collaboration Target is not an Eligible Collaboration Target, and in both subsections (i) and (ii) that such compounds are in Phase II clinical trials or later stage of development or commercialization at the time of initiation of such collaboration (each, a “Phase II Drug Collaboration”).  As of the Effective Date, except for those compounds listed on Exhibit 2.7.1, neither Party is party to a Phase II Drug Collaboration.  Each Party shall notify the other Party in writing upon entering into a Phase II Drug Collaboration.  Nothing in this paragraph is intended as the grant of a license by either Party to the other Party.

 

2.7.2                         Excluded Compound Programs .  Subject to the licenses granted under Article 6, in addition to the foregoing, notwithstanding Section 2.4 neither Party shall be prohibited from researching, developing or commercializing Excluded Compounds, with the proviso that Sunesis shall be subject to the provisions of Section 6.6 below.  Nothing in this paragraph is intended as the grant of a license by either Party to the other Party.

 

2.8                                  Reports; Records; Inspections .

 

2.8.1                         Reports .  Each Party shall keep the other Party informed of its progress and results in performing the Research Program.  Sunesis and Biogen Idec shall each provide the other, at least once quarterly, a written summary of research activities and results in connection with the Research Program.  In addition, each Party shall promptly provide the JRC in accordance with procedures to be agreed upon by the JRC with data and information pertaining to all Synthesized Compounds identified by such Party, including the chemical structures of such

 

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Synthesized Compounds and structure-activity data with respect thereto, and such other information as the Parties agree.

 

2.8.2                         Research Records .  Sunesis and Biogen Idec shall maintain records of the Research Program (or cause such records to be maintained) in sufficient detail and in good scientific manner as will properly reflect all work done and results achieved in the performance of the Research Program.

 

2.8.3                         Inspections .  During the Research Term, and for three (3) years thereafter, the Parties shall provide each other access to the records referred to in this Section, upon reasonable request, during ordinary business hours and subject to appropriate confidentiality agreement in the event that Third Party confidential information is involved.

 

2.8.4                         Clinical Data .  For the avoidance of doubt, nothing in this Section 2.8 shall obligate Biogen Idec to provide Sunesis with any clinical data generated with respect to a Product prior to delivery of a Phase II Notice in accordance with Section 3.2.1, or as otherwise explicitly provided in Article 3.

 

ARTICLE 3
PRODUCT DEVELOPMENT

 

3.1                                  Development by Biogen Idec .  Following the selection of each Development Candidate in accordance with Section 2.6 above, Biogen Idec shall be responsible for undertaking a development program aimed at ultimately seeking Regulatory Approval for any Products incorporating such Development Candidate.

 

3.2                                  Co-Funding Option .  Sunesis shall have the right, on a Product-by-Product basis, to elect to fund a portion of post Phase I Development Costs of Products specifically directed to Eligible Collaboration Targets in all countries worldwide other than Japan (the “Initial Territory”).  In the event that Sunesis elects to exercise its Co-Funding Option with respect to the Initial Territory for a particular Product pursuant to the preceding sentence, then Sunesis shall have the right to elect to fund a portion of post Phase I Development Costs of such Product in Japan, all in accordance with this Section 3.2.

 

3.2.1                         Election .  For so long as Sunesis continues to have a Co-Funding Option, Biogen Idec shall notify Sunesis at least [*] ([*]) months, but not more than [*] ([*]) months, prior to initiation of the first Phase II trial for each Product in each of the applicable territories described above in Section 3.2 where the primary endpoint of such trial involves a preliminary determination of efficacy.  Such notice shall include the date by which such Phase II trial will start (the “Projected Start Date”), and shall include (i) a description in detail of the indication for which such Phase II trial will be directed, together with a comprehensive, detailed preliminary plan and budget estimates, prepared and provided in good faith, for the conduct of all further development of such Product (the “Initial Development Plan”), and (ii) all preclinical data for such Product, and the final report and access to all clinical data generated with respect to at least

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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one Phase I trial for such Product, as well as the final report and access to all clinical data generated with respect to all other Phase I trials of such Product initiated prior to the date of such notice that are necessary for, or form the basis of, the first Phase II trial of such Product (each, a “Phase II Notice”).  Sunesis may elect, by so notifying Biogen Idec in writing at least [*] ([*]) month prior to the Projected Start Date (the “Notice Period”), to participate in the further development of such Product in the applicable territory, as described in this Section 3.2 (such notice, the “Election Notice”).  Following the Phase II Notice and until the end of the Notice Period, Biogen Idec shall cooperate fully with Sunesis, and shall promptly provide Sunesis with access to such material information, to the extent such information is not included in the Initial Development Plan or otherwise has not been communicated previously to Sunesis, as Sunesis may reasonably request to enable Sunesis to make an informed decision whether to exercise its Co-Funding Option under this Section 3.2 with respect to such Product.  Such cooperation shall include, without limitation, consulting with Sunesis in good faith regarding the Initial Development Plan, and the financial, scientific and regulatory assumptions reflected therein.  In the event Sunesis exercises its Co-Funding Option with respect to a particular Product (such Product, a “Co-Funded Product”), the provisions of Sections 3.2.2 through 3.2.5 below shall apply with respect to such Co-Funded Product in the Co-Funded Territory.  The “Co-Funded Territory” shall consist of the Initial Territory for each Co-Funded Product, and in the event Sunesis elects to exercise its Co-Funding Option for Japan with respect to a particular Co-Funded Product, the Co-Funded Territory shall mean all territories worldwide for such Co-Funded Product.

 

3.2.2                         JDC .  For each Co-Funded Product, the Parties shall establish and maintain a JDC in accordance with Section 5.4 below, which shall be responsible for establishing the plan and budget for the development of each Development Candidate (each, a “Co-Development Plan and Budget”) and overseeing the implementation of such plan.  Such Co-Development Plan and Budget shall be comprehensive and shall fully describe at least the proposed activities related to ongoing preclinical studies, formulation, process development, clinical studies and regulatory plans, and other activities and timelines directed to obtaining the initial and subsequent Regulatory Approvals in each applicable country.  Unless otherwise specified in a Co-Development Plan and Budget amounts reflected for a full year shall be deemed budgeted in equal amounts for each calendar quarter of such year.

 

3.2.3                         Co-Funding Obligation .  In the event Sunesis exercises its Co-Funding Option with respect to a Product, Sunesis shall be obligated to reimburse Biogen Idec for a percentage (the “Co-Funding Percentage”) of post Phase I Development Costs for such Product, subject to the provisions of this Section 3.2.  It is understood and agreed that the Co-Funding Percentage shall initially be [*] percent ([*]%) for each Co-Funded Product. In addition the following shall apply:

 

(a)                                   The Co-Development Plan and Budget will be updated on a quarterly basis.  Promptly following the final Biogen Idec Board of Directors meeting each calendar year during the development activities for a particular Co-Funded Product or such other date as is mutually agreed by the Parties, the JDC shall update and amend the Co-Development Plan and

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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Budget for such Co-Funded Product for the subsequent year.  Biogen Idec shall provide Sunesis with reasonable opportunity to provide input into each Co-Development Plan and Budget, and , subject to Article 5, Biogen Idec shall reasonably consider Sunesis’ comments in establishing and updating each Co-Development Plan and Budget.

 

(b)                                  Within thirty (30) days after the end of each calendar quarter, Biogen Idec shall provide to Sunesis a statement reflecting the total post Phase I Development Costs incurred by Biogen Idec in accordance with the then-current Co-Development Plan and Budget during such calendar quarter with respect to each Co-Funded Product.  Within thirty (30) days after Sunesis’ receipt of such statement, Sunesis shall reimburse Biogen Idec for the applicable Co-Funding Percentage of the post Phase I Development Costs incurred by Biogen Idec during such calendar quarter for such Co-Funded Product.

 

(c)                                   Upon ninety (90) days written notice to Biogen Idec, Sunesis may terminate its Co-Funding Option for a particular Co-Funded Product.  In such event, Sunesis’ funding obligation under this Section 3.2.3 above shall apply only with respect to post Phase I Development Costs for activities conducted with respect to such Co-Funded Product prior to the  effective date of such termination.  Should Sunesis terminate its Co-Funding Option under this Section 3.2 with respect to a particular Co-Funded Product, (i) any royalties payable to Sunesis on such Co-Funded Product shall be paid in accordance with Section 7.5.1, subject to Section 7.5.2(b), and (ii) Sunesis shall relinquish its right to participate in the JDC pursuant to Section 5.4 and any right to its Co-Promotion Option under Section 4.2 for such Co-Funded Product.

 

(d)                                  Upon written notice to Biogen Idec at least ninety (90) days prior to the end of a budget year, Sunesis may elect to [*] its Co-Funding Percentage for a particular Co-Funded Product to either [*]% or [*]%, by so notifying Biogen Idec in writing, referencing this Section 3.2.3(d) and specifying such [*] percentage.  In such event, Sunesis shall receive a [*] royalty on Net Sales of such Co-Funded Product in accordance with the schedule set forth in Section 7.5.2(c) below and Sunesis’ Co-Promotion rights under Section 4.2 shall be correspondingly [*].  Upon such election, Sunesis’ previous Co-Funding Percentage under this Section 3.2.3 shall apply only with respect to post Phase I Development Costs for activities conducted with respect to such Co-Funded Product prior to the end of the budget year in which Sunesis provided notice of such [*], thereafter Sunesis’ co-funding obligation under this Section 3.2.3 shall apply to the applicable [*] Co-Funding Percentage of the post Phase I Development Costs with respect to such Co-Funded Product.  Sunesis may [*] its Co-Funding Percentage in accordance with this Section 3.2.3(d) more than once, provided that (i) Sunesis shall not be permitted to subsequently [*] its Co-Funding Percentage for such Co-Funded Product, and (ii) Sunesis may [*] its Co-Funding Percentage under this Section 3.2.3(d) no more than once per budget year.  As used herein, “budget year” shall mean a calendar year, provided that Biogen Idec shall have the right to change the budget year to coincide with Biogen Idec’s annual budget cycle, provided that Biogen Idec provide Sunesis with at least one hundred twenty (120) days notice of such change.

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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(e)                                   Notwithstanding the foregoing, in the event that Sunesis experiences a Change in Control, then Sunesis’ Co-Promotion rights under Section 4.2 and the right to participate in the JDC under Section 5.4 and any Product Teams under Section 3.3 shall terminate.  In addition:

 

(i)                                      With respect to any Co-Funded Product for which Sunesis has exercised its Co-Funding Option prior to such Change of Control, Sunesis’ rights and obligations under this Section 3.2.3 shall continue, provided that Biogen Idec shall no longer be obligated to provide the detailed plans required of a Co-Development Plan and Budget to Sunesis (or its successor entity), but shall provide Sunesis (or its successor entity) with annual budgets of post Phase I Development Costs for such Co-Funded Product.
 
(ii)                                   Sunesis’ Co-Funding Option with respect to future Products shall continue as well (i.e. with respect to Products that are not Co-Funded Products as of the date of such Change of Control), provided that Biogen Idec shall no longer be obligated to provide for each Product the detailed plans and clinical data required of an Initial Development Plan and Phase II Notice.  Biogen Idec shall, however, provide Sunesis (or its successor entity) with annual budgets of post Phase I Development Costs for such Co-Funded Product in accordance with the timetable for a Phase II Notice set forth in Section 3.2.1, and shall provide reasonable cooperation to Sunesis (or its successor entity) in evaluating such Product and the post Phase I Development Costs related thereto, including consulting with Sunesis (or its successor entity) in good faith regarding such annual budgets and the financial, scientific and regulatory assumptions reflected therein.
 

3.2.4                         Certain Terms .  As used in this Section 3.2, the following terms shall have the meanings set forth below:

 

(a)                                   “Eligible Collaboration Targets” shall mean up to two (2) Collaboration Targets.  Each Eligible Collaboration Target shall be determined upon exercise of the Co-Funding Option by Sunesis for a Product directed at a Collaboration Target, whereupon such Collaboration Target shall be deemed an Eligible Collaboration Target.  It is understood that there may be more than one (1) Co-Funded Product directed at a single Eligible Collaboration Target.

 

(b)                                  “Change in Control” shall mean with respect to Sunesis the closing of any of the following: (i) the sale or disposition of all or substantially all of the assets of Sunesis or its direct or indirect parent corporation to a Biogen Idec Competitor, (ii) the acquisition, directly or through a subsidiary, by a Biogen Idec Competitor of more than fifty percent (50%) of the outstanding shares of voting capital stock of Sunesis or its direct or indirect parent corporation, or (iii) the merger or consolidation of Sunesis or its direct or indirect parent corporation with or into a Biogen Idec Competitor, other than, in the case of this clause (iii), an acquisition or merger or consolidation of Sunesis or its direct or indirect parent corporation in which holders of shares of the voting capital stock of Sunesis or its direct or indirect parent corporation, as the case may be, immediately prior to the acquisition, merger or consolidation will have at least fifty percent (50%) of the ownership of voting capital stock of the acquiring Biogen Idec Competitor or the surviving corporation in such merger or consolidation, as the case may be, immediately after the merger or consolidation.

 

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(c)                                   “Biogen Idec Competitor” shall mean a Third Party: (i) whose revenues from sales of pharmaceutical products, on a consolidated basis in the last full fiscal year prior to the Change of Control, were in excess of US $[*], or (ii) that as of the closing of the Change of Control is commercializing, or conducting ongoing [*] or [*] with respect to, a therapeutic product which is [*] to one or more [*] which Biogen Idec is then commercializing, or conducting ongoing [*] or [*] with respect thereto.

 

(d)                                  “post Phase I Development Costs” shall mean, with respect to a particular Co-Funded Product, the Development Costs incurred by the Parties or their Affiliates after completion of Phase I trials for such Co-Funded Product in the Co-Funded Territory for such Co-Funded Product.  For the avoidance of doubt, (i) post Phase I Development Costs shall not include any Development Costs incurred by the Parties or their Affiliates for any subsequent Phase I trials, and (ii) Development Costs relating to activities directed at obtaining Regulatory Approval in Japan for a Co-Funded Product shall not be considered post Phase I Development Costs to the extent such Development Costs are incurred (A) prior to completion of the Phase I trials for such Co-Funded Product in Japan, or (B) if no Phase I trials are necessary or performed for such Co-Funded Product in Japan, then prior to initiation of any clinical trial other than a Phase I trial.

 

3.3                                  Product Team .  Upon Sunesis’ exercise of the Co-Funding Option, the Parties shall form a product team with respect to each Co-Funded Product that shall report to the JDC, comprised of Biogen Idec and Sunesis personnel that will implement the further development and regulatory affairs with respect to that Co-Funded Product (each a “Product Team”) in accordance with the Co-Development Plan and Budget.  It is understood that both Biogen Idec and Sunesis shall have the opportunity for meaningful participation in the activities of the Product Team commensurate with their respective levels of funding participation.  Sunesis shall be notified at least two weeks in advance of the date of each Product Team meeting and shall have the opportunity to have its representatives attend such meeting.  Biogen Idec shall provide such Sunesis representatives with all information distributed to Biogen Idec members of the Product Team, and such other material information as Sunesis may reasonably request from time to time.  The Parties expect that Sunesis will exercise its Co-Funding Option with respect to the first Product directed to the Raf/[*] Target.  Accordingly, upon designation of a Development Candidate in accordance with Section 2.6 above with respect to a Product directed at the Raf/[*] Target, the Parties shall establish a Product Team for such Product (i.e. even though the Product is not yet a Co-Funded Product).  In such event, the Parties shall maintain such Product Team under this Section 3.3 until the Co-Funding Option lapses with respect to such Product.  For clarity, it is understood that the establishment of a Product Team hereunder for such Product directed at the Raf/[*] Target shall not obligate Sunesis to subsequently exercise the Co-Funding Option with respect to such Product Team.

 

3.4                                  Regulatory Matters .  Biogen Idec shall file and be the owner of all regulatory filings for Target Selective Compounds and/or Products (including Co-Funded Products) developed

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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pursuant to this Agreement, including all NDAs and Regulatory Approvals, unless otherwise agreed by the Parties.

 

3.5                                  Product Reversion .  In the event that Biogen Idec fails to use Commercially Reasonable and Diligent Efforts to develop and commercialize a Co-Funded Product pursuant to Article 9 or in the event that Sunesis terminates this Agreement pursuant to Section 14.2 for Biogen Idec’s breach, pursuant to Section 14.3 for Biogen Idec’s bankruptcy or in the event that Biogen Idec terminates this Agreement pursuant to Section 14.4 for convenience, Sunesis shall have the right to assume the development and commercialization of such Co-Funded Product, subject to the terms and conditions of this Section 3.5, upon notice to Biogen Idec.  Upon effective date of such notice from Sunesis, such Co-Funded Product shall be designated a “Reverted Product”, the terms set forth in Section 1 of Exhibit 3.5 attached hereto shall thereafter apply, and Sunesis shall pay royalties to Biogen Idec as provided under 7.6.2 on Net Sales of such Reverted Product by Sunesis.

 

ARTICLE 4

 

PRODUCT COMMERCIALIZATION

 

4.1                                  Commercialization Rights .  Subject to the provisions of Section 4.2, Biogen Idec shall be responsible for the establishment and implementation of the strategy, plans and budgets for marketing and promotion of the Products.

 

4.2                                  Co-Promotion Option .  Sunesis will have an option (the “Co-Promotion Option”) to co-promote each Co-Funded Product in the Co-Funding Territory, according to the terms and conditions set forth in this Section 4.2.  This Co-Promotion Option may be exercised at Sunesis’ discretion on a Product-by-Product and country-by-country basis for any Co-Funded Product, by so notifying Biogen Idec in writing within ninety (90) days of the submission of the first NDA for such Co-Funded Product in such country (each such Co-Funded Product for which Sunesis exercises the Co-Promotion Option being referred to as a “Co-Promoted Product”).  Prior to filing the first NDA for a Co-Funded Product in a country, Biogen Idec shall provide to Sunesis with a good faith estimate of the number of field force personnel to be deployed for such Co-Funded Product in the applicable territory for the [*] period following the launch, on a [*] basis, together with a then-current Sales and Marketing Plan for such Co-Funded Product.  The estimate of the number of field force personnel to be deployed shall be prepared by the JCC, and shall take into consideration the then-current marketing and promotion practices in the relevant markets and the number and nature of other products, if any, including the detail position, if applicable, that such field force personnel will be selling.  In situations where field force personnel will be selling multiple products, the JCC shall make a good faith allocation of the field force personnel’s time to be spent on each product.  As used in this Section 4.2, “co-promote” or “co-promotion” shall mean to promote jointly or joint promotion of a Product through Biogen Idec’s and Sunesis’ respective sales forces under the same brand name, with Biogen Idec booking all sales of such Co-Promoted Product.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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4.2.1                         Scope and Coordination of Co-Promotion .  Upon exercise of its Co-Promotion Option with respect to a Co-Promoted Product, Sunesis shall have the right to field up to the Co-Funding Percentage (i.e. [*]%, [*]% or [*]%) (the “Election Percentage”) of the field force, as such field force is determined in good faith by the JCC, with respect to the Co-Promoted Product in the applicable territory.  The JCC shall be responsible for coordinating the co-promotion activities under this Section 4.2, and shall develop the strategies and programs to optimally carry out marketing and promotional activities, including but not limited to, the assignment of sales force responsibilities in accordance with the Sales and Marketing Plan.  It is understood that Sunesis may use one or more contract service organizations for its activities under this Section 4.2, provided that with respect to each Co-Promoted Product, Sunesis [*] contract service organization for such activities more than [*] ([*]) year after regulatory approval in the United States or the European Union (whichever is earlier) for such Co-Promoted Product. Sunesis field sales force representatives will be employed by Sunesis and Sunesis shall be responsible for all the payment of all such representatives’ salary, out-of pocket expenses (other than for promotional materials), bonus (Sunesis shall adopt substantially similar bonus plans/systems as Biogen Idec to reward sales) and benefits, pension, insurance, social security and any other related obligations.  Sunesis shall within thirty (30) days of the end of each calendar quarter send a written report to Biogen Idec setting out for each applicable territory and each Co-Promoted Product, the number of field sales force representatives performing co-promotion activities hereunder, and the number and nature of other products, if any, that such field force personnel promoted during such calendar quarter.  In the event that in any two [*] Sunesis fails to achieve at least [*] percent ([*]%) of the field force efforts in a particular country for a Co-Promoted Product that are allocated to Sunesis in the applicable Sales and Marketing Plan, Biogen Idec may terminate Sunesis’ right to co-promote such Co-Promoted Product in such country upon written notice to Sunesis.

 

4.2.2                         Co-Promotion Obligations .  Sunesis shall employ a professional and trained sales force to co-promote the Co-Promoted Product, and such sales force shall meet standards of competence and professionalism as are common in the pharmaceutical industry.  In all events, Sunesis’ co-promotion shall be conducted as directed by the JCC and in accordance with the then current Sales and Marketing Plan and in accordance with all applicable laws.  Biogen Idec shall provide to Sunesis sales personnel at Biogen Idec’s expense any Co-Promoted Product-specific training and promotional materials (including samples), and shall permit Sunesis sales personnel to attend and participate in any Co-Promoted Product-specific seminars and sales training programs at no charge to Sunesis, in each case as reasonably necessary to effectively promote the particular Co-Promoted Product consistent with the Sales and Marketing Plan.

 

4.2.3                         Reimbursement .  For the performance of the obligations of Sunesis under this Section 4.2, Biogen Idec shall reimburse Sunesis as described herein.  Within thirty (30) days of the end of each calendar quarter Sunesis shall invoice Biogen Idec based on direct costs incurred by Sunesis in performing sales promotional activities under this Section 4.2.  The cost for a Sunesis sales representative shall be based on a commercial FTE rate to be reasonably determined annually by the JCC (provided that in the event that a CSO is employed by Sunesis

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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as provided in Section 4.2.1, such number will not exceed one hundred ten percent (110%) of Biogen Idec’s direct cost for a sales representative (i.e. salary, bonus, benefits, travel and entertainment)).  In the event that Sunesis sales representatives promote any other products other than such Co-Promoted Product, then Biogen Idec shall only reimburse for the pro rata share of the cost of such Sunesis sales representatives.

 

4.2.4                         Right to Terminate Co-Promotion .  Sunesis shall have the right, on a territory by territory basis, to terminate its co-promotion of any Co-Promoted Product, and its obligations under this Section 4.2 with respect to such Co-Promoted Product, on a Co-Promoted Product-by-Co-Promoted Product basis, upon one hundred eighty (180) days prior notice to Biogen Idec.  Upon termination of co-promotion under this Section 4.2.4, Sunesis shall have no right to reimbursement by Biogen Idec under Section 4.2.3 for services provided after the effective date of such termination.

 

4.3                                  Amendment of Sales and Marketing Plan .  Promptly upon exercise of Sunesis’ Co-Promotion Option hereunder, the JCC shall meet to revise the Sales and Marketing Plan to reflect the sales activities to be undertaken by Sunesis, including without limitation the formulation of a mechanism to establish and adjust cost allocation, and the definition of a relevant field sales force promotional activity metric for purposes of allocating the activities of sales representatives.

 

4.4                                  Sunesis Logo .  The name and logo of Sunesis shall appear, with reasonable size and prominence, on all packaging, package inserts, (and to the extent permitted) labeling, marketing and sales materials and advertisements for all Co-Promoted Products in the applicable territory.

 

4.5                                  Sunesis Insurance .  In the event that Sunesis exercises its Co-Promotion Option, Sunesis shall procure and continue to maintain, at its own cost, the following insurance coverage: Commercial General Liability, including coverage for products and completed operations (maintained for a period of at least five (5) years after expiration or termination of this Agreement) and contractual liability (including coverage for advertising and personal injury). The JCC shall set commercially reasonable and appropriate minimum terms and conditions for such insurance coverage, consistent with then-current pharmaceutical industry practice for commercialization efforts of similar scope to the co-promotion activities undertaken hereunder.  Sunesis shall provide Biogen Idec with a certificate of insurance reflecting such coverage.

 

ARTICLE 5
MANAGEMENT

 

5.1                                  Joint Steering Committee .  Within thirty (30) days of the Effective Date, the Parties shall establish a joint steering committee (“Joint Steering Committee”) to provide oversight and management of the activities undertaken under this Agreement.  The Joint Steering Committee will be composed of two (2) representatives of each Party who shall be appointed (and may be replaced at any time) by such Party on prior written notice to the other Party in accordance with this Agreement.  At least one (1) representative of a Party on the Joint Steering Committee shall be a vice-president or more senior officer of such Party, and the representatives shall have

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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relevant experience and expertise in research, development and commercialization of biopharmaceuticals.

 

5.1.1                         Responsibilities .  The Joint Steering Committee shall be responsible for (i) reviewing the efforts of the JRC in the conduct of the Research Program, and resolving disputes as to matters to be decided by the JRC under this Agreement; (ii) reviewing the efforts of the JDC in the conduct of ongoing development activities and regulatory affairs with respect to Co-Funded Products under Article 3, and resolving disputes as to matters to be decided by the JDC under this Agreement; (iii) reviewing the efforts of the JCC in the conduct of promotional activities of the Parties with respect to Co-Promoted Products under Article 4, and resolving disputes as to matters to be decided by the JCC under this Agreement and (iv) taking such other actions as are specifically allocated to the Joint Steering Committee under this Agreement.

 

5.1.2                         Meetings . The Joint Steering Committee shall meet quarterly, or at such frequency as agreed by the respective committee members.  Meetings of the Joint Steering Committee shall be at such locations as the Parties agree, and will otherwise communicate regularly by telephone, electronic mail, facsimile and/or video conference.  With the consent of the Parties, other representatives of Sunesis or Biogen Idec may attend the Joint Steering Committee meetings as nonvoting observers.

 

5.1.3                         Decisions .  Any approval, determination or other action of the Joint Steering Committee shall require agreement of the members of the Joint Steering Committee, with each Party having one (1) vote.  Action that may be taken at a meeting of the Joint Steering Committee also may be taken without a meeting if a written consent setting forth the action so taken is signed by all members of the Joint Steering Committee.

 

5.1.4                         Disputes .  In the event the Joint Steering Committee is unable to reach consensus on a particular matter within its jurisdiction or that of the JRC, JDC or JCC (other than as explicitly set forth in Section 15.2 below), the matter shall be referred to executives of the Parties in accordance with Section 15.1, and if such referral does not resolve such matter, then Biogen Idec shall have the right to cast a deciding vote on the JSC. Notwithstanding the foregoing, Biogen Idec shall not have the right to exercise such deciding vote in a manner that is not consistent with the other terms and conditions of this Agreement or that imposes a material obligation on Sunesis.  In the evaluation of a Diligence Summary pursuant to Section 1.10, any decision of the JSC shall be binding on the Parties, but in the event the JSC is unable achieve agreement with respect to such evaluation, then such dispute shall be resolved as set forth in Section 1.10.

 

5.2                                  Joint Sub-Committees .  The Parties shall form the JRC, JDC and JCC (each, a “Joint Sub-Committee”) in accordance with the terms set forth in Sections 5.2, 5.3, 5.4 and 5.5.

 

5.2.1                         Generally .  Each Joint Sub-Committee shall meet at such locations as the Parties agree, and will otherwise communicate regularly by telephone, electronic mail, facsimile and/or video conference.  Each Party shall be responsible for all of its own expenses associated with attendance of such meetings, and either Party may replace its respective representatives to each Joint Sub-Committee at any time, with prior written notice to the other Party.  From time to time, each Joint Sub-Committee may establish further subcommittees to oversee particular

 

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projects or activities, and such further subcommittees will be constituted as such Joint Sub-Committee approves.

 

5.2.2                         Decision Making .  Decisions of each Joint Sub-Committee shall be made by unanimous approval of the team leaders from each Party present in person or by other means (e.g., teleconference) at any meeting; provided that at least one member from each Party must be so present and voting.  In the event that unanimity is not achieved within a Joint Sub-Committee on a decision required to be made by such Joint Sub-Committee, the matter will be referred to the Joint Steering Committee, which in each case shall promptly meet and endeavor in good faith to resolve such matter in a timely manner.  In the event the Joint Steering Committee is unable to reach consensus on a particular matter, such matter shall be resolved in accordance with Section 5.1.4 above.

 

5.3                                  Joint Research Committee .

 

5.3.1                         Formation .  Within thirty (30) days of the Effective Date, Biogen Idec and Sunesis will establish a Joint Research Committee (“JRC”) to oversee, review and recommend direction of the Research Program.  The JRC shall include three (3) representatives of each of Biogen Idec and Sunesis, with each Party’s members selected by that Party.  Unless otherwise agreed by the Parties, at least one (1) representative of each Party to the JRC must be at least a director or higher level employee of such Party.  During the Research Term, the JRC shall meet at least quarterly, or at a frequency as agreed by the respective committee members.  With the consent of the Parties, other representatives of Sunesis or Biogen Idec may attend meetings of the JRC as nonvoting observers.

 

5.3.2                         Responsibilities .  The responsibilities of the JRC shall consist of: (i) monitoring and reporting research progress and ensuring open and frequent exchange between the Parties regarding Research Program activities; (ii) designating the variant species of a protein to be included with a specific Target (iii) establishing or modifying Criteria for the selection of Hit Compounds, Lead Compounds; (iv) designating Target Selective Compounds as Hit Compounds and Lead Compounds, (v) modifying the Research Plan; and (vi) taking such other actions as may be specifically allocated to the JRC by the Parties (such as making decisions regarding research activities or allocation, but not the number, of FTEs under the Research Plan).

 

5.4                                  Joint Development Committee .

 

5.4.1                         Formation .  Promptly following notice from Sunesis that it is exercising its Co-Funding Option, the Parties shall establish a Joint Development Committee (“JDC”) with respect to the development of such Co-Funded Product(s).  The JDC will be composed of up to three (3) representatives of Biogen Idec (at Biogen Idec’s discretion) and at least one (1) representative of Sunesis who shall be appointed (and may be replaced at any time) by the respective Party on written notice to the other Party in accordance with this Agreement.  In the event that Sunesis undergoes a Change of Control (as that term is defined in Section 3.2.4(b) above), the JDC shall be dissolved in accordance with Section 3.2.3(e).

 

5.4.2                         Responsibilities .  The responsibilities of the JDC shall consist of (i) overseeing the ongoing development of Co-Funded Product(s), (ii) establishing Co-Development

 

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Plans and Budgets for Co-Funded Products, (iii) monitoring and approving development activities under such Co-Development Plans and Budgets, (iv)  reviewing and approving regulatory correspondence, final study reports and submissions to Regulatory Authorities relating to Co-Funded Products, and (v) making such decisions as are expressly provided in Article 3.

 

5.4.3                         Meetings and Information .  The JDC shall meet at least quarterly.  Biogen Idec shall notify Sunesis at least two weeks in advance of the date of each JDC meeting, and Sunesis shall have the opportunity to send the Sunesis representative to each such meeting.  Biogen Idec shall provide such Sunesis representative with schedules of all such meetings, as well as any other information distributed to Biogen Idec members of the JDC.

 

5.5                                  Joint Commercialization Committee .

 

5.5.1                         Formation.  Upon request by either Party following the initiation of the first Phase III clinical study for a Co-Funded Product, the Parties shall establish a Joint Commercialization Committee (“JCC”) with respect to commercialization of such Co-Funded Product(s).  The JCC will be composed of up to three (3) representatives of Biogen Idec (at Biogen Idec’s discretion) and at least one (1) representative of Sunesis who shall be appointed (and may be replaced at any time) by the respective Party on written notice to the other Party in accordance with this Agreement.

 

5.5.2                         Responsibilities .  The JCC shall have responsibility to monitor the conduct and progress of the commercialization strategy, plans, and budgets, including establishment of a plan and budget for the marketing, promotion, sale and distribution of such Co-Funded Product (each a “Sales and Marketing Plan”) and managing the promotional activities of the Parties with respect to Co-Promoted Products under Article 4 above.  JCC shall update the Sales and Marketing Plan periodically, and no less often than annually, and shall include therein detailed plans and budgets for the marketing, promotion, sale and distribution of each Co-Funded Product.

 

5.5.3                         Meetings and Information .  The JCC shall meet at least quarterly.  Biogen Idec shall notify Sunesis at least two weeks in advance of the date of each JCC meeting, and Sunesis shall have the opportunity to send at least one Sunesis representative to each such meeting, who shall be designated as a member of the JCC.  Biogen Idec shall provide such Sunesis representative with schedules of all such meetings, as well as any material information distributed to Biogen Idec members of the JCC.

 

ARTICLE 6
LICENSES

 

6.1                                  Research Licenses .

 

6.1.1                         Research Licenses to Biogen Idec .

 

(a)                                   Sunesis Collaboration Technology for Research Program .  Subject to the terms and conditions of this Agreement, Sunesis hereby grants to Biogen Idec a worldwide,

 

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non-exclusive license under the Sunesis Collaboration Technology and Sunesis’ interest in the Joint Collaboration Technology, with the right to grant sublicenses to the extent provided in Section 6.1.3, to conduct research pursuant to the Research Program (including but not limited to making, having made, and using Synthesized Compounds). Unless terminated earlier herein, except as set forth in Section 6.2.1, the license granted under this Section 6.1.1(a) shall expire at the end of the Research Term.

 

(b)                                  Sunesis Core Technology and Licensed Pre-Existing Technology .  Subject to the terms and conditions of this Agreement, Sunesis hereby grants to Biogen Idec a worldwide, non-exclusive license under the Sunesis Core Technology and Licensed Pre-Existing Technology, with the right to grant sublicenses solely with respect to Licensed Pre-Existing Technology and to the extent provided in Section 6.1.3, in each case to conduct research pursuant to the Research Program (including but not limited to making, having made, and using Synthesized Compounds).  The foregoing research license to Biogen Idec under the Sunesis Core Technology shall not include the right to sublicense the Sunesis Core Technology, or practice Sunesis Core Technology to discover novel compounds outside the Field, and shall only include the right to conduct activities in the Research Program.  Unless terminated earlier herein, except as set forth in Section 6.2.2, the license granted under this Section 6.1.1(b) shall expire at the end of the Research Term.

 

(c)                                   Sunesis Collaboration Technology for Collaboration Compounds .  Subject to the terms and conditions of this Agreement, Sunesis grants to Biogen Idec a worldwide, non-exclusive license under the Sunesis Collaboration Technology and Sunesis’ interest in the Joint Collaboration Technology, in each case with the right to grant sublicenses to the extent provided in Section 6.1.3, to make, discover, research and/or develop Collaboration Compounds, alone or as incorporated into Other Biogen Idec Products.

 

6.1.2                         Research Licenses to Sunesis .

 

(a)                                   Biogen Idec Collaboration Technology for Research Program .  Subject to the terms and conditions of this Agreement, Biogen Idec hereby grants to Sunesis a worldwide, non-exclusive license under the Biogen Idec Collaboration Technology and Biogen Idec’s interest in Joint Collaboration Technology, in each case with the right to grant sublicenses to the extent provided in Section 6.1.3, solely to conduct research pursuant to the Research Program (including but not limited to making, having made, and using Synthesized Compounds under the Research Program). Unless terminated earlier herein, the license granted under this Section 6.1.2(a) shall expire at the end of the Research Term.

 

(b)                                  Joint Collaboration Technology for Collaboration Compounds .  Subject to the terms and conditions of this Agreement, Biogen Idec grants to Sunesis a worldwide, non-exclusive license under Biogen Idec’s interest in the Joint Collaboration Technology, with the right to grant sublicenses to the extent provided in Section 6.1.3, to make, discover, research and/or develop Collaboration Compounds, alone or as incorporated into Sunesis Products.

 

6.1.3                         Sublicensing of Research Licenses .  Subject to the terms and conditions of this Agreement, either Party shall have the right to grant sublicenses (but not to authorize the

 

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grant of further sublicenses) of the rights granted under Sections 6.1.1 and 6.1.2 above except as otherwise set forth therein, provided that such sublicense is granted (i) to a contract research organization (CRO) where the sublicensing Party retains all commercialization rights to compounds produced by the CRO, or (ii) for the purposes of a bona fide research collaboration with a Third Party where the sublicensing Party remains substantially involved in the performance of the research with such Third Party collaborator.  It is understood and agreed that nothing in this Section 6.1.3 shall limit or modify the provisions of Section 2.4.

 

6.2                                  Commercialization Licenses .

 

6.2.1                         License under the Sunesis and Joint Collaboration Technology to Target Selective Compounds .  Subject to the terms and conditions of this Agreement (including Section 6.1.2 above), Sunesis hereby grants to Biogen Idec a worldwide, exclusive license under the Sunesis Collaboration Technology and Sunesis’ interest in the Joint Collaboration Technology, in each case with the right to grant and authorize sublicenses as provided in Section 6.5, to research, develop, make, have made, use, import, offer for sale, sell and otherwise exploit Target Selective Compounds for any purpose, without regard to the mechanism of action of such Target Selective Compound, alone or as incorporated into a Product.

 

6.2.2                         License under the Sunesis Core Technology to Target Selective Compounds .  Subject to the terms and conditions of this Agreement, Sunesis hereby grants to Biogen Idec a worldwide, non-exclusive license under the Sunesis Core Technology to make, have made, use, import, offer for sale and sell Target Selective Compounds for any purpose, without regard to the mechanism of action of such Target Selective Compound, alone or as incorporated into a Product.  It is understood that the foregoing license to Sunesis Core Technology shall not include the right to practice Sunesis Core Technology to discover novel compositions.

 

6.2.3                         License under the Licensed Pre-Existing Technology to Licensed Pre-Existing Compounds .  Subject to the terms and conditions of this Agreement, Sunesis hereby grants to Biogen Idec a worldwide, exclusive license under the Licensed Pre-Existing Technology, with the right to grant and authorize sublicenses as provided in Section 6.5, to research, develop, make, have made, use, import, offer for sale, sell and otherwise exploit Licensed Pre-Existing Compounds for any purpose, without regard to the mechanism of action of such Licensed Pre-Existing Compound, alone or as incorporated into a Product.

 

6.2.4                         Reverted Products .  Subject to the terms and conditions of this Agreement (including Section 6.1.1 above), with respect to each Terminated Compound Biogen Idec hereby grants to Sunesis a worldwide, exclusive license under Biogen Idec’s interest in the Biogen Idec Collaboration Technology, Joint Collaboration Technology and other intellectual property rights in existence and owned or controlled by Biogen Idec as of the date such Collaboration Compound becomes a Terminated Compound (“Other Biogen Idec Technology”), with the right to grant and authorize sublicenses as provided in Section 6.5, to research, develop, make, have made, use, import, offer for sale, sell and otherwise exploit such Terminated Compound, alone or as incorporated into a Reverted Product.  It is understood and acknowledged that the licenses granted with respect to Biogen Idec Collaboration Technology and Other Biogen Idec Technology in this Section 6.2.4 extend solely to that technology that is being used on that

 

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Terminated Compound (or a Reverted Product incorporating such Terminated Compound) as of the date of such reversion to Sunesis, and solely to the extent necessary for Sunesis to continue development and commercialization of such Terminated Compound (or a Reverted Product incorporating such Terminated Compound) in the form in which such Terminated Compound or Reverted Product exist as of the date of such reversion to Sunesis.

 

6.3                                  Other Compounds .

 

6.3.1                         License to Biogen Idec for Other Biogen Idec Products .

 

(a)                                   Subject to the terms and conditions of this Agreement, Sunesis hereby grants to Biogen Idec a worldwide, non-exclusive license under the Sunesis Collaboration Technology and Sunesis’ interest in the Joint Collaboration Technology, in each case with the right to grant and authorize sublicenses as provided in Section 6.5, to research, develop, make, have made, use, import, offer for sale, sell and otherwise exploit Other Compounds for any purpose, alone or as incorporated in Other Biogen Idec Products.  Notwithstanding the foregoing, the non-exclusive license granted in this Section 6.3.1(a) shall at all times exclude Other Compounds that are Target Selective against Sunesis Targets, subject to Sections 6.3.1(b) and 6.4.

 

(b)                                  Subject to the terms and conditions of this Agreement (including Section 6.1.2 above), Sunesis hereby grants to Biogen Idec a worldwide, exclusive license under the Sunesis Collaboration Technology and Sunesis’ interest in the Joint Collaboration Technology, in each case with the right to grant and authorize sublicenses as provided in Section 6.5, to research, develop, make, have made, use, import, offer for sale, sell and otherwise exploit Other Compounds that are Target Selective against Other Biogen Idec Targets for any purpose, alone or as incorporated in Other Biogen Idec Products.

 

6.3.2                         License to Sunesis for Sunesis Products .

 

(a)                                   Subject to the terms and conditions of this Agreement, Biogen Idec hereby grants to Sunesis a worldwide, non-exclusive license under Biogen Idec’s interest in the Joint Collaboration Technology, in each case with the right to grant and authorize sublicenses as provided in Section 6.5, to research, develop, make, have made, use, import, offer for sale, sell and otherwise exploit Other Compounds for any purpose, alone or as incorporated in Sunesis Products.  Notwithstanding the foregoing, the non-exclusive license granted in this Section 6.3.2(a) shall at all times exclude Other Compounds that are Target Selective against Other Biogen Idec Targets, subject to Sections 6.3.2(b) and 6.4.

 

(b)                                  Subject to the terms and conditions of this Agreement (including Section 6.1.1 above), Biogen Idec hereby grants to Sunesis a worldwide, exclusive license under Biogen Idec’s interest in the Joint Collaboration Technology, in each case with the right to grant and authorize sublicenses as provided in Section 6.5, to research, develop, make, have made, use, import, offer for sale, sell and otherwise exploit Other Compounds that are Target Selective against Sunesis Targets for any purpose, alone or as incorporated in Sunesis Products.

 

(c)                                   For the avoidance of doubt, it is understood and acknowledged that the licenses set forth in this Section 6.3.2 shall not extend to Biogen Idec Derivatives.

 

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6.4                                  Precedence of Exclusive Licenses .  The Parties agree that each of the exclusive commercialization licenses under Collaboration Technology set forth in Sections 6.2.1, 6.3.1(b) and 6.3.2(b) with respect to Collaboration Compounds that are Target Selective against a particular Target are granted and taken subject to any of such licenses previously granted hereunder with respect to Collaboration Compounds that are Target Selective against a different Target.  For the purposes of determining whether such licenses are “previously granted” as used in this Section 6.4, the exclusive licenses set forth in Sections 6.2.1, 6.3.1(b) and 6.3.2(b) shall be considered separate licenses for each Collaboration Target, Other Biogen Idec Target and Sunesis Target, respectively, and each separate Target-specific license shall be deemed granted as of the date of designation of such Target as a Collaboration Target, Other Biogen Idec Target or Sunesis Target, as applicable.

 

6.5                                  Commercialization Sublicenses .  Within a reasonable period of time following grant of any such sublicense, to the extent sublicensing is permitted under Section 6.2 or 6.3 above, the sublicensing Party shall provide the other Party with a summary of such sublicense, including the identity of the Sublicensee (including any Affiliate) and the rights granted with respect thereto for each product and territory, sufficient to allow such other Party to verify any amounts then or subsequently due under Articles 7 and 8 below; provided that such summary may redact confidential information that the sublicensing Party is reasonably prohibited from disclosing under the sublicense agreement.  Any sublicense granted under this Section 6.5 shall be consistent with all of the terms and conditions of this Agreement, and subordinate thereto, and the sublicensing Party shall remain responsible to the other Party for the compliance of each such Sublicensee with the obligations due under this Agreement.

 

6.6                                  Sunesis Covenant with Respect to Compounds in the Field .  During the [*], Sunesis represents, warrants and agrees that it will not market, sell or promote, alone or in collaboration with others, any pharmaceutical compound that is [*] against a [*] other than as permitted under Article 4 and Sections 2.7 or 3.5 above, or under an exclusive license that is granted to Sunesis pursuant to Section 6.3.2(b) and given precedence pursuant to Section 6.4 over any exclusive licenses granted to Biogen Idec with respect to such pharmaceutical compound under Section 6.2.1 and 6.3.1(b).  Notwithstanding the foregoing, after the end of the [*], the covenant set forth in this Section 6.6 shall terminate with respect to any [*] that is [*] against a [*] with respect to which Biogen Idec is not using Commercially Reasonable and Diligent Efforts, unless such pharmaceutical compound is also [*] against another [*] with respect to which Biogen Idec has maintained Commercially Reasonable and Diligent Efforts after the [*].  Biogen Idec shall provide Sunesis with a [*] with respect to each [*] upon the [*] and upon [*] thereof for [*] the covenant set forth in this Section 6.6 [*] with respect to such [*].

 

6.7                                  No Other Rights; No Implied Licenses .  Only the licenses granted or retained pursuant to the express terms of this Agreement shall be of any legal force or effect.  No other license rights shall be created by implication, estoppel or otherwise.

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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ARTICLE 7
PAYMENTS

 

7.1                                  Research Program Funding .

 

7.1.1                         Quarterly Sunesis FTE Payments .  Unless otherwise agreed by the Parties, the Research Plan shall at all times provide for between [*] ([*]) and [*] ([*]) Sunesis FTEs.  Biogen Idec agrees to pay Sunesis research funding for Sunesis’ conduct of the Research Program quarterly, as described below.  Unless agreed otherwise by the JRC, Biogen Idec shall pay Sunesis for [*] ([*]) FTEs multiplied by the FTE Rate in advance quarterly installments, no later than thirty (30) days after the start of each calendar quarter.

 

7.1.2                         Quarterly Reconciliation .  Within thirty (30) days after the end of each calendar quarter, Sunesis shall provide to Biogen Idec a statement reflecting the total number of FTEs worked during the previous calendar quarter, multiplied by the FTE Rate (the “Actual Amount”).   In the event that the amount of quarterly FTE payments made by Biogen Idec under 7.1.1 with respect to the previous calendar quarter is less than the Actual Amount, Biogen Idec shall add such underpayment to the next quarterly payment by Biogen Idec due under 7.1.1.  In the event that the amount of quarterly FTE payments made by Biogen Idec under 7.1.1 with respect to the previous calendar quarter exceeds the Actual Amount, Biogen Idec shall be entitled to credit such overpayment against any payments by Biogen Idec due under 7.1.1 with respect to subsequent calendar quarters.  Sunesis shall provide Biogen Idec with a final reconciliation of any underpayments or overpayments within the earlier of thirty (30) days of: (i) termination of the Research Term, including any extensions thereof, and (ii) termination of this Agreement.  Any Party owing the other Party money pursuant to the final reconciliation shall pay the other Party within thirty (30) days of the final reconciliation.

 

7.1.3                         Research Term Extension .  Unless otherwise agreed to by the Parties, during any extension of the Research Term beyond the initial four (4) year Research Term, the Research Plan shall provide for between [*] ([*]) and [*] ([*]) Sunesis FTEs, to be paid in accordance with Sections 7.1.1 and 7.1.2.  It is understood and agreed, that in no event is Biogen Idec obligated to extend the Research Term.

 

7.1.4                         Outsourced Activities .  In the event the Research Plan provides, or the JRC agrees, work under the Research Program may be conducted by a Third Party.  Unless otherwise agreed by the Parties, Biogen Idec shall bear the out-of-pocket costs incurred with respect to such work.

 

7.2                                  Technology Access Fee; Equity Investment

 

7.2.1                         Technology Access Fee .

 

(a)                                   Upon signing of this Agreement, an upfront technology access fee of Seven Million U.S. Dollars ($7,000,000) shall be due to Sunesis, payable by Biogen Idec within

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

37



 

ten (10) days after the Effective Date.  Such fee shall be non-refundable and non-creditable against other amounts due Sunesis hereunder.

 

(b)                                  In the event that Biogen Idec desires to exercise its option to extend the  initial four (4) year Research Term for one (1) additional year pursuant to Section 2.3, Biogen Idec shall pay to Sunesis, at least thirty (30) days before the end of the initial four (4) year Research Term, an additional technology access fee of $[*].  In the event that Biogen Idec subsequently desires to exercise its option to further extend the Research Term pursuant to Section 2.3 (i.e. for a second year), Biogen Idec shall again pay to Sunesis an additional technology access fee of $[*] at least thirty (30) days before the end of the then-current extension of the Research Term.

 

7.2.2                         Equity Investment in Sunesis .  Biogen Idec agrees to make an equity investment in Sunesis in the amount of Fourteen Million U.S. Dollars ($14,000,000) pursuant to a Stock Purchase Agreement substantially of the form set forth in Exhibit 7.2.2 attached hereto.  Biogen Idec shall purchase Sunesis Series C-2 preferred stock (“Series C-2”) at the price of Sunesis’ most recent general round of private financing, and such preferred stock will have the voting rights, registration rights, restricted information access and other terms consistent with the Series C-2, all as set forth in such Stock Purchase Agreement.  The Parties agree to execute such Stock Purchase Agreement within ten (10) days after the Effective Date.  Sunesis agrees that if Biogen Idec is required (as reasonably determined by an independent auditor) to include any financial data of Sunesis in Biogen Idec’s financial disclosures, whether due to the equity investment contemplated by this Section 7.2.2 or otherwise, Sunesis shall cooperate with Biogen Idec to provide any such required data upon reasonable request by Biogen Idec.  In addition, from time to time during the term of this Agreement and upon reasonable request by Biogen Idec, Sunesis shall provide Biogen Idec with summary financial or operational data reasonably necessary for an independent auditor to determine whether Biogen Idec is required to include any financial data of Sunesis in Biogen Idec’s financial disclosures.

 

7.3                                  Research Milestones .  On a Target-by-Target basis, Biogen Idec shall pay to Sunesis the following amounts within thirty (30) days following the first achievement of the following research milestones with respect to each Collaboration Target:

 

Research Milestones

 

Payment Amount

1.

The earlier of (i) designation of the first Hit Compound for such Collaboration Target by the JRC, or (ii) identification of the first Collaboration Compound to meet Hit Compound Criteria for such Collaboration Target:

 

$

[*]

 

 

 

 

2.

Approval by Biogen Idec, in accordance with Section 2.6, of the first Development Candidate for such Collaboration Target:

 

$

[*]

 

 

 

 

3.

Approval by Biogen Idec, in accordance with Section 2.6, of the second Development Candidate for such Collaboration Target:

 

$

[*]

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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Research Milestones

 

Payment Amount

Collaboration Target:

 

 

 

7.4                                  Development Milestones .

 

7.4.1                         Development Milestone Payments .  With respect to each (i) Collaboration Target, and (ii) Kinase to which an Other Biogen Idec Product is directed (a “Milestone Target”), Biogen Idec shall pay to Sunesis on a Target-by-Target basis the following amounts within thirty (30) days following the first achievement by Biogen Idec, its Affiliates or Sublicensees, as the case may be, of each of the following milestones with respect to (i) a Collaboration Compound that is Target Selective against such Milestone Target, or (ii) a Product or Other Biogen Idec Product (excluding for purposes hereof any Non-Kinase Other Biogen Idec Product) incorporating such Collaboration Compound (a “Milestone Compound”):

 

 

 

Payment Amount

Development Milestones

 


1 st  Indication

 


2 nd  Indication

1.

Initiation of the first Phase I trial for such Milestone Compound in any country:

 

$

[*]

 

[*]

 

 

 

 

 

 

2.

Initiation of the first Phase II trial for such Milestone Compound in any country:

 

[*]

 

$

[*]

 

 

 

 

 

 

3.

Initiation of the first Phase III trial for such Milestone Compound in any country:

 

$

[*]

 

$

[*]

 

 

 

 

 

 

4.

Filing of a NDA in the U.S. for such Milestone Compound:

 

$

[*]

 

$

[*]

 

 

 

 

 

 

5.

Filing of an NDA with EMEA for such Milestone Compound:

 

$

[*]

 

$

[*]

 

 

 

 

 

 

6.

Filing of a NDA in Japan for such Milestone Compound:

 

$

[*]

 

$

[*]

 

 

 

 

 

 

7.

Regulatory Approval in the U.S. of such Milestone Compound:

 

$

[*]

 

$

[*]

 

 

 

 

 

 

8.

Regulatory Approval by EMEA of such Milestone Compound:

 

$

[*]

 

$

[*]

 

 

 

 

 

 

9.

Regulatory Approval in Japan of such Milestone Compound:

 

$

[*]

 

$

[*]

 

Such milestone payments shall be non-refundable and non-creditable against other amounts due Sunesis hereunder.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

39



 

7.4.2                         Certain Additional Terms .

 

(a)                                   Target-by-Target Milestones .  It is understood that, subject to Section 7.4.2(b), the payments under this Section 7.4 shall be due only once with respect to each Milestone Target.

 

(b)                                  Multiple Indications .  With respect to a particular Milestone Target, if any Milestone Compound specifically directed at such Milestone Target is developed for a second Indication in a separate disease, it is understood that the payments for Development Milestones 2 through 9 will become due and payable at the time such Milestone Compound achieves such Development Milestone for such second Indication; provided, that the amounts due above for such second Indication will be the lower amounts reflected for such Indications in the right most column of the table under Section 7.4.1 above.  As used herein “Indication” shall mean a disease or condition for which approval for use of a Milestone Compound can be sought from the FDA or a regulatory authority or agency of a country other than the United States with responsibilities comparable to those of the FDA.  Notwithstanding the foregoing, varying forms or degrees of severity of the same disease shall be considered the same Indication, even if they require separate approvals from the FDA or other regulatory authority or agency.  For the avoidance of doubt, in the field of cancer, different tumor tissue types shall be considered different Indications.  Notwithstanding anything else in this Section 7.4, in the event that both the first and second Indication for which Development Milestone 2 was achieved with respect to a particular Milestone Target (or deemed to be achieved pursuant to 7.4.2(d)) are cancer Indications, Biogen Idec shall not be required to pay to Sunesis Development Milestone 2 for the second Indication with respect to such Milestone Target as set forth in Section 7.4.1, provided that Biogen Idec shall thereafter pay Development Milestones 3 through 9 upon achievement of the relevant Development Milestone with respect to such Indication and such Milestone Target.

 

(c)                                   Discontinued Compounds .  If Biogen Idec ceases all clinical development of a particular Milestone Compound that is specifically directed at a particular Milestone Target, after having made one or more of the payments due under Section 7.4.1 above on the achievement of a particular milestone by such Milestone Compound, there shall be no payment due upon the accomplishment of that same milestone with respect to the next Milestone Compound that is specifically directed at the same Milestone Target to achieve such milestone.

 

(d)                                  Accrued Milestones .  If a research milestone for a Milestone Target under Section 7.3 above is achieved with respect to such Milestone Target, or a development milestone for a Milestone Compound under Section 7.4.1 above is achieved with respect to such Milestone Compound, in each case before a prior research milestone under Section 7.3 or a prior development milestone under Section 7.4.1 for such Milestone Target or Milestone Compound, respectively, then the earlier milestone payments shall then also be due with respect to such Milestone Target or Milestone Compound, as the case may be.

 

7.4.3                         Reports; Payments .  Within ten (10) business days of the occurrence of any event which would trigger a milestone payment according to Section 7.3 or 7.4, Biogen Idec shall inform Sunesis of such occurrence.  The corresponding payment shall be due thirty (30) days after the occurrence of such event.

 

40



 

7.5                                  Royalties on annual Net Sales of Products .

 

7.5.1                         Products Generally .  Subject to Section 7.5.2 and 7.5.3, Biogen Idec shall pay to Sunesis a royalty on Net Sales by Biogen Idec, its Affiliates and their Sublicensees of Products (other than Net Sales of Co-Funded Products in the Co-Funded Territory) and Other Biogen Idec Products (excluding for purposes hereof Net Sales of any Non-Kinase Other Biogen Idec Product), (“Royalty Products”), on a Royalty Product-by-Royalty Product basis, equal to the percentage of such Net Sales set forth below:

 

 

Annual Net Sales

 

Royalty on Net Sales

Portion of Annual Net Sales of such Royalty Product up to $[*]:

 

[*]%

 

 

 

Portion of Annual Net Sales of such Royalty Product between $[*] and $[*]:

 

[*]%

 

 

 

Portion of Annual Net Sales of such Royalty Product between $[*] and $[*]:

 

[*]%

 

 

 

Portion of Annual Net Sales of such Royalty Product over $[*]:

 

[*]%

 

For purposes of the foregoing and Section 7.5.2 below, “annual Net Sales” shall mean, for a particular Product, the worldwide Net Sales of such Product for the particular calendar year.  In the event that in a calendar quarter portions of the worldwide Net Sales of a particular Product are subject to royalty obligations under both Sections 7.5.1 and 7.5.2, the applicable royalty rate under Section 7.5.2 shall be applied to worldwide Net Sales based on the proportion of worldwide Net Sales generated in the Co-Funded Territory.

 

7.5.2                         Co-Funded Products .

 

(a)                                   Subject to Section 7.5.2(b) and 7.5.2(c) and 7.5.3, Biogen Idec shall pay to Sunesis a royalty on annual Net Sales by Biogen Idec, its Affiliates and their Sublicensees of Co-Funded Products in the Co-Funded Territory, on a Co-Funded Product-by-Co-Funded Product basis, equal to the percentage of such Net Sales set forth below:

 

Annual Net Sales

 

Royalty on Net Sales

Portion of Annual Net Sales of such Co-Funded Product up to $[*]:

 

[*]%

 

 

 

Portion of Annual Net Sales of such Co-Funded Product between $[*] and $[*]:

 

[*]%

 

 

 

Portion of Annual Net Sales of such Co-Funded Product between $[*] and $[*]:

 

[*]%

 

 

 

Portion of Annual Net Sales of such Co-Funded Product over $[*]:

 

[*]%

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

41



 

(b)                                  Upon termination by Sunesis under Section 3.2.3(c) of its obligation to fund post Phase I Development Costs for any particular Co-Funded Product, Biogen Idec shall pay the royalty rate under Section 7.5.1 with respect to Net Sales of the terminated Co-Funded Product, except as set forth in this Section 7.5.2(b).  In the event that Sunesis’ termination of its co-funding obligations with respect to a particular Co-Funded Product followed a material change in the Co-Development Plan and Budget for such Co-Funded Product or activities thereunder (as defined in this Section 7.5.2(b)) from the Initial Development Plan, then notwithstanding the foregoing, Biogen Idec shall pay the royalty rate under Section 7.5.2(a) above with respect to Net Sales of the terminated Co-Funded Product until such time as (i) the amount by which (A) the cumulative royalties paid under this Section 7.5.2 for such Co-Funded Product after the date of Sunesis’ termination of its co-funding obligations with respect to such Co-Funded Product exceeds (B) the cumulative royalties for Net Sales of such Co-Funded Product that would have otherwise been payable during such period under Section 7.5.1, equals (ii) the amount paid by Sunesis to Biogen Idec for post Phase I Development Costs for such Co-Funded Product prior to the effective date of the termination.  Thereafter, Biogen Idec shall pay royalties on Net Sales of such Co-Funded Product according to Section 7.5.1.  For the purposes of the foregoing, a “material change in the Co-Development Plan and Budget for such Co-Funded Product or activities thereunder” shall mean: a material change in the indication for which Regulatory Approval will be sought, which results in a material change in the number or size of the trials for such Regulatory Approval, which results in an increase of fifty percent (50%) or more in the post Phase I Development Costs budgeted in the then-current Co-Development Plan and Budget for a particular calendar year, relative to those post Phase I Development Costs set forth in the Initial Development Plan for that calendar year.

 

(c)                                   Upon a [*] by Sunesis under Section 3.2.3(d) of its Co-Funding Percentage with respect to any particular Co-Funded Product, Biogen Idec shall pay a  royalty rate equal to the royalty rate under Section 7.5.2(a) [*] the applicable royalty [*] set forth below with respect to Net Sales of the [*] Co-Funded Product [*] of royalties otherwise specified in this Section 7.5.2.

 

[*] Co-Funding Percentage

 

Royalty [*] From Section 7.5.2(a)

[*]%

 

[*]%

[*]%

 

[*]%

 

For example, in the event that Sunesis [*] its Co-Funding Percentage from [*] percent ([*]%) to [*] percent ([*]%), then the [*] royalty rates set forth in Section 7.5.2(a) above (i.e. [*]%, [*]%, [*]% and [*]% for their respective ranges of Annual Net Sales) would each be [*] by [*]% (i.e. to [*]%, [*]%, [*]% and [*]%, respectively).

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

42



 

7.5.3                         Third Party Patents .

 

(a)                                   If: (i) a Valid Claim of a Third Party should be in force in any country during the Term of this Agreement covering the practice of the Sunesis Core Technology, Licensed Pre-Existing Technology, Sunesis Collaboration Technology or Joint Collaboration Technology as licensed to Biogen Idec under Section 6.2.1 or Section 6.3.1 with respect to the manufacture, use or sale of any Collaboration Compound, (ii) it should prove in Biogen Idec’s reasonable judgment, after consultation with Sunesis, impractical or impossible for Biogen Idec to commercialize such Collaboration Compound without obtaining a royalty bearing license from such Third Party under such Valid Claim in said country (with such agreement not to be unreasonably withheld or delayed), and (iii) the royalty paid to such Third Party is directed to the practice of rights granted to Biogen Idec under Section 6.2.1 or Section 6.3.1 with respect to such Collaboration Compound, then Biogen Idec shall be entitled to a credit against the royalty payments due under Section 7.5 with respect to the same Collaboration Compound in such country of an amount equal to [*] percent ([*]%) of the royalty paid to such Third Party for such Collaboration Compound in such country, arising from the practice of such Sunesis Core Technology, Licensed Pre-Existing Technology, Sunesis Collaboration Technology or Joint Collaboration Technology with respect to the manufacture, use or sale of the Collaboration Compound in said country, with such credit not to exceed [*] percent ([*]%) of the royalty otherwise due under this Agreement for such Collaboration Compound in such country.

 

(b)                                  If: (i) a Valid Claim of a Third Party should be in force in any country during the Term of this Agreement covering the practice of (A) the Joint Collaboration Technology as licensed to Sunesis under Section 6.3.2, or (B) the Biogen Idec Collaboration Technology, Joint Collaboration Technology or other intellectual property rights in existence and owned or controlled by Biogen Idec licensed to Sunesis under Section 6.2.4, in each case with respect to the manufacture, use or sale of any Collaboration Compound, (ii) it should prove in Sunesis’ reasonable judgment, after consultation with Biogen Idec, impractical or impossible for Sunesis to commercialize such Collaboration Compound without obtaining a royalty bearing license from such Third Party under such Valid Claim in said country (with such agreement not to be unreasonably withheld or delayed), and (iii) the royalty paid to such Third Party is directed to the practice of rights granted to Sunesis under Section 6.2.4 or Section 6.3.2 with respect to such Collaboration Compound, then Sunesis shall be entitled to a credit against the royalty payments due under Section 7.5 or 7.6 with respect to the same Collaboration Compound in such country of an amount equal to [*] percent ([*]%) of the royalty paid to such Third Party for such Collaboration Compound in such country, arising from the practice of the intellectual property described in (A) or (B) above with respect to the manufacture, use or sale of the Collaboration Compound in said country, with such credit not to exceed [*] percent ([*]%) of the royalty otherwise due under this Agreement for such Collaboration Compound in such country.

 

7.6                                  Royalties on Net Sales of Sunesis Products and Non-Kinase Other Biogen Idec Products .

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

43



 

7.6.1                         Other Biogen Idec Products .  Biogen Idec shall pay to Sunesis a royalty equal to [*] percent ([*]%) of Net Sales by Biogen Idec, its Affiliates and their Sublicensees of Non-Kinase Other Biogen Idec Products, provided that this Section 7.6.1 shall not apply to Net Sales of Kinase Other Biogen Idec Products, which Net Sales shall be governed by Section 7.5.1 above.

 

7.6.2                         Sunesis Products .

 

(a)                                   Sunesis shall pay Biogen Idec at a royalty rate equal to the royalty rate provided under Section 7.5.1with respect to Net Sales of Reverted Products by Sunesis, its Affiliates and their Sublicensees.

 

(b)                                  Subject to Section 7.6.2(a) above, Sunesis shall pay to Biogen Idec a royalty equal to [*] percent ([*]%) of Net Sales of Sunesis Products by Sunesis, its Affiliates and their Sublicensees.

 

7.7                                  Royalty Term .  The royalties due pursuant to Section 7.5 and Section 7.6 above shall be payable on a country-by-country and product-by-product basis commencing on the first commercial sale in a country and continuing until the later of: (i) the expiration of the last Valid Claim of the Sunesis Core Technology, the Licensed Pre-Existing Patents or the Joint Collaboration Patents covering the sale or use of such Product, Sunesis Product, or Other Biogen Idec Product, as applicable, in such country, or (ii) the tenth (10 th ) anniversary of the first commercial sale of such product in such country.

 

ARTICLE 8
PAYMENTS, BOOKS AND RECORDS

 

8.1                                  Royalty Reports and Payments .  After the first sale of a product on which royalties are payable by a Party hereunder, such Party shall make quarterly written reports to the other Party within sixty (60) days after the end of each calendar quarter, stating in each such report, separately the number, description, and aggregate Net Sales, by territory, of each such Product,  Other Biogen Idec Product or Sunesis Product sold during the calendar quarter upon which a royalty is payable under Section 7.5 or Section 7.6 above, as applicable.  Concurrently with the making of such reports, such Party shall pay to the other Party royalties due at the rates specified in Section 7.5 or Section 7.6 above, as applicable.

 

8.2                                  Payment Method .  All payments due under this Agreement shall be made by bank wire transfer in immediately available funds to a bank account designated by the Party owed such payment.  All payments hereunder shall be made in U.S. dollars.  Any payments that are not paid on the date such payments are due under this Agreement shall bear interest to the extent permitted by applicable law at a rate equal to the 3-month LIBOR rate at the close of business on the date such payment is due, plus an additional two percent (2%), calculated on the number of days such payment is delinquent.

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

44



 

8.3                                  Place of Royalty Payment; Currency Conversion .  The functional currency for accounting will be U.S. dollars.  Except as the Parties otherwise mutually agree, for billing and reporting, Development Costs and Net Sales will be translated, if necessary, into U.S. dollars using the currency exchange rates quoted by Bloomberg Professional, a service of Bloomberg L.P., or in the event Bloomberg Professional is not available, then the Eastern U.S. edition of The Wall Street Journal on the last business day of the applicable calendar quarter.

 

8.4                                  Records; Inspection .  Each Party shall keep, and shall ensure that its Affiliates keep, complete, true and accurate books of account and records for the purpose of determining the amounts payable under this Agreement.  Such books and records shall be kept at the principal place of business of such Party, for at least three (3) years following the end of the calendar quarter to which they pertain.  Such records will be open for inspection by a public accounting firm to whom the audited Party has no reasonable objection and subject to such accounting firm entering into a satisfactory confidentiality agreement, solely for the purpose of determining the payments to the other Party hereunder.  Such inspections may be made no more than twice each calendar year, at reasonable times and on reasonable notice.  Inspections conducted under this Section 8.4 shall be at the expense of the auditing Party, unless a variation or error producing an increase exceeding [*] percent ([*]%) of the amount stated for the period covered by the inspection is established in the course of any such inspection, whereupon all reasonable costs relating to the inspection for such period and any unpaid or overpaid amounts that are discovered will be promptly paid or refunded by the appropriate Party, in each case together with interest noted in Section 8.2 thereon from the date such payments were due (if underpaid) or paid (if overpaid) .

 

8.5                                  Withholding Taxes .  Each Party shall pay any and all taxes levied on account of amounts payable to it under this Agreement.  If laws or regulations require that taxes be withheld, the paying Party will (i) deduct those taxes from the remittable payment, (ii) timely pay the taxes to the proper authority, and (iii) send proof of payment to the other Party within sixty (60) days following that payment.

 

ARTICLE 9
DILIGENCE

 

9.1                                  Diligence; Reports .  Biogen Idec shall use Commercially Reasonable and Diligent Efforts to develop and commercialize Co-Funded Products within the Field.  Biogen Idec agrees to keep Sunesis fully informed regarding all Co-Funded Development Plans and the research, development and commercialization activities with respect to each Co-Funded Product, including by providing Sunesis with reports at least quarterly regarding ongoing activities being undertaken with respect to Co-Funded Products.  This Section 9.1 shall not limit other provisions of this Agreement that address the provision of information regarding Products.

 

9.2                                  Reversion of a Co-Funded Product . If Biogen Idec fails to use Commercially Reasonable and Diligent Efforts to develop and commercialize a Co-Funded Product, and Biogen Idec shall continue to fail to use Commercially Reasonable and Diligent Efforts to

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

45



 

develop and commercialize such Co-Funded Product for sixty (60) days after written notice thereof from Sunesis, then such Co-Funded Product shall become a Reverted Product.

 

9.3                                  Diligence for a Reverted Product .  Sunesis shall use Commercially Reasonable and Diligent Efforts to develop and commercialize each Reverted Product.  Sunesis agrees to keep Biogen Idec fully informed regarding the development and commercialization activities with respect to each Reverted Product, including by providing Biogen Idec with reports at least quarterly regarding ongoing activities being undertaken with respect to Reverted Products.

 

9.4                                  Termination of a Reverted Product .  If Sunesis fails to use Commercially Reasonable and Diligent Efforts to develop and commercialize a Reverted Product, and Sunesis shall continue to fail to use Commercially Reasonable and Diligent Efforts to develop and commercialize such Reverted Product for sixty (60) days after written notice thereof from Biogen Idec, then such Reverted Product shall cease to be a Reverted Product, and the licenses granted to Sunesis under Section 6.2.4 shall terminate with respect to Terminated Compounds incorporated in such Reverted Product.  Thereafter, such Terminated Compounds shall be Target Selective Compounds and subject to Biogen Idec’s licenses under Section 6.2 and obligations to pay royalties and milestones to Sunesis pursuant to Article 7.  In addition, the terms set forth in Section 2 of Exhibit 3.5 shall apply to such Reverted Product.

 

ARTICLE 10
INTELLECTUAL PROPERTY

 

10.1                            Ownership; Disclosure .

 

10.1.1                   Collaboration Technology .

 

(a)                                   Raf/[*] Technology .  All right, title and interest in and to Joint Collaboration Patents consisting of or directed to the Raf/[*] Target (the “Raf/[*] Patents”) shall, as between the Parties, be solely owned by Sunesis.  Biogen Idec shall assign and hereby assigns to Sunesis all right, title and interest in and to the Raf/[*] Patents, subject to the licenses granted to Biogen Idec under Article 6.

 

(b)                                  Ownership of Compounds .  All Synthesized Compounds and Collaboration Derivatives that are included in Joint Collaboration Know-How shall be jointly owned by the Parties, subject to the licenses granted under Article 6.  However, ownership of any patents, patent applications and other intellectual property rights with respect to such compounds and other inventions made in the course of the Research Program shall be as otherwise set forth in this Section 10.1.

 

(c)                                   Sunesis Collaboration Technology .  All right, title, and interest in and to the Sunesis Collaboration Technology shall be owned by Sunesis, subject to the licenses granted to Biogen Idec under Article 6.

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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(d)                                  Biogen Idec Collaboration Technology .  All right, title, and interest in and to the Biogen Idec Collaboration Technology shall be owned by Biogen Idec, subject to the licenses granted to Sunesis under Article 6.

 

(e)                                   All Joint Collaboration Technology .   All right, title and interest in and to (i) the Joint Collaboration Patents other than the Raf/[*] Patents, and (ii) the Joint Collaboration Know-How shall be jointly owned by the Parties.  Biogen Idec shall assign and hereby assigns to Sunesis a joint ownership interest in and to the Joint Collaboration Patents and the Joint Collaboration Know-How.  Sunesis shall assign and hereby assigns to Biogen Idec a joint ownership interest in and to the Joint Collaboration Patents and the Joint Collaboration Know-How.  Except as expressly provided in this Agreement, neither Party shall have any obligation to account to the other for profits, or to obtain any approval of the other Party to license, exploit or enforce the Joint Collaboration Technology, by reason of joint ownership thereof, and each Party hereby waives any right it may have under the laws of any jurisdiction to require any accounting or consent related thereto.  It is understood and agreed that all Joint Collaboration Technology that is jointly owned pursuant to this Section 10.1.1(e) shall be subject to the licenses granted under Article 6.

 

10.1.2                   Sunesis Core Technology .  All right, title and interest in and to the Sunesis Core Technology, and in any improvements to Sunesis Core Technology (i) made using or derived from Sunesis Core Technology, and (ii) made by or under authority of either Party or its Affiliates during the Term of this Agreement, shall, as between the Parties, be owned solely by Sunesis.  Biogen Idec hereby assigns to Sunesis all of its and its Affiliates rights in and to such inventions and improvements made using or derived from Sunesis Core Technology (including all patent and other intellectual property rights therein), subject to the licenses granted to Biogen Idec under Article 6.

 

10.1.3                   Licensed Pre-Existing Technology . All right, title and interest in and to the Licensed Pre-Existing Technology shall, as between the Parties, remain owned solely by Sunesis, subject to the licenses granted to Biogen Idec under Article 6.

 

10.1.4                   Disclosure .  Each Party shall promptly disclose to the other, all inventions relating to Sunesis Collaboration Technology, Joint Collaboration Technology and Sunesis Core Technology conceived or reduced to practice (provided that such conception takes place after the Effective Date) in connection with this Agreement prior to the third (3 rd ) anniversary of the end of the Research Term.

 

10.2                            Patent Prosecution .

 

10.2.1                   Sunesis Core Technology and Raf/[*] Patents .  Sunesis shall have the right to control the preparation, filing, prosecution and maintenance of the Raf/[*] Patents, Licensed Pre-Existing Patents and patent applications and patents directed to Sunesis Core Technology using patent counsel of Sunesis’ choice, provided that such decisions made by Sunesis in the preparation, filing, prosecution, and maintenance of such patents and patent applications shall be

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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reasonable and Sunesis shall employ reasonable efforts not to substantially negatively impact Biogen Idec’s rights hereunder.

 

10.2.2                   Collaboration Patents .  All preparation, filing, prosecution and maintenance of Collaboration Patents shall be governed by this Section 10.2.2.  Biogen Idec and Sunesis shall establish a joint patent committee (the “Joint Patent Committee”) to (i) select patent counsel mutually agreeable to both Parties (the “Joint Patent Counsel”) to prepare, file, prosecute and maintain the Collaboration Patents, and (ii) to control the filing, prosecution, and maintenance of Collaboration Patents. The Joint Patent Committee shall ensure that the Joint Patent Counsel keeps both Parties fully informed as to prosecution activities assigned to the Joint Patent Counsel.  The Joint Patent Committee shall include one (1) representative from each of Biogen Idec and Sunesis.  Sunesis and Biogen Idec may each replace its Joint Patent Committee representative at any time, upon written notice to the other Party.  During the Term of this Agreement, the Joint Patent Committee shall meet at least annually (such meetings may be telephonic), or more frequently as reasonably requested by either Party from time to time, at such locations as the Parties agree, and will otherwise communicate regularly by telephone, electronic mail, facsimile and/or video conference.  With the consent of the Parties, other representatives of Sunesis or Biogen Idec may attend the Joint Patent Committee meetings as nonvoting observers.  Each Party shall be responsible for all of its own expenses associated with attendance of such meetings.  Decisions of the Joint Patent Committee shall be made by unanimous approval of the members present in person or by other means (e.g., teleconference) at any meeting; provided that at least one member from each Party must be so present and voting.  In the event the Parties cannot reach unanimous agreement on a matter relating to prosecution relating to the Biogen Idec and Joint Collaboration Patents under this Section 10.2.2, Biogen Idec shall have final decision making authority; provided such decision is reasonable and does not substantially negatively impact Sunesis’ rights hereunder.  On the other hand, in the event the Parties cannot reach unanimous agreement on a matter relating to prosecution relating to the Sunesis Collaboration Patents under this Section 10.2.2, Sunesis shall have final decision making authority; provided such decision is reasonable and does not substantially negatively impact Biogen Idec’s rights hereunder.  As used herein, “prosecution” shall include interferences, re-examinations, reissues, oppositions and the like.

 

10.2.3                   Prosecution Costs .  During the Term of this Agreement, all costs associated with filing, prosecuting, issuing and maintaining (i) the Raf/[*] Patents, the Sunesis Collaboration Patents, the Licensed Pre-Existing Patents and patent applications and patents within the Sunesis Core Technology shall be borne by Sunesis; and (ii) the Biogen Idec Collaboration Patents and Joint Collaboration Patents shall be borne by Biogen Idec.

 

10.2.4                   Cooperation .  Each Party will cooperate fully with the other Party and provide all information and data, and sign any documents, reasonably necessary and requested by the other Party for the purpose of preparing, filing and prosecuting patent applications pursuant to this Section 10.2.

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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10.2.5                   Abandonment .  Either Party may elect to decline to file or, having filed, decline to further prosecute and maintain or enforce any Collaboration Patents for which they have been granted final decision making authority under Section 10.2.2 above and to which the other Party has received a license under the terms of this Agreement.  In the event that a Party declines to file or, having filed, declines to further prosecute and maintain or enforce any such pending patent rights, then such abandoning Party shall provide the other Party with written notice thereof prior to the expiration of any deadline, without considering any possible extensions thereof, relating to such activities, but in any event at least thirty five (35) business days prior notice.  In such circumstances the non-abandoning Party shall have the right to decide, with reason and with written notice at least thirty (30) business days prior to the deadline, that such abandoning Party should continue to file or prosecute such patent rights.  The abandoning Party shall then have the option to decide, with at least twenty (20) business days notice to the non-abandoning Party to: (i) continue to file or prosecute or enforce such patent rights at its cost and expense, or (ii) allow the non-abandoning Party to file or prosecute such patent rights at its own cost and expense using counsel of its own choice.  In the event that the abandoning Party elects option (ii), then the abandoning Party shall cooperate with the other Party to promptly transfer relevant prosecution materials to the other Party.  It is understood and agreed that transfer of prosecution of particular patent rights pursuant to subsection (ii) above shall not affect the ownership or licenses otherwise provided in this Agreement.

 

10.3                            Enforcement .

 

10.3.1                   Notice .           In the event a Party becomes aware of any actual or potential infringement or misappropriation of the Sunesis Collaboration Technology or Joint Collaboration Technology (a “Subject Infringement”), such Party shall notify the other Party.

 

10.3.2                   Biogen Idec .  Subject to the terms of this Section 10.3.2, Biogen Idec shall have the sole right, but not the obligation, to take legal action to enforce and defend the Sunesis Collaboration Technology or Joint Collaboration Technology against Subject Infringements by Third Parties at its sole cost and expense, to the extent such Subject Infringement is within the field of use of Biogen Idec’s exclusive license under Section 6.2.1 or 6.3.2(b) above.  If, within six (6) months following a request by Sunesis to do so, Biogen Idec fails to take such action to enforce the Sunesis Collaboration Patents or Joint Collaboration Patents with respect to a Subject Infringement, Sunesis or its designee shall, in its sole discretion, have the right, at its sole expense, to take such action.  In addition, Biogen Idec shall have the sole right, but not the obligation, to take legal action to enforce and defend any actual or potential infringement or misappropriation of the Biogen Idec Collaboration Technology.

 

10.3.3                   Sunesis .  To the extent a Subject Infringement is not covered by Section 10.3.2 above, Sunesis (or its designee) shall have the initial right, but not the obligation, to take reasonable legal action to enforce and defend the Sunesis Collaboration Technology or Joint Collaboration Technology against such Subject Infringements by Third Parties at its sole cost and expense.  If, within six (6) months following a request by Biogen Idec to do so, Sunesis fails to take such action to enforce the Sunesis Collaboration Patents or Joint Collaboration Patents with respect to such Subject Infringement, and the Subject Infringement is in a field not licensed exclusively to Sunesis hereunder, Biogen Idec or its designee shall, in its sole discretion, have the right, at its sole expense, to take such action.

 

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10.3.4                   Cooperation; Costs and Recoveries .  If a Party (the “Controlling Party”) brings an action with respect to a Subject Infringement in accordance with this Section 10.3.4 (an “Infringement Action”), then the other Party (the “Cooperating Party”) shall cooperate as reasonably requested, at such Controlling Party’s expense, in the pursuit of such Infringement Action, including if necessary by joining as a nominal Party to the Infringement Action.  In any case, the Cooperating Party shall have the right, even if not required to be joined, to participate in such Infringement Action with its own counsel at its own expense.  The costs and expenses of the Infringement Action shall be the responsibility of the Controlling Party, and any damages or other monetary rewards or settlement payments actually received and retained by the Controlling Party shall first be applied to reimburse the Controlling Party’s out-of-pocket expenses directly attributed to the Infringement Action, then the other Party’s out-of-pocket expenses directly attributed to the Infringement Action, and the remainder shall be shared as follows: [*] percent ([*]%) to the Controlling Party and [*] percent ([*]%) to the other Party.

 

ARTICLE 11
CONFIDENTIALITY

 

11.1                            Confidentiality . During the Term of this Agreement and for a period of five (5) years following the expiration or earlier termination hereof, each Party shall maintain in confidence the Confidential Information of the other Party, shall not use or grant the use of the Confidential Information of the other Party except as expressly permitted hereby, and shall not disclose the Confidential Information of the other Party (in each case, irrespective of whether such Confidential Information is also the Confidential Information of the receiving Party), except (i) on a need-to-know basis to such Party’s directors, officers and employees, (ii) to such Party’s consultants performing work contemplated by the Agreement, and to any bona fide subcontractor performing work for such Party hereunder, or (iii) to the extent such disclosure is reasonably necessary in connection with such Party’s activities under rights and licenses expressly authorized by this Agreement (including the permitted sublicensees).  To the extent that disclosure to any person is authorized by this Agreement, prior to disclosure, a Party shall obtain written agreement of such person to hold in confidence and not disclose, use or grant the use of the Confidential Information of the other Party except as expressly permitted under this Agreement.  Each Party shall notify the other Party promptly upon discovery of any unauthorized use or disclosure of the other Party’s Confidential Information.  Notwithstanding the foregoing, the exceptions set forth in (i), (ii) and (iii) above shall apply to disclosure by Sunesis of Confidential Information of Biogen Idec that is specifically related to an Other Biogen Idec Target or a Collaboration Target (including without limitation the identity of such Targets and any SAR data for such Targets that are Confidential Information of such other Party) solely to the extent such disclosure is necessary for Sunesis and its employees, consultants and subcontractors to perform the Research Program as contemplated by the Research Plan.  In addition, the exceptions set forth in (i), (ii) and (iii) above shall not apply to disclosure by Biogen Idec of Confidential Information of Sunesis that is specifically related to a Sunesis Target.

 

11.2                            Permitted Use and Disclosures .  The confidentiality obligations under this Article 11 shall not apply to the extent that a Party is required to disclose information by

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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applicable law, regulation or order of a governmental agency or a court of competent jurisdiction; provided , however , that such Party shall provide written notice thereof to the other Party (to the extent not prohibited by law or court order), and consult with the other Party with respect to such disclosure to the extent reasonably protectable and provide the other party reasonable opportunity to object to any such disclosure or to request confidential treatment thereof.  Notwithstanding the provisions of this Section, either Party may, to the extent necessary, disclose Confidential Information of the other Party, to any governmental or regulatory authority in connection with the development of a product which it has the right to develop under this Agreement.

 

11.3                            Nondisclosure of Terms .  Each of the Parties hereto agrees not to disclose the financial terms of this Agreement to any Third Party without the prior written consent of the other Party hereto, which consent shall not be unreasonably withheld, except to such Party’s attorneys, advisors, investors, potential bona fide collaborators and Sublicensees, and others on a need to know basis under circumstances that reasonably protect the confidentiality thereof, or to the extent required by law (and with appropriate requests made for confidential treatment), including filings required to made by law with the Securities and Exchange Commission, or any national securities exchange.  Notwithstanding the foregoing, prior to execution of this Agreement, the Parties have agreed upon the substance of information that can be used to describe the terms and conditions of this transaction, and each Party may disclose such information, as modified by mutual written agreement of the Parties, without the consent of the other Party.

 

11.4                            Publication .  Any manuscript by Sunesis or Biogen Idec on subject matter in connection with the Research Program to be published or publicly disclosed, shall be subject to the prior review of the other Party at least thirty (30) days prior to submission.  Further, to avoid loss of patent rights as a result of premature public disclosure of patentable information, the receiving Party shall notify the disclosing Party in writing within thirty (30) days after receipt of any disclosure whether the receiving Party desires to file a patent application on any invention disclosed in such scientific results.  In the event that the receiving Party desires to file such a patent application, the disclosing Party shall withhold publication or disclosure of such scientific results until the earlier of (i) a patent application is filed thereon, (ii) the Parties determine after consultation that no patentable invention exists, or (iii) ninety (90) days after receipt by the disclosing Party of the receiving Party’s written notice of the receiving Party’s desire to file such patent application.  Further, if such scientific results contain the information of the other Party that is subject to use and nondisclosure restrictions under this Article 11, the publishing Party agrees to remove such information from the proposed publication or disclosure.  Following the filing of any patent application within the Joint Collaboration Technology, in the period prior to the publication of such a patent application, neither Party shall make any written public disclosure regarding any invention claimed in such patent application without the prior consent of the other Party.

 

ARTICLE 12
REPRESENTATIONS AND WARRANTIES

 

12.1                            Warranty .  Each Party represents and warrants on its own behalf and on behalf of its Affiliates that:

 

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(i)                                      Such Party is duly organized, validly existing and in good standing under the laws of the jurisdiction in which it is organized.
 

(ii)                                   It has the legal power and authority to enter into this Agreement and to perform all of its obligations hereunder.

 

(iii)                                This Agreement is a legal and valid obligation binding upon it and enforceable in accordance with its terms.

 

(iv)                               All necessary consents, approvals and authorizations of all governmental authorities and other persons or entities required to be obtained by such Party in connection with this Agreement have been obtained.

 

(v)                                  The execution and delivery of this Agreement and the performance of such Party’s obligations hereunder (a) do not conflict with or violate any requirement of applicable laws, regulations or orders of governmental bodies; and (b) do not conflict with, or constitute a default under, any contractual obligation of such Party.  Neither Party will enter into any agreement with any Third Party that conflicts with the terms of this Agreement.

 

12.2                            Additional Warranty of Sunesis .  Sunesis represents and warrants that, to the best of its knowledge as of the Effective Date, the practice of the Sunesis Core Technology is not generally dominated by patent rights of a Third Party.  As of the Effective Date, Sunesis has not received any notice of infringement from any Third Party relating to the Sunesis Core Technology or any notice challenging the validity of the Sunesis Core Technology nor does Sunesis have any knowledge of any infringement relating to any of the Sunesis Core Technology. It is understood that Sunesis makes no representation or warranty with respect to any patent rights of Third Parties relating to the Collaboration Targets.

 

12.3                            Disclaimer .  EXCEPT AS OTHERWISE EXPRESSLY SET FORTH IN THIS AGREEMENT, NEITHER PARTY MAKES ANY REPRESENTATIONS OR WARRANTIES OF ANY KIND, EITHER EXPRESS OR IMPLIED, WITH RESPECT TO THE COLLABORATION TECHNOLOGY, LICENSED PRE-EXISTING TECHNOLOGY, SUNESIS CORE TECHNOLOGY, COLLABORATION COMPOUNDS, OTHER COMPOUNDS, OR CONFIDENTIAL INFORMATION, INCLUDING, BUT NOT LIMITED TO, WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, VALIDITY OF ANY COLLABORATION TECHNOLOGY, PATENTED OR UNPATENTED, OR NONINFRINGEMENT OF THE INTELLECTUAL PROPERTY RIGHTS OF THIRD PARTIES.

 

ARTICLE 13
INDEMNIFICATION

 

13.1                            Biogen Idec .  Biogen Idec shall indemnify, defend and hold harmless Sunesis and its Affiliates and their respective directors, officers, employees, agents and their respective successors, heirs and assigns from and against any losses, costs, claims, damages, liabilities or expense (including reasonable attorneys’ and professional fees and other expenses of litigation) (collectively, “Liabilities”) resulting from any claims, demands, actions or other proceedings by

 

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any Third Party to the extent resulting from: (i) the manufacture, use, sale, handling or storage of Products,  Co-Funded Products or Other Biogen Idec Products by Biogen Idec or its Affiliates or Sublicensees or other designees; (ii) the breach by Biogen Idec of the representations and warranties made in this Agreement; or (iii) the negligence or intentional misconduct of Biogen Idec or any of its agents or employees or failure of Biogen Idec or any of its agents or employees to comply with applicable laws and regulations; except, in each case, to the extent such Liabilities result from a material breach of this Agreement by Sunesis, negligence or intentional misconduct of Sunesis or any of its agents or employees (including sales representatives involved in co-promoting any Co-Promoted Product) or failure of Sunesis or any of its employees or agents to comply with applicable laws or regulations.

 

13.2                            Sunesis .  Sunesis agrees to indemnify, defend and hold harmless Biogen Idec and its Affiliates and their respective directors, officers, employees, agents and their respective heirs and assigns from and against any Liabilities resulting from any claims, demands, actions or other proceedings by any Third Party to the extent resulting from: (i) the manufacture, use, sale, handling or storage of Sunesis Products, Co-Promoted Products or Reverted Products by Sunesis or its Affiliates or Sublicensees or other designees, (ii) the breach by Sunesis of its representations and warranties made in this Agreement, or (iii) the negligence or intentional misconduct of Sunesis or any of its agents or employees or failure of Sunesis or any of its agents or employees to comply with applicable laws and regulations; except, in each case, to the extent such Liabilities result from a breach of this Agreement by Biogen Idec, negligence or intentional misconduct of Biogen Idec or any of its agents or employees (including sales representatives involved in co-promoting any Co-Promoted Product) or failure of Biogen Idec or any of its employees or agents to comply with applicable laws or regulations.

 

13.3                            Procedure .  If a Party (the “Indemnitee”) intends to claim indemnification under this Section 13, it shall promptly notify the other Party (the “Indemnitor”) in writing of any claim, demand, action or other proceeding for which the Indemnitee intends to claim such indemnification, and the Indemnitor shall have the right to participate in, and, to the extent the Indemnitor so desires, to assume the defense thereof with counsel mutually satisfactory to the Parties; provided, however, that an Indemnitee shall have the right to retain its own counsel, with the fees and expenses to be paid by the Indemnitor, if representation of such Indemnitee by the counsel retained by the Indemnitor would be inappropriate due to actual or potential differing interests between the Indemnitee and any other Party represented by such counsel in such proceeding.  The obligations of this Article 13 shall not apply to amounts paid in settlement of any claim, demand, action or other proceeding if such settlement is effected without the consent of the Indemnitor, which consent shall not be withheld or delayed unreasonably.  The failure to deliver written notice to the Indemnitor within a reasonable time after the commencement of any such action, if prejudicial to its ability to defend such action, shall relieve the Indemnitor of any obligation to the Indemnitee under this Article 13.  The Indemnitee, its employees and agents, shall reasonably cooperate with the Indemnitor and its legal representatives in the investigation of any claim, demand, action or other proceeding covered by this Article 13.

 

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ARTICLE 14
TERM AND TERMINATION

 

14.1                            Term .  The Term of this Agreement shall commence on the Effective Date, and shall continue in full force and effect on a country-by-country, Product-by-Product, Sunesis Product-by-Sunesis Product, Other Biogen Idec Product-by-Other Biogen Idec Product and Reverted Product-by-Reverted Product basis until expiration of both Parties’ royalty payment obligations in such country with respect to such Products, Sunesis Products, Other Biogen Idec Products or Reverted Products, as applicable, in each case unless earlier terminated as provided in this Article 14 (the “Term”).

 

14.2                            Termination for Breach .  Either Party to this Agreement may terminate this Agreement in the event the other Party hereto shall have materially breached or defaulted in the performance of any of its material obligations hereunder, and such default shall have continued for sixty (60) days after written notice thereof was provided to the breaching Party by the non-breaching Party.  Any termination shall become effective at the end of such sixty (60) day period unless the breaching Party has cured any such breach or default prior to the expiration of the sixty (60) day period.  Notwithstanding the foregoing, failure by either Party to use Commercially Reasonable and Diligent Efforts with respect to the development and commercialization of a Product, Other Biogen Idec Product, Sunesis Product or Reverted Product shall not be deemed a breach of this Agreement.

 

14.3                            Termination For Bankruptcy .  Either Party hereto shall have the right to terminate this Agreement forthwith by written notice to the other Party (i) if the other Party is declared insolvent or bankrupt by a court of competent jurisdiction, (ii) if a voluntary or involuntary petition in bankruptcy is filed in any court of competent jurisdiction against the other Party and such petition is not dismissed within ninety (90) days after filing, (iii) if the other Party shall make or execute an assignment of substantially all of its assets for the benefit of creditors, or (iv) substantially all of the assets of such other Party are seized or attached and not released within ninety (90) days thereafter.  All rights and licenses granted under this Agreement by one Party to the other Party are, and shall otherwise be deemed for purposes of Section 365(n) of the Bankruptcy Code, licenses of rights to “intellectual property” as defined under Section 101 (56) of the Bankruptcy Code.  The Parties agree that the licensing Party under this Agreement shall retain and may fully exercise all of its rights and elections under the Bankruptcy Code in the event of a bankruptcy by the other Party.  The Parties further agree that in the event of the commencement of a bankruptcy proceeding by or against one Party under the Bankruptcy Code, the other Party shall be entitled to complete access to any such intellectual property pertaining to the rights granted in the licenses hereunder of the Party by or against whom a bankruptcy proceeding has been commenced and all embodiments of such intellectual property.

 

14.4                            Termination for Convenience by Biogen Idec .  Provided that Biogen Idec is not in breach of this Agreement, Biogen Idec will have the right to terminate this Agreement at any time, subject to the following:

 

14.4.1                   At any time prior to the second (2 nd ) anniversary of the Effective Date, Biogen Idec will have the right to terminate this Agreement (i) by providing Sunesis written

 

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notice at least six (6) months in advance, or (ii) immediately upon providing Sunesis written notice and payment to Sunesis of a termination fee equal to [*] U.S. Dollars ($[*]).

 

14.4.2                   Beginning on the second (2 nd ) anniversary of the Effective Date, Biogen Idec will have the right to terminate this Agreement by providing Sunesis written notice at least ninety (90) days in advance.  It is understood that notice may not be given under this Section 14.4.2 prior to the second (2 nd ) anniversary of the Effective Date.

 

14.5                            Effect of Breach or Termination .

 

14.5.1                   Accrued Rights and Obligations .  Termination of this Agreement for any reason shall not release either Party hereto from any liability which, at the time of such termination, has already accrued to the other Party or which is attributable to a period prior to such termination nor preclude either Party from pursuing any rights and remedies it may have hereunder or at law or in equity with respect to any breach of this Agreement.

 

14.5.2                   Termination by Biogen Idec for Breach or Bankruptcy of Sunesis .  In the event of termination of this Agreement by Biogen Idec pursuant to Section 14.2 due to Sunesis’ breach or by Biogen Idec pursuant to Section 14.3 for Sunesis’ bankruptcy, in addition to those provisions surviving under Section 14.8, the following shall apply:

 

(a)           Sections 2.8.2 (Research Records); 2.8.3 (Inspections) (but only with respect to Biogen Idec’s rights and Sunesis’ obligations); 6.2.4 (Reverted Products) (but only with respect to Reverted Products in existence as of the effective date of such termination); 7.3 (Research Milestones); 7.4 (Development Milestones); 7.5 (Royalties on Annual Net Sales of Products); 7.6 (Royalties on Net Sales of Sunesis Products and Non-Kinase Other Biogen Idec Products) (except that any royalties payable by Biogen Idec under Sections 7.3, 7.4, 7.5, and 7.6, commencing upon such termination and continuing thereafter, shall be reduced by fifty percent (50%)); 7.7 (Royalty Term); Article 10 (Intellectual Property)(other than Sections 10.1.4, 10.2.2 and 10.2.3, which shall terminate); and Exhibit 3.5 (Reverted Products) (but only with respect to Reverted Products in existence as of the effective date of such termination) shall survive.

 

(b)          Biogen Idec shall control prosecution of the all Collaboration Patents (including Sunesis, Biogen Idec and Joint) at its own expense.  Sunesis shall be given the opportunity to review Biogen Idec’s activities and reasonably consult with Biogen Idec with respect to Sunesis Collaboration Patents and Joint Collaboration Patents, and Biogen Idec shall in good faith consider including in such patent applications such claims as Sunesis reasonably requests.  Biogen Idec shall keep Sunesis reasonably informed as to the status of such patent matters, including without limitation by providing Sunesis with (i) copies of any documents relating to Sunesis Collaboration Patents and Joint Collaboration Patents which Biogen Idec receives from any patent office within twenty (20) days of receipt thereof, including notice of all interferences, reissues, reexaminations, oppositions or requests for patent term extensions, and (ii) the opportunity to review and comment on any documents relating to Sunesis Collaboration Patents and Joint Collaboration Patents which will be filed in any patent office as soon

 


[ * ] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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practicable but in all cases at least twenty (20) days prior to such filing.  All costs associated with filing, prosecuting, issuing and maintaining the Licensed Pre-Existing Patents and patent applications and patents within the Sunesis Core Technology shall be borne by Sunesis.  In conducting the prosecution activities described in this Section 14.5.2(b), each Party shall employ reasonable efforts not to substantially negatively impact the other Party’s rights under the surviving provisions of this Agreement.

 

(c)           Sunesis’ rights and obligations under Section 3.2.3 shall survive with respect to Co-Funded Products for which Sunesis has exercised its Co-Funding Option prior to such termination, and Biogen Idec shall pay royalties on any such Co-Funded Products in accordance with Section 7.5.2.  Biogen Idec shall no longer be obligated to provide the detailed plans required of a Co-Development Plan and Budget to Sunesis, but shall provide Sunesis with annual budgets of post Phase I Development Costs for any such Co-Funded Products.  Sunesis’ Co-Funding Option with respect to future Products shall terminate, as will Article 4, as well as Sunesis’ right to participate in the JDC under Section 5.4 and any Product Teams under Section 3.3.

 

14.5.3                   Termination by Sunesis for Breach or Bankruptcy of Biogen Idec .  In the event of termination of this Agreement by Sunesis pursuant to Section 14.2 due to Biogen Idec’s breach or by Sunesis pursuant to Section 14.3 for Biogen Idec’s bankruptcy, in addition to those provisions surviving under Section 14.8, the following shall apply:

 

(a)           Sections 2.8.2 (Research Records); 2.8.3 (Inspections)(but only with respect to Sunesis’ rights and Biogen Idec’s obligations); 3.5 (Reverted Products); 6.2.4 (Reverted Products); 7.3 (Research Milestones); 7.4 (Development Milestones); 7.5 (Royalties on Annual Net Sales of Products); 7.6 (Royalties on Net Sales of Sunesis Products and Other Biogen Idec Products); (except that any royalties payable by Sunesis under Sections 7.5 and 7.6, commencing upon such termination and continuing thereafter, shall be reduced by fifty percent (50%)); 7.7 (Royalty Term); Article 9 (Diligence); Article 10 (Intellectual Property)(other than Sections 10.1.4, 10.2.2 and 10.2.3, which shall terminate); and Exhibit 3.5 (Reverted Products) shall survive.

 

(b)          Biogen Idec shall control prosecution of the all Biogen Idec Collaboration Patents and Joint Collaboration Patents at its own expense.  Sunesis shall control prosecution of all Sunesis Collaboration Patents at its own expense.  Sunesis shall be given the opportunity to review Biogen Idec’s activities and reasonably consult with Biogen Idec with respect to Sunesis Collaboration Patents and Joint Collaboration Patents, and Biogen Idec shall in good faith consider including in such patent applications such claims as Sunesis reasonably requests.  Biogen Idec shall keep Sunesis reasonably informed as to the status of such patent matters, including without limitation by providing Sunesis with (i) copies of any documents relating to Sunesis Collaboration Patents and Joint Collaboration Patents which Biogen Idec receives from any patent office within twenty (20) days of receipt thereof, including notice of all interferences, reissues, reexaminations, oppositions or requests for patent term extensions, and (ii) the opportunity to review and comment on any documents relating to Sunesis Collaboration Patents and Joint Collaboration Patents which will be filed in any patent office as soon practicable but in all cases at least twenty (20) days prior to such filing.  All costs associated with filing, prosecuting, issuing and maintaining the Licensed Pre-Existing Patents and patent

 

56



 

applications and patents within the Sunesis Core Technology shall be borne by Sunesis.  In conducting the prosecution activities described in this Section 14.5.3(b), each Party shall employ reasonable efforts not to substantially negatively impact the other Party’s rights under the surviving provisions of this Agreement.

 

(c)           Biogen Idec’s rights with respect to Co-Funded Products and the Co-Funded Option shall be as follows:

 

(i)                                      With respect to any Co-Funded Product for which Sunesis has exercised its Co-Funding Option, and for which Biogen Idec has not obtained Regulatory Approval in any territory in the Co-Funded Territory for such Co-Funded Product, in each case as of the effective date of such termination, such Co-Funded Product shall become a Reverted Product in accordance with Section 3.5 and Exhibit 3.5 and Sunesis shall thereafter pay royalties to Biogen Idec on Net Sales of such Reverted Product in accordance with Section 7.5.1.
 
(ii)                                   With respect to any Co-Funded Product for which Sunesis has exercised its Co-Funding Option, and for which Biogen Idec has obtained Regulatory Approval in any territory in the Co-Funded Territory for such Co-Funded Product, in each case as of the effective date of such termination, Sunesis’ rights and obligations under Section 3.2.3 shall survive, and Biogen Idec shall pay royalties on any such Co-Funded Products in accordance with Section 7.5.2.  Biogen Idec shall no longer be obligated to provide the detailed plans required of a Co-Development Plan and Budget to Sunesis, but shall provide Sunesis with annual budgets of post Phase I Development Costs for any such Co-Funded Products.  Sunesis’ Co-Funding Option with respect to future Products shall terminate, as will Article 4, as well as Sunesis’ right to participate in the JDC under Section 5.4 and any Product Teams under Section 3.3.
 
(iii)                                Sunesis’ Co-Funding Option under Section 3.2 with respect to future Products shall continue (i.e. with respect to Products that are not Co-Funded Products as of the effective date of such termination), provided that Biogen Idec shall no longer be obligated to provide for each Product the detailed plans and clinical data required of an Initial Development Plan and Phase II Notice pursuant to Section 3.2.1.  Biogen Idec shall, however, provide Sunesis with annual budgets of post Phase I Development Costs for such Co-Funded Product in accordance with the timetable for a Phase II Notice set forth in Section 3.2.1, and shall provide reasonable cooperation to Sunesis in evaluating such Product and the post Phase I Development Costs related thereto, including consulting with Sunesis in good faith regarding such annual budgets and the financial, scientific and regulatory assumptions reflected therein.
 

14.6                            Termination by Biogen Idec for Convenience .  In the event of termination of this Agreement by Biogen Idec pursuant to Section 14.4, in addition to those provisions surviving under Section 14.8, the following shall apply:

 

14.6.1                   Sections 2.8.2 (Research Records); 2.8.3 (Inspections); Articles 3 (Product Development); 4 (Product Commercialization); 5 (Management) (other than Section 5.3, which shall terminate); 6.2.4 (Reverted Products); 7.3 (Research Milestones); 7.4 (Development Milestones); 7.5 (Royalties on Annual Net Sales of Products); 7.6 (Royalties on Net Sales of Sunesis Products and Other Biogen Idec Products); (except that any royalties payable by Sunesis

 

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under Sections 7.5 and 7.6, commencing upon such termination and continuing thereafter, shall be reduced by fifty percent (50%)); Section 7.7 (Royalty Term); Article 9 (Diligence); Article 10 (Intellectual Property)(other than Sections 10.1.4, 10.2.2 and 10.2.3, which shall terminate); and Exhibit 3.5 (Reverted Products) shall survive.

 

14.6.2                   Biogen Idec shall control prosecution of the all Biogen Idec Collaboration Patents and Joint Collaboration Patents at its own expense.  Sunesis shall control prosecution of all Sunesis Collaboration Patents at its own expense.  Sunesis shall be given the opportunity to review Biogen Idec’s activities and provide input with respect to Sunesis Collaboration Patents and Joint Collaboration Patents, and Biogen Idec shall in good faith consider including in such patent applications such claims as Sunesis reasonably requests.  Biogen Idec shall keep Sunesis reasonably informed as to the status of such patent matters, including without limitation by providing Sunesis with (i) copies of any documents relating to Sunesis Collaboration Patents and Joint Collaboration Patents which Biogen Idec receives from any patent office within twenty (20) days of receipt thereof, including notice of all interferences, reissues, reexaminations, oppositions or requests for patent term extensions, and (ii) the opportunity to review and comment on any documents relating to Sunesis Collaboration Patents and Joint Collaboration Patents which will be filed in any patent office as soon practicable but in all cases at least twenty (20) days prior to such filing.  All costs associated with filing, prosecuting, issuing and maintaining the Licensed Pre-Existing Patents and patent applications and patents within the Sunesis Core Technology shall be borne by Sunesis.  In conducting the prosecution activities described in this Section 14.6.2, each Party shall employ reasonable efforts not to substantially negatively impact the other Party’s rights under the surviving provisions of this Agreement.

 

14.6.3                   Biogen Idec’s rights with respect to Co-Funded Products and the Co-Funded Option shall be as follows:

 

(a)           With respect to any Co-Funded Product for which Sunesis has exercised its Co-Funding Option, and for which Biogen Idec has not obtained Regulatory Approval in any territory in the Co-Funded Territory for such Co-Funded Product, in each case as of the effective date of such termination, such Co-Funded Product shall become a Reverted Product in accordance with Section 3.5 and Exhibit 3.5 and Sunesis shall thereafter pay royalties to Biogen Idec on Net Sales of such Reverted Product in accordance with Section 7.5.1.

 

(b)          With respect to any Co-Funded Product for which Sunesis has exercised its Co-Funding Option, and for which Biogen Idec has obtained Regulatory Approval in any territory in the Co-Funded Territory for such Co-Funded Product, in each case as of the effective date of such termination, Sunesis’ rights and obligations under Section 3.2.3 shall survive, and Biogen Idec shall pay royalties on any such Co-Funded Products in accordance with Section 7.5.2.  Biogen Idec shall no longer be obligated to provide the detailed plans required of a Co-Development Plan and Budget to Sunesis, but shall provide Sunesis with annual budgets of post Phase I Development Costs for any such Co-Funded Products.  Sunesis’ Co-Funding Option with respect to future Products shall terminate, as will Article 4, as well as Sunesis’ right to participate in the JDC under Section 5.4 and any Product Teams under Section 3.3.

 

(c)           Sunesis’ Co-Funding Option under Section 3.2 with respect to future Products shall continue (i.e. with respect to Products that are not Co-Funded Products as of the

 

58



 

effective date of such termination), provided that Biogen Idec shall no longer be obligated to provide for each Product the detailed plans and clinical data required of an Initial Development Plan and Phase II Notice pursuant to Section 3.2.1.  Biogen Idec shall, however, provide Sunesis with annual budgets of post Phase I Development Costs for such Co-Funded Product in accordance with the timetable for a Phase II Notice set forth in Section 3.2.1, and shall provide reasonable cooperation to Sunesis in evaluating such Product and the post Phase I Development Costs related thereto, including consulting with Sunesis in good faith regarding such annual budgets and the financial, scientific and regulatory assumptions reflected therein.

 

14.7                            Transition of Information and Materials .  With respect to a Party’s obligation to transition Collaboration Technology, information and material with respect to a particular compound, each Party shall cooperate fully (and cause its Affiliates to cooperate fully) with the other Party to facilitate a smooth and prompt transition of Collaboration Technology, information and materials that are necessary or useful for the receiving Party to further research, develop, or otherwise exploit such target and compounds in the Field.

 

14.8                            Survival Sections .  In addition to the provisions set forth in Sections 14.5.2, 14.5.3 and 14.6 above, as applicable, the following provisions shall survive the expiration or termination of this Agreement for any reason: Articles 1 (Definitions), 8 (Payments, Books and Records), 11 (Confidentiality), 12 (Representations and Warranties), 13 (Indemnification), 14 (Term and Termination), 15 (Dispute Resolution) and 16 (Miscellaneous); and Sections 2.5.6, 2.5.7, 2.5.8, 2.5.9(c), 6.1.1(c), 6.1.2(b), Sections 6.2.1, 6.2.2 (Commercialization Licenses to Biogen Idec for Target Selective Compounds); 6.3 (Other Compounds); 6.4 and 6.5.

 

ARTICLE 15

DISPUTE RESOLUTION

 

15.1                            Escalation to Senior Executives .  In the event of a dispute or matter of significant concern arises between the Parties, then at the request of either Party, the matter shall be escalated to a senior executive from each Party.  Such senior executive shall be either the CEO of such Party, or another senior executive of such Party who both reports to the CEO and who has direct management responsibility for the matter in dispute.  Upon such request, such senior executives shall make themselves reasonably available to meet, and shall meet either by telephone or if, specifically requested, in person, to attempt to resolve such matter, and shall thereafter continue to use good faith efforts to attempt to resolve such matter unless it becomes clear that the matter cannot be resolved by mutual agreement.  Thereafter either Party may pursue such legal process as is otherwise available under applicable law, except as otherwise set forth in Section 5.1.4 above or Section 15.2 below.

 

15.2                            Independent Scientific Verification of Certain Disputes .

 

15.2.1                   Independent Measurements .  In the event the Parties are unable to reach agreement regarding (i) whether or not a compound or product is Target Selective against a certain Target, (ii) the IC50 of a particular “selected lead” as that term is defined in Section 1.41 above, or (iii) any other independently verifiable scientific determination or measurement, and the Parties have not resolved such dispute through good faith negotiations, such dispute will be resolved through performance of the relevant determination by an independent Third Party.  The

 

59



 

findings of such Third Party with respect to such dispute shall be binding on the Parties, and the costs of such testing shall be shared equally by the Parties.

 

15.2.2                   Other Determinations . In the event that the Parties are unable to reach agreement regarding (i) the establishment of Selectivity Parameters pursuant to Section 2.5.9; or (ii) designating the variant species of a protein to be included with a specific Target pursuant to Section 2.5.9, and the Parties have not resolved such dispute through good faith negotiations, such dispute shall be resolved in accordance with this Section 15.2.2.  Upon written request by either Party, a dispute described in the preceding sentence will be resolved through the binding determination by a mutually agreed independent expert in the relevant field of biochemistry.  In the event the Parties cannot agree on such independent Third Party, then each Party shall nominate an independent scientist with appropriate expertise, and the Parties’ nominees shall select the independent expert to perform the binding determination.  Each Party shall prepare a written report setting forth its position or proposal with respect to the Selectivity Parameters and/or Target scope, as applicable, and shall submit such report to the independent expert within ten (10) days after selection of such expert.  The expert shall select one of the requested positions as his or her decision, and shall not have the authority to render any substantive decision other than to so select the position of either Biogen Idec or Sunesis.  The findings of such Third Party with respect to such dispute shall be binding on the Parties, and the costs of such testing shall be borne by the losing Party.

 

15.3                            Injunctive Relief .  This Article  15 shall not be construed to prohibit either Party from seeking preliminary or permanent injunctive relief, restraining order or degree of specific performance in any court of competent jurisdiction to the extent not prohibited by this Agreement.  For avoidance of doubt, any such equitable remedies provided under this Article 15 shall be cumulative and not exclusive and are in addition to any other remedies, which either Party may have under this Agreement or applicable law.

 

15.4                            Matters to Proceed to Court .  Notwithstanding the foregoing, any dispute relating to the determination of validity of a Party’s patents or other issues relating solely to a Party’s intellectual property and any dispute asserting breach of this Agreement or of the representations and warranties made hereunder shall be submitted exclusively to the federal court in Delaware, and the Parties hereby consent to the jurisdiction and venue of such court.

 

ARTICLE 16
MISCELLANEOUS

 

16.1                            Governing Laws .  This Agreement and any dispute arising from the construction, performance or breach hereof shall be governed by and construed, and enforced in accordance with, the laws of the state of Delaware, without reference to conflicts of laws principles.

 

16.2                            Waiver .  It is agreed that no waiver by either Party hereto of any breach or default of any of the covenants or agreements herein set forth shall be deemed a waiver as to any subsequent and/or similar breach or default.

 

16.3                            Assignment .  This Agreement shall not be assignable by either Party without the written consent of the other Party hereto, except either Party may assign this Agreement without

 

60



 

such consent to its Affiliates, or to an entity that acquires all or substantially all of the business or assets of such Party whether by merger, reorganization, acquisition, sale, or otherwise; provided, however, that the assignee shall agree in writing to be bound by the terms and conditions of this Agreement.

 

16.4                            Independent Contractors .  The relationship of the Parties hereto is that of independent contractors.  The Parties hereto are not deemed to be agents, partners or joint venturers of the others for any purpose as a result of this Agreement or the transactions contemplated thereby.

 

16.5                            Compliance with Laws .  In exercising their rights under this license, the Parties shall fully comply in all material respects with the requirements of any and all applicable laws, regulations, rules and orders of any governmental body having jurisdiction over the exercise of rights under this license including, without limitation, those applicable to the discovery, development, manufacture, distribution, import and export and sale of Products pursuant to this Agreement.

 

16.6                            Patent Marking .  Biogen Idec agrees to mark and use reasonable efforts to make all its Sublicensees mark all Products and Other Biogen Idec Products sold pursuant to this Agreement in accordance with the applicable statute or regulations relating to patent marking in the country or countries of manufacture and sale thereof.  Sunesis agrees to mark and use reasonable efforts to make its Sublicensees mark all Sunesis Products sold pursuant to this Agreement in accordance with the applicable statute or regulations relating to patent marking in the country or countries of manufacture and sale thereof.

 

16.7                            Notices .  All notices, requests and other communications hereunder shall be in writing and shall be personally delivered or by registered or certified mail, return receipt requested, postage prepaid, in each case to the respective address specified below, or such other address as may be specified in writing to the other Parties hereto and shall be deemed to have been given upon receipt:

 

Sunesis:                                                                                                    Sunesis Pharmaceuticals, Inc.

341 Oyster Point Boulevard

South San Francisco, California 94080

Attn: Daryl Winter, General Counsel

Fax: (650) 266-3505

 

With a copy to:                                                              Wilson Sonsini Goodrich & Rosati

Professional Corporation

650 Page Mill Road

Palo Alto, California 94304-1050

Attn: Kenneth A. Clark, Esq.

Fax: (650) 493-6811

 

 

Biogen Idec

Biogen Idec

 

MA Inc.

14 Cambridge Center

 

61



 

Cambridge, MA  02141

Attn: Associate Director, Research Operations

Fax: (617)-679-2616

 

With a copy to:                                                              Biogen Idec MA Inc.

14 Cambridge Center

Cambridge, MA  02141

Attn: General Counsel

Fax: (617)-679-2838

 

16.8                            Severability .  In the event that any provision of this Agreement becomes or is declared by a court of competent jurisdiction to be illegal, unenforceable or void, this Agreement shall continue in full force and effect to the fullest extent permitted by law without said provision, and the Parties shall amend the Agreement to the extent feasible to lawfully include the substance of the excluded term to as fully as possible realize the intent of the Parties and their commercial bargain.  If a Party seeks to avoid a provision of this Agreement by asserting that such provision is invalid, illegal or otherwise unenforceable, the other Party shall have the right to terminate this Agreement upon sixty (60) days’ prior written notice to the asserting Party, unless such assertion is eliminated and cured within such sixty (60) day period.  If Biogen Idec has sought to so avoid a provision of this Agreement, such termination shall be deemed a termination by Biogen Idec under Section 14.4 above, and if Sunesis has sought such an avoidance, such termination shall be deemed a termination for breach by Sunesis under Section 14.2 above.

 

16.9                            Advice of Counsel .  Sunesis and Biogen Idec have each consulted counsel of their choice regarding this Agreement, and each acknowledges and agrees that this Agreement shall not be deemed to have been drafted by one Party or another and will be construed accordingly.

 

16.10                      Performance Warranty .  Each Party hereby warrants and guarantees the performance of any and all rights and obligations of this Agreement by its Affiliates and Sublicensees.

 

16.11                      Complete Agreement .  This Agreement with its Exhibits, constitutes the entire agreement, both written and oral, between the Parties with respect to the subject matter hereof, and all prior agreements respecting the subject matter hereof, either written or oral, express or implied, shall be abrogated, canceled, and are null and void and of no effect.  No amendment or change hereof or addition hereto shall be effective or binding on either of the Parties hereto unless reduced to writing and executed by the respective duly authorized representatives of Sunesis and Biogen Idec.

 

16.12                      Headings .  The captions to the several Sections and Articles hereof are not a part of this Agreement, but are included merely for convenience of reference and shall not affect its meaning or interpretation.

 

16.13                      Counterparts .  This Agreement may be executed in counterparts, each of which shall be deemed to be an original and all of which together shall be deemed to be one and the same agreement.

 

62



 

IN WITNESS WHEREOF, the Parties hereto have caused this Agreement to be duly executed by their authorized representatives and delivered in duplicate originals as of the Effective Date.

 

BIOGEN IDEC MA INC.

SUNESIS PHARMACEUTICALS, INC.

 

 

 

 

By:

/s/ Mark Wiggins

 

By:

/s/ D.N. Swisher, Jr.

 

 

Name:

Mark Wiggins

 

Name:

D.N. Swisher, Jr.

 

 

Title:

EVP, Business Development

 

Title:

CEO

 

63



 

EXHIBIT 1.13.1

 

Hit Compound Criteria

 

Soluble (not covalently attached) compounds in at least [*] chemical series with SAR and properties that indicate clear opportunity for optimization as determined by the Parties.

 

Activity

 

      Enzyme activity [*] with clear evidence of SAR

      Cell activity [*] in mechanistic cell-based assays

      [*] selective against key undesirable countertargets (e.g. countertargets that would produce unacceptable toxicity or safety issues)

      SAR consistent over at least [*] activity

 

Physicochemical properties

 

      MW <600

      [*]LogD[*]

      Solubility [*]

      in vitro assays (MDCK, Caco-2) show medium to high permeability and no transporter activity

      Stability in human plasma, liver microsomes [*]% after 1 hr

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

64



 

EXHIBIT 1.13.2

 

Lead Compound Criteria

 

At least [*] compound series that will be optimized to identify a Safety Assessment Candidate

 

Biological activity

 

                  Biochemical IC50 [*]

                  Cell-based activity [*]

                              Consistent SAR between enzyme and cell activity

                  [*]-fold selective over close or undesirable kinases

 

Physicochemical properties

                  MW [*]

                  [*]LogD[*]

                  Solubility [*]

 

ADME/PK that support progression as a high quality drug candidate

In vitro ADME consistent with good drug-like characteristics

 

                  HLM Stability [*]% remaining at [*]

                  Medium to good permeability ([*]) as measured in MDCK, CaCO-2, or comparable system

                  Stability in stimulated gastric and intestinal fluid (if PO dosing)

                  p450 inhibition [*]

                  No exclusive metabolism by major polymorphic p450 enzymes

                  Acceptable protein binding ([*])

                  PK profile shows generally good characteristics

                  Clearance below liver blood flow

                  T1/2  [*]

                  %F [*]% if PO dosing required/desired

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

65



 

Execution Copy

EXHIBIT 1.38

 

Sunesis Core Technology

 

Sunesis No.

 

Serial No.

 

Title

 

Status

UC-100

 

US 09/049,754

 

Pharmacophore Recombination For the Identification of Small Molecule Drug Lead Compounds

 

Issued as U.S. Patent No. 6,344,330

UC-100 AU

 

32113/99

 

Pharmacophore Recombination For the Identification of Small Molecule Drug Lead Compounds

 

Issued as AU Patent No. 759327

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

SU-100

 

US 09/105,372

 

Methods for Rapidly Identifying Small Organic Molecule Ligands for Binding to Biological Target Molecules

 

Issued as U.S. Patent No. 6,335,155

[*]

 

[*]

 

[*]

 

pending

SU-100 D1C1

 

US 10/043,833

 

Methods for Rapidly Identifying Small Organic Molecule Ligands for Binding to Biological Target Molecules

 

allowed

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

66



 

Sunesis No.

 

Serial No.

 

Title

 

Status

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

SU-630 PCT

 

US03/06217

 

Methods for Identifying Compounds that Modulate Enzymatic Activity

 

Published as WO 03/087054

[*]

 

[*]

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

SU-1400 PCT

 

US03/08725

 

Identification of Kinase Inhibitors

 

Published as WO 03/081210

[*]

 

 

 

[*]

 

pending

 

67



 

Sunesis No.

 

Serial No.

 

Title

 

Status

[*]

 

[*]

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

 

 

[*]

 

pending

[*]

 

[*]

 

[*]

 

pending

SU-1800 PCT

 

US03/10831

 

Methods for Identifying Exosites

 

Published as WO 03/087051

[*]

 

[*]

 

[*]

 

pending

SU-2200 PCT

 

US03/10209

 

Methods and Materials to Find and Characterize Molecular Interaction Sites on Proteins

 

Published as WO 03/087299

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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EXHIBIT 2.2

 

Research Plan

 

Overview of Research Plan

 

The research plan is designed to employ Sunesis’ Tethering SM with extenders lead-finding approach to identify novel inhibitors of protein kinases with the goal of optimizing these to identify Development Candidate compounds for [*] kinase targets.

 

During approximately the first [*] months of the collaboration, the research plan will focus on 2 activities:

 

(a)                                   [*] utilizing Tethering SM with extenders.  The priority focus of this work is to apply Tethering SM to efficiently [*] up to [*] and advance [*] projects to lead optimization.  This [*] will occur in [*] campaigns.  The [*] campaign will aggressively advance [*] into [*], with the aim of identifying compounds suitable for early-stage [*] within approximately [*] months, and Hits Identified by approximately [*] months after initiation of the collaboration.  If necessary, the [*] campaign will advance an [*] targets into [*] following the completion of the initial [*] campaign, and will subsequently derive compounds suitable for lead optimization approximately [*] months after initiation of the collaboration.

 

(b)                                  A Lead Optimization effort on Sunesis’ existing Raf Kinase inhibitor lead compounds to identify Development Candidates suitable for Non-Clinical Development.  It is anticipated that this work will result in the identification of [*] Candidates for Raf approximately [*] months after the collaboration is initiated.

 

After approximately [*] months, it is expected that the [*] campaign will have generated compounds from the [*] kinase targets that meet or exceed the [*].  Based on the attractiveness of the lead compounds and progress on subsequent targets, it is expected that [*] kinase target will advance into [*] project.

 

After approximately [*] months, it is expected that the [*] campaign will have generated compounds from the [*] kinase targets that meet the Hits Identified criteria.  Based on an evaluation of the [*], it is expected that an additional [*] project will be initiated.  Depending on resource availability, the [*] of this project may be [*] on completion of the Raf project.

 

A GANTT chart that outlines the major activities covering the different parts of this project is shown in Figure X. Due to the complexity of managing a portfolio of [*] and [*] projects to achieve the overall goals of the collaboration, the JRC will have final responsibility for decisions on [*] of targets, [*] of a full [*] effort and the balance of priorities and resources across the multiple projects that define this collaboration.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

69



 

Research Plan (Months 1-[*])

 

(a)                       Identification of [*] and [*] from [*] Kinase Targets

 

The goal of this work will be to screen [*] kinases using Sunesis proprietary Tethering SM fragment based approach and advance molecules on [*] kinase targets to the [*] stage.  The primary goal of the [*] Phase of the project will be to [*] against [*] kinase targets that will be advanced into [*] as efficiently as possible.  Due to the complexity of balancing multiple targets, the JRC will therefore play a key role in balancing both priorities and activities to enable the achievement of this goal.

 

Upon initiation of the collaboration, both Biogen Idec and Sunesis will jointly work to [*] and [*] kinases that will be selected and agreed on by both companies.  [*] suitable for [*] kinase [*] ([*] assays), [*] ([*]) and [*] will be [*] and[*]. For [*], a single [*] will be made, introducing a Cys residue adjacent to purine pocket, and removing other reactive surface Cys residue to meet [*] criteria, as defined in [*]. Depending on the [*] strategy, [*] (or [*]) active [*] of the kinase may also be generated. Based on an early assessment of both the [*] and [*] of these targets, the JRC will select [*] kinases to be aggressively advanced into the first [*] campaign.  It is anticipated that this [*] campaign will begin within approximately [*] months of initiation of the collaboration, dependent on the ease of [*].  In parallel with the [*] campaign, the [*] of the remaining [*] kinases will continue.  An additional [*] targets may also be selected for [*] at this time, if it is felt by the JRC that this will enhance the likelihood of establishing [*] for a second [*] campaign.   Based on the [*] and [*] of the remaining targets, the JRC will select [*] of these to initiate a [*] campaign.  It is anticipated that this campaign will begin following completion of the [*] campaign.

 

The Tethering SM with extenders approach, to identify [*] (See [*] for [*]), will be conducted by [*].  This work will initially involve the selection of purine pocket-binding fragments as extenders.  A combination of existing purine hits, [*] compounds and possibly [*] will be used to identify these fragments.   [*] fragments will be converted into extenders that will place a [*] towards the [*] of the kinase bounded by the [*] and the [*].  The selection of fragments for [*] will be supported by [*], [*] and [*] where appropriate. The criteria for [*] are outlined in [*].  [*] for each kinase will then be [*] against the [*] to identify [*]. It is anticipated that up to [*] will be conducted on each kinase.  As decided by the JPT and JRC, these [*] may involve a [*] of [*] and [*] (e.g. [*] vs. [*]) of the kinase, and will be [*] for each kinase based on the relevant [*] of the [*] in the target disease, and the likelihood of identifying [*].  Upon identification and confirmation of [*], [*] will be assembled as [*], comprising the [*] joined to the [*] by simple ([*] and [*]) [*] and [*] against the [*] in [*] assays.  Due to the rapid advancement to [*] with [*], it is anticipated that detailed [*] (e.g. [*]) and [*] will not be necessary at the [*], accelerating the time to [*] for [*]. We anticipate that it will take a [*] chemist effort for the [*] and [*] of [*] and the [*]

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

70



 

of [*] to the [*] stage.    To supplement [*], additional [*] may also be [*] and [*] to identify [*] against the [*] kinase targets.

 

A decision tree outlining the key activities and decision points for the [*] phase of the collaboration is outlined in Figure N.  Key milestones for progress will occur at the following points in each [*] campaign:

 

                  The [*] to advance into each [*] campaign

 

                  The [*] of [*] in the [*] of kinases.  (This event may trigger the addition of [*] from Biogen Idec)

 

                  The [*] of [*] with [*], and promising [*] properties for [*].

 

(b)                       [*] on Raf Kinase Inhibitors

 

The objective of this work is to progress Raf Kinase inhibitors to [*] a [*] that will be [*] to [*] ([*] to enable [*]).  A full [*] on the [*] and [*] already conducted at Sunesis to [*] Raf Kinase inhibitors will allow Biogen Idec and Sunesis to [*] for [*] on this target.  In general, it is assumed that [*] will involve an [*] team of approximately [*] who will work to improve the [*] (in [*] and [*]), [*] and other [*] of existing [*] to [*] a [*].  The advancement of compounds from [*] will be supported by a number of activities: (i) [*]: Sunesis has developed preliminary [*] and [*] for compound [*].  These and additional [*] (that may need to be [*]) will be used to [*] compounds in support of [*] of [*] and [*].   A [*] step of the joint project team will be to [*] and [*] the existing [*] and set plans for using these and other [*] to [*] the [*] of [*] (ii) [*] of compounds to determine and [*] and [*] for the compounds.  (iii) [*] to [*] to [*] for [*] the target [*] and [*] of [*].  This will involve the establishment and [*] of [*] for [*] of [*] of the Raf [*] in [*] and [*].  In addition,  [*], [*] and [*] will also be employed as needed to [*].

 

The [*] for this part of the project are (i) [*] and [*] of compounds that [*] the [*] milestone.  This milestone reflects the [*] of compounds with a [*] of [*] (in [*] and [*]) that also show [*] and [*] in [*].  (ii) [*] of compounds that meet the [*].  These compounds will meet the [*] for a target [*], including showing [*] by the [*] and [*] desired [*].  (iii) [*] selected.  This milestone reflects the [*] of the [*] that will be progressed into [*].

 

Both Sunesis and Biogen Idec will contribute resources to [*] for Raf.  Both companies will support [*], and [*] ([*] and [*]).  Biogen Idec will additionally provide the [*] for the [*] and [*] and subsequent [*] activities.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

71



 

Research Plan (Months [*] )

 

[*] on [*] Kinase Targets

 

When [*] or [*] of compounds from [*] that meet the [*] are discovered for a given target, then the project may be advanced into a [*] program.  The [*] efforts on the [*] from [*] will advance in a [*] to that of the Raf project, with [*] for both [*] and [*].

 

It is anticipated that [*] will be [*] for [*] kinase within [*] months of initiation of the project, prior to the completion of either the [*] activities on Raf or the [*] campaign.  It is anticipated that the [*] of [*] for [*] from targets in the [*] campaign will occur after approximately [*] months.  The JRC will decide the responsibility for resources to [*] on these kinases.  Increased [*] at Sunesis (from [*]) will also coincident with Sunesis’ involvement in [*] on a [*] kinase.

 

As with the Raf project, each kinase advanced into [*] will have a [*] of [*] milestones to track progress: (i) [*] of compounds that meet the [*] milestone.  This milestone reflects the [*] of compounds with a [*] of [*] that also show promising [*] and [*] in [*].  (ii) [*] of compounds that meet the [*] criteria.  These compounds will meet the [*] for a target profile, including showing [*] by the [*] and schedule desired [*].  (iii) [*] selected.  This milestone reflects the identification of the [*] that will be progressed into [*]. Since the Raf project will enter the collaboration at a [*] stage ([*] with some [*]) it is expected that the timelines for advancement of the [*] projects to the various milestones will be [*] months to achieve the [*] milestone for the [*] projects as opposed to the estimated [*] months for the Raf project.

 

The resource estimates for each phase of the project, along with the estimates and allocation of Sunesis resources is shown in Exhibit Y.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

72



 

EXHIBIT 1:  MILESTONE DEFINITIONS

 

Milestone Definitions

 

[*] Identified

[*]

                  [*] to tethering

                  Single Reactive [*] adjacent to [*]

                  Flies on [*]

                  [*] available

                  [*] has [*]

                  Equivalent to [*] in [*] analysis

                  Both [*] (or [*]) and [*] states may be desired for [*]

 

[*] Identified

Valid [*] that probe from [*] towards [*].

                  Reversible [*] modifies with [*]

                  [*] inhibits [*] as a [*] of [*] of [*]

                  Blocked by [*]

                  Shows [*] for [*]

                  [*] preferred

 

[*] Identified

                  Fragment MW [*]

                  Evidence of [*] in [*] mode (note: it may be quicker to [*] as [*], rather than to [*])

                  No obvious [*] in [*]

 

[*] Identified

[*]  (not [*]) compounds in [*] chemical series with [*] and properties that indicate clear opportunity for [*].  At least one of these searies should appear unprecedented.

Activity

                  [*] activity [*] with clear evidence of [*]

                  [*] activity [*] in mechanistic [*] assays

                  [*] selective vs. key [*] targets

                  [*] consistent over at least [*] activity

Physicochemical properties

                  [*]

                  [*]LogD [*]

                  Solubility [*]

                  in vitro assays (MDCK, Caco-2) show [*] to [*] permeability and no transporter activity

                  Stability in human plasma, liver microsomes [*]% after [*]

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

73



 

[*]

[*] compound series that will be [*] to [*] a [*].  Series should have optimization potential based on [*] and [*].

 

Biological activity

                  Biochemical IC50 [*]

                  SAR demonstrated over [*] of activity

                  [*]fold selective over close or undesirable kinases

                  Cell-based activity [*]

                  Consistent SAR between enzyme and cell activity

                  In vivo efficacy demonstrated: ED50 @ ROA [*]

 

Physicochemical properties

                  MW [*]

                  [*]LogD [*]

                  Solubility [*]

 

ADME/PK that support progression as a high quality drug candidate

In vitro ADME consistent with good drug-like characteristics

                  HLM Stability [*]% remaining at [*] minutes

                  Medium to good permeability ([*]) as measured in MDCK, CaCO-2, or comparable system

                  Stability in stimulated gastric and intestinal fluid (if PO dosing)

                  p450 inhibition [*]

                  No exclusive metabolism by major polymorphic p450 enzymes

                  Acceptable protein binding (generally [*]%)

                  PK profile shows generally good characteristics

                  Clearance below liver blood flow

                  T1/2 [*]

                  %F [*]% if PO dosing required/desired

 

[*] Candidate

A group of up to 5 compounds that will be [*] in [*] and [*] to [*] candidate

In vitro Biological activity

                  Cell-based activity [*]

                  Biochemical IC50[*]

                  [*]fold selective over close or undesirable kinases

                  [*] profiling shows no major flags ([*]% activity at [*])

Pharmacological properties consistent with TPP

                  p450 inhibition [*]

                  no major metabolism by polymorphic p450 enzymes

                  No activation of key p450 enzymes

                  In vitro metabolism verified and acceptable

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

74



 

                  Acceptable protein binding (generally [*]%)

                  [*] consistent with Drug Candidate

                  PK profile supports dosing by route and schedule required in clinic

                  F [*]% rat, if required to meet target profile

                  In vivo activity in suitable animal model(s) by desired route and schedule shows competitive efficacy for disease relative to key comparator molecules. (ED 50 [*])

                  [*] assessed and viable

                  Ames test, gene profiling negative, acute toxicity acceptable

                  Synthetic route evaluation (number of synthetic steps, scalability, cost of goods, etc.)

 

[*] Candidate

Compound that will be advanced into [*] studies.

[*] properties consistent with [*]

                  p450 inhibition [*]

                  no major metabolism by polymorphic p450 enzymes

                  No activation of key p450 enzymes

                  Acceptable protein binding (generally [*]%)

                  [*] consistent with Drug Candidate

                  [*] supports dosing by route and schedule required in clinic

                  [*] in suitable animal model(s) by desired route and schedule shows competitive efficacy for disease relative to key comparator molecules.

                  [*] studies show potential for acceptable therapeutic index

                  HERG channel inhibition [*]-fold above cell IC50

                  [*] in [*] studies if necessary

                  [*] in [*] studies is above optimal therapeutic dose

                  [*] models established if necessary for Phase I

[*]

                  Acceptable formulation for [*] and [*] studies using [*] components

                  [*] route established

                  [*] predicted to be reasonable given anticipated [*]

                  [*] is reasonably attainable if necessary

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

75



 

Figure N:  Decision tree for advancement of [*] of project

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

76


 

Figure X  GANTT Chart for Project

 

 

 

 

 

 

 

2004

 

 

 

2005

 

2006

 

2007

 

2008

 

ID

 

Task Name

 

Duration

 

Start

 

Qtr 2

 

Qtr  3

 

Qtr  4

 

Qtr 1

 

Qtr 2

 

Qtr 3

 

Qtr 4

 

Qtr 1

 

Qtr 2

 

Qtr 3

 

Qtr 4

 

Qtr 1

 

Qtr 2

 

Qtr 3

 

Qtr 4

 

Qtr 1

 

Qtr 2

 

Qtr 3

 

Qtr 4

 

1

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

2

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

3

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

4

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

5

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

6

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

7

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

8

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

9

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

10

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

11

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

12

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

13

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

14

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

15

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

16

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

17

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

18

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

19

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

20

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

21

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

22

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

23

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

24

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

25

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

26

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

27

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

28

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

29

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

30

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

31

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

32

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

33

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

34

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

35

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

36

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

37

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

38

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

39

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

40

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

41

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

42

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

43

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

44

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

45

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

46

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

47

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

48

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

49

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

50

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

51

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

52

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

53

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

54

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

55

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

56

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

57

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

58

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

59

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

77



 

Exhibit Y Project Resources

 

1.                Overall Project Resource Projections

 

 

 

2004

 

2005

 

2006

 

2007

 

2008

 

 

 

Q3

 

Q4

 

Q1

 

Q2

 

Q3

 

Q4

 

Q1

 

Q2

 

Q3

 

Q4

 

Q1

 

Q2

 

Q3

 

Q4

 

Q1

 

Q2

 

[*] project

 

 

 

 

 

 

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

Total

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*] Projects

 

 

 

 

 

 

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

Total

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*] Total

 

 

 

 

 

 

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

TOTAL

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

78



 

2.                Sunesis Resource Projections

 

 

 

2004

 

2005

 

2006

 

2007

 

2008

 

 

 

Q3

 

Q4

 

Q1

 

Q2

 

Q3

 

Q4

 

Q1

 

Q2

 

Q3

 

Q4

 

Q1

 

Q2

 

Q3

 

Q4

 

Q1

 

Q2

 

Sunesis [*]

 

 

 

 

 

 

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

TOTAL 

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

 

 

 

 

 

 

 

 

Sunesis [*]

 

 

 

 

 

 

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

 

 

 

 

TOTAL 

 

[*]

 

[*]

 

[*]

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

[*] Total

 

 

 

 

 

 

 

 

 

 

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

TOTAL 

 

[*]

 

[*]

 

[*]

 

[*]

 

[*]

 

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

79



 

Resource Assumptions

1.                [*] projects (Raf and [*] campaigns)

a.                Biogen Idec and Sunesis [*] for [*] of Raf ([*] etc)

                  Biogen Idec [*] and [*] for RAF

b.               Biogen Idec will assume [*] for [*] of [*] kinase project to [*] to [*]

c.                Sunesis will assume [*] for [*] kinase project to [*]

2.                [*] Projects

a.                Biogen Idec and Sunesis [*] and [*] for [*] kinases

b.               Sunesis will assume [*] for [*] to support [*] phase

c.                Sunesis will assume [*] for [*] screening.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

80



 

Execution Copy

 

EXHIBIT 2.5

 

Determination of the Availability of a Proposed Target

 

For the purposes of Sections 2.5 and 6.3, except as otherwise provided therein, a Target shall be deemed “Available” unless one or more of the following conditions is true as of the date the Party proposing such Target (the “Proposing Party”) first notifies the other Party (the “Other Party”) in writing of its request to determine whether such Target (the “Proposed Target”) is Available (which notice shall describe the purpose of the requested determination of Availability and reference the applicable Sections of the Agreement under which such request is being made).

 

1.                                        The Other Party has granted or is obligated to grant rights to a Third Party to sell one or more pharmaceutical products directed at the Proposed Target, or the Other Party is otherwise contractually restrained from granting to the Proposing Party rights to commercialize products directed to the Proposed Target;

 

2.                                        The Other Party is actively and in good faith engaged in negotiations with a Third Party regarding a transaction described in Section 1, provided that this Section 2 shall prevent a Proposed Target from being deemed “Available” only for such time as the Other Party is exercising reasonable diligence in such negotiations;

 

3.                                        The Other Party has performed research or development on its own behalf regarding the Proposed Target, and at the time of determination is exercising reasonable research, development or commercialization efforts with respect to the Proposed Target, either through an internal program or a bona fide collaboration with a Third Party; or

 

4.                                        The Other Party (i) has performed research or development on its own behalf regarding a Target other than the Proposed Target, and at the time of determination is exercising reasonable research, development or commercialization efforts with respect to such other Target, either through an internal program or a bona fide collaboration with a Third Party, and (ii) reasonably expects that compounds directed to such other Target may be Target Selective against the Proposed Target, or that selection of the Proposed Target will otherwise materially conflict with continuation of the Other Party’s research, development or commercialization activities directed to such other Target.

 

Notwithstanding the foregoing, the condition described in Section 4 shall not prevent a Proposed Target in the Target Selection Pool from being deemed “Available” to Biogen Idec, where (i) the time of determination under this Exhibit 2.5 is within [*] after the Effective Date, and (ii) the other Target regarding which Sunesis has performed research or development is a Target other than the [*] Kinase.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

81



 

Upon reasonable request from the Proposing Party for verification of non-Availability of a Proposed Target, the Other Party shall provide a general description of the events or conditions that give rise to such non-Availability, provided that the Other Party shall have the right to provide such materials to the Proposing Party or, in the Other Party’s sole discretion, an independent Third Party selected by the Other Party and approved by the Proposing Party, with such approval not to be unreasonably withheld or delayed and such disclosure subject to a reasonable confidentiality agreement between the Third Party and the Other Party.

 

Notwithstanding the foregoing, a condition described in any of Sections 1 through 4 above shall prevent a Proposed Target from being deemed “Available” only to the extent that the grant of rights or activities related to research, development or commercialization described therein (i) are based in substantial part on one or more Collaboration Compounds or Collaboration Patents, and (ii) are directed in substantial part to research, development or commercialization of small molecules that modulate the applicable Targets.

 

82



 

EXHIBIT 2.5.9

 

Collaboration Target Selectivity Parameters

 

[nothing selected to date]

 

83



 

Execution Copy

 

EXHIBIT 2.7.1

 

Phase II Drug Compounds

 

[no exceptions to date]

 



 

Execution Copy

EXHIBIT 3.5

 

Reverted Products

 

Section 1 Reversion of a Co-Funded Product to Sunesis .

 

1.1.                               Biogen Idec shall cooperate fully with Sunesis and shall provide Sunesis with all data, documentation, information and materials generated or used by Biogen Idec in the research, development, production or other exploitation of such Reverted Product, and Sunesis shall have the right to use and disclose such items.

 

1.2.                               To the extent not already terminated, the license granted to Biogen Idec under Section 6.2 shall terminate with respect to Collaboration Compounds incorporated in such Reverted Product.  Thereafter, such Collaboration Compounds shall be deemed Terminated Compounds for the purposes of Section 6.2.4.

 

1.3.                               All right, title and interest in and to (i) all regulatory filings related to the Reverted Product, including without limitation all INDs, NDAs and all information and correspondence related thereto, and (ii) any trademarks specific to the Reverted Product shall be transferred and assigned to Sunesis.

 

1.4.                               Biogen Idec shall cooperate fully with Sunesis upon Sunesis’ request to assign to Sunesis, or otherwise secure for Sunesis the benefits of, any arrangement between Biogen Idec and a Third Party related to the research, development, production or exploitation of such Reverted Product, including without limitation clinical research agreements, manufacturing and supply agreements and distribution agreements.  In the event that Reverted Products were manufactured by Biogen Idec, then Biogen Idec shall continue to provide Sunesis at fully loaded cost plus a 15% cost of capital charge with quantities of Reverted products reasonably ordered by Sunesis within twelve (12) months after the date of transition.

 

1.5.                               Without limiting the foregoing, Biogen Idec shall use reasonable efforts to implement the provisions of this Exhibit 3.5 and to ensure orderly transition and uninterrupted research and development of the Reverted Product.  Sunesis shall promptly reimburse Biogen Idec’s reasonable out-of-pocket costs with respect to activities, services and materials provided by Biogen Idec under Section 1 of this Exhibit 3.5.

 

Section 2 Termination of a Reverted Product and Reversion to Biogen Idec .

 

2.1                                  Sunesis shall cooperate fully with Biogen Idec and shall provide Biogen Idec with all data, documentation, information and materials generated or used by Sunesis in the research, development, production or other exploitation of such Reverted Product, and Biogen Idec shall have the right to use and disclose such items.

 

2.2                                  All right, title and interest in and to (i) all regulatory filings related to such Reverted Product, including without limitation all INDs, NDAs and all information and correspondence related thereto, and (ii) any trademarks specific to the Reverted Product shall be transferred and assigned to Biogen Idec.

 



 

2.3                                  Sunesis shall cooperate fully with Biogen Idec upon Biogen Idec’s request to assign to Biogen Idec, or otherwise secure for Biogen Idec the benefits of, any arrangement between Sunesis and a Third Party related to the research, development, production or exploitation of such Reverted Product, including without limitation clinical research agreements, manufacturing and supply agreements and distribution agreements.  In the event that such Reverted Product were manufactured by Sunesis, then Sunesis shall continue to provide Biogen Idec at fully loaded cost plus a 15% cost of capital charge with quantities of such Reverted Product reasonably ordered by Biogen Idec within twelve (12) months after the date of transition.

 

2.4                                  Without limiting the foregoing, Sunesis shall use reasonable efforts to implement the provisions of this Section 9.4 and to ensure orderly transition and uninterrupted research and development of such Reverted Product.  Biogen Idec shall promptly reimburse Sunesis’ reasonable out-of-pocket costs with respect to activities, services and materials provided by Sunesis under Section 2 of this Exhibit 3.5.

 

86



 

Execution Copy

 

EXHIBIT 7.2.2

 

Stock Purchase Agreement

 


EXECUTION COPY

 

SUNESIS PHARMACEUTICALS INCORPORATED

 

SERIES C-2 PREFERRED STOCK PURCHASE AGREEMENT

 

This Series C-2 Preferred Stock Purchase Agreement  (this “ Agreement ”) is entered into by and between Sunesis Pharmaceuticals Incorporated, a Delaware corporation (the “ Company ”) and Biogen Idec MA, a Massachusetts corporation (the “ Purchaser ”) as of August 30, 2004.

 

1.                Purchase and Sale of Preferred Stock .

 

1.1                                  The Company shall adopt and file with the Secretary of State of the State of Delaware on or before the Closing (as defined below) the Seventh Amended and Restated Certificate of Incorporation in the form attached hereto as Exhibit A (the “ Restated Certificate ”).

 

1.2                                  The Company has, or will have before the Closing, authorized the sale and issuance of up to 2,916,667 shares of the Company’s Series C-2 Preferred Stock (the “ Series C-2 Stock ”).  Upon the terms and subject to the conditions set forth in this Agreement, the Purchaser agrees to purchase at the Closing, and the Company agrees to sell and issue to the Purchaser at the Closing 2,916,667 shares of Series C-2 Stock at a purchase price of $4.80 per share.  The shares of Series C-2 Stock issued to the Purchaser pursuant to this Agreement shall be hereinafter referred to as the “ Shares .”

 

2.                Closing, Delivery .

 

2.1                                  The purchase and sale of the Shares shall take place at the offices of Latham & Watkins, 135 Commonwealth Drive, Menlo Park, California, at 10:00 a.m., on the date hereof, or at such other time and place as the parties shall agree upon (which time and place are designated as the “ Closing ”).

 

2.2                                  At the Closing of the sale of the Shares to the Purchaser, the Company will deliver to the Purchaser a certificate for 2,916,667 Shares in exchange for cash, a check or wire transfer in an amount equal to $14,000,000.

 

3.                The Company’s Representations and Warranties .  Except as set forth in the Schedule of Exceptions attached hereto as Exhibit B , the Company represents and warrants to the Purchaser as follows:

 

3.1                                  Organization and Standing; Restated Certificate and Bylaws .  The Company is a corporation duly organized and validly existing under, and by virtue of, the laws of the State of Delaware and is in good standing under such laws.  The Company has requisite corporate power and authority to own and operate its properties and assets, and to carry on its business as currently conducted and as proposed to be conducted.  The Company is qualified to do business as a foreign corporation in all jurisdictions in which the failure to be so qualified would have a material adverse affect on the Company’s business, financial condition or results of operations.

 

3.2                                  Corporate Power .  The Company will have at the Closing all requisite legal and corporate power and authority to execute and deliver this Agreement and the Eighth Amended and Restated Investor Rights Agreement set forth as Exhibit C hereto (the “ Investor

 

1



 

Rights Agreement ”), to sell and issue the Shares hereunder, to issue the Common Stock issuable upon conversion of the Series C-2 Stock and to carry out and perform its obligations under the terms of the Investor Rights Agreement.

 

3.3                                  Subsidiaries .  The Company has no subsidiaries or affiliated companies and does not otherwise own or control, directly or indirectly, any equity interest in any corporation, association or business entity.

 

3.4                                  Capitalization .  As of the Closing and immediately after giving effect to the sale of any of the Shares pursuant to the terms of this Agreement:

 

(a)                                   the authorized capital stock of the Company will consist of:

 

(A)                               48,916,667 shares of common stock, par value $0.0001 per share (the “ Common Stock ”), of which 5,763,835 shares will be issued and outstanding; 8,510,275 shares will be reserved for issuance upon the (1) conversion of outstanding shares of Series A Preferred Stock of the Company, par value $0.0001 per share (the “ Series A Stock ”) and (2) exercise and subsequent conversion of the outstanding warrants to acquire Series A Stock; 9,768,277 shares will be reserved for issuance upon the (1) conversion of outstanding shares of Series B Preferred Stock (the “ Series B Stock ”) and (2) exercise and subsequent conversion of the outstanding warrants to acquire Series B Stock; 12,991,185 shares will be reserved for issuance upon (1) the conversion of outstanding shares of Series C Preferred Stock (“ Series C Stock ”) and (2) exercise and subsequent conversion of warrants to acquire Series C Stock; 1,250,000 shares will be reserved for issuance upon the conversion of outstanding shares of Series C-1 Stock; 2,916,667 shares will be reserved for issuance upon the conversion of outstanding shares of Series C-2 Stock and 7,380,616 shares will be issuable upon the exercise of outstanding options and warrants to purchase Common Stock (“ Option Stock ”); and

 

(B)                                 36,698,667 shares of Preferred Stock, par value $0.0001 per share, consisting of (1) 8,682,000 shares designated as Series A Stock, of which 8,467,500 shares will be issued and outstanding and 42,755 shares will be reserved for issuance upon exercise of outstanding warrants to purchase Series A Stock (“ Series A Warrants ”), (2) 10,600,000 shares designated as Series B Stock, of which 9,690,771 shares will be issued and outstanding and 77,506 shares will be reserved for issuance upon exercise of outstanding warrants to purchase Series B Stock (“ Series B Warrants ”), (3) 13,250,000 shares designated as Series C Stock, of which 12,500,000 will be issued and outstanding and 491,185 shares reserved for issuance upon exercise of outstanding warrants to purchase Series C Stock (“ Series C Warrants ”), (4) 1,250,000 shares designated as Series C-1 Stock, all of which will be issued and outstanding and (5) 2,916,667 shares designated as Series C-2 Stock, all of which will be issued and outstanding.

 

(b)                                  all issued and outstanding shares of capital stock of the Company are duly authorized, validly issued, fully paid and nonassessable, have been, or, when issued and paid for in compliance with the provisions of this Agreement, will be issued in compliance with all federal and state securities laws, and were not, or will not be, issued in violation of or subject to any preemptive or similar rights; and

 

2



 

(c)                                   except as otherwise set forth in this Section 3.4 and the preemptive rights set forth in the Investor Rights Agreement, the Company will not have outstanding any stock or other securities convertible into or exchangeable for any shares of capital stock of the Company, any rights to subscribe for or to purchase or any options for the purchase of, or any agreements providing for the issuance (contingent or otherwise) of any capital stock, or any stock or securities convertible into or exchangeable for any capital stock of the Company other than the Series A Warrants, Series B Warrants, Series C Warrants and Option Stock.

 

3.5                                  Authorization; Binding Effect .  All corporate action on the part of the Company, its officers, directors and stockholders necessary for the authorization, execution, delivery and performance of this Agreement and the Investor Rights Agreement by the Company, the authorization, sale, issuance and delivery of the Shares and the performance of all of the Company’s obligations under this Agreement and the Investor Rights Agreement has been taken or will be taken prior to the Closing.  This Agreement and the Investor Rights Agreement, when executed and delivered by the Company, shall constitute valid and binding obligations of the Company, enforceable in accordance with their terms, except (i) as subject to laws of general application relating to bankruptcy, insolvency and the relief of debtors and rules of law governing specific performance, injunctive relief or other equitable remedies and (ii) to the extent the indemnification provisions in the Investor Rights Agreement may be limited by applicable federal or state securities laws.  The Shares are duly authorized and, when issued in compliance with the provisions of this Agreement, will be validly issued and will be fully paid and nonassessable.  The shares of Common Stock issuable upon conversion of the Series C-2 Stock in accordance with the Restated Certificate will be duly authorized, validly issued, fully paid and non-assessable.  The Series C-2 Stock will have the rights, preferences and privileges described in the Restated Certificate.  The Shares will be free of any liens or encumbrances other than any liens or encumbrances created by or imposed upon the holder; provided, however, that the Shares may be subject to restrictions on transfer under state and/or federal securities laws as set forth herein.

 

3.6                                  Labor Agreements and Actions .  The Company is not bound by or subject to (and none of its assets or properties is bound by or subject to) any written or oral, express or implied, contract, commitment or arrangement with any labor union, and no labor union has requested or, to the knowledge of the Company, has sought to represent any of the employees, representatives or agents of the Company.  There is no strike or other labor dispute involving the Company pending, or to the knowledge of the Company threatened, that could have a material adverse effect on the assets, properties, financial condition, operating results, or business of the Company, nor is the Company aware of any labor organization activity involving its employees.  The Company is not aware that any officer or key employee, or that any group of key employees, intends to terminate their employment with the Company, nor does the Company have a current intention to terminate the employment of any of the foregoing.  The employment by the Company of each officer, and each employee of the Company is not party to any employment agreement with the Company or, to the knowledge of the Company with any other person, and is terminable at the will of the Company.

 

3



 

3.7                                  Agreements; Action .

 

(a)                                   Except for agreements explicitly contemplated hereby, there are no agreements, understandings or proposed transactions between the Company and any of its officers, directors, or any affiliate thereof nor are there agreements or understandings between any person and/or entities, which affect or relate to the voting or giving of written consents with respect to any security or by a director of the Company.

 

(b)                                  There are no agreements, understandings, instruments, contracts, proposed transactions, judgments, orders, writs or decrees to which the Company is a party or by which it is bound which may involve (i) obligations (contingent or otherwise) of, or payments to the Company in excess of, $50,000, or (ii) the license of any patent, copyright, trade secret or other proprietary right to or from the Company or (iii) provisions restricting or affecting the development, manufacture or distribution of the Company’s products or services or (iv) indemnification by the Company with respect to infringements of proprietary rights.

 

(c)                                   The Company has not (i) declared or paid any dividends, or authorized or made any distribution upon or with respect to any class or series of its capital stock, (ii) made any loans or advances to any person, other than ordinary advances for travel expenses, or (iii) sold, exchanged or otherwise disposed of any of its assets or rights, other than the sale of its inventory in the ordinary course of business or (iv) incurred any indebtedness for money borrowed or incurred any other liabilities individually in excess of $50,000 or collectively in excess of $150,000.

 

(d)                                  For the purposes of subsections (b) and (c) above, all indebtedness, liabilities, agreements, understandings, instruments, contracts and proposed transactions involving the same person or entity (including persons or entities the Company has reason to believe are affiliated therewith) shall be aggregated for the purpose of meeting the individual minimum dollar amounts of such subsections.

 

(e)                                   The Company is not a party to and is not bound by any contract, agreement or instrument, or subject to any restriction under its Restated Certificate or Bylaws, that adversely affects its business as now conducted or as proposed to be conducted, its properties or its financial condition.

 

(f)                                     The Company has not engaged in the past three months in any discussion (i) with any representative of any corporation or corporations regarding the merger of the Company with or into any such corporation or corporations, (ii) with any representative of any corporation, partnership, association or other business entity or any individual regarding the sale, conveyance or disposition of all or substantially all of the assets of the Company or a transaction or series of related transactions in which more than fifty percent of the voting power of the Company would be disposed of, or (iii) regarding any other form of liquidation, dissolution or winding up of the Company.

 

3.8                                  Title .  The Company has good and marketable title to its properties and assets and has good title to all its leasehold interests, in each case subject to no mortgage, pledge, lien, lease, encumbrance or charge, other than (i) the lien of current taxes not yet due and payable and

 

4



 

(ii) liens and encumbrances which do not in any case materially detract from the value of the property subject thereto or materially impair the operations of the Company, and which have not arisen otherwise than in the ordinary course of business.

 

3.9                                  Compliance with Other Instruments .  The Company is not in violation or default of any term of its Restated Certificate or Bylaws, or of any term or provision of any material mortgage, indebtedness, indenture, contract, agreement, instrument, judgment, order or decree, and is not in violation of any statute, rule or regulation applicable to the Company where such violation would materially and adversely affect the Company.  The execution, delivery and performance of and compliance with the Agreement, and the issuance of the Shares, has not resulted and will not result in any material violation of, or conflict with, or constitute with or without the passage of time and the giving of notice a material violation or default under, the Company’s Restated Certificate or Bylaws or any of its agreements having a value in excess of $50,000, nor result in the creation of any mortgage, pledge, lien, encumbrance or charge upon any of the properties or assets of the Company.  To its knowledge, the Company has avoided every condition, and has not performed any act, the occurrence of which would result in the Company’s loss of any material right granted under any material license, distribution agreement or other agreement.

 

3.10                            Litigation .  There are no actions, suits, proceedings or investigations pending against the Company or its properties before any court or governmental agency (nor, to the Company’s knowledge, is there any reasonable basis therefor or threat thereof).  The foregoing includes, without limitation, actions pending or threatened (or any reasonable basis therefor known to the Company) involving the prior employment of any of the Company’s employees or consultants, their use in connection with the Company’s business of any information or techniques allegedly proprietary to any of their former employers or their obligations under any agreement with their former employers.  The Company is not a party or subject to the provisions of any order, writ, injunction, judgment or decree of any court or government agency or instrumentality.  There is no action, suit, proceeding or investigation by the Company currently pending or which the Company intends to initiate.

 

3.11                            Employees .  To the Company’s knowledge, no employee or consultant of the Company is in violation of any term of any employment contract, patent disclosure agreement or any other contract or agreement relating to the relationship of such employee with the Company or any other party because of the nature of the business conducted or to be conducted by the Company.

 

3.12                            Registration Rights; Voting Right .  Except as set forth in the Investor Rights Agreement, the Company is not under any contractual obligation to register any of its currently outstanding securities or any of its securities that may hereafter be issued.  To the Company’s knowledge, no stockholders of the Company have entered into any agreement with respect to the voting of capital shares.

 

3.13                            Governmental Consent, etc.   No consent, approval or authorization of or designation, declaration or filing with any governmental authority on the part of the Company is required in connection with the valid execution and delivery of this Agreement, or the offer, sale or issuance of the Shares, or the consummation of any other transaction contemplated hereby,

 

5



 

except (a) filing of the Restated Certificate in the office of the Delaware Secretary of State or (b) qualification (or taking such action as may be necessary to secure an exemption from qualification, if available) of the offer and sale of the Shares under the California Corporate Securities Law of 1968, as amended, and applicable Blue Sky laws, which filings and qualifications, if required, will be accomplished in a timely manner.

 

3.14                            Offering .  Subject to the accuracy of the Purchaser’s representations in Section 4 hereof, the offer, sale and issuance of the Shares to be issued in conformity with the terms of this Agreement and the issuance of the Common Stock to be issued upon conversion of the Series C-2 Stock constitute transactions exempt from the registration requirements of Section 5 of the Securities Act of 1933, as amended (the “ Securities Act ”), and in compliance with applicable state securities laws.

 

3.15                            Brokers or Finders; Other Offers .  The Company has not incurred, and will not incur, directly or indirectly, as a result of any action taken by the Company, any liability for brokerage or finders’ fees or agents’ commissions or any similar charges in connection with this Agreement.

 

3.16                            Patents and Trademarks .  The Company has sufficient title to and ownership of or rights to or is in the process of acquiring the rights to all patents, trademarks, service marks, trade names, copyrights, trade secrets, information, proprietary rights and processes necessary for its business as now conducted and, to its knowledge, as proposed to be conducted.  A true and complete list of such intellectual property is set forth on Schedule 3.16 hereto (the “ Company IP ”).  To the Company’s knowledge, the Company IP does not conflict with or infringe upon the rights of any other person or entity.  The Company has not entered into any options, licenses, sublicenses or entered into any agreements of any kind with respect to any of the intellectual property owned by, licensed to or otherwise controlled by the Company and has not encumbered the intellectual property of the Company in any way.  The Company has not received any communications alleging that the Company has violated or, by conducting its business as proposed, would violate any of the patents, trademarks, service marks, trade names, copyrights or trade secrets or other proprietary rights of any other person or entity.  The Company is not aware that any of its employees is obligated under any contract (including licenses, covenants or commitments of any nature) or other agreement, or subject to any judgment, decree or order of any court or administrative agency, that would interfere with the use of such employee’s best efforts to promote the interests of the Company or that would conflict with the Company’s business as now conducted or as proposed to be conducted.  Neither the execution nor delivery of this Agreement or the Investor Rights Agreement, nor the carrying on of the Company’s business by the employees of the Company, nor the conduct of the Company’s business as proposed, will, to the Company’s knowledge, conflict with or result in a breach of the terms, conditions or provisions of, or constitute a default under, any contract, covenant or instrument under which any of such employees are now obligated.  The Company does not believe it will be necessary to utilize any inventions of any of the Company’s employees (or people it currently intends to hire) made prior to their employment by the Company which are not currently licensed to or owned by the Company.

 

3.17                            Obligations to Related Parties .  There are no obligations of the Company to officers, directors, stockholders or employees of the Company other than (a) for payment of

 

6



 

salary for services rendered, (b) reimbursement for reasonable expenses incurred on behalf of the Company and (c) for other standard employee benefits made generally available to employees.  None of the officers, directors or stockholders of the Company, or any members of their immediate families, are indebted to the Company (other than in connection with purchases of the Company’s stock) or have any direct or indirect ownership interest in any firm or corporation with which the Company is affiliated or with which the Company has a business relationship, or any firm or corporation which competes with the Company, except that officers, directors and/or stockholders of the Company may own stock in publicly traded companies which may compete with the Company.  No officer, director or stockholder, or to the Company’s knowledge any member of their immediate families, is, directly or indirectly, interested in any material contract with the Company (other than such contracts as relate to any such person’s ownership of capital stock or other securities of the Company).  The Company is not a guarantor or indemnitor of any indebtedness of any other person, firm or corporation.

 

3.18                            Disclosure .  This Agreement and the Investor Rights Agreement and all other certificates and documents delivered in connection herewith, when taken as a whole, do not contain any untrue statement of a material fact or omit to state a material fact necessary in order to make the statements contained herein not misleading in light of the circumstances under which they were made.  The Company has provided the Purchaser with all the information the Purchaser has requested for deciding whether to purchase the Shares.

 

3.19                            Employee Benefit Plans .  The Company does not have any Employee Benefit Plan as defined in the Employee Retirement Income Security Act of 1974.

 

3.20                            Taxes .  (a) The Company has paid all federal, state, county, local, foreign and other taxes, including, without limitation, income taxes, estimated taxes, excise taxes, sales taxes, use taxes, gross receipts taxes, franchise taxes, employment and payroll related taxes, property taxes and import duties, whether or not measured in whole or in part by net income (hereinafter, “ Taxes ” or, individually, a “ Tax ”) which have come due and are required to be paid by it through the date hereof, and all deficiencies or other additions to Tax interest and penalties award by it in connection with any such Taxes, other than Taxes being disputed by the Company in good faith for which adequate reserves have been made in accordance with United States generally accepted accounting principles (“ GAAP ”); (b) the Company has timely filed or caused to be filed all returns for Taxes that it is required to file on and through the date hereof (including all applicable extensions), and all such Tax returns are accurate and complete in all material respects, (c) with respect to all Tax returns of the Company, (i) there is no unassessed Tax deficiency proposed or, to the knowledge of the Company, threatened against the Company and (ii) no audit is in progress with respect to any return for Taxes, no extension of time is in force with respect to any date on which any return for Taxes was or is to be filed and no waiver or agreement is in force for the extension of time for the assessment or payment of any Tax; (d) all provisions for Tax liabilities of the Company with respect to the Financial Statements (as defined below) have been made in accordance with GAAP consistently applied, and all liabilities for Taxes of the Company attributable to periods prior to or ending on the date hereof have been adequately provided for on the Financial Statements; and (e) there are no liens for Taxes on the assets of the Company.

 

7



 

3.21                            Proprietary Information and Inventions Agreements .  Each employee, consultant and officer of the Company has executed an agreement with the Company regarding confidentiality and proprietary information substantially in the form or forms made available to the Purchaser.  The Company, after reasonable investigation, is not aware that any of its employees or consultants is in violation thereof, and the Company will use its reasonable best efforts to prevent any such violation.  All consultants to or vendors of the Company with access to confidential information of the Company are parties to a written agreement substantially in the form or forms made available to the Purchaser, under which, among other things, each such consultant or vendor is obligated to maintain the confidentiality of confidential information of the Company.  The Company is not aware that any of its consultants or vendors is in violation thereof, and the Company will use its reasonable best efforts to prevent any such violation.

 

3.22                            Permits The Company has all franchises, permits, licenses and any similar authority necessary for the conduct of its business as now being conducted by it, the lack of which could materially and adversely affect the business, properties, prospects, or financial condition of the Company and believes, after reasonable investigation, that it can obtain, without undue burden or expense, any similar authority for the conduct of its business as planned to be conducted.  The Company is not in default in any material respect under any of such franchises, permits, licenses or other similar authority.

 

3.23                            Corporate Documents .  The Restated Certificate and Bylaws of the Company are in the form made available to the Purchaser.  The copy of the minute books of the Company made available to the Purchaser, contains minutes of all meetings of directors and stockholders and all actions by written consent without a meeting by the directors and stockholders since the date of incorporation and reflects all actions by the directors (and any committee of directors) and stockholders with respect to all transactions referred to in such minutes accurately in all material respects.

 

3.24                            Real Property Holding Corporation .  The Company is not a United States real property holding corporation within the meaning of the Internal Revenue Code Section 897(c)(2) and any regulations promulgated thereunder.

 

3.25                            Insurance .  The Company maintains with financially sound and reputable insurers, insurance with respect to its properties and business against such casualties and contingencies, of such types (including, without limitation, errors and omissions coverage), on such terms and in such amounts (including deductibles, co-insurance and self-insurance, if adequate reserves are maintained with respect thereto) as are customary in the case of similarly situated entities engaged in a similar business.

 

3.26                            Financial Statements .  The Company has made available to the Purchaser its audited financial statements (including balance sheet, income statement and statement of cash flows) for the years ended December 31, 2003 and December 31, 2002 and its unaudited financial statements (including balance sheet, income statement and statement of cash flows) for the interim period ended June 30, 2004 (collectively, the “ Financial Statements ”).  The Financial Statements have been prepared in accordance with generally accepted accounting principles applied on a consistent basis throughout the periods indicated, except that the Financial Statements may not contain all footnotes required by generally accepted accounting principles.

 

8



 

The Financial Statements fairly present the financial condition and operating results of the Company as of the dates, and for the periods, indicated therein, subject to normal year-end audit adjustments.  Except as set forth in the Financial Statements, the Company has no material liabilities, contingent or otherwise, other than (i) liabilities incurred in the ordinary course of business subsequent to June 30, 2004 and (ii) obligations under contracts and commitments incurred in the ordinary course of business and not required under generally accepted accounting principles to be reflected in the Financial Statements, which, in both cases, individually or in the aggregate are not material to the financial condition or operating results of the Company.

 

3.27                            Investment Company .  The Company is not and is not controlled by or affiliated with an “investment company” within the meaning of the Investment Company Act of 1940, as amended.

 

4.                Representation and Warranties of the Purchaser .  The Purchaser represents and warrants to the Company as follows:

 

4.1                                  This Agreement and the Investor Rights Agreement each constitute the Purchaser’s valid and legally binding obligation, enforceable in accordance with its terms.

 

4.2                                  The Purchaser is purchasing the Shares for its own account for investment purposes only and not with a view to, or for resale in connection with, any “distribution” thereof for purposes of the Securities Act of 1933, as amended (the “ Securities Act ”).  The Purchaser understands that the Shares have not been registered under the Securities Act or any applicable state securities laws by reason of a specific exemption therefrom that depends upon, among other things, the bona fide nature of the investment intent as expressed herein.

 

4.3                                  The Purchaser has discussed the Company and its plans, operations and financial condition with the Company’s officers and has received all such information as the Purchaser deems necessary and appropriate to enable it to evaluate the financial risk inherent in making an investment in the Shares.  The Purchaser has received satisfactory and complete information concerning the business and financial condition of the Company in response to the Purchaser’s inquiries.

 

4.4                                  The Purchaser realizes that the purchase of the Shares will be a highly speculative investment.  The Purchaser is able, without impairing the Purchaser’s financial condition, to hold the Shares for an indefinite period of time and to suffer a complete loss of the Purchaser’s investment.  The Purchaser recognizes that the Company has only recently been organized and that it has a limited financial and operating history and the investment in the Company involves substantial risks.  The Purchaser understands all of the risks related to the purchase of the Shares.  By virtue of the Purchaser’s experience in evaluating and investing in private placement transactions of securities in companies similar to the Company, the Purchaser is capable of evaluating the merits and risks of the Purchaser’s investment in the Company and has the capacity to protect the Purchaser’s own interests.

 

4.5                                  The Purchaser understands that the Shares must be held indefinitely unless subsequently registered under the Securities Act or unless an exemption from registration is otherwise available.  Moreover, the Purchaser understands that the Company is under no

 

9



 

obligation to register the Shares except as otherwise provided in the Investor Rights Agreement.  The Purchaser is aware of Rule 144 promulgated under the Securities Act, which permits limited resale of securities purchased in a private placement subject to the satisfaction of certain conditions.  The Purchaser understands that the Shares will be imprinted with a legend that prohibits the transfer of the Shares unless they are registered or such registration is not required in the opinion of counsel reasonably satisfactory to the Company.

 

4.6                                  The Purchaser represents that it is an “accredited investor” as such term is defined in Rule 501(a) of Regulation D promulgated under the Securities Act.

 

4.7                                  The Purchaser understands that the proceeds of this financing will not be sufficient to carry the Company to the point of profitability.

 

4.8                                  The Purchaser understands that while management forecasts, if any, were made in good faith, such forecasts may be inaccurate and operating results could differ dramatically and materially from the results forecast by management.

 

5.                Conditions to Closing of the Purchaser .  The Purchaser’s obligations to purchase the Shares at the Closing are, at the option of the Purchaser, subject to the fulfillment of the following conditions:

 

5.1                                  Representations and Warranties Correct .  The representations and warranties made by the Company in Section 3 hereof shall be true and correct in all material respects as of the Closing, provided that with respect to any representation or warranty that is qualified as to materiality, the applicable materiality standard applied shall not be increased by virtue of the materiality reference contained in this Section 5.1.

 

5.2                                  Performance; Compliance Certificate .  The Company shall have performed and complied with all covenants, agreements, obligations and conditions that are required to be performed or complied with by it on or before the Closing.  The Company shall have delivered to the Purchaser a certificate of the Company executed by the President of the Company, dated as of the date of the Closing certifying to the fulfillment of the conditions specified in Sections 5.1 and 5.2 of this Agreement.

 

5.3                                  Blue Sky .  The Company shall have obtained all necessary Blue Sky law and other permits and qualifications, or have the availability of exemptions therefrom, required by any state for the offer and sale of the Shares.

 

5.4                                  Restated Certificate .  The Restated Certificate shall have been filed with the Delaware Secretary of State and the Purchaser shall have received reasonably satisfactory evidence thereof.

 

5.5                                  Investor Rights Agreement .  The Company, the Purchaser and the other parties thereto shall have executed and delivered the Investor Rights Agreement.

 

5.6                                  Opinion of Company Counsel .  The Purchaser shall have received from Latham & Watkins, counsel for the Company, an opinion dated as of the Closing, in substantially the form of Exhibit D .

 

10



 

5.7                                  No Injunction, Etc.   No order to restrain, enjoin or otherwise prevent the consummation of this Agreement of the transactions contemplated hereby shall have been entered by any court or administrative body.

 

5.8                                  Qualifications .  All authorizations, approvals, or permits, if any, of any governmental authority or regulatory body of the United States or of any state that are required in connection with the lawful issuance and sale of the Series C-2 Stock pursuant to this Agreement shall be duly obtained and effective as of the Closing.

 

5.9                                  Collaboration Agreement .  The Company and the Purchaser shall have executed and delivered the Collaboration Agreement in substantially the form attached hereto as Exhibit E .

 

6.                Conditions to Closing of the Company .  The Company’s obligations to issue and sell the Shares at the Closing are, at the option of the Company, subject to the fulfillment of the following conditions:

 

6.1                                  Representations and Warranties Correct .  The representations and warranties made by the Purchaser in Section 4 hereof shall be true and correct in all material respects as of the Closing, provided that with respect to any representation or warranty that is qualified as to materiality, the applicable materiality standard applied shall not be increased by virtue of the materiality reference contained in this Section 6.1.

 

6.2                                  Performance; Compliance Certificate .  The Purchaser shall have performed and complied with all covenants, agreements, obligations and conditions that are required to be performed or complied with by it on or before the Closing.  The Purchaser shall have delivered to the Company a certificate of the Purchaser executed by the President of the Purchaser, dated as of the date of the Closing certifying to the fulfillment of the conditions specified in Sections 6.1 and 6.2 of this Agreement.

 

6.3                                  Blue Sky .  The Company shall have obtained all necessary Blue Sky law and other permits and qualifications, or have the availability of exemptions therefrom, required by any state for the offer and sale of the Shares.

 

6.4                                  Restated Certificate .  The Restated Certificate shall have been filed with the Delaware Secretary of State.

 

6.5                                  Investor Rights Agreement .  The Company, the Purchaser and the other parties thereto shall have executed and delivered the Investor Rights Agreement.

 

6.6                                  No Injunction, Etc.   No order to restrain, enjoin or otherwise prevent the consummation of this Agreement of the transactions contemplated hereby shall have been entered by any court or administrative body.

 

6.7                                  Qualifications .  All authorizations, approvals, or permits, if any, of any governmental authority or regulatory body of the United States or of any state that are required in connection with the lawful issuance and sale of the Series C-2 Stock pursuant to this Agreement shall be duly obtained and effective as of the Closing.

 

11



 

6.8                                  Collaboration Agreement .  The Company and the Purchaser shall have executed and delivered the Collaboration Agreement in substantially the form attached hereto as Exhibit E .

 

7.                Miscellaneous .

 

7.1                                  Governing Law .  This Agreement and all acts and transactions pursuant hereto and the rights and obligations of the parties hereto shall be governed, construed and interpreted in accordance with the laws of the State of California, without giving effect to its principles of conflicts of law or choice of law.

 

7.2                                  Survival .  The representations and warranties contained herein shall survive the execution and delivery of this Agreement and the sale of the Shares.

 

7.3                                  Successors and Assigns .  The terms and conditions of this Agreement shall inure to the benefit of and be binding upon the respective successors and assigns of the parties as are permitted by this Agreement.  Nothing in this Agreement, express or implied, is intended to confer upon any party other than the parties hereto or their respective successors and permitted assigns any rights, remedies, obligations, or liabilities under or by reason of this Agreement, except as expressly provided in this Agreement.

 

7.4                                  Entire Agreement .  This Agreement and the Investor Rights Agreement embody the entire understanding and agreement between the Purchaser and the Company and supersede all prior agreements and understandings relating to the subject matter hereof.

 

7.5                                  Counterparts .  This Agreement may be executed in any number of counterparts and signatures and may be delivered by facsimile, each of which shall be enforceable against the parties actually executing such counterparts, and all of which together shall constitute one instrument.

 

7.6                                  Expenses .  The Company and the Purchaser shall each bear their own legal and other expenses in connection with the transactions contemplated hereby.

 

7.7                                  Notices, etc.   All notices and other communications required or permitted hereunder shall be effective upon receipt and shall be in writing and may be delivered in person, by telecopy, electronic mail, overnight delivery service or U.S. mail, addressed (a) if to the Purchaser, at its address set forth on the signature page of this Agreement, or at such other address as the Purchaser shall have furnished the Company in writing, or (b) if to the Company, at the address of its principal office, or at such other address as the Company shall have furnished to the Purchaser in writing.

 

7.8                                  California Corporate Securities Law .  THE SALE OF THE SECURITIES WHICH ARE THE SUBJECT OF THIS AGREEMENT HAS NOT BEEN QUALIFIED WITH THE COMMISSIONER OF CORPORATIONS OF THE STATE OF CALIFORNIA AND THE ISSUANCE OF SUCH SECURITIES OR THE PAYMENT OR RECEIPT OF ANY PART OF THE CONSIDERATION THEREFOR PRIOR TO SUCH QUALIFICATION IS UNLAWFUL, UNLESS THE SALE OF SECURITIES IS EXEMPT FROM THE QUALIFICATION BY SECTION 25100, 25102, OR 25105 OF THE CALIFORNIA CORPORATIONS CODE.  THE

 

12



 

RIGHTS OF ALL PARTIES TO THIS AGREEMENT ARE EXPRESSLY CONDITIONED UPON SUCH QUALIFICATION BEING OBTAINED UNLESS THE SALE IS SO EXEMPT.

 

7.9                                  Titles and Subtitles .  The titles of the paragraphs and subparagraphs of this Agreement are for convenience of reference only and are not to be considered in construing this Agreement.

 

7.10                            Amendments and Waivers .  Any term of this Agreement may be amended or waived (either generally or in a particular instance and either retroactively or prospectively) only with the written consent of the Company and the holders of at least a majority of the Common Stock issued or issuable upon conversion of the Shares.  Any amendment or waiver effected in accordance with this Section 7.10 shall be binding upon the Purchaser and each transferee of the Shares (or the Common Stock issuable upon conversion thereof), each future holder of all such securities, and the Company.

 

7.11                            Severability .  If one or more provisions of this Agreement are held to be unenforceable under applicable law, the parties agree to renegotiate such provision in good faith.  In the event that the parties cannot reach a mutually agreeable and enforceable replacement for such provision, then (a) such provision shall be excluded from this Agreement, (b) the balance of the Agreement shall be interpreted as if such provision were so excluded and (c) the balance of the Agreement shall be enforceable in accordance with its terms.

 

7.12                            Confidentiality .  The Company and the Purchaser agree that, except with the prior written permission of the applicable party, it shall at all times keep confidential and not divulge, furnish or make accessible to anyone any confidential information, knowledge or data concerning or relating to the business or financial affairs of the other party to which such party has been or shall become privy by reason of this Agreement, discussions or negotiations relating to this Agreement, the performance of its obligations hereunder or the ownership of Shares purchased hereunder.  The provisions of this Section 7.12 shall be in addition to, and not in substitution for, the provisions of any separate nondisclosure agreement executed by the parties hereto with respect to the transactions contemplated hereby.

 

( Signature Page Follows )

 

13



 

The parties have executed this Series C-2 Preferred Stock Purchase Agreement as of the date first written above.

 

 

COMPANY:

PURCHASER:

 

 

 

 

 

 

 

SUNESIS PHARMECEUTICALS

BIOGEN IDEC MA

 

INCORPORATED

 

 

 

 

 

/s/ Daniel N Swisher Jr.

 

/s/ Mark Wiggins

 

Name:

Daniel N Swisher Jr.

 

Name:

Mark Wiggins

 

Title:

Chief Executive Officer

 

Title:

EVP Business Development

 

Address:

341 Oyster Point Blvd.

 

Address:

14 Cambridge Center

 

 

South San Francisco, CA 94080

 

 

Cambridge, MA 02142

 

Fax:

(650) 266-3501

 

 

 

 

 

 

SIGNATURE PAGE TO PURCHASE AGREEMENT

 



 

EXHIBITS

 

Exhibit A -

 

Form of Seventh Amended and Restated Certificate of Incorporation

 

 

 

Exhibit B -

 

Schedule of Exceptions to Representations and Warranties

 

 

 

Exhibit C -

 

Form of Eighth Amended and Restated Investor Rights Agreement

 

 

 

Exhibit D -

 

Form of Legal Opinion of Latham & Watkins LLP

 

 

 

Exhibit E -

 

Form of Collaboration Agreement

 




Exhibit 10.33

 

THIRD AMENDMENT TO COLLABORATION AGREEMENT

 

This Third Amendment to Collaboration Agreement (“Amendment”), entered into and effective as of December 22, 2004 (the “Effective Date”), is between Sunesis Pharmaceuticals, Inc., a Delaware Corporation having a principal place of business at 341 Oyster Point Boulevard, South San Francisco, California 94080 (“Sunesis”), and Johnson & Johnson Pharmaceutical Research & Development, L.L.C., a New Jersey limited liability company having a place of business at 920 U.S. Route 202, Raritan, New Jersey 08869 (“JJPRD”). Sunesis and JJPRD may be referred to individually herein as a “Party” or together as the “Parties”.

 

RECITALS

 

WHEREAS, Sunesis and JJPRD entered into a Collaboration Agreement dated May 3, 2002 (the “Collaboration Agreement”), as supplemented by a letter agreement dated May 2, 2002, and as amended by an Amendment to Collaboration Agreement dated December 15, 2002, and a Notice of Extension and Second Amendment to Collaboration Agreement dated December 15, 2003 (taken together, the “Collaboration Agreement”); and

 

WHEREAS, JJPRD has notified Sunesis that it wishes to further extend the term of the Research Program under the Collaboration Agreement, and Sunesis and JJPRD desire to make further modifications to the Collaboration Agreement for the purpose of specifying the funding to be paid by JJPRD to Sunesis to support the extended research and permitting public disclosure of the target of the collaborative research;

 

NOW, THEREFORE, in consideration of the mutual covenants set forth in this Amendment, Sunesis and JJPRD hereby agree as follows:

 

1.             Capitalized terms used in this Amendment and not otherwise defined herein shall have the meanings ascribed to such terms in the Collaboration Agreement.

 

2.             Pursuant to Section 2.4 of the Collaboration Agreement, JJPRD has opted to extend the Research Term for eight (8) additional months. Accordingly, the Parties agree to extend the Research Term from May 3, 2005 through December 31, 2005 (the “Second Extension”). Sunesis agrees to provide, and JJPRD agrees to fund, [*] ([*]) FTEs to conduct activities in the Research Program during the Second Extension of the Research Term.

 

3.             In consideration of the provision of FTEs for the Second Extension, JJPRD agrees to pay Sunesis research funding at the FTE Rate of [*] dollars ([*]) per FTE per year. Accordingly, JJPRD shall pay Sunesis a total of [*] US dollars (i.e., $[*]/FTE/year x (8/12 year) x [*] FTEs = $[*]) as funding for the Research Program during the Second Extension. Such funding shall be due in installments quarterly in advance of each quarter of the extended Research Term and payable within forty-five (45) days of JJPRD’s receipt of a written invoice therefor as provided for in Section 5.1.2 of the Collaboration Agreement. All invoices shall in essential respects be in the form provided at Exhibit A.

 

4.             Pursuant to Section 3.4 of the Collaboration Agreement, the JRC shall promptly decide how to allocate the FTEs to the work to be performed by Sunesis during the Second Extension of the Research Term and shall modify the Research Plan accordingly.


Confidential treatment has been requested for portions of this exhibit.  The copy filed herewith omits the information subject to the confidentiality request.  Omissions are designated as [*].  A complete version of this exhibit has been filed separately with the Securities and Exchange Commission.

 

 



 

5.             Subject to the conditions of Sections 9.3 and 9.4 of the Collaboration Agreement with respect to public disclosures and publications, JJPRD and Sunesis agree that either party may disclose to third parties the target of the collaboration as being Cathepsin S.

 

6.             Except to the extent modified or amended herein, all other terms and conditions of the Collaboration Agreement shall remain in full force and effect.

 

[The rest of this page is intentionally left blank. ]

 

 

 



 

IN WITNESS WHEREOF, the undersigned have duly executed and delivered this Amendment as a sealed instrument effective as of the date first above written.

 

SUNESIS PHARMACEUTICALS, INC.

 

 

By:

/s/ Daniel N. Swisher

 

 

 

 

Name:

Daniel N. Swisher

 

 

 

 

Title:

CEO

 

 

 

 

 

JOHNSON & JOHNSON PHARMACEUTICAL

RESEARCH & DEVELOPMENT, L.L.C.

 

 

By:

/s/ Michael R. Jackson

 

 

 

 

Name:

Michael R. Jackson

 

 

 

 

Title:

President ALZA

 

 

 

 

 



 

Exhibit A

 

Form of Invoice

 

Sunesis TAX ID #

 

To:

 

Donna Uranowski, La Jolla Site Administrator

Johnson & Johnson Pharmaceutical Research & Development, L.L.C.

3210 Merryfield Row

San Diego, CA 92121

(Tel+ 1-858-450-2060)

 

Terms: Net 45 days                      PO#                             

 

Amount of payment due:                                   dollars ($                                          )

 

Payment for: quarterly installment due according to COLLABORATION AGREEMENT between Sunesis Pharmaceuticals, Inc. and Johnson & Johnson Pharmaceutical Research & Development, L.L.C., dated May 3, 2002 (as amended), in support of FTEs for the quarter of the Research Term running from                       until                                                                                                                 .

 

Bill to:

 

Johnson & Johnson Pharmaceutical Research & Development, L.L.C.

 

Remit to:

 

Sunesis Pharmaceuticals, Inc.

_______________________

_______________________

 


 



EXHIBIT 10.36

 

LICENSE AGREEMENT

 

(AG-7352)

 

This LICENSE AGREEMENT made and entered into as of the       day of              , 2003 by and between Dainippon Pharmaceutical Co., Ltd., existing under the laws of Japan and having its principal place of business at 6-8, Doshomachi 2-chome, Chuo-ku, Osaka, 541-0045 Japan (hereinafter referred to as “Dainippon”) and Sunesis Pharmaceuticals Inc., incorporated under the laws of the State of Delaware, the United States of America and having its principal place of business at 341 Oyster Point Boulevard, South San Francisco, California 94080, the United States of America (hereinafter referred to as “Sunesis”)

 

WITNESSETH:

 

WHEREAS, Dainippon has long been engaged in research on and development of pharmaceuticals and has made extensive efforts in search, screening and invention of new medical substances in important therapeutic fields, and as a result, Dainippon has found a certain valuable compound; and

 

WHEREAS, Sunesis is interested in evaluating the compound, and Dainippon and Sunesis concluded the confidentiality agreement dated January 17, 2003 (hereinafter referred to as “Confidentiality Agreement”) and the material transfer agreement dated February 26, 2003 (hereinafter referred to as “Material Transfer Agreement”) for Sunesis’ evaluation of the compound; and

 

WHEREAS, as a result of Sunesis’ evaluation, Sunesis proposed, and Dainippon accepted, that Sunesis would carry out further evaluation of the Compound, and Dainippon and Sunesis concluded the option agreement dated May 23, 2003 (hereinafter referred to as “Option Agreement”), under which Dainippon granted Sunesis an exclusive option to conclude a license agreement covering the Compounds and the Products (as defined below); and

 

WHEREAS, Sunesis exercised the option on (Date), 2003 under the Option Agreement, and Dainippon and Sunesis intend to enter into the license agreement.

 

NOW, THEREFORE, in consideration of the above premises and the agreement herein contained, the parties agree as follows:

 

Article 1.         Definition

 

1.01          The terms defined herein shall have the meaning set forth herein when they are used in this Agreement.  As used in this Agreement, the singular includes the plural, and the plural includes the singular, wherever so required by fact or context.  Titles used in the Articles hereof shall be only for the sake of convenience and shall not be regarded as a part of this Agreement.

 

1.02          The term “Primary Compound” shall mean a compound identified as (+)-1,4-dihydro-7-[(3S,4S)-3-methoxy-4-(methylamino)-1-pyrrolidinyl]-4-oxo-1-(2-thiazolyl)-1,8-naphthyridine-3-carboxylic acid which is specified by Dainippon as AG-7352.

 


Confidential treatment has been requested for portions of this exhibit.  The copy filed herewith omits the information subject to the confidentiality request.  Omissions are designated as [*].  A complete version of this exhibit has been filed separately with the Securities and Exchange Commission.

 



 

1.03          The term “Compounds” shall mean the Primary Compound, and other compounds covered by protection of the patents or claim of the patent applications included in the Patent Rights as set forth in Schedule 1.17 attached hereto.

 

1.04          The term “Products” shall mean products containing the Compound(s) as active ingredient(s) ready for sale to customers, in finished, final packaged form as pharmaceuticals for use in humans.

 

1.05          The term “Information and Know-How” shall mean data, know-how, and information relating to the Compounds and/or the Products in existence as of the date of execution of this Agreement and owned or controlled by Dainippon, which is listed on Schedule B of the Option Agreement or otherwise provided to Sunesis pursuant to the Option Agreement or this Agreement, including Section 4.03, and which includes the Manufacturing Know-How.

 

1.06          The term “Territory” shall mean the entire world.

 

1.07          The term “Affiliate” shall mean any company or organization directly or indirectly owning, owned by or under common ownership with the subject entity in question.  For purposes of this definition only, a company shall “own” another entity only if it owns or controls fifty percent (50%) or more of the voting ownership interest of the subject entity.

 

1.08          The term “Effective Date” shall mean the date first set forth above.

 

1.09          The term “Test” shall mean any and all preclinical, non-clinical and clinical tests or trials for the Compounds and/or the Products performed by Sunesis, its Affiliate(s) and/or the Sublicensee(s) that are necessary or useful for securing and/or maintaining the Regulatory Approval in the Territory.

 

1.10          The term “Phase II Clinical Study” shall mean a study of a Product in human patients for which the primary endpoint is a preliminary determination of efficacy in patients being studied (for example, as described in 21 C.F.R. §312.21(b), or similar clinical study in a country other than the United States of America).  A first-in-human study or any study for which a primary endpoint is directed to safety shall not be considered a Phase II Clinical Study.

 

1.11          The term “Phase III Clinical Study” shall mean large scale pivotal human clinical trials of a Product, which is designed and sufficiently powered to establish safety and efficacy of one or more particular doses in patients being studied and to provide the statistical basis for the Marketing Approval for the respective drug (for example, as described in 21 C.F.R. § 312.21(c), or similar clinical study in a country other than the United States of America).

 

1.12          The term “FDA” shall mean the United States Food and Drug Administration and any successor agency thereof.

 

1.13          The term “Regulatory Body” shall mean, as the fact or context of this Agreement requires, the FDA and any or all equivalent governmental

2



 

authorities outside the United States of America, authorized to permit any Test in the Territory and whose approval is required for manufacture, marketing, promotion, sale or distribution of the Products in the Territory.

 

1.14          The term “IND” shall mean an Investigational New Drug Application filed with the FDA or an equivalent filing with a Regulatory Body in the Territory.

 

1.15          The term “NDA” shall mean a New Drug Application filed with the FDA or an equivalent filing with a Regulatory Body in the Territory.

 

1.16          The term “Regulatory Approval” shall mean all approvals (including pricing and reimbursement approvals, if applicable), licenses, registrations or authorizations by the Regulatory Body in any jurisdiction in the world necessary to launch, sell, market, promote and distribute the Products in such regulatory jurisdiction.

 

1.17          The term “Patent Rights” shall mean any and all patents and patent applications in the Territory which are owned or controlled by Dainippon or under which Dainippon is or may become empowered to grant licenses, the subject matter of which is necessary or useful in use and/or manufacture of the Compounds or development, the Regulatory Approval, manufacture, use, marketing, promotion, sale or distribution of the Products, and shall be the patents and patent applications set forth in Schedule 1.17 attached hereto, as well as any patents and patent applications covering the Improvements (as defined in Section 18.01), together with any and all extensions, reissues, continuations in part, reexaminations, substitutions and renewals of or to any of the aforesaid patents or applications, and any patents issuing therefrom.  Dainippon shall use reasonable efforts to update Schedule 1.17 from time to time as reasonably necessary, at least once a year during the term of this Agreement, including in the event of registration or expiration of any of the Patent Rights, provided, however, in the event that Dainippon develops any Improvements with respect to the Compounds which Dainippon considers would be the Dominating Patent Rights (as defined hereinafter) and from which a patent is issuable, Dainippon shall grant Sunesis a semi-exclusive license with respect thereto for the purpose of development and manufacture of the Compounds and manufacture, sale, marketing, promotion and distribution of the Products; and provided further that to the extent a patent claims a particular drug formulation technology that is patentable without regard to the particular drug substance being delivered, and whose application is not limited to the Compounds, such patent shall not be included in the license to be granted pursuant to the foregoing proviso.

 

1.18          The term “Manufacturing Know-How” shall mean any and all proprietary information relating to manufacture of the Compounds which is reasonably owned by or available to Dainippon and is not subject to any Dainippon’s non-disclosure obligations.

 

1.19          The term “Marketing Year” shall mean any full calendar year after first launch of the Product by Sunesis in the Territory commencing on January

 

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1 and ending on December 31, provided that the first (1st) Marketing Year shall commence on the day of first launch of the Product by Sunesis, its Affiliate(s) or the Sublicensee(s) in the Territory and end on December 31 of the following calendar year.

 

1.20          The term “Net Selling Price” shall mean the average selling price for the Products during a given period which shall be calculated by dividing the Net Sales during such period by the total number of the Products sold by Sunesis, its Affiliates and the Sublicensees.

 

1.21          The term “Net Sales” shall mean the actual gross sales of the Products sold by Sunesis, its Affiliates and the Sublicensees to a non-Affiliate third party (excluding any sales among Sunesis, its Affiliates and the Sublicensees) less the following amounts related to the Products: (a) reasonable and customary credits, allowances, discounts, rebates, and chargebacks for spoiled, damaged, outdated, rejected, and returned Products, (b) reasonable and customary freight and insurance costs incurred with respect to the shipment of the Products to customers, in each case if charged separately on the invoice and paid by the customer, (c) duties, surcharges and other governmental charges, (d) sales, use, value-added, excise and other similar taxes (excluding income taxes), (e) rebates, normal and customary cash, quantity, trade and similar discounts and allowances and other price reductions reasonably and actually granted or paid by Sunesis, its Affiliates and the Sublicensees in so far as they relate directly to sales of the Products, and (f) actual uncollectible amounts.  Net Sales shall not include transfers of the Products for use in clinical trials, development or other transactions that are not a full commercial sale, and no royalty shall be due hereunder with respect to such transfers.

 

1.22          The term “Dainippon” shall include, where applicable, Dainippon’s Affiliate(s) designated by Dainippon as provided for in Section 2.03.

 

1.23          The term “Sunesis” shall include, where applicable, its Affiliate(s).

 

1.24          The term “Major Market Countries” shall mean the United States of America, Canada, Japan, Germany, Spain, France, Italy, and the United Kingdom.

 

1.25          The term “Sublicensee” shall mean a non-Affiliate third party to whom Sunesis has granted the right to develop, manufacture, promote, market, use, sell, offer for sale, import and/or distribute the Products within the scope of the license hereunder, including the marketing partner set forth in Section 10.01, provided that such third party has primary responsibility for the development, manufacture, promotion, marketing, use, sale, offer for sale, importation and/or distribution of such Products in its distribution territory as granted by Sunesis subject to Section 2.05 and has the right to record sales of such Products for its account, provided that Sunesis shall remain responsible for performance of such third party hereunder.  For clarity, the Sublicensee(s) shall exclude any wholesaler or reseller of the Products which is not primarily responsible for marketing or promotion of the Products.  This definition shall not be construed to limit

 

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the scope of sublicenses which may be granted hereunder.

 

Article 2.         Grant

 

2.01          Dainippon shall grant and hereby grants Sunesis a license, with the right to grant and authorize sublicenses, under the Patent Rights and the Information and Know-How to develop, manufacture, promote, market, use, sell, offer for sale, import and/or distribute the Compounds and/or the Products in the Territory.  The license and right granted herein shall be exclusive (even as to Dainippon), except that the license granted herein with respect to a patent application for an intermediate of the Compound (Japanese Patent Application No. 10-173986) as specified in Schedule 1.17 attached hereto and the patents issuing thereon shall be non-exclusive.  Dainippon agrees not to (a) manufacture, promote, market, use, sell, offer for sale, import or distribute the Compounds and/or the Products for any commercial purpose, or (b) license any of the Patent Rights or the Information and Know-How to any third party to develop, manufacture, promote, market, use, sell, offer for sale, import and/or distribute the Compounds and/or the Products for any use including veterinary uses.  Notwithstanding the foregoing, Dainippon shall have the right to license the patent application for the intermediate of the Compound claimed in Japanese Patent Application No. 10-173986, as well as the patents issuing thereon, to third parties; provided that neither Dainippon nor such third parties shall have the right to use the intermediate in the manufacture of the Compounds and/or the Products.  In addition, in the event that Dainippon develops any Improvements which Dainippon considers would be the Dominating Patent Rights and from which a patent is issuable, Dainippon shall grant Sunesis a semi-exclusive license with respect to the Improvements of the Compounds developed by Dainippon as described in Section 1.17.

 

2.02          Except as provided in Section 23.01, the license granted Sunesis by Dainippon in Section 2.01 shall be non-assignable.  For purposes of this Section 2.02, assignment shall mean a transfer of all rights and obligations of Sunesis under this Agreement, such that Sunesis retains no rights and obligations with respect to the Compounds and the Products.

 

2.03          Sunesis may designate its Affiliate(s) to carry out its rights and obligations hereunder in whole or in part, subject to Section 2.06 below, in which event Sunesis shall promptly, but in no event later than sixty (60) days following such designation, inform Dainippon in writing of the identity of such Affiliate(s) and other reasonable information regarding such Affiliate(s), including the nature of the rights and obligations given to the Affiliate(s).

 

2.04          Sunesis may, at its cost, risk and responsibility, retain any contract research organization(s) or other third party (hereinafter collectively referred to as “CRO”) to have any Test or other services carried out by the CRO on Sunesis’ behalf, subject to Section 2.06 below.

 

2.05          Sunesis may appoint the Sublicensee(s) under the license granted

 

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Sunesis by Dainippon herein, subject to Sections 2.02 and 2.06, provided that Sunesis shall inform Dainippon of the identity of such Sublicensee(s) and other reasonable information regarding such Sublicensee(s) promptly, but in no event later than sixty (60) days following such appointment.  In addition, Sunesis agrees that prior to the appointment of a Sublicensee within a Major Market Country, to the extent it has the right to do so, Sunesis shall provide Dainippon with other agreed information regarding such Sublicensee.  In the event Sunesis grants a sublicense hereunder, Sunesis shall use diligent efforts to obtain from such Sublicensee the same, substantially similar or more stringent material obligations, including diligence obligations, to the extent applicable, as Sunesis has hereunder.

 

2.06          In the event that Sunesis delegates some or all of its rights and/or obligations under this Agreement to its Affiliate(s), the Sublicensee(s) and/or the CRO, Sunesis shall remain responsible for the performance of such rights and/or obligations.

 

2.07          Dainippon may designate its Affiliate(s) to carry out its rights and obligations hereunder in whole or in part, in which event Dainippon shall promptly, but in no event later than sixty (60) days following such designation, inform Sunesis in writing of the identity of such Affiliate(s) and other reasonable information regarding such Affiliate(s), including the nature of the rights and obligations given to the Affiliate(s), and shall remain responsible for the performance of such rights and obligations.

 

Article 3.         Payment

 

3.01          Sunesis shall make the following payments to Dainippon in consideration of the license granted to it under this Agreement (it being understood that each of the Initial Payment and the Milestone Payments set forth below shall only be paid one time):

 

(a)            Initial Payment of United States Dollars [*] (US$[*]), payable within thirty (30) days after the Effective Date, provided that the option fee of United States Dollars [*] (US$[*]) paid by Sunesis to Dainippon under the Option Agreement shall be credited against the Initial Payment;

 

(b)            Milestone Payment of United States Dollars [*] (US$[*]), payable within sixty (60) days after the date of the dosing of the first patient in the first Phase II Clinical Study for the first Product in the Territory;

 

(c)            Milestone Payment of United States Dollars [*] (US$[*]), payable within sixty (60) days after the date of the dosing of the first patient in the first Phase III Clinical Study for the first Product in the Territory, provided that in case no Phase III Clinical Study is required for such Product in the Territory, the amount of United

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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States Dollars [*] (US$[*]) for this Milestone Payment shall be paid simultaneously with the first payment of any of the Milestone Payments in subsection (d), (e) or (f) below;

 

(d)            Milestone Payment of United States Dollars [*] (US$[*]), payable within thirty (30) days after the date of filing of the first NDA for the first Product in the United States of America for treatment or prevention of cancer.  For purposes of this subsection (d), “the date of filing” means the date of acceptance of such first NDA for substantive review by the FDA as specified in 21 CFR 314.101(a);

 

(e)            Milestone Payment of United States Dollars [*] (US$[*]), payable within thirty (30) days after the date of filing of the first NDA for the first Product in any of the Major Market Countries in Europe for treatment or prevention of cancer.  For purposes of this subsection (e), “the date of filing” means the date of acceptance of such first NDA for substantive review by the Regulatory Body in any of the Major Market Countries in Europe, or such later date as may be provided by applicable law or regulation;

 

(f)             Milestone Payment of United States Dollars [*] (US$[*]), payable within thirty (30) days after the date of filing of the first NDA for the first Product in Japan for treatment or prevention of cancer.  For purposes of this subsection (f), “the date of filing” means the date of acceptance of such first NDA for substantive review by the Regulatory Body in Japan or such later date as may provided by applicable law or regulation;

 

(g)            Milestone Payment of United States Dollars [*] (US$[*]), payable within thirty (30) days after the date of the first receipt of the Regulatory Approval for the first Product in the United States of America for treatment or prevention of cancer;

 

(h)            Milestone Payment of United States Dollars [*] (US$[*]), payable within thirty (30) days after the date of the first receipt of the Regulatory Approval for the first Product in any of the Major Market Countries in Europe for treatment or prevention of cancer;

 

(i)             Milestone Payment of United States Dollars [*] (US$[*]), payable within thirty (30) days after the date of the first receipt of the Regulatory Approval for the first Product in Japan for treatment or prevention of cancer; and

 

(j)             Milestone Payment of United States Dollars [*] (US $[*]), payable within thirty (30) days after the date of the first receipt of the Regulatory Approval for a Product for any indication other than treatment or prevention of cancer in any of the Major Market Countries.  It is understood and agreed that the Products for such

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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non-cancer indications, and the development, clinical studies, regulatory filings and the Regulatory Approvals thereof, if any, shall be subject to this Milestone Payment (j) only (i.e. such Products shall not be subject to the Milestone Payments (a) through (i) above) and this Milestone Payment (j) shall be paid only one time (upon its first achievement).

 

For avoidance of doubt, the parties acknowledge that in no event shall the total amount payable under this Section 3.01 exceed United States Dollars [*] (US$[*]), less any applicable credits.

 

3.02          Sunesis shall pay royalties on annual Net Sales of the Products by Sunesis, its Affiliate(s) and the Sublicensee(s) in the Territory.  Royalties shall be payable within sixty (60) days after December 31 of each calendar year.

 

For any sales of the Products made by Sunesis and its Affiliate(s), Sunesis shall pay Dainippon royalties based on the following table, with each royalty percentage being applicable to the portion of the annual Net Sales of the Products falling within the relevant band of the Net Sales for a calendar year.

 

Total annual Net Sales of Products by Sunesis and its Affiliates

 

Applicable royalty rate

 

US$[*] or less

 

[*]

%

Greater than US$[*]

 

[*]

%

 

For example, if in a calendar year, Net Sales of US$[*] was realized by Sunesis and its Affiliate(s), the royalty payable would be US$[*] ([*]% of the first US$[*] and [*]% of the next US$[*]).

 

For any sales of the Products made by any Sublicensee(s), Sunesis shall pay Dainippon royalties equal to [*] percent ([*]%) of total annual Net Sales by the Sublicensee(s).

 

For purposes of the foregoing, it is understood that annual Net Sales shall be calculated on a calendar year basis.

 

3.03          Sunesis shall, from time to time and/or at the request of Dainippon, provide Dainippon with its best estimate of the timing of the events relating to the Milestone Payments as provided for in Section 3.01, and shall promptly notify Dainippon of such events upon occurrence thereof.

 

3.04          The royalties under Section 3.02 shall be payable on a country-by-country basis with respect to each Product until: (a) expiry of the last to expire of the patents within the Patent Rights (or, if any, the patents owned by Sunesis) covering such Product sold in such country and/or the Compound contained in such Product; or (b) ten (10) years following the date of commercial launch of the first Product in such

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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country, whichever is longer; provided that in any country in which a generic competitor to a Product has been introduced, if for any royalty period the Net Sales of the Product in such country declines by [*] percent ([*]%) or more from the last full royalty reporting period prior to the first commercial sale of the generic competitor in such country, then the royalty rate applicable for sales of such Product in such country under Section 3.02 above shall be reduced for such period and the remainder of such royalty period to [*] percent ([*]%) of such royalty rate.  As used herein, a “generic competitor” shall mean a product sold by a third party that contains the same active ingredient as the Product hereunder.

 

3.05          In the event Sunesis, its Affiliate(s) or the Sublicensee(s) are required to pay a third party amounts with respect to a Product for a right or license under Dominating Patent Rights (as defined below), Sunesis may deduct [*] percent ([*]%) of such amount owing to such third parties (prior to any reductions) from the payments owing to Dainippon for such Product.  Notwithstanding the foregoing provisions of this Section 3.05, in no event shall the amounts due to Dainippon be so reduced to less than [*] percent ([*]%) of the amount that would otherwise be due to Dainippon.  In the event Sunesis proposes to acquire from a third party patent rights that Sunesis believes are Dominating Patent Rights, Sunesis shall advise Dainippon thereof, and the parties shall discuss the situation.  As used herein, “Dominating Patent Rights” shall mean patent rights without which development and/or manufacture of the particular Compound and/or manufacture, marketing, sale, promotion and/or commercialization of the particular Product would not be reasonably practicable, as determined by mutual agreement of the parties either prior to or following Sunesis’ acquisition of such third party patent rights.  If the parties are not able to agree whether a patent is a “Dominating Patent Right”, the determination shall be made pursuant to Section 25.01.

 

3.06          In the event that a Product is sold for a single combined price with another product, component, active ingredient or service for which no royalty would be due hereunder if sold separately, Net Sales from such combination sales for purposes of calculating the amounts due under this Article 3 shall be reasonably allocated between such Product and such other product, component, ingredient or service, based on the relative values thereof.

 

3.07          The payments made by Sunesis under Sections 3.01 and 3.02 shall be made in the United States Dollars by telegraphic transfer to a bank account designated by Dainippon and shall in any event be non-refundable.  The withholding tax relating to the payments, if any, shall be borne by Dainippon, and Sunesis shall provide Dainippon with appropriate evidence of Sunesis’ payments of the withholding tax.

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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Article 4.         Supply of Information

 

4.01          Dainippon represents and warrants that to the best knowledge of Dainippon, Dainippon has furnished Sunesis prior to the Effective Date with all substantial information requested by Sunesis (and has not withheld from Sunesis any material information) in its possession as of the Effective Date necessary or useful to enable Sunesis to properly evaluate safety and efficacy of the Compounds and/or the Products, or which would otherwise be material to Sunesis’ decision to enter into this Agreement and to undertake the obligations set forth herein, including all information provided to Sunesis under the Option Agreement, the Confidentiality Agreement or the Material Transfer Agreement.

 

4.02          Dainippon’s obligations under Article 3 of the Option Agreement to provide Sunesis with all documents listed in Schedule B thereto shall continue to apply to the extent that such obligations have not been satisfied by Dainippon prior to execution of this Agreement.  Upon execution of this Agreement, and from time to time for the duration of this Agreement thereafter when it becomes available to Dainippon, Dainippon shall promptly supply Sunesis with other Information and Know-How in Dainippon’s possession or available to Dainippon.

 

4.03          In addition to Section 4.02 above, if Sunesis or Dainippon identifies a particular item pertaining to the Compounds and/or the manufacture thereof that Dainippon owns or has the right to provide to Sunesis hereunder but has not been previously transferred to Sunesis, and without which Sunesis’ performance or exercise of rights under this Agreement would be materially impeded by not having such item, Dainippon shall use reasonable efforts to provide the same to Sunesis as soon as practicable, subject to such non-disclosure obligations to which the disclosure of such requested item may be subject.

 

4.04          Any Information and Know-How supplied by Dainippon to Sunesis before the Effective Date shall be regarded as having been supplied under this Agreement and shall be governed by the terms and conditions contained herein.

 

Article 5.         Reports and Consultation

 

5.01          Sunesis shall report to Dainippon in writing annually, providing a summary of its activities under this Agreement with respect to the Major Market Countries during a calendar year (each, an “Annual Report”), within sixty (60) days after December 31 of the relevant calendar year.  In addition, Sunesis agrees to provide Dainippon with such other summary of its activities under this Agreement as reasonably requested by Dainippon and agreed by Sunesis, which agreement shall not be unreasonably withheld (each, an “Additional Report”).

 

5.02          Prior to the commercial launch of the first Product, Sunesis shall include in the Annual Report and the Additional Report information regarding the progress during the relevant period of the Tests, and efforts, performed or undertaken by Sunesis, its Affiliates and, to the extent that Sunesis has the right to do so and such information is available to Sunesis, the Sublicensees, to obtain the Regulatory Approval of the Compounds and

 

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the Products in the Major Market Countries, and such other countries of the Territory as reasonably requested by Dainippon and agreed by Sunesis, which agreement shall not be unreasonably withheld, including the protocols as well as summaries of the results, in written and/or computerized form, of the major clinical studies within the Tests for the Major Market Countries hereunder initiated or completed during such period and any milestones achieved during such period, provided that Sunesis shall diligently seek to obtain such information relating to the Sublicensees from the Sublicensees as described in Section 2.05 above.  The parties acknowledge that the aggregate burden on Sunesis of providing information with respect to the countries other than the Major Market Countries requested by Dainippon under this Section 5.02 (and other information requested under Section 9.04 below), in relation to the significance to Dainippon of obtaining such incremental information at the time of such request, shall be a factor in determining whether it would be reasonable for Sunesis to withhold its agreement to provide such information.  In addition, each Annual Report provided to Dainippon under this Section 5.02 shall identify the primary CROs involved in the major clinical studies within the Tests conducted for the Major Market Countries during the period covered by such Annual Report.

 

5.03          After the commercial launch of the first Product, Sunesis shall include in the Annual Report information as specified in (a), (b), (c) and (d) below, and to the extent requested by Dainippon and agreed by Sunesis, which agreement shall not be unreasonably withheld, in the Additional Report the information as specified in (a) and (d) below:

 

(a)            the Net Sales and number of the Products sold in the relevant period by Sunesis, its Affiliates and the Sublicensees on a country-by-country basis,

 

(b)            a calculation of the royalties due on a country-by-country basis based on such Net Sales,

 

(c)            the total royalties so calculated and due Dainippon on a country-by-country basis,

 

(d)            the progress of any efforts in the relevant period to conduct further Tests or develop the Compounds and/or the Products in those countries in the Territory covered by Section 5.02 above in each case, to the extent the information is available and Sunesis has the right to provide the same, provided that Sunesis shall diligently seek to obtain such information.

 

5.04          In addition, Dainippon may request Sunesis to arrange a meeting between appropriate representatives of Dainippon and of Sunesis, its Affiliates and/or the Sublicensees to discuss in good faith the current status, prospect, strategy and other issues relating to the development and the Regulatory Approval of the Compounds and the Products as reflected in the Annual Report and/or the Additional Report and to discuss in good faith the way and strategy for optimizing the parties’ mutual success with respect to the Compounds and the Products.

 

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Sunesis shall make reasonable efforts to arrange such meeting as requested by Dainippon.  Such meetings shall take place no more frequently than once per calendar year and shall be held at Sunesis’ or its Affiliate’s facilities at times convenient for Sunesis.  Each party shall be responsible for its own costs in connection with such meetings.

 

Article 6.         Development and Regulatory Approval

 

6.01          Without limiting the rights granted in Article 2 above, Sunesis shall have the right and obligation to take at its sole expense, risk and responsibility, or have its Affiliates and/or the Sublicensees take at their expense, risk and responsibility, either by itself or themselves or through its or their designee, all necessary steps for securing and maintaining the Regulatory Approval and carrying out the Tests.  Sunesis shall undertake, or have its Affiliates and/or the Sublicensees undertake, such activities in accordance with Articles 6 and 14 and any applicable laws or regulations in the Territory.  Dainippon shall have no obligation to carry out any Test, and Sunesis agrees that no Test will be carried out by Dainippon.

 

6.02          Promptly after the Effective Date, Dainippon shall supply Sunesis at no additional cost to Sunesis with all quantities of the Compounds and intermediates as are available to Dainippon as of the Effective Date as set forth in Schedule 6.02 attached hereto.  Dainippon shall have no obligation to synthesize nor manufacture any further Compounds including any intermediates thereof, and Sunesis agrees that no further Compounds including any intermediates thereof will be synthesized nor manufactured by Dainippon.

 

6.03          Sunesis has provided Dainippon with its preliminary development plan for the Compounds and the Products as set forth in Schedule 6.03 attached hereto.  Sunesis shall provide Dainippon with a draft of the development plan for the Compounds and the Products within six (6) months after the Effective Date, and with a draft of the update annually to the extent the plans have been updated; provided that if the development plan has not been updated in such annual reporting period, Sunesis shall so state.  Dainippon shall review, and may comment on, the draft of the development plan and the update thereof, and the parties may discuss such comments and plans.

 

6.04          Sunesis shall, promptly after they become available to Sunesis, provide Dainippon with a copy of the letter of approval and the summary of product characteristic/package insert.  In addition, Sunesis shall, upon reasonable notice, provide Dainippon with (i) the initial IND package for the United States of America in written and/or computerized form, and (ii) electronic copies of the NDAs filed in the Major Market Countries, to the extent such copies exist in electronic format, in each case subject to Section 19.03 below and to the extent Sunesis has the right to provide the same, and will diligently seek to obtain such right from any Sublicensee with respect to the NDAs for the United States of America.

 

6.05          In the event that Sunesis does not intend to continue its efforts to secure the Regulatory Approval by itself or through its Affiliate(s) or the

 

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Sublicensee(s) due to any reason in (i) Asia and the Pacific Rim, (ii) North America, (iii) Europe, (iv) Latin America or (v) all other countries in the world (each of (i)-(v), as further defined in Schedule 6.05, being referred to as a “Region”), Sunesis shall immediately notify Dainippon thereof and the parties shall meet to discuss the situation, and Sunesis shall return to Dainippon its rights in the Products in such Region.  For clarity, it is understood that so long as Sunesis intends to continue such efforts, and uses diligent efforts consistent with its obligations under Section 14.01 to do so, in one or more countries in a Region, this Section 6.05 shall not apply to that Region.  In addition, the foregoing shall not apply in the event Sunesis makes such determination based upon factors relating to safety or efficacy of the Products as supported by clear evidence, or based on the potential for commercial harm to the Products in a Region that may be agreed upon between the parties (for example, the potential for parallel imports).  For clarity, it is understood that “diligent efforts” would not require Sunesis to simultaneously pursue each Region, as long as the activities and Regions it is pursuing are consistent with pursuing the particular Region within a reasonable time frame (which may, for example, be to pursue such Region after obtaining Regulatory Approval in another Region).

 

Article 7.         Publication

 

7.01          In the event that either party intends to publish a paper in a peer reviewed journal or make a scientific oral presentation containing non-public Information and Know-How relating to the Compounds and/or the Products, such party shall provide the other party with a draft of such publication for prior review (or, in the case of a public oral presentation, use reasonable efforts, to the extent practicable under the circumstances, to provide the other party with a summary of the proposed oral presentation for prior review).  Within fifteen (15) business days after receipt of a draft publication (or within five (5) days in the case of a public oral presentation) (the “Review Period”), the receiving party may review the draft and may give its written comments on the draft to the publishing party.  The publishing party shall prepare the final version of the publication or the oral presentation, taking the comments into consideration if appropriate.  Thereafter, the publishing party may disclose to third parties the information disclosed in such publication or oral presentation (i.e., in that or any subsequent publication or presentation) without the need for further approval by the other party.  In the event that no response is given by the receiving party to the publishing party within the applicable Review Period, the receiving party shall be deemed to have no comment on the draft.  Notwithstanding the foregoing, as Sunesis has been granted the exclusive right to commercialize the Products in the Territory, Sunesis shall have the right to make the final decision whether to proceed with any publication or oral presentation.  Sunesis shall have the right to approve (but shall not unreasonably withhold such consent) to any publication or oral presentation requested by Dainippon and, if no response is given by

 

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Sunesis to Dainippon within the applicable Review Period, Sunesis shall be deemed to consent to the publication or oral presentation.  With respect to publications or oral presentation by third parties, it is understood that the foregoing rights of review shall apply only to the extent the party hereto has the right to require such third party to comply.  Additionally, Sunesis shall use reasonable efforts to inform Dainippon of major publications and major public announcements of Test results, to the extent Sunesis has the right to do so and to the extent practicable, in advance of such publications and announcements.

 

Article 8.         Manufacture

 

8.01          Without limiting the rights granted in Article 2 above, Sunesis shall have the right and obligation to manufacture at its sole expense, risk and responsibility, or have its Affiliate and/or the Sublicensees manufacture at their expense, risk and responsibility, the Compounds and the Products by itself or themselves or through its or their designee for the purpose of this Agreement.  Dainippon shall have no obligation to supply nor manufacture the Compounds and the Products, and Sunesis agrees that no Compounds nor Products will be supplied nor manufactured by Dainippon.

 

8.02          In the event that Sunesis requests Dainippon to provide Sunesis with direct technical assistance (including ongoing assistance) with respect to manufacture or regulatory aspects of the Compounds, Dainippon shall make its reasonable efforts to provide such assistance to Sunesis, for example, by sending a person or persons qualified for this purpose to Sunesis’ facility or receiving Sunesis’ employee(s) in Dainippon’s facilities for such purpose.  Sunesis shall bear traveling, lodging and other out-of-pocket expenses incurred for such assistance as mutually agreed.  Dainippon shall, at Sunesis’ written request, cooperate with Sunesis in responding to requests from the Regulatory Bodies relating to the Compounds and/or the Products, including without limitation making its facilities available for audit and inspection by representatives of such Regulatory Bodies.  Notwithstanding the foregoing, nothing in this Section 8.02 shall relieve Dainippon of its obligation to supply the Compounds and intermediates listed in Schedule 6.02 attached hereto under the terms and conditions set forth in Section 6.02 and Dainippon shall make no warranty, express or implied, relating to such direct technical assistance.

 

Article 9.         Marketing and Sale

 

9.01          Without limiting the rights granted in Article 2 above, Sunesis shall have the right and obligation to perform at its sole expense, risk and responsibility, or have its Affiliates and/or the Sublicensees perform at their expense, risk and responsibility, by itself or themselves or through its or their designee, any promotion, marketing, sale and distribution of the Products in the Territory.  Sunesis shall undertake, or have its Affiliates and/or the Sublicensees undertake, such activities in accordance with Articles 9 and 14 below, and in accordance with all

 

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applicable laws and regulations.

 

9.02          Sunesis may use the trademark(s) selected by Sunesis for its marketing, promotion, sale and distribution of the Products in the Territory, and shall bear all expenses, risk and responsibility relating such trademark(s) used for the Products.

 

9.03          Sunesis has provided Dainippon with the preliminary non-binding sales forecast of the Products for the initial three (3) Marketing Years as set forth in Schedule 9.03 attached hereto.  Sunesis shall update such preliminary sales forecast with respect to sales in the Major Market Countries upon completion of the Phase II Clinical Studies.  Following receipt by Sunesis of the Regulatory Approval for a Product in a Major Market Country, Sunesis shall provide to Dainippon a three (3) year sales forecast for such Product in such country and shall update such forecast annually thereafter, which shall be used for purposes of Section 10.01 below.  It is understood that such forecast for any period may include a range of potential sales levels, based on alternative assumptions.  In addition, Sunesis shall diligently seek to provide annual sales forecasts following receipt by the Sublicensees of the Regulatory Approval for the Major Market Countries relating to the Sublicensees (it being understood, however, that Section 10.01 shall not apply to the Sublicensees).

 

9.04          Sunesis shall notify Dainippon within sixty (60) days of its receipt (or receipt by its Affiliate(s) or the Sublicensee(s)) of the Regulatory Approval in any country of the Territory and shall, within a reasonable time after obtaining the Regulatory Approval in a Major Market Country and such other countries of the Territory as reasonably requested by Dainippon and agreed by Sunesis, which agreement shall not be unreasonably withheld, furnish Dainippon with an estimated date of launch of the Products and an outline of how Sunesis, its Affiliate(s) or, to the extent available, the Sublicensee(s) intends to market the Products in such country, provided that Sunesis shall diligently seek to obtain such information relating to the Sublicensees from the Sublicensees as described in Section 2.05 above.  The parties acknowledge that the aggregate burden on Sunesis of providing information with respect to the countries other than the Major Market Countries requested by Dainippon under Section 9.04 above (and other information requested under this Section 5.02), in relation to the significance to Dainippon of obtaining such incremental information at the time of such request, shall be a factor in determining whether it would be reasonable for Sunesis to withhold its agreement to provide such information.

 

9.05          In the event that Sunesis intends not to launch the Products in a given Region, or having launched a Product in a given Region, intends to discontinue all sales of the Products (including sales through its Affiliate(s) or the Sublicensee(s)) within such Region, Sunesis shall immediately notify Dainippon thereof and the parties shall meet to discuss the situation and Sunesis shall return to Dainippon its rights in the Products in such Region.  For clarity, it is understood that so long as

 

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Sunesis intends to so launch or continue such sales of the Products, and uses diligent efforts consistent with its obligations under Section 14.01 to do so, in one or more countries in a Region, this Section 9.05 shall not apply.  In addition, the foregoing shall not apply in the event Sunesis makes such determination based upon factors relating to safety or efficacy of the Products as supported by clear evidence, or based on the potential for commercial harm to the Products in a Region that may be agreed upon between the parties (for example, the potential for parallel imports).  For clarity, it is understood that “diligent efforts” would not require Sunesis to simultaneously pursue each Region, as long as the activities and Regions it is pursuing are consistent with pursuing the particular Region within a reasonable time frame (which may, for example, be to pursue such Region after obtaining Regulatory Approval in another Region).

 

Article 10.       Minimum Sales Amount

 

10.01        If despite its commercially reasonable efforts, Sunesis fails in any two (2) consecutive Marketing Years to attain at [*] percent ([*]%) of the estimated minimum annual sales amount of the Products as set forth in the most recent forecast provided under Section 9.03 for the Major Market Countries in which Sunesis or its Affiliate(s) market the Products, the parties shall meet to discuss the situation and potential solutions, such as (where appropriate and commercially reasonable) for Sunesis to recruit the efforts of a marketing partner.  In the event of recruiting a marketing partner under this Section 10.01, Sunesis shall provide Dainippon with reasonable details of the proposed marketing partner including but not limited to its sales capacity and products, and Dainippon may approve or disapprove the proposed marketing partner, but shall not unreasonably withhold the approval.

 

Article 11.       Records; Audits

 

11.01        Sunesis shall keep accurate and adequate records with respect to the Net Sales of the Products by Sunesis, its Affiliate(s) and the Sublicensee(s), including the Net Selling Price thereof, during the term of this Agreement and upon Dainippon’ written request, but not more frequently than once per calendar year, shall permit a certified independent public accountant selected by Dainippon and reasonably acceptable to Sunesis to examine the books and records of Sunesis, its Affiliate(s) and the Sublicensee(s) during regular business hours of Sunesis, its Affiliate(s) and, to the extent provided below, the Sublicensee(s), to verify the accuracy thereof but only with respect to any calendar year ending not more than two (2) years prior to the date of the examination.  To the extent that Sunesis does not have the right to grant Dainippon the right to audit the Sublicensees’ books and records hereunder, Sunesis shall, upon Dainippon’s request, exercise its own audit right with respect to the Sublicensees by having such audit carried

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions

 

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out by a certified independent public account selected by Sunesis and reasonably acceptable to Dainippon and provide the results of such audit for inspection by Dainippon pursuant to this Section 11.01.  Sunesis shall provide any information reasonably required to explain its records to the extent necessary.  If the certified independent public accountant’s report establishes that the figures previously provided to Dainippon by Sunesis were incorrect and as the result, amount of the royalties already paid by Sunesis is different from the amount that should have been paid, the amount of difference shall be compensated by Sunesis or Dainippon, as the case may be, within sixty (60) days after receipt of such report by Dainippon.  The fee and expense of the certified independent public accountant shall be borne by Dainippon, except that such fee and expense shall be borne by Sunesis if the certified independent public accountant’s report indicates Sunesis has underpaid amounts owed hereunder by [*] percent ([*]%) during such audited period.

 

Article 12.       Protection of Patent Rights

 

12.01        Dainippon shall at its own expense and responsibility maintain the Patent Rights in the Territory, and agrees to take any necessary steps to extend the patent term of the Patent Rights as reasonably requested by Sunesis.  Sunesis shall cooperate, and have the Sublicensee(s) cooperate, with Dainippon in extension of patent term of the Patent Rights and at the request and expense of Dainippon, shall take any necessary steps to extend the patent term of the Patent Rights on behalf of Dainippon.  Additionally, Dainippon agrees to keep Sunesis informed regarding the status and maintenance of the Patent Rights and the prosecution of any patent applications therein by updating Schedule 1.17, and without limiting the foregoing shall not allow any patent or patent application within the Patent Rights to lapse without Sunesis’ mutual consent.

 

12.02        Each party shall inform the other party promptly when it becomes aware that a third party is infringing or attempting to infringe the Patent Rights.

 

12.03        Dainippon is not obliged to indemnify Sunesis, its Affiliate(s) and the Sublicensee(s) for any damage or loss caused from infringement by any third party of the Patent Rights, but Dainippon shall grant Sunesis the first right, but not the obligation, to institute, by itself or through Sunesis’ designee, at its expense, such action, suit or proceeding as Sunesis may consider necessary to stop the infringement (hereinafter referred to as “Enforcement Action”).  If within ninety (90) days after Dainippon has requested Sunesis to initiate a suit with respect to a particular alleged infringement, Sunesis has failed by itself or through its designee to initiate an Enforcement Action to stop the infringement or use reasonable efforts to settle such infringement, then Dainippon shall be entitled, but have no obligation, to initiate an Enforcement Action at its expense against the infringing party.  The party initiating an Enforcement Action (hereinafter

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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referred to as the “Enforcing Party”) shall control such action, provided that the other party (hereinafter referred to as the “Non-Enforcing Party”) shall have the right to participate therein with advisory counsel of its own choice at its own expense.  All recoveries received from an action to enforce the Patent Rights shall be first applied to reimburse the Enforcing Party’s, and then the Non-Enforcing Party’s, unreimbursed expenses, including without limitation, reasonable attorney’s fees and court costs.  Any remainder shall, to the extent the same pertains to an infringement of the Patent Rights, be divided [*] percent ([*]%) to the Enforcing Party and [*] percent ([*]%) to the Non-Enforcing Party.

 

12.04        The Non-Enforcing Party shall cooperate with the Enforcing Party with respect to any Enforcement Action, in all aspects and shall make available any relevant personnel, records, documents, information, evidence, samples, papers, materials and the like for the action in its possession, and shall upon the request of the Enforcing Party, join as a party-plaintiff in any such Enforcement Action to the extent such joinder is required by law to bring such action, provided that for purposes of this Section 12.04, the Non-Enforcing Party shall not be required to dispatch more personnel and expend more resources hereunder than may be legally required or otherwise agreed upon by the parties.

 

Article 13.       Representations and Warranties; Disclaimer

 

13.01        Dainippon represents and warrants that to the best of Dainippon’s knowledge as of the Effective Date:

 

(a)            Dainippon is the owner of the right, title, and interest in and to the Compounds and the Patent Rights and agrees not to transfer ownership of the Patent Rights to any third party during the period of this Agreement without the prior written consent of Sunesis.  Dainippon has the sole right and authority to enter into this Agreement and grant the rights and licenses hereunder.

 

(b)            Dainippon has not previously granted, and during the period of this Agreement will not grant, any rights in the Compounds and the Patent Rights that are inconsistent with the rights and licenses granted to Sunesis herein. Dainippon shall not suffer or permit any liens or restrictions to be imposed on the Patent Rights without the prior written consent of Sunesis unless the lien holder agrees to take such intellectual property subject to Sunesis’ rights therein.

 

(c)            Schedule 1.17 accurately and completely identifies all of the patents and patent applications within the Patent Rights as of the Effective Date.  To the extent that Dainippon has omitted from the Patent Rights any patent or patent application, the claims of which would dominate the practice of the Patent Rights or be

 


[*] Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

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infringed by the manufacture, sale, use, importation or other exploitation of the Compounds, Dainippon shall grant Sunesis a semi-exclusive license, including the right to sublicense, under such patent to perform the rights and obligations of this Agreement.

 

(d)            There are no patent rights of any third party which may prevent or hinder any performance of obligations or exercise of rights under this Agreement, and none of the Patent Rights are invalid, unenforceable or have been misused; provided that no such warranty is made under this Section 13.01(d) with respect to patent rights disclosed to Sunesis in writing prior to the Effective Date.

 

(e)            With respect to the composition of matter, method of use and manufacture relating to the Compounds, Dainippon owns the right, title and interest in and to the Compounds and the Products.

 

(f)             As of the Effective Date, there are no existing actions, suits or proceedings, and Dainippon has not received any written claim or demand from a third party, that challenges Dainippon’s rights with respect to the Patent Rights, the Information and Know-How, the Compounds and/or the Products or Dainippon’s rights to enter into this Agreement or that asserts that development, manufacture or sale of the Compounds and/or the Products would infringe the intellectual property rights of a third party.

 

13.02        Except as set forth in Section 13.01, Dainippon does not warrant that the Patent Rights granted Sunesis by Dainippon hereunder are valid and do not infringe upon any patent rights or other intellectual property rights held or to be held by third parties in the Territory or that Sunesis’ performances under this Agreement are free from infringement upon any rights or licenses held or to be held by third parties in the Territory.  Except pursuant to the representations and warranties set forth in Section 13.01, Dainippon is not obliged to indemnify Sunesis, its Affiliates and the Sublicensees for any cost, loss or damage caused by invalidity of the Patent Rights or infringement by the Compounds and/or the Products upon any rights or licenses held by third parties.

 

13.03        Each party hereto shall notify the other party promptly in the event of the receipt of notice of any action, suit or claim alleging infringement by the Compounds and/or the Products upon any patent rights or other intellectual property rights held by a third party.  Sunesis shall have the right to control the defense of such action, suit or claim alleging infringement.  Any liability and expenses incurred by Sunesis in such defense shall be treated as amounts paid for third party patent rights under Section 3.05 above to the extent such third party patent rights are Dominating Patent Rights.  In the event that the Patent Rights are alleged to be invalid by such third party, Sunesis shall have the right, but not the obligation, to defend against such claims of invalidity, provided that

 

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Dainippon shall have the right to participate therein with advisory counsel of its own selection at its own expense.  In the event Sunesis elects not to defend against such claims of invalidity, Dainippon shall take at its own expense, risk and responsibility any step to cope with the claim of invalidity, provided that Dainippon reasonably judges that there is commercial interest for Dainippon to cope with the claim of invalidity.

 

13.04        NEITHER PARTY SHALL BE LIABLE TO THE OTHER PARTY FOR ANY SPECIAL, CONSEQUENTIAL, EXEMPLARY OR INCIDENTAL DAMAGES (INCLUDING LOST OR ANTICIPATED REVENUES OR PROFITS RELATING TO THE SAME), ARISING FROM ANY CLAIM RELATING TO THIS AGREEMENT, WHETHER SUCH CLAIM IS BASED ON CONTRACT, TORT (INCLUDING NEGLIGENCE) OR OTHERWISE, EVEN IF ADVISED OF THE POSSIBILITY OR LIKELIHOOD OF SAME.

 

Article 14.       Diligence

 

14.01        Sunesis shall either directly or through its Affiliates and/or the Sublicensees use commercially reasonable diligent efforts to develop, commercialize, promote, market, sell and distribute the Products in the Territory.  In addition, Sunesis shall use such efforts to appoint the Sublicensees where and when Sunesis reasonably considers appropriate.

 

Article 15.       Indication of Collaboration

 

15.01        To the extent required by applicable laws and regulations in a particular country within the Territory or reasonably requested by Dainippon, Sunesis shall refer to Dainippon as “Under license from Dainippon Pharmaceutical Co., Ltd.” or any other wording as agreed upon between the parties in all package, package insert and promotional literature for the Products being marketed by Sunesis and its Affiliates for use in such country.  In addition, to the extent required by applicable laws and regulations in a particular country within the Territory, or as reasonably requested by Dainippon where Sunesis has the right to do so, Sunesis shall require the Sublicensee(s) to mark the package and the package insert for the Products with the words “Under license from Dainippon Pharmaceutical Co., Ltd.” or other wording as agreed upon between the parties.

 

Article 16.       Independent Contractor

 

16.01        Each of the parties hereto shall act as an independent contractor hereunder and neither of the parties shall bind, or attempt to bind the other party to any other contract or any performance of any obligation not included herein except as to which the other party specifically agrees.  Nothing contained herein or done hereunder shall be construed as constituting either party the agent of the other party in any sense of the term whatsoever.

 

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Article 17.       Indemnification

 

17.01        Sunesis shall indemnify Dainippon and Dainippon’s Affiliates against and hold Dainippon and Dainippon’s Affiliates harmless from any and all liability, loss, judgment, damage or expense (including reasonable attorney’s fee) (hereinafter collectively referred to as “Loss”) by reason of litigation brought or otherwise for claims made by a third party against Dainippon or Dainippon’s Affiliates arising out of or by reason of or in connection with Sunesis’, its Affiliates’ and/or the Sublicensees’ performance of this Agreement including but not limited to use and manufacture of the Compounds and test, development, manufacture, packaging, promotion, marketing, sale and distribution of the Products in each case by Sunesis, its Affiliates and/or the Sublicensees, except to the extent that the Loss is attributable to any negligent or intentional act or omission of Dainippon or Dainippon’s Affiliates, or otherwise falling within the claims described in Section 17.02 below.  Dainippon shall promptly notify Sunesis of any such claim or litigation, shall reasonably cooperate with and provide full information to Sunesis with respect thereto and shall permit Sunesis to handle and control such claim or litigation at Sunesis’ cost and expense, to the extent Dainippon desires indemnification therefor, and Dainippon shall have the right to participate in any defense or settlement thereof with its own counsel at its own expense.

 

17.02        Dainippon shall indemnify Sunesis, its Affiliates and the Sublicensees against and hold Sunesis, its Affiliates and the Sublicensees harmless from any and all liability, loss, judgment, damage or expense (including reasonable attorney’s fee) by reason of litigation brought or otherwise for claims made by a third party against Sunesis, its Affiliates and/or the Sublicensees arising out of or by reason of any negligent or intentional act or omission of Dainippon or any breach by Dainippon of its warranties under Section 13.01.  Sunesis shall promptly notify Dainippon of any such claim or litigation, shall reasonably cooperate with and provide full information to Dainippon with respect thereto and shall permit Dainippon to handle and control such claim or litigation at Dainippon’s cost and expense to the extent Sunesis desires indemnification therefor, and Sunesis shall have the right to participate in any defense or settlement thereof with its own counsel at its own expense.

 

Article 18.       Improvement

 

18.01        In the event that Dainippon or Sunesis makes any improvement, invention or discovery relating to the Compounds and/or the Products including formulation of the Products and derivative of the Compounds (hereinafter referred to as “Improvement”), the inventing party shall have the right, title and interest in the Improvement and any patent application or patent covering the Improvement, subject to the licenses granted herein (i.e., subject to Sunesis’ license under Section 2.01 in the case of an Improvement by Dainippon and subject to Dainippon’s license under Section 21.01 in the case of an Improvement by Sunesis).

 

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Notwithstanding the foregoing, Improvements consisting of drug formulation technology that is patentable without regard to the particular drug substance being delivered, and whose application is not limited to the Compounds, shall not be subject to the licenses granted in Sections 2.01 and 21.01.  As used herein, “Improvements” shall include such inventions made by Dainippon’s other licensees or Sunesis’ Sublicensees, to the extent Dainippon or Sunesis, respectively, has the right to include the same hereunder, provided that Dainippon and Sunesis shall diligently seek to obtain such right.

 

Article 19.       Confidentiality

 

19.01        Sunesis and Dainippon shall each maintain confidential and not use or disclose information received from the other party under this Agreement in writing and marked “Confidential” or otherwise to indicate its proprietary nature or that is disclosed orally and confirmed in writing as confidential within a reasonable time following the initial disclosure thereof (hereinafter collectively referred to as “Confidential Information”), except for information:

 

(a)            which must be disclosed by any of the parties to the Regulatory Body to the extent the same is reasonably necessary to enable the attainment of the purpose of this Agreement; or

 

(b)            which is subsequently disclosed in literature available to the public but only to the extent of the disclosure thereof; or

 

(c)            the disclosure of which is expressly approved by the providing party; or

 

(d)            which is made public by a third party without the receiving party’s fault; or

 

(e)            which is known to the receiving party at the time of disclosure; or

 

(f)             which the receiving party can demonstrate was developed independently of the Confidential Information disclosed hereunder; or

 

(g)            which is received by the recipient without any obligation of confidentiality from a third party as a result of lawful and proper disclosure by such third party.

 

19.02        Notwithstanding the foregoing, Sunesis shall have the right to use and disclose the Confidential Information within the Information and Know-How, subject to Section 7.01 above, provided that Sunesis shall not disclose the Confidential Information to third parties other than for purposes of this Agreement (including in connection with fund raising activities, recruitment of patients and clinicians for clinical trials, and other activities that may directly or indirectly assist Sunesis’ development or commercialization of the Products).  In addition, Sunesis may disclose the Confidential Information within the Information and Know-How to the Sublicensees and permit the Sublicensees to use the Confidential Information for the sole purpose of this Agreement, provided that the

 

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Sublicensees shall have the same, substantially similar or more stringent confidentiality obligations as provided for in this Article 19.  With respect to Dainippon’s use and disclosure of the Confidential Information within the Information and Know-How, it is understood that the exclusivity provided to Sunesis under Section 2.01 above means that during the term of the Agreement, Dainippon shall not disclose to any third party the Information and Know-How, provided however that the foregoing restriction shall not apply to the Manufacturing Know-How.

 

19.03        Notwithstanding any other provision of this Agreement, the protocols, summary results, NDAs and other information regarding the Tests supplied to Dainippon pursuant to this Agreement, including Sections 5.02, 5.03, and 6.04, are for Dainippon’s informational purposes only and Dainippon shall not use or disclose such documents and the information contained therein for any purpose, provided however that the foregoing shall not apply to the designation of a third party by Dainippon pursuant to Section 21.02 following termination of this Agreement.

 

19.04        The obligation of confidentiality and non-use under this Article 19 shall survive expiration or early termination of this Agreement.

 

19.05        Notwithstanding the provisions of Section 19.01, but subject to Sections 19.03 above, the receiving party may also use or disclose the Confidential Information of the disclosing party to the extent it exercises its rights hereunder (including commercialization and/or sublicensing of the Compounds, the Products, the Patent Rights and the Information and Know-How) or fulfills its obligations and/or duties hereunder and in filing for, prosecuting or maintaining any proprietary rights, prosecuting or defending litigation, complying with applicable governmental regulations and/or submitting information to tax or other governmental authorities; provided that if the receiving party is required by law to make any public disclosures of the Confidential Information of the disclosing party, to the extent it may legally do so, it shall give reasonable advance notice to the disclosing party of such disclosure.

 

19.06        Except as expressly provided herein, each party agrees not to disclose any terms of this Agreement to any third party without the prior written consent of the other party, except that a party may disclose the terms or conditions of this Agreement (a) as required by securities or other applicable laws; (b) to prospective and other investors; (c) to such party’s accountants, attorneys and other professional advisors; or (d) to other third parties on a need to know basis under an obligation of confidentiality.

 

19.07        Upon execution of this Agreement, the parties shall agree upon the timing and content of a press release relating to execution of this Agreement. Thereafter, each party may disclose to third parties the information disclosed in such press release without the need for further approval by the other party.

 

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Article 20.       Term of Agreement

 

20.01        This Agreement takes effect on the Effective Date, and unless sooner terminated as provided in Article 22, shall expire upon the expiration of all obligations of Sunesis to make payments under this Agreement.  Sunesis’ license with respect to the Compounds, the Products and the Information and Know-How shall survive the expiration (but not an earlier termination, except as provided in Section 22.05 below) of this Agreement and shall be fully paid-up, royalty-free and perpetual.

 

Article 21.       Return of Rights upon Termination

 

21.01        Upon termination of this Agreement as provided for in Section 22.01 or 22.03, or for a material breach of this Agreement by Sunesis under Section 22.02 or bankruptcy of Sunesis under Section 22.04, all Information and Know-How on the Compounds and/or the Products shall be immediately returned to Dainippon, and thereafter Sunesis shall not be granted the right to develop, register, manufacture, use, promote, market, sell or distribute the Compounds and the Products by itself or through its Affiliates and/or (except as provided below) the Sublicensees, and Sunesis shall promptly assign to Dainippon or Dainippon’s designee free of charge, subject to 21.02 below, all approvals, permits, and registrations (including the Regulatory Approval) obtained by Sunesis, its Affiliate(s) and the Sublicensee(s) from a Regulatory Body with respect to the Compounds and/or the Products unless local laws prohibit such assignment, in each case to the extent that Sunesis has the right to make such return and/or assignment.  In addition, upon such termination Sunesis agrees to grant to Dainippon a non-exclusive license under any patent rights in the Improvements owned by Sunesis that are necessary to make, use or sell any Products for which Sunesis has conducted clinical trials during the term of this Agreement.  Notwithstanding the foregoing, Sunesis shall have no obligation to grant such license to Dainippon, or to assign to Dainippon any Regulatory Approvals, permits and registrations, and the rights and licenses granted hereunder shall not terminate, (i) to the extent relating to the Compounds and/or the Products that are being developed by a Sublicensee at the time of the termination of this Agreement if such Sublicensee notifies Sunesis and Dainippon of its intention to diligently continue such development and/or commercialization efforts and the Sublicensee diligently continues the development and/or commercialization, and in addition, in such case, Sunesis shall have no obligation to return the Information and Know-How provided to such Sublicensee, or (ii) in the event such termination is based upon factors relating to safety or efficacy of the Products as supported by clear evidence, or based on the potential for commercial harm to the Products in a Region that may be agreed upon between the parties (for example, the potential for parallel imports).  Dainippon shall reimburse Sunesis for all fees actually paid by Sunesis in transferring such approvals, permits, and registrations under this Section 21.01 (except in the event of breach by Sunesis).

 

21.02        In the event of a return of the Products to Dainippon by Sunesis under Section 21.01, except in the event of termination due to Sunesis’ material

 

24



 

breach or failure under Section 22.02, Dainippon and Sunesis shall discuss in good faith whether or not Dainippon should pay to Sunesis a reverse royalty on the net sales of the Products by Dainippon, its Affiliates and sublicensees, the amount of which shall be reasonably agreed to reflect Sunesis’ contribution in the development of such Products as well as the value of any Improvements that may be licensed to Dainippon under Section 21.01 above.

 

Article 22.       Termination

 

During the term of this Agreement, the Agreement may only be terminated in accordance with this Article 22.

 

22.01        Dainippon may terminate this Agreement pursuant to Section 6.05 or 9.05 in the event Sunesis has decided to discontinue seeking the Regulatory Approval and/or sale of the Products in the whole Territory and so notifies Dainippon in writing pursuant to Section 6.05 or 9.05.

 

22.02        In the event that Dainippon or Sunesis materially fails to fulfill (including a failure by Sunesis to ensure that a Sublicensee fulfills) or materially breaches the terms and conditions hereof, the other party shall give the breaching party a written notice to remedy such material failure or breach within ninety (90) days.  In cases where there is no dispute as to the failure or breach and such material failure or breach is not remedied by the breaching party within ninety (90) days of receipt of such notice, the complaining party may terminate this Agreement at its option.  However, if the party alleged to be in breach of this Agreement disputes such failure or breach within such ninety (90) day period, the complaining party shall not have the right to terminate this Agreement unless it has been determined by an arbitrator pursuant to Section 25.01 that this Agreement was materially breached, and the breaching party fails to comply with its obligations hereunder within ninety (90) days after such determination.

 

22.03        Sunesis may terminate this Agreement for its convenience by giving Dainippon at least one hundred twenty (120) days prior written notice; provided, however, that if Sunesis is terminating for reasons related to safety or efficacy of the Product supported by clear evidence, Sunesis may terminate this Agreement upon thirty (30) days prior written notice.  However, at least sixty (60) days prior to delivering such notice of termination, Sunesis shall apprise Dainippon of Sunesis’ desire to terminate this Agreement and, upon Dainippon’s request, the parties shall meet to review the situation and discuss in good faith as mutually agreed the best manner in which to proceed under the circumstances.

 

22.04        In the event that Dainippon or Sunesis is declared bankrupt, ceases all business or is subject to any proceedings for bankruptcy or dissolution, which proceedings if involuntary, are not dismissed within ninety (90) days after filing, or makes an assignment of substantially all of its assets for the benefit of creditors, the other party may terminate this Agreement immediately with a written notice.

 

25



 

22.05        In the event of any merger involving Sunesis, or a sale of all or substantially all of the assets of Sunesis, Dainippon has an option to terminate this Agreement by giving at least ninety (90) days prior written notice if, after such merger or sale, the surviving entity does not agree to use the same diligence in developing and/or marketing the Products as is required of Sunesis under Article 14 above.

 

22.06        Survival

 

(a)            Articles and Sections 1, 3.07, 11, 13.01, 13.02, 13.04, 16, 17, 18, 19, 21, 22.06, 23, 24, 25, 26, 27, 28 and 29 shall survive expiration or any termination of this Agreement.  Except as otherwise provided in this Section 22.06, all rights and obligations of the parties under this Agreement shall terminate upon the expiration or termination of this Agreement.

 

(b)            Expiration or termination of this Agreement shall have no effect on amounts due either party at the time of such expiration or termination, or any other obligations or liabilities that have accrued prior to such expiration or termination.

 

(c)            Subject to Section 21.01, upon termination of this Agreement by Dainippon for any reason, any sublicense granted by Sunesis hereunder shall survive, provided that Dainippon shall make, and Sunesis shall have the Sublicensee(s) make, reasonable efforts to conclude new agreement(s) between Dainippon and the Sublicensee(s) for the Products on terms substantially identical to this Agreement.

 

Article 23.       Assignment of this Agreement

 

23.01        This Agreement shall be binding upon and inure to the benefit of the parties hereto and their respective corporate successors and shall not be assigned by either party without prior written consent of the other party.  Notwithstanding the foregoing, either party may assign this Agreement and its rights and delegate its obligations hereunder (a) to any of its Affiliates as described in Section 2.03 above or (b) to a third party in connection with the transfer or sale of all or substantially all of its business relating to the subject matter of this Agreement, or in the event of its merger, consolidation, change in control or similar transaction; provided Dainippon shall have the right to terminate this Agreement in the event of (b) above, as provided in Section 22.05 above.  Any permitted assignee shall assume all obligations of its assignor under this Agreement.  Any purported assignment or transfer in violation of this Section 23.01 shall be void.

 

Article 24.       Force Majeure

 

24.01        Neither party shall be liable for failure to perform part or the whole of this Agreement when such failure is due to force majeure events including but not limited to fire, flood, earthquake, strike, labor troubles, delays of carriers, common carriers or other industrial disturbances, inevitable accidents, war (declared or undeclared), embargoes, blockades, legal

 

26



 

restrictions, riots, insurrections, governmental action, orders, legislation, regulations or restrictions, and/or any similar or other causes beyond control of the parties hereto, provided that any obligations of payment under this Agreement that have already accrued shall not be excused by such force majeure.

 

Article 25.       Arbitration

 

25.01        In the event of any controversy or claim arising out of or in relation to any provision of this Agreement or the breach thereof, the parties shall try to settle the problem between themselves.  Should they fail to agree, the matter in dispute shall be finally settled by arbitration in the English language (including all testimony therein) in accordance with the Rules of Arbitration of International Chamber of Commerce.  The arbitration shall be held in Geneva, Switzerland.  The award rendered by the arbitration shall in any case be final and binding upon the parties hereto.  Judgment upon the award may be entered in any court having jurisdiction thereof.

 

Article 26.       Governing Law

 

26.01        This Agreement shall be interpreted in accordance with and governed by the laws of Switzerland, without reference to conflict of laws principles.

 

Article 27.       Waiver

 

27.01        The waiver of any relief for any breach or non-fulfillment of any term or condition of this Agreement does not constitute a waiver of any relief for any other breach or non-fulfillment of that or any other term or condition.

 

Article 28.       Notice

 

28.01        Any notice required or permitted to be given hereunder by either party shall be given in writing, by registered or certified airmail or recognized courier service, or fax followed by registered or certified airmail or recognized courier service, addressed to the party for whom it is intended at the following address or such other address as such party may subsequently notify the other party in writing:

 

To Sunesis:            Sunesis Pharmaceuticals Inc.

341 Oyster Point Boulevard,

South San Francisco,

California 94080, the United States of America

Attention:   Daryl Winter, General Counsel

Facsimile number: +1-(650) 266-3506

 

To Dainippon:       Dainippon Pharmaceutical Co., Ltd.

6-8, Doshomachi 2-chome, Chuo-ku,

Osaka, 541-0045 Japan

Attention :   Takashi Wada, Senior Director, Legal Affairs

Facsimile number: +81-6-6202-6028

 

Article 29.       Entire Agreement and Miscellaneous

 

29.01        This Agreement supersedes any promise, agreement or consent

 

27



 

concerning the Compounds and/or the Products in relation to the subject matter of this Agreement made between the parties hereto by officers or employees of the parties before the execution of this Agreement, except the Option Agreement to the extent provided for in Section 4.02.

 

29.02        This Agreement may not be modified orally and no modification nor any claimed waiver of any of the provisions hereof shall be binding unless in writing and signed by both parties.

 

29.03        If any provision of this Agreement shall be found by a court to be void, invalid or unenforceable, the same shall be reformed to comply with applicable law or stricken if not so conformable, so as not to affect the validity or enforceability of the remainder of this Agreement.

 

29.04        This Agreement may be executed in counterparts, each of which shall be deemed an original, but both of which together shall constitute one and the same instrument.

 

IN WITNESS WHEREOF, the parties hereto have caused this Agreement to be executed by their duly authorized representatives as of the date first set forth above and each one of the two originals to be kept by the respective parties.

 

 

 

 

 

Dainippon Pharmaceutical Co., Ltd.

 

 

 

 

 

 

Date

 

 

 

By

/s/ Kenjiro Miyatake

 

 

 

 

 

 

Kenjiro Miyatake, President

 

 

 

 

 

 

 

 

 

 

Sunesis Pharmaceuticals Inc.

 

 

 

 

 

 

Date

 

 

 

By

/s/ James W. Young, Ph.D.

 

 

 

 

 

 

James W. Young, Ph.D.

 

 

 

 

 

Chief Executive Officer

 

28



 

Schedule 1.17

 

Patent Rights (1)

 

Country

 

Application No.
Entering Date

 

Patent No.
Patent Date

 

Expiry

 

Date Annuity
Paid(1)

 

Next
Annuity
Due Date

Argentina

 

950100147

 

3914

 

Nov. 13, 2015

 

 

 

 

 

(Nov.13, 1995)

 

July 6, 2001

 

 

 

 

 

Australia

 

25767/95

 

679,859

 

Jun. 6, 2015

 

 

 

 

 

Dec. 6, 1996

 

Oct. 30, 1997

 

 

 

 

 

Brazil

 

PI 9508037-6

 

PI9508037-6

 

Jun. 6, 2015

 

 

 

 

 

Dec. 16, 1996

 

Apr. 15, 2003

 

 

 

 

 

Canada

 

2,192,824

 

 

 

 

 

 

 

 

 

Dec. 12, 1996

 

 

 

 

 

 

 

 

China

 

95 194461.4

 

55440

 

Jun. 6, 2015

 

 

 

 

 

Jan. 31, 1997

 

Mar. 17, 2000

 

 

 

 

 

Czech

 

PV 3643/96

 

 

 

 

 

 

 

 

 

Dec. 11, 1996

 

 

 

 

 

 

 

 

EP

 

95 920265.6

 

787726

 

Jun. 6, 2015

 

 

 

 

 

Dec.12, 1996

 

Nov. 28, 2001

 

 

 

 

 

Austria

 

 

 

 

 

 

 

Apr.30, 2003

 

Jun.30, 2004

Belgium

 

 

 

 

 

 

 

Jun.18, 2003

 

Jun.30, 2004

Denmark

 

 

 

 

 

 

 

Jun.4, 2003

 

Jun.30, 2004

France

 

 

 

 

 

 

 

May 28, 2003

 

Jun.30, 2004

Germany

 

 

 

 

 

 

 

June 18, 2003

 

Jun.30, 2004

Greece

 

 

 

 

 

 

 

May 5, 2003

 

Jun.30, 2004

Ireland

 

 

 

 

 

 

 

May 20, 2003

 

Jun.30, 2004

Italy

 

 

 

 

 

 

 

Jun.12, 2003

 

Jun.30, 2004

Luxembourg

 

 

 

 

 

 

 

May 27, 2003

 

Jun.30, 2004

Monaco

 

 

 

 

 

 

 

Apr.29, 2003

 

Jun.30, 2004

Netherlands

 

 

 

 

 

 

 

Apr.29, 2003

 

Jun.30, 2004

Portugal

 

 

 

 

 

 

 

May 7, 2003

 

Jun.6, 2004

Spain

 

 

 

 

 

 

 

Jun.17, 2003

 

Jun.30, 2004

Sweden

 

 

 

 

 

 

 

Jun.4, 2003

 

Jun.30, 2004

Switzerland & Liechtenstein

 

 

 

 

 

 

 

Jun.10, 2003

 

Jun.30, 2004

UK

 

 

 

 

 

 

 

Jun.4, 2003

 

Jun.6, 2004

Latvia

 

 

 

 

 

 

 

Jun.20, 2003

 

Jun.6, 2004

Lithuania

 

 

 

 

 

 

 

May 6, 2003

 

Jun.6, 2004

Slovenia

 

 

 

 

 

 

 

Apr.29, 2003

 

Jun.6, 2004

Finland

 

96 5020

 

 

 

 

 

 

 

 

 

Dec. 13, 1996

 

 

 

 

 

Jun.10, 2003

 

Jun.30, 2004

 

29



 

Schedule 1.17

 

Patent Rights (2)

 

Country

 

Application No.
Entering Date

 

Patent No.
Patent Date

 

Expiry

 

Date
Annuity
Paid(1)

 

Next
Annuity
Due Date

Hong Kong

 

97 101948.5

 

1000495B

 

Jun. 6, 2015

 

 

 

June 6, 2006

 

(Oct. 17, 1997)

 

Jul. 19, 2002

 

 

 

 

Hungary

 

P 96 03455

 

220072

 

Jun. 6, 2015

 

May 9, 2003

 

June 6, 2006

 

Dec. 13, 1996

 

Oct. 29, 2001

 

 

 

Israel

 

115726

 

115726

 

Oct. 23, 2015

 

Oct.22, 2001

 

Oct.25, 2005

 

(Oct. 23, 1995)

 

Mar. 1, 2000

 

 

 

Korea

 

707029/1996

 

350921

 

Jun. 6, 2015

 

Aug.20, 2002

 

Aug.20, 2005

 

Dec. 9, 1996

 

Aug. 20, 2002

 

 

 

Mexico

 

96 6331

 

 

 

 

 

 

 

 

 

Dec. 11, 1996

 

 

 

 

 

 

 

 

New Zealand

 

287139

 

287139

 

Jun. 6, 2015

 

Apr.18, 2002

 

Jun.6, 2006

 

Dec. 5, 1996

 

Nov. 19, 1997

 

 

 

Norway

 

96.5305

 

307255

 

Jun. 6, 2015

 

Apr.29, 2003

 

Jun.30, 2006

 

Dec. 11, 1996

 

Mar. 6, 2000,

 

 

 

Pakistan

 

564/95

 

134,868

 

Oct. 23, 2011

 

Sep.1, 2003

 

Oct.23, 2004

 

(Oct. 23, 1995)

 

Oct. 23, 1997

 

 

 

Philippines

 

51621

 

 

 

 

 

 

 

 

 

(Nov. 2, 1995)

 

 

 

 

 

 

 

 

Poland

 

P 317726

 

 

 

Jun.6, 2015

 

May 5, 2003

 

June.6, 2005

 

Dec. 13, 1996

 

 

 

 

 

Romania

 

96-02349

 

 

 

Jun.6, 2015

 

Jul.30, 2003

 

June.6, 2006

 

Dec. 12, 1996

 

 

 

 

 

Russia

 

97 100718

 

2151770

 

Jun. 6, 2015

 

May 15, 2003

 

Jun.6, 2006

 

Jan. 13, 1997

 

Jun.27, 2000

 

 

 

Singapore

 

96 12283-3

 

37810

 

Jun. 6, 2015

 

May 26, 2003

 

Jun.6, 2006

 

Dec. 10, 1996?

 

Dec. 19, 1997

 

 

 

Slovakia

 

PV 1574/96

 

281341

 

Jun. 6, 2015

 

May 15, 2003

 

Jun.6, 2006

 

Dec. 6, 1996

 

Nov. 8, 2000

 

 

 

South Africa

 

95/9030

 

95/9030

 

Oct. 25, 2015

 

Sep.2, 2003

 

Oct.25, 2004

 

(Oct. 25, 1995)

 

Aug. 28, 1996

 

 

 

Taiwan

 

84 106000

 

90869

 

Jun. 12, 2015

 

Aug.28, 2003

 

Nov.10, 2004

 

(Jun. 13, 1995)

 

Mar. 18, 1998

 

 

 

 

30



 

Schedule 1.17

 

Patent Rights (3)

 

Country

 

Application No.
Entering Date

 

Patent No.
Patent Date

 

Expiry

 

Date Annuity
Paid(1)

 

Next
Annuity
Due Date

USA

 

08/765,232

 

5,817,669

 

Oct. 6, 2015

 

Mar.13, 2002

 

Apr.6 2006

 

Dec. 13, 1996

 

Oct. 6, 1998

 

 

 

Japan

 

8-501923 (2)

 

3391796

 

Jun. 6, 2015

 

Jan.10, 2003

 

Jan.24, 2006

 

Dec. 6, 1996

 

Jan. 24, 2003

 

 

 

 

8-351948 (3)

 

 

 

 

 

 

 

 

 

(Dec. 10, 1996)

 

 

 

 

 

 

 

 

 

10-173986 (4)

 

 

 

 

 

 

 

 

 

(Jun. 5, 1998)

 

 

 

 

 

 

 

 

 


PCT: WO 95/34559 (Filing Date: June 6, 1995)

(   ):  Filing date

Bold & Underlined: Granted

(1)    Place date annuity was paid here.

(2)    Basic Patent Application

(3)    Patent Application for a medical use

(4)    Patent Application for an intermediate

 

31



 

Schedule 6.02

 

Compounds available for supply

 

Code number

 

Chemical Structure

 

Available Quantity

AG-7352

 

 

[*]

[*]

 

[*]

 

[*]

[*]

 

[*]

 

[*]

 


[*]  Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

32



 

Schedule 6.03

 

Preliminary Development Plan (1)

 

Sunesis Pharmaceuticals, Inc. is planning to develop SPC-595 (AG-7352) for the treatment of human cancer.  SPC-595 is a novel cytotoxic drug of the naphthyridine chemical class, structurally related to the quinolone antibiotics.  It possesses anti-tumor activity in a large number of syngeneic and xenograft models.  The proposed mechanism of action has not been fully elucidated, although there is experimental evidence suggesting that the drug acts by arresting the cell cycle at the G2/M interface.

 

Phase I

Sunesis intends to conduct phase I clinical trials on two schedules in subjects with advanced solid tumors.  The phase II regimen (dose and schedule) will be selected based on the phase I results.

 

The first phase I study is likely to be designed as an open-label [*] study in which SPC-595 will be administered intravenously once every 21 days, for two cycles.  Drug doses will be administered to [*] of [*], and [*], using an [*] schema.

 

The second phase I study is likely to be designed as an open-label [*] study, in which SPC-595 will be administered [*] weekly times [*] weeks, for [*].  In this study, a cycle is defined as a 4-week period, with study drug administered on Days 0, 7, and 14 of each cycle, followed by at least 14 days of observation.  Initial dosing in this study will begin after preliminary safety and tolerability of SPC-595 has been evaluated in at least [*] in the first phase I study.

 

Phase II

The goal of the phase II program is to provide evidence of clinical activity and safety in a variety of tumor types.  At this time, Sunesis is planning to evaluate SPC-595 in different indications possibly including: [*].  The choice of tumor types in the phase II program will likely be based on a number of factors, including the compound’s [*] observed in [*], likely [*] to and [*] of [*], and the [*].  This phase II program will likely be modified based on the findings in the phase I studies.

 

If Sunesis chooses [*], the plan is to treat patients with [*] for [*] of SPC-595 therapy, [*] to treatment with a [*] regimen.  We would anticipate enrolling up to [*] and assess [*].

 


[*]  Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

33



 

If Sunesis chooses [*], the plan would be to conduct a [*], with enrollment of up to [*] patients who have [*] and [*] for their disease.  Approximately [*] would be enrolled in the [*], and would be administered [*] of SPC-595 therapy.  If there were any [*] observed, then an additional [*] would be [*].

 

Another choice for a phase Ib/II study could be first-line [*] of [*] with SPC-595 in [*] with [*].  In the phase Ib portion of the study patients would be administered [*] doses of [*] and [*] of SPC-595 to determine an optimal regimen for the phase II portion.  Patients would be followed to assess the [*].

 

Another potential indication for study would be [*].  In this phase Ib/II study, patients who [*] or have [*] would be enrolled and administered [*] of SPC-595 with the goal of [*].  The study would be expected to enroll up to [*], and if there was evidence of [*] in at least [*], the study could be expanded to approximately [*].

 

Phase III

The lead indication for a phase III trial will be contingent on the outcome of the phase II trial.  The trial design, size and duration of any phase III trial will depend on the specific indications and upon extensive discussions with treating physicians and members of the appropriate regulatory agencies.

 


[*]  Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

34



 

Schedule 6.05

 

Region

 

(i) Asia and Pacific Rim

 

Japan, Korea, North Korea, China (including Hong Kong and Macao), Taiwan, Thailand, Malaysia, Singapore, Philippines, Indonesia, East Timor, Brunei, Viet Nam, Laos, Cambodia, Myanmar, India, Pakistan, Bangladesh, Sri Lanka, Maldives, Nepal, Bhutan, Mongolia, Iran, Iraq, United Arab Emirates, Saudi Arabia, Bahrain, Kuwait, Qatar, Oman, Syria, Jordan, Lebanon, Palestine, Yemen, Israel, Afghanistan, Kazakhstan, Uzbekistan, Turkmenistan, Kyrgyz, Tajikistan, Australia, New Zealand, Papua New Guinea, Fiji, Kiribati, Marshall Islands, Micronesia, Nauru, Solomon Islands, Tonga, Tuvalu, Vanuatu, Samoa, Palau, Niue, Cook Islands

 

(ii) North America

 

United States of America (including Puerto Rico), Canada

 

(iii) Europe

 

United Kingdom, Spain, Portugal, France, Monaco, Andorra, Italy, Vatican, Malta, San Marino, Liechtenstein, Switzerland, Austria, Belgium, Netherlands, Luxembourg, Germany, Denmark, Sweden, Finland, Norway, Ireland, Iceland, Greece, Cyprus, Poland, Czech Republic, Slovakia, Hungary, Romania, Bulgaria, Croatia, Slovenia, Macedonia, Bosnia and Herzegovina, Serbia and Montenegro, Albania, Estonia, Latvia, Lithuania, Russia, Belarus, Ukraine, Azerbaijan, Armenia, Georgia, Moldova, Turkey

 

(iv) Latin America

 

Mexico, Guatemala, Belize, El Salvador, Honduras, Nicaragua, Costa Rica, Panama, Colombia, Venezuela, Guyana, Suriname, Ecuador, Peru, Brazil, Bolivia, Paraguay, Uruguay, Argentina, Chile, Jamaica, Cuba, Bahamas, Haiti, Dominican Republic, Saint Christopher and Nevis, Antigua and Barbuda, Dominica, Saint Lucia, Saint Vincent and the Grenadines, Trinidad and Tobago, Barbados, Grenada

 

(v) Other Countries

 

All the countries other than those set forth in (i), (ii), (iii) and (iv) above.

 

35



 

Schedule 9.03

 

Preliminary Sales Forecast

 

Preliminary Sales Forecast (U.S. $ Millions)

 

This forecast is based on the assumption that one of the potential Phase II programs in the Preliminary Development Plan is successfully pursued and results in a drug approval. The forecast is based on AG-7352 being used in first line [*] in [*] with  [*].

 

The worldwide market for [*] therapeutics in 2000 was:

 

 

 

2000

 

 

[*]

 

[*]

 

 

Other

 

34

 

 

Total

 

[*]

 

(source: Decision Resources)

 

Assumptions:

 

AG-7352 secures FDA approval for first-line [*] in 2011.

The market for therapeutics grows by [*]% per annum for all agents.

AG-7352 is priced similarly to [*].

 

 

 

2011

 

2012

 

2013

 

[*]

 

[*]

 

[*]

 

[*]

 

Other

 

59

 

62

 

65

 

Total

 

[*]

 

[*]

 

[*]

 

 

Percentage (%) of use of AG-7352 in [*] with [*] in [*]:

 

 

 

[*]

%

[*]

%

[*]

%

 

Sales of
AG-7352

 

[*]

 

[*]

 

[*]

 

 

Potential factors that could reduce this preliminary sales forecast:

Sales could be lower based on the likelihood that the indication will not be granted in all markets at the same time (in 2000, the U.S. market represented [*]% of worldwide [*] market).  Generic entries into this market could depress pricing and reduce penetration rates of new entities.  Time to new drug approval may be longer than indicated.

 


[*]  Certain information on this page has been redacted and filed separately with the Securities and Exchange Commission.  Confidential treatment has been requested with respect to the omitted portions.

 

36




Exhibit 10.38

 

SUNESIS PHARMACEUTICALS, INC.

 

STOCK PURCHASE AGREEMENT

 

This Stock Purchase Agreement (this “ Agreement ”) is entered into by and between Sunesis Pharmaceuticals, Inc., a Delaware corporation (the “ Company ”) and Bristol-Myers Squibb Company, a Delaware corporation (“ BMS ”), as of April 27, 2005.

 

RECITALS

 

WHEREAS, the Company and BMS have entered into that certain License Agreement effective as of April 27, 2005 (the “ License Agreement ”), pursuant to which the Company agreed to issue to BMS an aggregate of 1,666,667 shares (the “ Shares ”) of the Company’s Series C-2 Preferred Stock, par value $0.0001 per share (the “ Series C-2 Stock ”), in consideration of the grant by BMS to the Company of an exclusive worldwide license to BMS-387032 and other CDK inhibitor compounds covered under BMS patents.

 

AGREEMENT

 

NOW, THEREFORE, in consideration of the mutual covenants and obligations set forth herein, and for other good and valuable consideration, the receipt and sufficiency of which is hereby acknowledged, the Company and BMS agree as follows:

 

1.                                        Purchase and Sale of Preferred Stock .

 

1.1                                  The Company has adopted and filed with the Secretary of State of the State of Delaware the Eighth Amended and Restated Certificate of Incorporation in the form attached hereto as Exhibit A (the “ Restated Certificate ”), and the Series C-2 Stock has the rights, preferences and privileges described in the Restated Certificate.

 

1.2                                  The Company has, or will have before the Closing, authorized the sale and issuance of the Shares to BMS.  Upon the terms and subject to the conditions set forth in this Agreement, BMS agrees to purchase at the Closing, and the Company agrees to sell and issue to BMS at the Closing the Shares registered in the name of BMS at a purchase price of $4.80 per Share.  The execution of the License Agreement, and the granting of the exclusive License thereunder, shall constitute full payment of the purchase price by BMS.

 

2.                                        Closing, Delivery .

 

2.1                                  The purchase and sale of the Shares shall take place at the offices of Latham & Watkins LLP, 135 Commonwealth Drive, Menlo Park, California, at 10:00 a.m., on the date hereof, or at such other time and place as the parties shall agree upon (which time and place are designated as the “ Closing ”).

 

2.2                                  At the Closing of the sale of the Shares to BMS, the Company will deliver to BMS a certificate registered in the name of BMS for the Shares in exchange for the execution of the License Agreement, and the granting of the exclusive license thereunder.

 

1



 

3.                                        The Company’s Representations and Warranties .  Except as set forth in the Schedule of Exceptions attached hereto as Exhibit B , the Company represents and warrants to BMS as follows:

 

3.1                                  Organization and Standing; Restated Certificate and Bylaws .  The Company is a corporation duly organized and validly existing under, and by virtue of, the laws of the State of Delaware and is in good standing under such laws.  The Company has requisite corporate power and authority to own, lease or otherwise hold and to operate its properties and assets, and to carry on its business as currently conducted and as proposed to be conducted.  The Company is qualified to do business as a foreign corporation in all jurisdictions in which the failure to be so qualified would have a material adverse affect on the Company’s business, financial condition or results of operations.

 

3.2                                  Corporate Power .  The Company will have at the Closing all requisite legal and corporate power and authority to execute and deliver this Agreement and the Amendment to the Eighth Amended and Restated Investor Rights Agreement set forth as Exhibit C hereto (as amended, the “ Investor Rights Agreement ”), to sell and issue the Shares hereunder, to issue the Common Stock issuable upon conversion of the Shares and to carry out and perform its obligations under the terms of the Investor Rights Agreement.

 

3.3                                  Subsidiaries .  The Company has no subsidiaries or affiliated companies and does not otherwise own or control, directly or indirectly, any equity interest in any corporation, association or business entity.

 

3.4                                  Capitalization .  As of the Closing and immediately after giving effect to the sale of any of the Shares pursuant to the terms of this Agreement:

 

(a)                                   the authorized capital stock of the Company will consist of:

 

(A)                               110,000,000 shares of common stock, par value $0.0001 per share (the “ Common Stock ”), of which 5,989,999 shares will be issued and outstanding and 7,349,017 shares will be issuable upon the exercise of outstanding options and warrants to purchase Common Stock (“ Option Stock ”); and

 

(B)                                 38,582,000 shares of Preferred Stock, par value $0.0001 per share, consisting of (1) 8,682,000 shares designated as Series A Preferred Stock, of which 8,467,500 shares will be issued and outstanding and 42,755 shares will be reserved for issuance upon exercise of outstanding warrants to purchase Series A Preferred Stock (“ Series A Warrants ”), (2) 10,600,000 shares designated as Series B Preferred Stock, of which 9,690,771 shares will be issued and outstanding and 77,506 shares will be reserved for issuance upon exercise of outstanding warrants to purchase Series B Preferred Stock (“ Series B Warrants ”), (3) 13,250,000 shares designated as Series C Preferred Stock, of which 12,500,000 will be issued and outstanding and 489,750 shares reserved for issuance upon exercise of outstanding warrants to purchase Series C Preferred Stock (“ Series C Warrants ”), (4) 1,250,000 shares designated as Series C-1 Preferred Stock, all of which will be issued and outstanding and (5) 4,800,000 shares designated as Series C-2 Stock, 4,583,334 of which will be issued and outstanding.

 

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(b)                                  all issued and outstanding shares of capital stock of the Company are duly authorized, validly issued, fully paid and nonassessable, have been, or, when issued and paid for in compliance with the provisions of this Agreement, will be issued in compliance with all federal and state securities laws, and were not, or will not be, issued in violation of or subject to any preemptive or similar rights; and

 

(c)                                   except as otherwise set forth in this Section 3.4 and the rights of first refusal set forth in the Investor Rights Agreement, the Company will not have outstanding any stock or other securities convertible into or exchangeable for any shares of capital stock of the Company, any rights to subscribe for or to purchase or any options for the purchase of, or any agreements providing for the issuance, repurchase or redemption (contingent or otherwise) of any capital stock, or any stock or securities convertible into or exchangeable for any capital stock of the Company other than the Series A Warrants, Series B Warrants, Series C Warrants and options and warrants to purchase the Option Stock.

 

3.5                                  Authorization; Binding Effect .  All corporate action on the part of the Company, its officers, directors and stockholders necessary for the authorization, execution, delivery and performance of this Agreement and the Investor Rights Agreement by the Company, the authorization, sale, issuance and delivery of the Shares and the performance of all of the Company’s obligations under this Agreement and the Investor Rights Agreement has been taken or will be taken prior to the Closing.  This Agreement and the Investor Rights Agreement, when executed and delivered by the Company, shall constitute valid and binding obligations of the Company, enforceable in accordance with their terms.  The Shares are duly authorized and, when issued in compliance with the provisions of this Agreement, will be validly issued and will be fully paid and nonassessable.  The shares of Common Stock issuable upon conversion of the Shares in accordance with the Restated Certificate will be duly authorized, validly issued, fully paid and non-assessable.  The Shares of Series C-2 Stock will have the rights, preferences and privileges described in the Restated Certificate.  The Shares will be free of any liens or encumbrances other than any liens or encumbrances created by or imposed upon the holder; provided, however, that the Shares may be subject to restrictions on transfer under state and/or federal securities laws as set forth herein.

 

3.6                                  Labor Agreements and Actions .  The Company is not bound by or subject to (and none of its assets or properties is bound by or subject to) any written or oral, express or implied, contract, commitment or arrangement with any labor union, and no labor union has requested or, to the knowledge of the Company, has sought to represent any of the employees, representatives or agents of the Company.  There is no strike or other labor dispute involving the Company pending, or to the knowledge of the Company threatened, that could have a material adverse effect on the assets, properties, financial condition, operating results, or business of the Company, nor is the Company aware of any labor organization activity involving its employees.  The Company is not aware that any officer or key employee, or that any group of key employees, intends to terminate their employment with the Company, nor does the Company have a current intention to terminate the employment of any of the foregoing.  The employment by the Company of each officer, and each employee of the Company is not party to any employment agreement with the Company or, to the knowledge of the Company with any other person, and is terminable at the will of the Company.

 

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3.7                                  Agreements; Action .

 

(a)                                   Except for agreements explicitly contemplated hereby, there are no agreements, understandings or proposed transactions between the Company and any of its officers, directors, or any affiliate thereof nor are there agreements or understandings between any person and/or entities, which affect or relate to the voting or giving of written consents with respect to any security or by a director of the Company.

 

(b)                                  There are no agreements, understandings, instruments, contracts, proposed transactions, judgments, orders, writs or decrees to which the Company is a party or by which it is bound which may involve (i) obligations (contingent or otherwise) of, or payments to the Company in excess of, $50,000, or (ii) the license of any patent, copyright, trade secret or other proprietary right to or from the Company or (iii) provisions restricting or affecting the development, manufacture or distribution of the Company’s products or services or (iv) indemnification by the Company with respect to infringements of proprietary rights.

 

(c)                                   The Company has not (i) declared or paid any dividends, or authorized or made any distribution upon or with respect to any class or series of its capital stock, (ii) made any loans or advances to any person, other than ordinary advances for travel expenses, or (iii) sold, exchanged or otherwise disposed of any of its assets or rights, other than the sale of its inventory in the ordinary course of business or (iv) incurred any indebtedness for money borrowed or incurred any other liabilities individually in excess of $50,000 or collectively in excess of $150,000.

 

(d)                                  For the purposes of subsections (b) and (c) above, all indebtedness, liabilities, agreements, understandings, instruments, contracts and proposed transactions involving the same person or entity (including persons or entities the Company has reason to believe are affiliated therewith) shall be aggregated for the purpose of meeting the individual minimum dollar amounts of such subsections.

 

(e)                                   The Company is not a party to and is not bound by any contract, agreement or instrument, or subject to any restriction under its Restated Certificate or Bylaws, that adversely affects its business as now conducted or as proposed to be conducted, its properties or its financial condition.

 

(f)                                     The Company has not engaged in the past three months in any discussion (i) with any representative of any corporation or corporations regarding the merger of the Company with or into any such corporation or corporations, (ii) with any representative of any corporation, partnership, association or other business entity or any individual regarding the sale, conveyance or disposition of all or substantially all of the assets of the Company or a transaction or series of related transactions in which more than fifty percent of the voting power of the Company would be disposed of, or (iii) regarding any other form of liquidation, dissolution or winding up of the Company.

 

3.8                                  Title .  The Company has good and marketable title to its properties and assets and has good title to all its leasehold interests, in each case subject to no mortgage, pledge, lien, lease, encumbrance or charge, other than (i) the lien of current taxes not yet due and payable

 

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and (ii) liens and encumbrances which do not in any case materially detract from the value of the property subject thereto or materially impair the operations of the Company, and which have not arisen otherwise than in the ordinary course of business.

 

3.9                                  Compliance with Other Instruments .  The Company is not in violation or default of any term of its Restated Certificate or Bylaws, or of any term or provision of any material mortgage, indebtedness, indenture, contract, agreement, instrument, judgment, order or decree, and is not in violation of any statute, rule or regulation applicable to the Company where such violation would have a material adverse effect on the assets, properties, financial condition, operating results or business of the Company.  The execution, delivery and performance of and compliance with the Agreement, and the issuance of the Shares, has not resulted and will not result in any material violation of, or conflict with, or constitute with or without the passage of time and the giving of notice a material violation or default under, the Company’s Restated Certificate or Bylaws or any of its agreements having a value in excess of $50,000, nor result in the creation of any mortgage, pledge, lien, encumbrance or charge upon any of the properties or assets of the Company.  To its knowledge, the Company has avoided every condition, and has not performed any act, the occurrence of which would result in the Company’s loss of any material right granted under any material license, distribution agreement or other agreement.

 

3.10                            Litigation .  There are no actions, suits, proceedings or investigations pending against the Company or its properties before any court or governmental agency (nor, to the Company’s knowledge, is there any reasonable basis therefor or threat thereof).  The foregoing includes, without limitation, actions pending or threatened (or any reasonable basis therefor known to the Company) involving the prior employment of any of the Company’s employees or consultants, their use in connection with the Company’s business of any information or techniques allegedly proprietary to any of their former employers or their obligations under any agreement with their former employers.  The Company is not a party or subject to the provisions of any order, writ, injunction, judgment or decree of any court or government agency or instrumentality.  There is no action, suit, proceeding or investigation by the Company currently pending or which the Company intends to initiate.

 

3.11                            Employees .  To the Company’s knowledge, no employee or consultant of the Company is in violation of any term of any employment contract, patent disclosure agreement or any other contract or agreement relating to the relationship of such employee with the Company or any other party because of the nature of the business conducted or to be conducted by the Company.

 

3.12                            Registration Rights; Voting Rights .  Except as set forth in the Investor Rights Agreement, the Company is not under any contractual obligation to register any of its currently outstanding securities or any of its securities that may hereafter be issued.  To the Company’s knowledge, no stockholders of the Company have entered into any agreement with respect to the voting of capital shares.

 

3.13                            Governmental Consent, etc.   No consent, approval or authorization of or designation, declaration or filing with any governmental authority on the part of the Company is required in connection with the valid execution and delivery of this Agreement, or the offer, sale or issuance of the Shares, or the consummation of any other transaction contemplated hereby,

 

5



 

except qualification (or taking such action as may be necessary to secure an exemption from qualification, if available) of the offer and sale of the Shares under the California Corporate Securities Law of 1968, as amended, and applicable Blue Sky laws, which filings and qualifications, if required, will be accomplished in a timely manner.

 

3.14                            Offering .  Subject to the accuracy of BMS’s representations in Section 4 hereof, the offer, sale and issuance of the Shares to be issued in conformity with the terms of this Agreement and the issuance of the Common Stock to be issued upon conversion of the Shares constitute transactions exempt from the registration requirements of Section 5 of the Securities Act of 1933, as amended (the “ Securities Act ”), and in compliance with applicable state securities laws.

 

3.15                            Brokers or Finders; Other Offers .  The Company has not incurred, and will not incur, directly or indirectly, as a result of any action taken by the Company, any liability for brokerage or finders’ fees or agents’ commissions or any similar charges in connection with this Agreement.

 

3.16                            Patents and Trademarks .  The Company has sufficient title to and ownership of or rights to or is in the process of acquiring the rights to all patents, trademarks, service marks, trade names, copyrights, trade secrets, information, proprietary rights and processes necessary for its business as now conducted and, to its knowledge, as proposed to be conducted.  A true and complete list of such intellectual property is set forth on Schedule 3.16 hereto (the “ Company IP ”).  To the Company’s knowledge, the Company IP does not conflict with or infringe upon the rights of any other person or entity.  The Company has not entered into any options, licenses, sublicenses or entered into any agreements of any kind with respect to any of the intellectual property owned by, licensed to or otherwise controlled by the Company and has not encumbered the intellectual property of the Company in any way.  The Company has not received any communications alleging that the Company has violated or, by conducting its business as proposed, would violate any of the patents, trademarks, service marks, trade names, copyrights or trade secrets or other proprietary rights of any other person or entity.  The Company is not aware that any of its employees is obligated under any contract (including licenses, covenants or commitments of any nature) or other agreement, or subject to any judgment, decree or order of any court or administrative agency, that would interfere with the use of such employee’s best efforts to promote the interests of the Company or that would conflict with the Company’s business as now conducted or as proposed to be conducted.  Neither the execution nor delivery of this Agreement or the Investor Rights Agreement, nor the carrying on of the Company’s business by the employees of the Company, nor the conduct of the Company’s business as proposed, will, to the Company’s knowledge, conflict with or result in a breach of the terms, conditions or provisions of, or constitute a default under, any contract, covenant or instrument under which any of such employees are now obligated.  The Company does not believe it will be necessary to utilize any inventions of any of the Company’s employees (or people it currently intends to hire) made prior to their employment by the Company which are not currently licensed to or owned by the Company.

 

3.17                            Obligations to Related Parties .  There are no obligations of the Company to officers, directors, stockholders or employees of the Company other than (a) for payment of salary for services rendered, (b) reimbursement for reasonable expenses incurred on behalf of the

 

6



 

Company and (c) for other standard employee benefits made generally available to employees.  None of the officers, directors or stockholders of the Company, or any members of their immediate families, are indebted to the Company (other than in connection with purchases of the Company’s stock) or have any direct or indirect ownership interest in any firm or corporation with which the Company is affiliated or with which the Company has a business relationship, or any firm or corporation which competes with the Company, except that officers, directors and/or stockholders of the Company may own stock in publicly traded companies which may compete with the Company.  No officer, director or stockholder, or to the Company’s knowledge any member of their immediate families, is, directly or indirectly, interested in any material contract with the Company (other than such contracts as relate to any such person’s ownership of capital stock or other securities of the Company).  The Company is not a guarantor or indemnitor of any indebtedness of any other person, firm or corporation.

 

3.18                            Disclosure .  This Agreement and the Investor Rights Agreement and all other certificates and documents delivered in connection herewith, when taken as a whole, do not contain any untrue statement of a material fact or omit to state a material fact necessary in order to make the statements contained herein not misleading in light of the circumstances under which they were made.  The Company has provided BMS with all the information BMS has requested for deciding whether to purchase the Shares.

 

3.19                            Employee Benefit Plans .  The Company does not have any Employee Benefit Plan as defined in the Employee Retirement Income Security Act of 1974.

 

3.20                            Taxes .  (a) The Company has paid all federal, state, county, local, foreign and other taxes, including, without limitation, income taxes, estimated taxes, excise taxes, sales taxes, use taxes, gross receipts taxes, franchise taxes, employment and payroll related taxes, property taxes and import duties, whether or not measured in whole or in part by net income (hereinafter, “ Taxes ” or, individually, a “ Tax ”) which have come due and are required to be paid by it through the date hereof, and all deficiencies or other additions to Tax interest and penalties award by it in connection with any such Taxes, other than Taxes being disputed by the Company in good faith for which adequate reserves have been made in accordance with United States generally accepted accounting principles (“ GAAP ”); (b) the Company has timely filed or caused to be filed all returns for Taxes that it is required to file on and through the date hereof (including all applicable extensions), and all such Tax returns are accurate and complete in all material respects, (c) with respect to all Tax returns of the Company, (i) there is no unassessed Tax deficiency proposed or, to the knowledge of the Company, threatened against the Company and (ii) no audit is in progress with respect to any return for Taxes, no extension of time is in force with respect to any date on which any return for Taxes was or is to be filed and no waiver or agreement is in force for the extension of time for the assessment or payment of any Tax; (d) all provisions for Tax liabilities of the Company with respect to the Financial Statements (as defined below) have been made in accordance with GAAP consistently applied, and all liabilities for Taxes of the Company attributable to periods prior to or ending on the date hereof have been adequately provided for on the Financial Statements; and (e) there are no liens for Taxes on the assets of the Company.

 

3.21                            Proprietary Information and Inventions Agreements .  Each employee, consultant and officer of the Company has executed an agreement with the Company regarding

 

7



 

confidentiality and proprietary information.  The Company, after reasonable investigation, is not aware that any of its employees or consultants is in violation thereof, and the Company will use its reasonable best efforts to prevent any such violation.  All consultants to or vendors of the Company with access to confidential information of the Company are parties to a written agreement under which, among other things, each such consultant or vendor is obligated to maintain the confidentiality of confidential information of the Company.  The Company is not aware that any of its consultants or vendors is in violation thereof, and the Company will use its reasonable best efforts to prevent any such violation.

 

3.22                            Permits The Company has all franchises, permits, licenses and any similar authority necessary for the conduct of its business as now being conducted by it, the lack of which could materially and adversely affect the business, properties, prospects, or financial condition of the Company and believes, after reasonable investigation, that it can obtain, without undue burden or expense, any similar authority for the conduct of its business as planned to be conducted.  The Company is not in default in any material respect under any of such franchises, permits, licenses or other similar authority.

 

3.23                            Corporate Documents .  The Restated Certificate and Bylaws of the Company are in the form made available to BMS.  The copy of the minute books of the Company made available to BMS, contains minutes of all meetings of directors and stockholders and all actions by written consent without a meeting by the directors and stockholders since the date of incorporation and reflects all actions by the directors (and any committee of directors) and stockholders with respect to all transactions referred to in such minutes accurately in all material respects.

 

3.24                            Real Property Holding Corporation .  The Company is not a United States real property holding corporation within the meaning of the Internal Revenue Code Section 897(c)(2) and any regulations promulgated thereunder.

 

3.25                            Insurance .  The Company maintains with financially sound and reputable insurers, insurance with respect to its properties and business against such casualties and contingencies, of such types (including, without limitation, errors and omissions coverage), on such terms and in such amounts (including deductibles, co-insurance and self-insurance, if adequate reserves are maintained with respect thereto) as are customary in the case of similarly situated entities engaged in a similar business.

 

3.26                            Financial Statements .  The Company has made available to BMS its audited financial statements (including balance sheet, income statement and statement of cash flows) for the years ended December 31, 2004, December 31, 2003 and December 31, 2002 (collectively, the “ Financial Statements ”).  The Financial Statements have been prepared in accordance with generally accepted accounting principles applied on a consistent basis throughout the periods indicated.  The Financial Statements fairly present the financial condition and operating results of the Company as of the dates, and for the periods, indicated therein.  Except as set forth in the Financial Statements, the Company has no material liabilities, contingent or otherwise, other than (i) liabilities incurred in the ordinary course of business subsequent to December 31, 2004 and (ii) obligations under contracts and commitments incurred in the ordinary course of business and not required under generally accepted accounting

 

8



 

principles to be reflected in the Financial Statements, which, in both cases, individually or in the aggregate are not material to the financial condition or operating results of the Company.

 

3.27                            Investment Company .  The Company is not and is not controlled by or affiliated with an “investment company” within the meaning of the Investment Company Act of 1940, as amended.

 

4.                                        Representation and Warranties of BMS .  BMS represents and warrants to the Company as follows:

 

4.1                                  This Agreement and the Investor Rights Agreement each constitute BMS’s valid and legally binding obligation, enforceable in accordance with its terms.

 

4.2                                  BMS is purchasing the Shares for its own account for investment purposes only and not with a view to, or for resale in connection with, any “distribution” thereof for purposes of the Securities Act of 1933, as amended (the “ Securities Act ”).  BMS understands that the Shares have not been registered under the Securities Act or any applicable state securities laws by reason of a specific exemption therefrom that depends upon, among other things, the bona fide nature of the investment intent as expressed herein.

 

4.3                                  BMS has discussed the Company and its plans, operations and financial condition with the Company’s officers and has received all such information as BMS deems necessary and appropriate to enable it to evaluate the financial risk inherent in making an investment in the Shares.  BMS has received satisfactory and complete information concerning the business and financial condition of the Company in response to BMS’s inquiries.

 

4.4                                  BMS realizes that the purchase of the Shares will be a highly speculative investment.  BMS is able, without impairing BMS’s financial condition, to hold the Shares for an indefinite period of time and to suffer a complete loss of BMS’s investment.  BMS recognizes that the Company has a limited financial and operating history and the investment in the Company involves substantial risks.  BMS understands all of the risks related to the purchase of the Shares.  By virtue of BMS’s experience in evaluating and investing in private placement transactions of securities in companies similar to the Company, BMS is capable of evaluating the merits and risks of BMS’s investment in the Company and has the capacity to protect BMS’s own interests.

 

4.5                                  BMS understands that the Shares must be held indefinitely unless subsequently registered under the Securities Act or unless an exemption from registration is otherwise available.  Moreover, BMS understands that the Company is under no obligation to register the Shares except as otherwise provided in the Investor Rights Agreement.  BMS is aware of Rule 144 promulgated under the Securities Act, which permits limited resale of securities purchased in a private placement subject to the satisfaction of certain conditions.  BMS understands that the Shares will be imprinted with a legend that prohibits the transfer of the Shares unless they are registered or such registration is not required in the opinion of counsel reasonably satisfactory to the Company.

 

4.6                                  BMS represents that it is an “accredited investor” as such term is defined in Rule 501(a) of Regulation D promulgated under the Securities Act.

 

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4.7                                  BMS understands that while management forecasts, if any, were made in good faith, such forecasts may be inaccurate and operating results could differ dramatically and materially from the results forecast by management.

 

5.                                        Conditions to Closing of BMS .  BMS’s obligations to purchase the Shares at the Closing are, at the option of BMS, subject to (i) the execution and delivery of the License Agreement by the Company, (ii) the execution and delivery by the Company, BMS and the other parties thereto of the Investor Rights Agreement, (iii) the satisfaction or waiver by the Company of all covenants, agreements, obligations and conditions under the License Agreement that are required to be performed or complied with by it on or before the effectiveness of such agreement, (iv) the truthfulness of the Company’s representations and warranties set forth in Section 3 hereof and (v) the receipt of an opinion from Latham & Watkins LLP, special counsel to the Company, in substantially the form of Exhibit D .

 

6.                                        Conditions to Closing of the Company .  The Company’s obligations to issue and sell the Shares at the Closing are, at the option of the Company, subject to (i) the execution and delivery of the License Agreement by BMS, (ii) the execution and delivery by the Company, BMS and the other parties thereto of the Investor Rights Agreement, (iii) the satisfaction or waiver by BMS of all covenants, agreements, obligations and conditions under the License Agreement that are required to be performed or complied with by it on or before the effectiveness of such agreement and (iv) the truthfulness of the BMS’s representations and warranties set forth in Section 4 hereof.

 

7.                                        Miscellaneous .

 

7.1                                  Governing Law .  This Agreement and all acts and transactions pursuant hereto and the rights and obligations of the parties hereto shall be governed, construed and interpreted in accordance with the laws of the State of California, without giving effect to its principles of conflicts of law or choice of law.

 

7.2                                  Survival .  The representations and warranties contained herein shall survive the execution and delivery of this Agreement and the sale of the Shares.

 

7.3                                  Successors and Assigns .  The terms and conditions of this Agreement shall inure to the benefit of and be binding upon the respective successors and assigns of the parties as are permitted by this Agreement.  Nothing in this Agreement, express or implied, is intended to confer upon any party other than the parties hereto or their respective successors and permitted assigns any rights, remedies, obligations, or liabilities under or by reason of this Agreement, except as expressly provided in this Agreement.

 

7.4                                  Entire Agreement .  This Agreement, the License Agreement and the Investor Rights Agreement embody the entire understanding and agreement between BMS and the Company regarding the subject matter hereto and thereto, and supersede all prior agreements and understandings relating to the subject matter hereof and thereof.

 

7.5                                  Counterparts .  This Agreement may be executed in any number of counterparts and signatures and may be delivered by facsimile, each of which shall be

 

10



 

enforceable against the parties actually executing such counterparts, and all of which together shall constitute one instrument.

 

7.6                                  Expenses .  The Company and BMS shall each bear their own legal and other expenses in connection with the transactions contemplated hereby.

 

7.7                                  Notices, etc.   All notices and other communications required or permitted hereunder shall be effective upon receipt and shall be in writing and may be delivered in person, by telecopy, electronic mail, overnight delivery service or U.S. mail, addressed (a) if to BMS, at its address set forth on the signature page of this Agreement, or at such other address as BMS shall have furnished the Company in writing, or (b) if to the Company, at the address of its principal office, or at such other address as the Company shall have furnished to BMS in writing.

 

7.8                                  California Corporate Securities Law .  THE SALE OF THE SECURITIES WHICH ARE THE SUBJECT OF THIS AGREEMENT HAS NOT BEEN QUALIFIED WITH THE COMMISSIONER OF CORPORATIONS OF THE STATE OF CALIFORNIA AND THE ISSUANCE OF SUCH SECURITIES OR THE PAYMENT OR RECEIPT OF ANY PART OF THE CONSIDERATION THEREFOR PRIOR TO SUCH QUALIFICATION IS UNLAWFUL, UNLESS THE SALE OF SECURITIES IS EXEMPT FROM THE QUALIFICATION BY SECTION 25100, 25102, OR 25105 OF THE CALIFORNIA CORPORATIONS CODE.  THE RIGHTS OF ALL PARTIES TO THIS AGREEMENT ARE EXPRESSLY CONDITIONED UPON SUCH QUALIFICATION BEING OBTAINED UNLESS THE SALE IS SO EXEMPT.

 

7.9                                  Titles and Subtitles .  The titles of the paragraphs and subparagraphs of this Agreement are for convenience of reference only and are not to be considered in construing this Agreement.

 

7.10                            Amendments and Waivers .  Any term of this Agreement may be amended or waived (either generally or in a particular instance and either retroactively or prospectively) only with the written consent of the Company and BMS.  Any amendment or waiver effected in accordance with this Section 7.10 shall be binding upon BMS and each transferee of the Shares (or the Common Stock issuable upon conversion thereof), each future holder of all such securities, and the Company.

 

7.11                            Severability .  If one or more provisions of this Agreement are held to be unenforceable under applicable law, the parties agree to renegotiate such provision in good faith.  In the event that the parties cannot reach a mutually agreeable and enforceable replacement for such provision, then (a) such provision shall be excluded from this Agreement, (b) the balance of the Agreement shall be interpreted as if such provision were so excluded and (c) the balance of the Agreement shall be enforceable in accordance with its terms.

 

( Signature Page Follows )

 

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The parties have executed this Stock Purchase Agreement as of the date first written above.

 

 

COMPANY:

BMS:

 

 

 

 

 

 

 

 

SUNESIS PHARMECEUTICALS, INC.

BRISTOL-MYERS SQUIBB COMPANY

 

 

 

 

 

 

 

 

/s/ Daniel N. Swisher, Jr.

 

/s/ Tamar D. Howson

 

Name:

Daniel N. Swisher, Jr.

Name:

Tamar D. Howson

Title:

Chief Executive Officer

Title:

Sr. VP Corporate and Business Development

Address:

341 Oyster Point Blvd.

Address:

345 Park Avenue

 

South San Francisco, CA 94080

 

New York, New York 10154

Fax:

(650) 266-3501

 

 

 

 

SIGNATURE PAGE TO STOCK PURCHASE AGREEMENT

 



 

EXHIBITS

 

Exhibit A -                                         Eighth Amended and Restated Certificate of       Incorporation

 

Exhibit B -                                           Schedule of Exceptions to Representations and Warranties

 

Exhibit C -                                           Form of Amendment to Eighth Amended and Restated Investor Rights Agreement

 



 

EXHIBIT A

 

EIGHTH AMENDED AND RESTATED
CERTIFICATE OF INCORPORATION

 

[See Exhibit 3.1 to this Registration Statement]

 



 

EXHIBIT B

 

SCHEDULE OF EXCEPTIONS TO
REPRESENTATIONS AND WARRANTIES

 



 

EXHIBIT C

 

FORM OF AMENDMENT TO EIGHTH AMENDED AND RESTATED
INVESTOR RIGHTS AGREEMENT

 

[See Exhibit 10.39 to this Registration Statement]

 



 

EXHIBIT D

 

FORM OF OPINION OF LATHAM & WATKINS LLP

 

1.                                        The Company is a corporation under the General Corporation Law of the State of Delaware, with corporate power and authority to enter into the Documents and perform its obligations thereunder.  Based on certificates from public officials, we confirm that the Company is validly existing and in good standing under the laws of the State of Delaware and is qualified to do business in the State of California.

 

2.                                        The execution, delivery and performance of the Documents have been duly authorized by all necessary corporate action of the Company, and the Documents have been duly executed and delivered by the Company.

 

3.                                        Each of the Documents is a legally valid and binding agreement of the Company, enforceable against the Company in accordance with its terms.

 

4.                                        The execution, delivery and performance of the Documents by the Company and the issuance and sale of the Share pursuant to the Stock Purchase Agreement on the date hereof do not:

 

(i)                                      violate the Governing Documents; or

 

(ii)                                   violate the DGCL or any federal statute, rule or regulation applicable to the Company.

 

5.                                        The Shares have been duly authorized by all necessary corporate action of the Company, and, when issued and delivered against payment therefor pursuant to the Stock Purchase Agreement, will be validly issued, fully paid and nonassessable.  The shares of Common Stock issuable upon conversion of the Shares (the “Conversion Shares”) have been duly and validly reserved and, when issued in compliance with the provisions of the Governing Documents, will be validly issued, fully paid and nonassessable.  The issuance of the Shares and the Conversion Shares is not subject to any preemptive rights set forth in the Governing Documents or, to our knowledge and except as set forth in the Schedule of Exceptions to the Purchase Agreement or except as such that have been satisfied or waived, any rights of first refusal, options, warrants, conversion rights, agreements or other rights for the purchase or acquisition from the Company of any authorized but unissued shares of capital stock of the Company.

 

6.                                        Assuming the truthfulness of the representations of the Purchaser set forth in the Purchase Agreement, the Shares, upon issuance and delivery and payment therefor in the manner described in the Purchase Agreement, will be issued in a transaction exempt from the registration requirements of the Securities Act of 1933, as amended.

 

For purposes of the foregoing, (a) ”Documents” means this Agreement, the Investor Rights Agreement and the Amendment to Eighth Amended and Restated Investor Rights

 



 

Agreement and (b) ”Governing Documents” means the Eighth Amended and Restated Certificate of Incorporation and the Amended Bylaws of Sunesis.  The opinion will be subject to customary limitations and qualifications.

 




Exhibit 10.39

 

SUNESIS PHARMACEUTICALS, INC.

 

AMENDMENT TO EIGHTH AMENDED AND RESTATED
INVESTOR RIGHTS AGREEMENT

 

This Amendment (the “ Amendment ”) to the Eighth Amended and Restated Investor Rights Agreement dated August 30, 2004 (the “ Agreement ”) is entered into as of April 27, 2005 by and among Sunesis Pharmaceuticals, Inc., a Delaware corporation (the “ Company ”), Bristol-Myers Squibb Company (“ BMS ”) and the parties to the Agreement set forth on the signature pages hereto (the “ Prior Investors ”).  The Prior Investors and BMS are collectively referred to hereinafter as the “ Investors ” and each individually as an “ Investor .”  Capitalized terms used herein without definition have the meanings given to such terms in the Agreement.

 

RECITALS

 

A.                                    The Prior Investors hold shares of the Company’s Warrant Stock, Series A Preferred Stock, Series B Preferred Stock, Series C Preferred Stock, Series C-1 Preferred Stock and/or Series C-2 Preferred Stock (“ Shares ”) and possess registration and other rights pursuant to the Agreement;

 

B.                                      The Company proposes to sell and issue shares of Series C-2 Preferred Stock to BMS pursuant to a Stock Purchase Agreement, dated as of the date hereof (the “ Purchase Agreement ”);

 

C.                                      As a condition of entering into the Purchase Agreement, BMS has requested that the Company extend to it registration rights, information rights and other rights as set forth in the Agreement.

 

D.                                     Pursuant to Section 8.1 of the Agreement, with the written consent of the Company and the record holders of more than seventy percent (70%) of the Registrable Securities, including at least three Investors that are not affiliated with each other, any term of the Agreement may be amended and the obligations of the Company and the rights of the other parties to this Agreement may be waived (either generally or in a particular instance, either retroactively or prospectively and either for a specified period of time or indefinitely).

 

E.                                       The Prior Investors are the record holders of more than seventy percent (70%) of the Registrable Securities, and the Company and the Prior Investors desire to amend the Agreement to provide BMS with the rights pursuant to the Agreement.

 

AGREEMENT

 

NOW, THEREFORE , in consideration of the mutual promises and for other good and valuable consideration, the receipt and sufficiency of which are hereby acknowledged, the parties hereto agree as follows:

 

1.                                        Status as Investor .  The Prior Investors, the Company and BMS hereby agree that BMS shall be considered an “ Investor ” for all purposes of the Agreement, and Exhibit A of the Agreement shall be amended to include BMS.  The Company and the Prior Investors hereby

 



 

adopt this Amendment and acknowledge and agree that BMS shall be entitled to the rights and subject to the obligations of an “Investor” pursuant to the Agreement.

 

2.                                        Securities Acquired by BMS .  The Prior Investors, the Company and BMS hereby agree that (i) all securities of the Company now or hereafter acquired by BMS pursuant to the Purchase Agreement or the License Agreement, dated as of April       , 2005 (as amended from time to time, the “ License Agreement ”), by and between the Company and BMS shall be bound by and subject to the terms of the Agreement, (ii) all shares of Common Stock (including all shares of Common Stock issuable upon the conversion of shares of Preferred Stock or any other securities of the Company now or hereafter acquired by BMS pursuant to the Purchase Agreement or the License Agreement) now or hereafter acquired by BMS pursuant to the Purchase Agreement or the License Agreement shall constitute Registrable Securities for purposes of the Agreement and (iii) without the prior written consent of a Holder, the number of Registrable Securities held by such Holder that shall be included in an underwritten offering pursuant to Section 3.1(b) of the Agreement shall not be less than the proportionate share of such Registrable Securities requested by such Holder to be included in such underwritten offering.  BMS hereby adopts the Agreement, including this Amendment, with the same force and effect as if BMS were originally a party thereto.

 

3.                                        Additional Agreements of the Company .

 

(a)                                   S-3 Eligibility .  Upon completion of the Company’s initial public offering, the Company shall use commercially reasonable efforts to become eligible for, and maintain eligibility for, use of Form S-3 or such other comparable short form registration statement as then available pursuant to the rules and regulations promulgated by the Commission.

 

(b)                                  Additional Registration Procedures .  In the case of each registration, qualification or compliance effected by the Company pursuant to Section 3 of the Agreement, in addition to the Company’s obligations under Section 3.5 of the Agreement, the Company shall

 

(i)                                      notify each Holder of Registrable Securities covered by such registration statement of (x) the issuance by the Commission of any stop order suspending the effectiveness of such registration statement or the institution or threatening of any proceeding for that purpose or (y) the receipt by the Company of any notification with respect to the suspension of the qualification of the securities being offered for sale in any jurisdiction or the institution or threatening of any proceeding for such purpose;

 

(ii)                                   use commercially reasonable efforts to prevent the issuance of any order suspending the effectiveness of the registration statement or the qualification of the securities being offered for sale in any jurisdiction and, if issued, to obtain as soon as reasonably practicable the withdrawal thereof;

 

(iii)                                upon the occurrence of any event contemplated by Section 3.5(g) of the Agreement, promptly prepare a post effective amendment to the registration statement or an amendment or supplement to the related prospectus or file any other required document so that, as thereafter delivered to the Holders of Registrable Securities included therein, the prospectus will not include an untrue statement of material fact or omit to state any material fact

 

2



 

required to be stated therein or necessary to make the statements therein not misleading in light of the circumstances under which they were made; and

 

(iv)                               as soon as reasonably practicable, but not later than the Availability Date (as defined below), make generally available to its securityholders an earning statement covering a period of at least 12 months beginning after the effective date of each registration statement that satisfies the provisions of Section 11(a) of the Securities Act.  For purposes of this subsection (iv), “ Availability Date ” means the 45th day after the end of the fourth fiscal quarter following the quarter that includes the effective date, provided that if such fourth fiscal quarter is the last quarter of the Company’s fiscal year, the Availability Date means the 90th day after the end of such fourth fiscal quarter.

 

4.                                        Notwithstanding Section 8.1 of the Agreement, any amendment, modification or waiver that disproportionately affects the registration rights provided by this Agreement of one or more Investors may be effected only with the written consent of such Investor(s).

 

5.                                        Unless requested in writing by BMS, the Company shall not furnish to BMS any of the information set forth in Section 5 of the Agreement.

 

6.                                        Notice .  Any notice required or permitted by the Agreement shall be given to Transferee at the address listed beside BMS’ signature below.

 

7.                                        All other provisions of the Agreement shall remain unchanged and in full force and effect.

 

8.                                        This Amendment may be executed in two or more counterparts and signatures may be delivered by facsimile, each of which shall be deemed an original and each of which shall be enforceable against the parties actually executing such counterparts, and all of which together shall constitute one instrument.

 

( Signature Pages Follow )

 

3



 

IN WITNESS WHEREOF, this Amendment has been executed as of the date first above written.

 

COMPANY:

BMS:

 

 

 

 

 

 

 

 

SUNESIS PHARMACEUTICALS, INC.

BRISTOL-MYERS SQUIBB COMPANY

 

 

 

 

 

 

 

 

/s/ Daniel N. Swisher, Jr.

 

/s/ Tamar D. Howson

 

Name:

Daniel N. Swisher, Jr.

Name:

Tamar D. Howson

Title:

Chief Executive Officer

Title:

Sr. VP Corporation and Business Development

Address:

341 Oyster Point Blvd.

Address:

345 Park Avenue

 

South San Francisco, CA 94080

 

New York, New York 10154

Fax:

(650) 266-3501

 

 

 

 

SIGNATURE PAGE TO AMENDMENT TO INVESTOR RIGHTS AGREEMENT

 



 

PRIOR INVESTORS:

 

 

Biogen Idec MA, a Massachusetts corporation

 

 

By:

 

 

Name: 

Title:   

 

 

SIGNATURE PAGE TO AMENDMENT TO INVESTOR RIGHTS AGREEMENT

 



 

PRIOR INVESTORS:

 

 

Abingworth Bioventures II SICAV

 

By:

/s/ Genevieve Blaun

 

Name:  Genevieve Blaun

Title:   Liquidator

 

By:

/s/ Gerard Muller

 

Name:  Gerard Muller

Title:  Mandatory

 

 

 

SIGNATURE PAGE TO AMENDMENT TO INVESTOR RIGHTS AGREEMENT

 



 

PRIOR INVESTORS:

 

 

 

 

 

Credit Suisse First Boston Equity Partners, L.P.

 

 

 

By:

/s/ Kenneth J. Lohsen

 

 

Name:  Kenneth J. Lohsen

 

Title:  Attorney-in-fact

 

 

 

 

 

Credit Suisse First Boston Equity Partners

 

(Bermuda), L.P.

 

 

 

By:

/s/ Kenneth J. Lohsen

 

 

Name:  Kenneth J. Lohsen

 

Title:  Attorney-in-fact

 

 

 

 

 

Credit Suisse First Boston U.S. Executive

 

Advisors, L.P.

 

 

 

By:

/s/ Kenneth J. Lohsen

 

 

Name:  Kenneth J. Lohsen

 

Title:  Attorney-in-fact

 

 

 

 

 

Credit Suisse First Boston Finders &

 

Screeners, L.P.

 

 

 

By:

/s/ Kenneth J. Lohsen

 

 

Name:  Kenneth J. Lohsen

 

Title:  Vice President

 

 

 

 

 

EMA Partners Fund 2000, L.P.

 

 

 

By:

/s/ Kenneth J. Lohsen

 

 

Name:  Kenneth J. Lohsen

 

Title:  Vice President

 

 

 

SIGNATURE PAGE TO AMENDMENT TO INVESTOR RIGHTS AGREEMENT

 



 

PRIOR INVESTORS:

 

 

Mayfield Associates Fund III

 

By:

Mayfield VIII Management, L.L.C.,

 

its General Partner

 

By:

/s/ A. Grant Heidrick

 

Name:  A. Grant Heidrick

Title:  Managing Director

 

 

Mayfield IX

 

By:

Mayfield IX Management, L.L.C.,

 

its General Partner

 

By:

/s/ A. Grant Heidrick

 

Name:  A. Grant Heidrick

Title:  Managing Director

 

 

SIGNATURE PAGE TO AMENDMENT TO INVESTOR RIGHTS AGREEMENT

 



 

PRIOR INVESTORS:

 

 

Venrock Associates

 

By:

/s/ Anthony B. Evnin

 

Name: Anthony B. Evnin

Title: General Partner

 

 

Venrock Associates II, L.P.

 

By:

/s/ Anthony B. Evnin

 

Name: Anthony B. Evnin

Title: General Partner

 

 

Venrock Entrepreneurs Fund, L.P.

 

By:

Venrock Management LLC

 

its General Partner

 

By:

/s/ Anthony B. Evnin

 

Name: Anthony B. Evnin

Title: Member

 

 

SIGNATURE PAGE TO AMENDMENT TO INVESTOR RIGHTS AGREEMENT

 



 

PRIOR INVESTORS:

 

 

Warburg, Pincus Equity Partners, L.P.

 

By:

Warburg, Pincus & Co.,

 

its General Partner

 

By:

/s/ Jonathan Leff

 

Name:

Jonathan Leff

Title:

Partner

 

 

Warburg, Pincus Netherlands Equity Partners I, C.V.

 

By:

Warburg, Pincus & Co.,

 

its General Partner

 

By:

/s/ Jonathan Leff

 

Name:

Jonathan Leff

Title:

Partner

 

 

Warburg, Pincus Netherlands Equity Partners II, C.V.

 

By:

Warburg, Pincus & Co.,

 

its General Partner

 

By:

/s/ Jonathan Leff

 

Name:

Jonathan Leff

Title:

Partner

 

 

Warburg, Pincus Netherlands Equity Partners III, C.V.

 

By:

Warburg, Pincus & Co.,

 

its General Partner

 

By:

/s/ Jonathan Leff

 

Name:

Jonathan Leff

Title:

Partner

 

 

SIGNATURE PAGE TO AMENDMENT TO INVESTOR RIGHTS AGREEMENT

 


 



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Exhibit 23.1


Consent of Independent Registered Public Accounting Firm

        We consent to the reference to our firm under the caption "Experts" and to the use of our report dated January 21, 2005, in the Registration Statement (Amendment No. 2 to Form S-1 No. 333-121646) and related Prospectus of Sunesis Pharmaceuticals, Inc. for the registration of its common stock.

/s/   ERNST & YOUNG LLP                               

San Jose, California
April 26, 2005




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Consent of Independent Registered Public Accounting Firm