UNITED STATES
SECURITIES AND EXCHANGE COMMISSION

Washington, D.C. 20549

FORM 10-K

(Mark One)

 

 

x

 

ANNUAL REPORT PURSUANT TO SECTION 13 OR 15(d)

 

 

OF THE SECURITIES EXCHANGE ACT OF 1934

 

For the fiscal year ended: December 31, 2005

or

o

 

TRANSITION REPORT PURSUANT TO SECTION 13 OR 15   (d)

 

 

OF THE SECURITIES EXCHANGE ACT OF 1934

 

For the transition period from                             to                              

Commission file number: 000-50797

MOMENTA PHARMACEUTICALS, INC.

(Exact name of registrant as specified in its charter)

Delaware

 

04-3561634

(State or other jurisdiction of

 

(I.R.S. Employer Identification No.)

incorporation or organization)

 

 

 

675 West Kendall Street, Cambridge, Massachusetts 02142
(Address of principal executive offices) (zip code)

Registrant’s telephone number, including area code:  (617) 491-9700

Securities registered pursuant to Section 12(b) of the Act: None

Securities registered pursuant to Section 12(g) of the Act:

Common Stock, $.0001 par value

(Title of class)

Preferred Stock Purchase Rights, $0.01 par value

Indicate by check mark if registrant is a well-known seasoned issuer, as defined in Rule 405 of the Securities Act.   Yes    o    No    x

Indicate by check mark if the registrant is not required to file reports pursuant to Section 13 or Section 15(d) of the Act.   Yes    o    No    x

Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days.   Yes    x    No    o

Indicate by check mark if disclosure of delinquent filers pursuant to Item 405 of Regulation S-K is not contained herein, and will not be contained, to the best of registrant’s knowledge, in definitive proxy or information statements incorporated by reference in Part III of this Form 10-K or any amendment to this Form 10-K.     o

Indicate by check mark whether the registrant is a large accelerated filer, an accelerated filer, or a non-accelerated filer. See definition of “accelerated filer and large accelerated filer” in Rule 12b-2 of the Exchange Act. (Check one):

Large accelerated filer    o                Accelerated filer    x                Non-accelerated filer    o                

Indicate by check mark whether the registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act. Yes    o    No    x

The aggregate market value of the registrant’s voting shares Common Stock held by non-affiliates of the registrant on June 30, 2005, based on $19.77 per share, the last reported sale price of the shares of Common Stock on the Nasdaq National Market on that date was $164,293,998.

The number of shares outstanding of each of the registrant’s classes of common stock, as of March 1, 2006:

Class

 

 

 

Number of Shares

 

Common Stock, $0.0001 par value

 

[30,500,967]

 

Documents incorporated by reference:

Portions of the information required by Part III of Form 10-K will appear in the registrant’s definitive Proxy Statement on Schedule 14A for the 2006 Annual Meeting of Stockholders and are hereby incorporated by reference into this report.

 




TABLE OF CONTENTS

 

 

 

Page

PART I

 

 

 

 

 

 

Item 1.

 

BUSINESS

 

 

3

 

Item 1A.

 

RISK FACTORS

 

 

24

 

Item 1B .

 

UNRESOLVED STAFF COMMENTS

 

 

45

 

Item 2.

 

PROPERTIES

 

 

45

 

Item 3.

 

LEGAL PROCEEDINGS

 

 

45

 

Item 4.

 

SUBMISSION OF MATTERS TO A VOTE OF SECURITY HOLDERS

 

 

45

 

PART II

 

 

 

 

 

 

Item 5.

 

MARKET FOR THE REGISTRANT’S COMMON EQUITY, RELATED STOCKHOLDER MATTERS AND ISSUER PURCHASES OF EQUITY SECURITIES

 

 

46

 

Item 6.

 

SELECTED FINANCIAL DATA

 

 

46

 

Item 7.

 

MANAGEMENT’S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS

 

 

49

 

Item 7A.

 

QUANTITATIVE AND QUALITATIVE DISCLOSURES ABOUT MARKET RISK

 

 

59

 

Item 8.

 

FINANCIAL STATEMENTS AND SUPPLEMENTARY DATA

 

 

59

 

Item 9.

 

CHANGES IN AND DISAGREEMENTS WITH ACCOUNTANTS ON ACCOUNTING AND FINANCIAL DISCLOSURE

 

 

81

 

Item 9A.

 

CONTROLS AND PROCEDURES

 

 

82

 

Item 9B.

 

OTHER INFORMATION

 

 

85

 

PART III

 

 

 

 

 

 

Item 10.

 

DIRECTORS AND EXECUTIVE OFFICERS OF THE REGISTRANT

 

 

86

 

Item 11.

 

EXECUTIVE COMPENSATION

 

 

86

 

Item 12.

 

SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS AND MANAGEMENT AND RELATED STOCKHOLDER MATTERS

 

 

86

 

Item 13.

 

CERTAIN RELATIONSHIPS AND RELATED TRANSACTIONS

 

 

86

 

Item 14.

 

PRINCIPAL ACCOUNTANT FEES AND SERVICES

 

 

86

 

PART IV

 

 

 

 

 

 

Item 15.

 

EXHIBITS AND FINANCIAL STATEMENT SCHEDULES

 

 

87

 

SIGNATURES

 

 

88

 

EXHIBIT INDEX

 

 

89

 

 

2




PART I

Item 1.                         BUSINESS

GENERAL

Overview

Momenta is a biotechnology company specializing in the sequencing, or detailed structural analysis, and design of complex sugars for the development of improved versions of existing drugs, the development of novel drugs and the discovery of new biological processes. We are also utilizing our analytical capabilities to create technology-enabled generic versions of sugar-based and complex drug products. Through detailed analysis of the molecular structure of complex sugars, we believe our proprietary technology enables us to define the specific sequences contained in complex drugs, including those structures that had previously not been described due to a lack of available technology. In addition, we are able to derive a more complete understanding of the roles that sugars play in cellular function, disease and drug action based on our analytical capabilities. With our capabilities, we have developed a diversified pipeline of near-term product opportunities and novel discovery and development candidates.

We are a Delaware corporation. We were incorporated and began operations in 2001 under the name Mimeon, Inc. and changed our name to Momenta Pharmaceuticals, Inc. in September 2002. Our principal offices are located at 675 West Kendall Street, Cambridge, Massachusetts 02142, and our telephone number is (617) 491-9700.

In this Annual Report on Form 10-K, the terms “Momenta,” “we,” “us” and “our” refer to Momenta Pharmaceuticals, Inc. and its subsidiaries.

We are subject to the informational requirements of the Securities Exchange Act of 1934, as amended, or the Exchange Act, and, accordingly, file reports, proxy statements and other information with the Securities and Exchange Commission. Such reports, proxy statements and other information can be read and copied at the public reference facilities maintained by the Securities and Exchange Commission at the Public Reference Room, 100 F Street, N.E., Room 1580, Washington, D.C. 20549. Information regarding the operation of the Public Reference Room may be obtained by calling the Securities and Exchange Commission at 1-800-SEC-0330. The Securities and Exchange Commission maintains a web site (http://www.sec.gov) that contains material regarding issuers that file electronically with the Securities and Exchange Commission.

Our Internet address is www.momentapharma.com. We are not including the information contained on our web site as a part of, or incorporating it by reference into, this Annual Report on Form 10-K. We make available free of charge on our website our Annual Reports on Form 10-K, Quarterly Reports on Form 10-Q, Current Reports on Form 8-K and amendments to those reports filed or furnished pursuant to Section 13(a) or 15(d) of the Exchange Act, as soon as reasonably practicable after we electronically file such material with, or furnish it to, the Securities and Exchange Commission.

Our logo, trademarks, and service marks are the property of Momenta. Other trademarks or service marks appearing in this Annual Report on Form 10-K are the property of their respective holders.

Background on Sugars and Other Complex Mixtures

The development of techniques to sequence DNA and proteins created the foundation of the biotechnology industry and enabled the first biotechnology companies to develop breakthrough products. Scientific studies have demonstrated that sugars, like DNA and proteins, play fundamental roles in the regulation of biological activity, processes and pathways and, consequently, in the cause and treatment of many diseases. The manner in which a cell produces sugars is critical for normal cell function and communication. For example, malfunctions in complex sugar production and the resulting abnormalities in

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sugar structures have been shown to play fundamental roles in numerous major diseases, such as cancer, cardiovascular disease, Alzheimer’s disease, inflammatory disease and viral infection.

Due to the structural complexity of sugars and the lack of sophisticated analytical tools and methods to analyze them, sugars have not been well defined nor have their molecular structures been determined. Complex sugars are composed of individual monosaccharides, or sugar building blocks, that are difficult to differentiate. Each sugar building block may differ only slightly from the next. These monosaccharides link together to form polysaccharide chains that exist in linear or branched forms. Further, complex polysaccharides often exist as mixtures in which individual sugar chains are similar, but distinct, from other sugar chains in the mixture. Without being able to identify specific chemical structures, it has been difficult to monitor how sugars behave when they are contained in drugs or in the human body. In addition, we believe it has not been possible to thoroughly characterize, or sequence, complex drugs containing sugars. As a consequence, the development of drugs containing sugars to date has been through more of a “trial-and-error” approach. We believe greater understanding of the composition and functions of complex sugar structures, as well as their roles in critical biological processes and pathways will provide significant commercial opportunities for drug development.

Challenges Associated with Analyzing Sugars

Unlike the significant progress that has been made in the analysis of DNA and proteins, widespread analysis and application of complex sugars to drug development has been inhibited by a number of technical challenges. Complex sugars have far greater structural complexity than DNA and proteins, making their analysis much more difficult. For example, sugars have a larger number of potential building blocks than DNA or proteins, dramatically increasing the complexity of, and possible solutions for, a polysaccharide sequence. Additionally, unlike DNA and proteins, complex sugars cannot be isolated and studied in large quantities for analysis. Most complex sugars exist in small quantities as heterogeneous mixtures. Current technologies are unable to accommodate the small quantities of materials present in biological samples or adequately differentiate and quantify distinct polysaccharides or individual sugar building blocks.

Momenta’s Technology Solution

We have developed an integrated analytical solution that we believe addresses the challenges of creating drugs based on complex sugars. Our technology enables rapid, precise and thorough sequencing of complex sugars. Using a comprehensive library of proprietary enzymes or reagents, we break down complex sugar chains, including those contained in complex mixtures, into measurable units. By applying these enzymes and reagents to complex sugar sequences or mixtures, we gain specific knowledge about the basic sugar building blocks, which make up longer sugar chains, as well as the sequence order of the sugar building blocks. We then apply proprietary improvements to established analytical techniques such as Matrix Assisted Laser Desorption Ionization-Mass Spectrometry, or MALDI-MS, nuclear magnetic resonance, or NMR, and capillary electrophoresis, or CE, in order to analyze and gather information regarding the components, structure and arrangement of the building blocks in the sugar chains. The third component of our technology is the application of proprietary mathematical methods that integrate the disparate information obtained from various analytical techniques to arrive at a specific, numerically-derived solution describing the complete structure of a specific sugar sequence. We are also applying our analytical techniques and methodologies to the characterization of other complex mixtures that do not contain sugars. These complex mixtures share some of the same technical challenges as complex sugar-based mixtures, including the historic inability to measure or quantify the specific units contained in the mixture.

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Momenta Products and Programs

Our products and programs are based on the application of our analytical technology to the characterization of existing complex drugs, the engineering of improvements to existing complex drugs, and the study of the natural biological activity of complex sugars. Our pipeline products include technology-enabled generic versions of complex drugs, rationally engineered improved complex drugs and drug candidates which we have developed based on our understanding of the biological activity of complex sugars. Our product development goals in these areas are summarized below:

Develop technology-enabled generic versions of complex drugs through characterization

Many currently marketed complex drugs, particularly those containing sugars, have not been fully characterized due to a lack of available technology. These drugs include heparins, therapeutic proteins, antibodies, vaccines and antibiotics, among others. Our technology has the potential to determine the precise chemical composition of existing complex drugs, including those structures that had not previously been described. To date, the inability to analyze the components found in complex drugs has made it difficult to obtain approval of generic versions of such drugs. We believe that the data obtained from our analytical approach can be applied to develop technology-enabled generic versions of these drugs. Our most advanced product candidate, M-Enoxaparin is designed to be a technology-enabled generic version of Lovenox ®  (enoxaparin sodium injection), a low molecular weight heparin, or LMWH, used to prevent and treat deep vein thrombosis, or DVT, and treat acute coronary syndrome, or ACS.

Improve complex drugs based on insights into structure-activity relationships

We are creating improved versions of existing drugs by rationally engineering complex sugar structures contained in these drugs to improve their properties and address unmet medical needs. We use our characterization technology to characterize the chemical structures that make up currently marketed drugs and relate these structures to specific biological activity. We then use our understanding of structure-activity relationship analysis, or SARs, to engineer modifications to the sugar structures to favorably influence the clinical properties of the drugs. For example, our development candidate, M118, is a LMWH that has been engineered to possess an improved therapeutic profile, compared with other currently marketed products, to treat patients diagnosed with ACS. Additionally, our drug delivery program utilizes sugars’ natural role in storage and transport to efficiently transport existing therapeutic proteins, as well as other large molecules, across mucosal membranes, such as those in the lungs.

Develop novel candidates based on understandings of the natural biological activity of complex sugars

We are also combining our technology and ability to perform SAR analysis with our understanding of biology and disease in order to develop novel therapeutics. Our goal is to discover and develop new classes of therapeutics based on insights into sugars’ functions in biological processes. For example, our oncology program has shown through in vitro and in vivo research that sugars have significant roles in and influence over the disease pathways of cancer.

Development Programs:

M-Enoxaparin

Our most advanced product candidate, M-Enoxaparin, is designed to be a generic version of Lovenox. Lovenox is a widely-prescribed LMWH used for the prevention and treatment of DVT and treatment of ACS. Lovenox is distributed worldwide by Sanofi-Aventis and is also known outside the United States as Clexane ®  and Klexane ®  Sanofi-Aventis reported worldwide net sales of Lovenox of approximately $2.7 billion in 2005, with approximately $1.6 billion coming from the United States market. Analysts

5




project that Lovenox will remain a leading LMWH product, with estimated annual sales approaching $3.5 billion by 2008.

We have formed a collaboration with Sandoz to jointly develop, manufacture and commercialize M-Enoxaparin. Under our collaboration agreement, Sandoz is responsible for funding substantially all of the M-Enoxaparin development, regulatory, legal and commercialization costs. The total cost of development and commercialization and the timing of bringing M-Enoxaparin to market is subject to uncertainties relating to the development, regulatory approval and legal processes. In accordance with our collaboration agreement with Sandoz, an ANDA was submitted to the FDA for M-Enoxaparin on August 29, 2005, seeking approval to market M-Enoxaparin in the United States.

We anticipate that the FDA’s review of the M-Enoxaparin ANDA will require, among other things, a review of our technology and characterization methodology, as well as our manufacturing data. In parallel, Momenta, in collaboration with Sandoz is focused on activities related to supporting the FDA’s review of the ANDA and preparing for the commercialization of M-Enoxaparin, if and when, approved, including advancing manufacturing, supply chain, and sales and marketing objectives.

Lovenox composition

Lovenox is a heterogeneous mixture of complex sugar chains that, in our view, prior to the application of our technology, had not been adequately analyzed. It is composed of a mixture of sugar chains that vary with respect to length and sequence, resulting in a diversity of chemical structures in the mixture. The current description of Lovenox includes molecular weight distribution and in vitro measurements of Lovenox’s ability to inhibit blood clotting factors Xa and IIa, or its anti-Xa and anti-IIa activity. Molecular weight distribution provides a rough measure of the range of chain lengths but provides no information about detailed sequences or chemical structures contained in Lovenox. The in vitro measures of anti-Xa and anti-IIa activity describe certain aspects of anticoagulation but only partially define the biological and clinical activity of Lovenox. According to Sanofi-Aventis, only 15% to 25% of the chains in LMWHs contain sequences that bind to the factor that is responsible for anti-Xa and anti-IIa activity.

The need for detailed analysis of enoxaparin

According to FDA regulations, a generic drug must have, among other requirements, the same active ingredients as the innovator or the “reference listed drug product” upon which the generic application is based. The FDA’s definition of an active ingredient is, “any component that is intended to furnish pharmacological activity or other direct effect in the diagnosis, cure, mitigation, treatment, or prevention of disease, or to affect the structure or any function of the body of man or other animals.”

Sanofi-Aventis, in a Citizen Petition filed with the FDA in February 2003, requested, among other things, that the FDA refrain from approving any ANDA for a generic version of Lovenox until such time as Lovenox has been fully characterized. Sanofi-Aventis has reiterated this request and provided additional commentary and supporting data directed at the need for full characterization of Lovenox in subsequent Citizen Petition supplements. Our ability to sequence and analyze complex mixtures of sugars has allowed us to analyze Lovenox and develop a process that we believe can be used to make a generic version of Lovenox that will meet the FDA requirements for ANDA approval. We believe it will be difficult for others to perform similar analyses.

Under FDA guidelines, generic drugs are considered pharmaceutically equivalent to their branded counterparts if, among other things, they contain the same active ingredient(s), dosage form, route of administration and are identical in strength or concentration. To be therapeutically equivalent, a generic product must first be pharmaceutically equivalent and also be expected to have the same clinical effect and safety profile, thus making it typically interchangeable with the branded product; interchangeable products are denoted by an “A” rating by the FDA. Products with “A” ratings are generally substituted for the

6




innovator drug by both in-hospital and retail pharmacies and many health insurance plans require automatic substitution of “A” rated generic versions when they are available, although physicians may still prescribe the branded drug for individual patients.

U.S. Legal Matters

Currently Sanofi-Aventis has two listed patents for Lovenox in the Orange Book, the FDA’s listing of approved drug products. These patents are U.S. Patent No. 5,389,618 or the ’618 Patent, and its counterpart, Reissue Patent No. 38,743, or the Reissue Patent. On June 14, 2005, the reissue patent issued and the original ’618 patent was surrendered by operation of law. That is, according to Aventis, by operation of law, the ’618 patent ceases to exist and has been replaced by the Reissue Patent. Aventis has reported that the claims of the ’618 patent are identical to the corresponding claims of the Reissue Patent. According to the Orange Book, the Reissue Patent expires February 14, 2012.

In June 2003, prior to issuance of the Reissue Patent, Sanofi-Aventis announced that it received individual notices from Amphastar Pharmaceuticals, Inc., or Amphastar, and Teva Pharmaceuticals USA, Inc., or Teva, indicating that each had submitted to the FDA its own ANDA for enoxaparin. According to Sanofi-Aventis, each ANDA included a paragraph IV certification, or a patent certification stating that the ’618 patent was either not infringed, or was unenforceable or invalid. Amphastar and Teva submitted these patent certifications because they were seeking from the FDA authorization to manufacture and market a generic version of Lovenox in the United States prior to the expiration of the ’618 patent. Submitting such certifications allowed Sanofi-Aventis to sue Amphastar and Teva for patent infringement of the ’618 patent in August 2003, even though Amphastar and Teva have neither obtained approval for nor marketed their generic versions of Lovenox in the United States. In response to Sanofi-Aventis’s lawsuit, Amphastar and Teva have asserted non-infringement, invalidity and/or unenforceability of the ’618 patent. They have also sought related declaratory judgment relief against Sanofi-Aventis. These lawsuits were consolidated and brought before the U.S. District Court for the Central District of California, or District Court.

On June 15, 2005, the District Court granted summary judgment to Amphastar finding that Sanofi-Aventis’ U.S. Patent No. 5,389,618 is unenforceable due to Sanofi-Aventis’ inequitable conduct before the United States Patent and Trademark Office, or USPTO. Amphastar had also filed two additional motions for summary judgment, requesting that the District Court rule that the claims of the ’618 patent are invalid. These include: (i) motion for summary judgment based on indefiniteness; and (ii) motion for summary judgment based on invalidity in view of the prior art. Sanofi-Aventis has opposed Amphastar’s motions. By reason of having granted Amphastar’s motion for Summary Judgment based on inequitable conduct, the District Court denied as moot Amphastar’s remaining motions for summary judgment, described above.

Based on its June 15 th  decision, on July 25, 2005 the District Court entered final judgment on Amphastar’s and Teva’s claims that the ’618 Patent and the Reissue Patent are unenforceable on the grounds of inequitable conduct.

During June 2005, Amphastar and Teva each amended their own ANDA to include a second paragraph IV certification stating that the Reissue Patent was either not infringed, unenforceable or invalid. Amphastar and Teva submitted the patent certifications because they were seeking from the FDA authorization to manufacture and market a generic version of Lovenox in the United States prior to the expiration of the Reissue Patent. Submitting such certifications allowed Sanofi-Aventis to sue Amphastar and Teva for patent infringement of the Reissue Patent in July 2005, even though Amphastar and Teva have neither obtained approval for nor marketed their generic versions of Lovenox in the United States.

In September 2005, Sanofi-Aventis filed an appeal of the District Court’s decision and final judgment of unenforceability based on inequitable conduct to the U.S. Court of Appeals for the Federal Circuit, or Court of Appeals. Oral argument was held on January 13, 2006. However, the Court of Appeals has not yet

7




issued its decision. Intellectual property litigation involves many uncertainties, and there is no assurance that the Court of Appeals will affirm the District Court’s decision that the Reissue Patent is unenforceable due to inequitable conduct.

If the Court of Appeals does not affirm the District Court’s finding of inequitable conduct in connection with the ’618 Patent and instead remands the District Court’s decision, we may experience delays in the commercialization of M-Enoxaparin. Further, if the matter is remanded, and if a paragraph IV certification against the ’618 Patent and Reissue Patent has been or will be filed with the ANDA for M-Enoxaparin, we expect Sanofi-Aventis to bring suit for patent infringement of the Reissue Patent against us. If Sanofi-Aventis asserts the Reissue Patent or any other patent against us, with certain exceptions, Sandoz will indemnify us for any losses we incur or must pay to a third party which result from patent infringement litigation by Sanofi-Aventis, and certain other claims, in each case which relate to the development and commercialization of our generic version of Lovenox. Sandoz may offset certain of these costs against the profit-sharing amounts, the royalties and the milestone payments they may be required to make to us.

Neither Teva nor Amphastar are currently marketing a generic version of enoxaparin in the United States, nor can they market such product in the United States prior to expiration of the Reissue Patent unless the court concludes that the patent is invalid, unenforceable or not infringed, and the FDA approves Amphastar’s or Teva’s respective ANDA filings.

M118

M118 is a LMWH that we rationally designed to provide improved clinical properties to treat patients with ACS.  Currently marketed LMWHs primarily inhibit a single factor that contributes to clot formation, whereas M118 is a potent inhibitor of multiple factors in the blood that lead to clot formation. The ability to inhibit these factors is critical in ACS patients who have an existing clot in a coronary artery because of the need to prevent not only formation of new clots, but also the extension of existing clots and further blockage of the artery. Heparins, including unfractionated heparin, or UFH, and LMWHs, are routinely used as baseline therapy in ACS, and if required, in subsequent invasive procedures such as angioplasty.  UFH is also used in conjunction with coronary artery bypass surgery, or CABG. The selection of a particular heparin is dictated by the drug’s efficacy, predictability, safety and the ability to monitor the level of and reverse anticoagulation. Due to M118’s distinct biological activities and its flexibility to be used in a broad range of clinical settings, we believe M118 could become the baseline heparin of choice to treat patients diagnosed with ACS, including those patients who subsequently require angioplasty or CABG.

Market overview

ACS includes several diseases ranging from unstable angina, which is characterized by chest pain at rest, to acute myocardial infarction, or heart attack, which is caused by a complete blockage of a coronary artery. While some patients are initially medically managed with anti-clotting agents such as UFH or LMWH, an increasing proportion of ACS patients are proceeding to early intervention such as angioplasty or CABG. Both angioplasty and CABG require anticoagulant therapy to prevent clot formation during the procedure. UFH is currently the foundation anti-clotting agent used in both angioplasty and CABG. No LMWHs are currently approved for use in either angioplasty or CABG. M118 is designed to be a LMWH that could be used in multiple settings, including initial medical management, angioplasty or CABG.

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M118 development strategy

To design M118, we utilized our proprietary analytical methods and enzymes, together with our ability to sequence the complex sugar chains within UFH starting material, to identify the activity of various sugar sequences. We then tailored the design of M118 to develop a drug candidate with specific attributes to address the unmet medical needs of anticoagulation therapy in ACS, including, among others, reversibility and the ability to be monitored. Our preclinical animal studies have demonstrated potential benefits of M118 over UFH and other LMWHs. These potential benefits include:

·        Increased efficacy.    In direct comparison with UFH and other LMWHs, M118 more effectively prevented clotting of injured arteries in a rat thrombosis model. We have demonstrated through in vivo and in vitro experiments that M118 acts at multiple points in the coagulation cascade by inhibiting factor Xa and factor IIa and through the release of tissue factor pathway inhibitor.

·        Reversibility.    We have demonstrated in animals that the anti-clotting effects of M118 are fully reversible by administering protamine sulfate, the standard drug used to reverse anticoagulant activity. LMWHs are not fully reversible with protamine.

·        Ability to monitor.    Due to the presence of certain saccharide sequences in M118, the anti-clotting activity of M118 can be monitored by standard laboratory tests that detect the presence of factor IIa, or thrombin. Currently, LMWHs cannot be monitored efficiently with routine laboratory tests.

·        Diminished adverse reaction risk.    M118 has been engineered to reduce certain sugar sequences contained within UFH and other LMWHs that may provoke a potentially life-threatening reaction known as heparin-induced thrombocytopenia, or HIT.

In November 2004, we initiated efforts to develop a more efficient and reproducible manufacturing process for M118. Those efforts resulted in a new process with greater yield and reproducibility at reduced cost, as compared to the prior manufacturing process. In September 2005, we initiated Good Laboratory Practices, or GLP, toxicology and pharmacology studies for M118 intended to support our IND. We expect that additional expenditures will be required to complete preclinical testing. If such preclinical testing is successful, we intend to file an IND in mid-2006 and begin Phase I clinical trials shortly thereafter, if the IND goes into effect. Because M118 is in preclinical development, we are not currently able to estimate the cost to complete the research and development phase nor are we able to estimate the timing of commercialization of M118.

Other Complex Mixture Drugs

We are exploring the application of our technology to the analysis of other complex mixture drugs beyond heparins. Certain drug products exist as complex mixtures. In addition to heparins, complex mixtures include synthetic, semi-synthetic and naturally derived products and are composed of molecules that, due to their diversity, are difficult to fully characterize. Drugs which are complex mixtures can be approved and regulated under either the New Drug Application, or NDA, or Biological Licensing Application, or BLA, regulatory paths at the FDA. Some complex mixture products, such as estrogen products, peptide mixtures, and botanical drug products, have been approved as NDAs. However, many other complex mixture products have been approved as BLAs, including glycoproteins such as erythropoietin, blood clotting factors, and interferon beta. We are seeking to apply our technology to complex mixture products irrespective of the regulatory path under which the product was approved.

For complex mixtures approved as NDAs, we are applying our characterization technology to develop technology-enabled generic products. We have identified a candidate for this strategy and are currently refining the characterization data and process development work. We continue to advance our discussions for this complex mixture product with potential strategic partners.

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For complex mixtures approved as BLAs, such as glycoprotein drugs, we are applying our technology to characterize and better understand these molecules. Many glycoprotein drugs, including protein and antibody products, contain branched sugars that vary from molecule to molecule. These sugars impart specific biological properties to the glycoprotein or antibody drug and can often comprise a significant portion of the mass of a molecule. However, many of these products have not been thoroughly characterized due to lack of available technology. We believe we can apply our technology to the analysis of glycoproteins in several ways:

·        Characterization of protein drugs.    We intend to work with innovator biotechnology companies to help them better understand the sugars contained in their products, which can assist them with manufacturing and quality control activities.

·        Follow-on protein drugs.    We believe recent advances in analytic technology, such as the technology developed by us, will likely play a significant role in facilitating the development of equivalent versions of protein drugs. The market size of protein-based drugs potentially vulnerable to follow-on or generic versions, given projected patent expirations, is estimated to reach approximately $12 billion by 2010. Most of these products are glycosylated, or contain sugars on the exterior of their protein compositions. Presently, there is no regulatory pathway for approving follow-on protein products in the United States. Increased capabilities for analyzing and characterizing products are likely to be critical, however, for meeting standards for approval of follow-on protein drugs. We may, therefore, seek to create technology-enabled follow-on protein products, leveraging strategies similar to those of M-Enoxaparin.

·        Improved protein drugs.    We believe we can assist biotechnology companies in developing improved and next generation versions of protein products by analyzing and modifying specific branched sugar structures. By combining our characterization expertise with our ability to do SAR analysis, we can correlate specific structures with biologic function and engineer improved properties. Sugars on therapeutic proteins affect, among other things, the half-life, the specificity of targeting, as well as the ability of the protein to transmit signals across cells.

M-Dalteparin

M-Dalteparin is targeted to be a technology-enabled generic version of Fragmin ® , a LMWH product. Fragmin is indicated for the prevention of DVT and selected indications in ACS. In September 2005, Eisai Inc., a U.S. pharmaceutical subsidiary of Eisai Co. Ltd., obtained U.S. promotion rights to Fragmin from Pfizer Inc. Fragmin is marketed by Pfizer in Europe and by Kissei Pharmaceutical Co, Ltd. in Japan. Similar to Lovenox, Fragmin is currently described by limited measures such as molecular weight distribution, anti-Xa activity and anti-IIa activity. We believe that additional analysis is necessary to demonstrate that a generic version of Fragmin has the same active ingredients as the branded drug. Through our technology, we believe we have the ability to analyze Fragmin and demonstrate that our generic product has the same active ingredients as Fragmin, thereby enabling the FDA to approve an ANDA for Dalteparin.

In November 2005, we reprioritized the M-Dalteparin program in light of other more commercially attractive opportunities. We have reduced our internal resources for M-Dalteparin while we assess our options to pursue commercialization and partnering of the product. The total cost of development and commercialization and the timing of bringing M-Dalteparin to market are subject to uncertainties relating to the market growth for Fragmin, as well as the development, regulatory and legal approval processes. The Orange Book patent listed for Fragmin expired in January 2005.

Discovery Programs:

We are also applying our analytical capabilities for complex sugars to several discovery programs, including a drug delivery program and an oncology program. Through our drug delivery program, we have

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identified a mechanism by which sugars facilitate the transport of drugs across mucosal membranes, enabling the delivery of larger proteins and leading to higher levels of bioavailability, or levels of drug in the blood. We believe this sugar-mediated transport mechanism can be applied to a variety of marketed drugs and drug candidates. While our current focus is on the pulmonary delivery of therapeutic proteins where achieving adequate bioavailability has been a challenge, the technology has potentially broad application to the delivery of other drugs across other mucosal membranes.

A second discovery program is focused on the role that complex sugars play in biological systems, including regulating the development and progression of disease. Our initial focus is cancer, which is a disease characterized by unregulated cell growth. Sugars play a part in the conversion of normal cells into cancerous cells, the regulation of tumor growth, and tumor invasion and metastasis. We believe that our technology can provide us with a better understanding of the role of sugars in disease, which we hope will enable us to discover novel sugar therapeutics, as well as to discover new disease mechanisms that can be targeted with small molecule or antibody drugs.

Collaboration and Licenses

Sandoz

In November 2003, we entered into a collaboration and license agreement with Sandoz to jointly develop and commercialize injectable enoxaparin and any improved injectable form of enoxaparin for which Lovenox is the reference listed drug and for which an ANDA could be approved by the FDA. Under the terms of this agreement, we and Sandoz agreed to exclusively work with each other to develop and commercialize injectable enoxaparin for any and all medical indications within the United States. In addition, we granted Sandoz an exclusive license, under our intellectual property rights, to develop and commercialize injectable enoxaparin for all medical indications within the United States.

We are in discussions with Sandoz regarding an exclusive license to develop and commercialize injectable enoxaparin outside of the United States. Further, Sandoz may exercise a right of first negotiation to work with us on the research, development, manufacturing or commercialization, inside and/or outside the United States, of a generic version of Fragmin and/or enoxaparin administered by any route of delivery other than injection or certain improved forms of enoxaparin for which approval by the FDA would require the filing of a NDA.

Under this collaboration, Sandoz makes certain payments to us. As mutually agreed, we provide, and Sandoz pays us for full-time equivalent scientific, technical and/or management work. Sandoz is also responsible for funding substantially all of the other ongoing development and commercialization costs and legal expenses incurred with respect to injectable enoxaparin, subject to termination rights upon reaching agreed upon limits. In addition, Sandoz will, in the event there are no third party competitors marketing a Lovenox-Equivalent Product, as defined in the agreement, share profits with us. Alternatively, in certain circumstances, if there are third party competitors marketing a Lovenox-Equivalent Product, Sandoz will pay royalties to us on net sales of injectable enoxaparin. If certain milestones are achieved with respect to injectable enoxaparin under certain circumstances, Sandoz may also make certain milestone payments to us, which would reach $55.0 million if all such milestones are achieved. A portion of the development expenses and certain legal expenses which in the aggregate have exceeded a specified amount will be offset against the profit-sharing amounts, the royalties and the milestone payments. Sandoz may also offset a portion of any product liability costs and certain other expenses arising from patent litigation against the profit-sharing amounts, the royalties and the milestone payments.

The collaboration is governed by a joint steering committee and a joint project team, each consisting of an equal number of Sandoz and Momenta representatives. Most decisions must be made unanimously, with Sandoz collectively having one vote and us having one vote. Sandoz has sole authority to make decisions with respect to any litigation claiming that the manufacture, use or sale of the injectable enoxaparin product infringes any patents listed in the Orange Book for Lovenox. In addition, Sandoz has

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the sole authority to determine whether or not to launch the injectable enoxaparin product prior to receipt of final legal clearance from any such infringement claims, as well as determine the price at which it will sell the injectable enoxaparin product. Sandoz filed the ANDA for M-Enoxaparin in August 2005.

We and Sandoz will indemnify each other for losses resulting from the indemnifying party’s misrepresentation or breach of its obligations under the agreement. We will indemnify Sandoz if we actually misappropriate the know-how or trade secrets of a third party. Sandoz will indemnify us and our collaborators involved in the enoxaparin program for any losses resulting from any litigation by third parties, including Sanofi-Aventis, claiming that the manufacture, use or sale of injectable enoxaparin infringes any patents listed in the Orange Book for Lovenox, any product liability claims with respect to injectable enoxaparin and any other claims relating to the development and commercialization of injectable enoxaparin. To the extent that any losses result from a third-party claim for which we are obligated to indemnify Sandoz, Sandoz will have no obligation to indemnify us. After the expiration or termination of the agreement, these indemnification obligations will continue with respect to claims that arise before or after the termination of the agreement due to activities that occurred before or during the term of the agreement.

Unless terminated earlier, the agreement will expire upon the last sale of injectable enoxaparin by or on behalf of Sandoz in the United States. Either party may terminate the collaboration relationship for material uncured breaches or certain events of bankruptcy or insolvency by the other. Sandoz may also terminate the agreement if the product or the market lacks commercial viability, if new laws or regulations are passed or court decisions rendered that substantially diminish our legal avenues for redress, or, in multiple cases, if certain costs exceed mutually agreed upon limits. If Sandoz terminates the agreement (except due to our uncured breach) or if we terminate the agreement due to an uncured breach by Sandoz, we will be granted an exclusive license under certain intellectual property of Sandoz to develop and commercialize injectable enoxaparin in the United States and our obligation to indemnify Sandoz will survive with respect to claims that arise due to our exclusive development or commercialization of injectable enoxaparin after the term of the agreement. In the event of a termination by Sandoz due to the incurrence of costs beyond the agreed upon limits, we must pay certain royalties to Sandoz on our net sales of injectable enoxaparin. If Sandoz terminates the agreement due to our uncured breach, Sandoz retains the exclusive right to develop and commercialize injectable enoxaparin in the United States. In addition, Sandoz’ profit sharing, royalty and milestone payment obligations survive and Sandoz’ obligation to indemnify us will survive with respect to claims that arise due to Sandoz’ exclusive development or commercialization of injectable enoxaparin after the term of the agreement. In addition, if Sandoz terminates the agreement due to our uncured breach, Sandoz would retain its rights of first negotiation with respect to certain of our other products and its rights of first refusal outside the United States.

Massachusetts Institute of Technology

In December 2001, we entered into a patent license agreement with the Massachusetts Institute of Technology, or M.I.T., pertaining to the characterization and synthesis of sugars for the purpose of researching, developing and commercializing products (other than sequencing machines) and processes under the licensed patents. This agreement was subsequently amended and restated in early November 2002 and further amended in 2003 and 2004. We entered into an additional patent license agreement with M.I.T. in late October 2002 which gave us the right to develop and commercialize sequencing machines. These two agreements grant us various exclusive and nonexclusive worldwide licenses, with the right to grant sublicenses, under certain patents and patent applications relating to (i) methods and technologies for characterizing sugars, (ii) certain heparins, heparinases and other enzymes, and (iii) synthesis methods.

Subject to typical retained rights of M.I.T. and the United States government, we are granted: various exclusive and nonexclusive rights to certain methods and technologies, heparinases and other enzymes for the purpose of characterizing sugars, manufacturing products, and selling or leasing sequencing machines;

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exclusive rights to certain novel heparins and heparinases, including M118, for use as therapeutics; and nonexclusive rights to certain methods and technologies for the synthesis of sugars for use as therapeutics.

We must meet certain diligence requirements in order to maintain our licenses under the two agreements. Under the agreements, we must expend at least $1.0 to $1.2 million per year commencing in 2005 towards the research, development and commercialization of products and processes covered by the agreements. In addition, we are obligated to make first commercial sales and meet certain minimum sales thresholds of products or processes including, under the amended and restated agreement, a first commercial sale of a product or process no later than June 2013 and minimal sales of products thereafter, ranging from $0.5 million to $5.0 million annually. M.I.T. may convert the exclusive licenses granted to us under the amended and restated license agreement to non-exclusive licenses, as its sole remedy, if we fail to meet our diligence obligations. Under the license agreement covering sequencing machines, M.I.T. has the right to treat our failure to fulfill our diligence obligations as a material breach of the license agreement.

In exchange for the licenses granted in the two agreements, we have paid M.I.T. license issue fees and we pay annual license maintenance fees. The Company recorded $82,500, $117,500, and $57,500 as research and development expenses related to M.I.T. license and maintenance fees pursuant to these agreements in the years ended December 31, 2005, 2004 and 2003 respectively. Starting in 2005, we were required to pay annual license maintenance fees pursuant to these agreements ranging, in the aggregate, from $82,500 to $157,500. In addition, during 2001 and 2002, in exchange for the licenses granted under the amended and restated license agreement, M.I.T. was issued 293,136 shares of our common stock valued at $0.3 million and certain employees of M.I.T. who are inventors of the licensed patents and patent applications were issued an aggregate of 81,852 shares of our common stock valued at $0.1 million. We are also required to pay M.I.T. royalties on certain products and services covered by the licenses and sold by us or our affiliates or sublicensees, a percentage of certain other income received by us from corporate partners and sublicensees, and certain patent prosecution and maintenance costs.

We are obligated to indemnify M.I.T. and related parties from losses arising from claims relating to the products, processes or services made, used, sold or performed pursuant to the agreements, unless the losses result from the indemnified parties’ gross negligence or willful misconduct.

Each agreement expires upon the expiration or abandonment of all patents which issue and are licensed to us by M.I.T. under such agreement. The issued patents include 17 United States patents that expire between 2012 and 2023, and 34 foreign patents that expire between 2012 and 2013. We expect that additional patents will issue from filed patent applications. Any such patent will have a term of 20 years from the filing date of the underlying application. M.I.T. may terminate either or both agreements immediately if we cease to carry on our business, if any nonpayment by us is not cured within 60 days of written notice or if we commit a material breach that is not cured within 90 days of written notice. We may terminate either or both agreements for any reason upon six months notice to M.I.T., and, under one agreement, we can separately terminate the license under a certain subset of patent rights upon three months notice.

We have granted Sandoz a sublicense under the amended and restated license agreement to certain of the patents and patent applications licensed to us. If M.I.T. converts our exclusive licenses under this agreement to non-exclusive due to our failure to meet diligence obligations, or if M.I.T. terminates this agreement, M.I.T. will honor the exclusive nature of the sublicense we granted to Sandoz so long as Sandoz continues to fulfill its obligations to us under the collaboration and license agreement we entered into with Sandoz and, if our agreement with M.I.T. is terminated, Sandoz agrees to assume our rights and obligations to M.I.T.

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The Regents of the University of California through the Ernest Orlando Lawrence Berkeley National Laboratory

In November 2002, we entered into an agreement with The Regents of the University of California through the Ernest Orlando Lawrence Berkeley National Laboratory, or Lawrence Berkeley National Lab, under which we exclusively licensed certain patents and patent applications covering the metabolic synthesis of sugars and glycoconjugates. This agreement was subsequently amended in 2004 and 2005. Subject to typical retained rights of Lawrence Berkeley National Lab and the United States government, we were initially granted an exclusive license, with the right to grant sublicenses, for the synthesis, production or modification of sugars and glycoconjugates in or on biological molecules for purposes of researching, developing and commercializing products, services and processes for all human therapeutic applications, excluding the sale of research reagents. During 2005 we elected to retain the license under this broad field. Upon our request, but subject to statutory restrictions or obligations to research sponsors, Lawrence Berkeley National Lab must disclose certain information that is necessary or useful for our use of the licensed patent rights and we have a non-exclusive, royalty-free right to use such information.

Lawrence Berkeley National Lab has an obligation to notify us of certain future inventions that are available for licensing by Lawrence Berkeley National Lab prior to entering into negotiations with others. However, Lawrence Berkeley National Lab is not required to license those inventions to us, or even to negotiate with us.

In connection with this agreement, the Company paid certain license fees and minimum royalties and recorded $130,000, $10,000 and $30,000 as research and development expense in the years ended December 31, 2005, 2004 and 2003 respectively. License fees include $100,000 expensed and paid to Lawrence Berkeley National Lab in 2005 for the election to retain the broader field and $20,000 expensed and paid in 2003. We are also required to pay Lawrence Berkeley National Lab earned royalties on products, services and processes covered by the license and sold by us or our affiliates or sublicensees, a percentage of certain other income received by us from our sublicensees, and patent prosecution and maintenance costs. To the extent that earned royalties in any given year do not meet certain threshold amounts, we are required to make annual minimum royalty payments to Lawrence Berkeley National Lab, ranging from $30,000 to $60,000, in order to maintain the license. The research and development expenses include $30,000, $10,000 and $10,000 in annual minimum royalties that we paid and recorded as expense during the years ended December 31, 2005, 2004 and 2003, respectively.

In order to maintain our license, we must expend at least $1.0 million per year commencing with 2005 towards the research, development and commercialization of products covered by the agreement. If we fail to do so, Lawrence Berkeley National Lab may renegotiate the milestones, terminate the agreement or convert the exclusive license to a non-exclusive license. In order to maintain the broad field, we were required to and did expend an additional amount during 2005 towards the research, development and commercialization of products and processes covered by the license.

We are obligated to indemnify Lawrence Berkeley National Lab, the United States government and related parties from claims arising from our or our sublicensees’ exercise of rights under the agreement, unless the claims result from the indemnified parties’ gross negligence or willful misconduct.

The agreement expires upon the later of the expiration, abandonment or final adjudication of invalidity of the licensed patents. The licensed patents consist of two United States patents that expire in 2017 and one United States patent application. Any patent issuing from such application will have a term of 20 years from the date such application was filed. Our license to use the know-how acquired from Lawrence Berkeley National Lab is paid-up and perpetual following the expiration, but not an earlier termination, of the agreement. Either party may terminate the agreement for the other’s material breach with a 90 day cure period, although Lawrence Berkeley National Lab may terminate if we do not cure payment breaches within 30 days. We may terminate the agreement for any reason upon 180 days notice. Upon termination of the agreement, we are required to assign each sublicense to Lawrence Berkeley

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National Lab and Lawrence Berkeley National Lab is required to assume it unless the sublicensee is then in breach or the sublicense conflicts with Lawrence Berkeley National Lab’s obligations to state or federal governments.

Manufacturing

We do not own facilities for manufacturing any products. Although we intend to rely on contract manufacturers, we have personnel with manufacturing experience to oversee the production of M-Enoxaparin, M118 and future products that we may develop.

We have entered into various agreements with third party contractors for process development, analytical services and manufacturing. In each of our agreements with contractors, we retain ownership of our intellectual property and generally own and/or are assigned ownership of processes, developments, data, results and other intellectual property generated during the course of the performance of each agreement that primarily relate to our products. Where applicable, we are granted non-exclusive licenses to certain contractor intellectual property for purposes of exploiting the products that are the subject of the agreement and in a few instances we grant non-exclusive licenses to the contract manufacturers for use outside of our product area. In each contract, we have the right to terminate for convenience. The agreements also contain typical provisions for both parties to terminate for material breach, bankruptcy and insolvency.

Sales and Marketing

We do not currently have any sales and marketing capabilities. In order to commercialize any products that are approved for commercial sale, we must either develop a sales and marketing infrastructure or collaborate with third parties that have sales and marketing experience. As our development candidates near commercialization, we may build a small, highly-focused, specialty sales and marketing infrastructure. Given that most of our products address patients who are either hospitalized or recently discharged from the hospital, we intend to focus our sales and marketing capabilities in these areas. In addition, we plan to enter into collaborations with established industry participants in key markets outside North America, including the European Union and Asia.

Competition

The development and commercialization of pharmaceutical products is highly competitive. In the event that we were to market and sell M-Enoxaparin, we would face competition from Sanofi-Aventis, the company currently marketing Lovenox, and potentially from other firms if they receive marketing approval for generic versions of Lovenox. Sanofi-Aventis may also choose to market a generic version of Lovenox itself or through an authorized third-party distributor. While there are no generic versions of Lovenox approved by the FDA to date, ANDAs have been submitted to the FDA by Amphastar and Teva, and other ANDAs or other regulatory applications may have been submitted or will be submitted in the future. Any generic enoxaparin application must demonstrate that its product has the same active ingredients as Lovenox, in accordance with the FDA’s requirement for therapeutic equivalence in order to be considered interchangeable with Lovenox. We believe that other firms submitting ANDAs will face difficulty in demonstrating that their products have the same active ingredients as Lovenox.

In addition, other anticoagulants used in the treatment of DVT and ACS will compete with our M-Enoxaparin, M118, and if we elect to pursue it, our M-Dalteparin product. These competitors include:

·        Glaxo-SmithKline’s factor Xa inhibitor, Arixtra ® , which is approved in multiple DVT indications;

·        The Medicines Company’s direct thrombin inhibitor, Angiomax ® , which is approved for use in angioplasty; and

·        Various other LMWH and other UFH products.

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We are aware of other anticoagulant drugs in development, including next-generation LMWHs and several factor Xa inhibitors which are in clinical trials. M118 also faces competition from products other than heparins, such as anti-platelet and direct thrombin inhibitors which may be used in the treatment of ACS.

In the field of complex mixtures, there are several competitors seeking to provide additional characterization or create generic and/or improved versions of marketed complex products. GlycoFi, Inc. and Neose Technologies, Inc. possess selected analytical and engineering capabilities for complex sugars which could be applied to creating generic or improved versions of complex protein-based products containing sugars. Companies such as Barr, Teva, Sandoz, BioGenerix AG, Dragon Pharma, Pliva, Stada, Cangene and GeneMedix also have disclosed intentions to develop and commercialize generic and/or improved versions of marketed protein products in the U.S. or Europe. Most of these companies have experience with manufacturing complex protein products or with commercializing generic products. There has been substantial growth in recent years in the number of generic companies looking to develop generic versions of protein-based products, or biogenerics. Biotechnology and pharmaceutical companies also continue to invest significantly in better understanding their own products or creating improved versions of marketed products.

In the area of non-invasive drug delivery, there are many companies seeking to advance pulmonary delivery for therapeutic proteins. Current companies active in the drug delivery field include Alkermes Inc., Sanofi-Aventis, Eli Lilly and Co., Nektar Therapeutics, Novo Nordisk A/S, Aradigm Corporation, and Pfizer. In addition, there are many major pharmaceutical firms that may pursue non-invasive delivery as line extension strategies for existing products. These companies could become competitors or collaborators for any future inhaled products.

Similarly, our discovery work in oncology faces substantial competition from major pharmaceutical and other biotechnology companies that are actively working on improved and novel therapeutics. Companies competing most directly with our approach of developing sugar-based therapeutics for oncology include GlycoGenesys Inc. and Progen. Pfizer had also conducted investigative clinical trials using Fragmin as a therapeutic drug for cancer; while there are no approved indications, selected trials are ongoing.

The field of glycobiology generally is a growing field with increased competition. However, the capabilities of the field can generally be segmented into those companies using sugars as therapeutics, companies focused on engineering or modifying sugars, including pegylation technologies, and companies focused on analytics. Among those in analytics, we are not aware of others that have similar capabilities for detailed chemical characterization of complex sugars. Procognia Limited’s technology is largely focused on analyzing proteins and their glycosylation. In addition, many major pharmaceutical and biotechnology companies such as Amgen and Biogen Idec Inc. have successfully improved products through sugar modification. Potential competitors with broad glycobiology capabilities include BioTie Therapies Oyj, GLYCO Design Inc., GlycoFi, Inc., Neose Technologies, Inc., and Pro-Pharmaceuticals, Inc. Many of these companies are focused on providing services to pharmaceutical companies rather than focused on drug discovery and product development.

Patents and Proprietary Rights

Our success depends in part on our ability to obtain and maintain proprietary protection for our technology and product candidates, to operate without infringing on the proprietary rights of others and to prevent others from infringing our proprietary rights. Our policy is to seek to protect our proprietary position by, among other methods, filing United States and foreign patent applications related to our proprietary technology and product candidates that are important to the development of our business. We also rely on trade secrets, know-how, continuing technological innovation and in-licensing opportunities to develop and maintain our proprietary position.

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We license or own a total of 17 United States patents and 34 United States patent applications as well as 34 foreign patents and 70 foreign patent applications which are counterparts to certain of the United States patents and patent applications. Our patent portfolio includes claims covering: methods and technologies for characterizing sugars; the use of certain naturally occurring heparinases, heparinase variants and other enzymes which specifically recognize polysaccharides in the characterization of sugars; methods and technologies for chemical and metabolic synthesis of sugars; the composition of matter of certain novel LMWHs, including M118, and heparinase variants; methods to produce and identify sugars associated with glycoproteins; methods to analyze and monitor glycoprotein profiles for purposes associated with the diagnosis, staging, prognosis and monitoring of cancer; and methods for the in vivo non-invasive delivery of sugars.

A significant portion of our patent portfolio covering methods and technologies for characterizing sugars consists of patents and patent applications owned and licensed to us by M.I.T. In addition, a significant portion of the claims in our patent portfolio covering the composition of matter of naturally occurring heparinases, heparinase variants and other enzymes, the use of these heparinases and enzymes in the characterization of sugars, the methods and technologies for chemical synthesis of sugars, and the composition of matter of novel low molecular weight heparins consist of patents and patent applications that are owned and licensed to us by M.I.T. The claims in our patent portfolio covering the methods and technologies for metabolic synthesis of sugars consist of patents and patent applications that are owned and licensed to us by Lawrence Berkeley National Lab.

The patent positions of companies like ours are generally uncertain and involve complex legal and factual questions. Our ability to maintain and solidify our proprietary position for our technology will depend on our success in obtaining effective claims and enforcing those claims once granted. We do not know whether any of our patent applications will result in the issuance of any patents. Moreover, any issued patent does not guarantee us the right to practice the patented technology or commercialize the patented product. Third parties may have blocking patents that could be used to prevent us from commercializing our patented products and practicing our patented technology. Our issued patents and those that may be issued in the future may be challenged, invalidated or circumvented, which could limit our ability to stop competitors from marketing related products or the length of the term of patent protection that we may have for our products. In addition, the rights granted under any issued patents may not provide us with proprietary protection or competitive advantages against competitors with similar technology. Furthermore, our competitors may independently develop similar technologies. For these reasons, we may have competition for both our generic and novel products. Moreover, because of the extensive time required for development, testing and regulatory review of a potential product, it is possible that, before any of our novel heparin or other products can be commercialized, any related patent may expire or remain in force for only a short period following commercialization, thereby reducing any advantage of the patent.

We may rely, in some circumstances, on trade secrets to protect our technology. However, trade secrets are difficult to protect. We seek to protect our technology and product candidates, in part, by confidentiality agreements with our employees, consultants, advisors, contractors and collaborators. These agreements may be breached and we may not have adequate remedies for any breach. In addition, our trade secrets may otherwise become known or be independently discovered by competitors. To the extent that our employees, consultants, advisors, contractors and collaborators use intellectual property owned by others in their work for us, disputes may arise as to the rights in related or resulting know-how and inventions.

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Regulatory and Legal Matters

Government authorities in the United States, at the federal, state and local level, and other countries extensively regulate, among other things, the research, development, testing, manufacture, labeling, promotion, advertising, distribution, marketing and export and import of products such as those we are developing.

United States Government Regulation

In the United States, the information that must be submitted to the FDA in order to obtain approval to market a new drug varies depending on whether the drug is a new product whose safety and effectiveness has not previously been demonstrated in humans, or a drug whose active ingredient(s) and certain other properties are the same as those of a previously approved drug. Drugs follow either the NDA or BLA routes, and a drug that claims to be the same as an already approved NDA drug may be able to follow the ANDA route. Drugs approved as BLAs including glycoproteins, are typically classified as biologics, as they are produced from living systems. Medical devices are approved or cleared for marketing through either the premarket approval application process, or PMA process, or the premarket notification process, or 510(k) clearance process. Drugs or biologics that are combined with medical devices may be regulated as combination products through one or more of the FDA’s regulatory pathways.

NDA and BLA Approval Processes

In the United States, the FDA regulates drugs and biologics under the Federal Food, Drug, and Cosmetic Act, and, in the case of biologics, also under the Public Health Service Act, and implementing regulations. The steps required before a drug or biologic may be marketed in the United States include:

·        completion of preclinical laboratory tests, animal studies and formulation studies under the FDA’s current good laboratory practices;

·        submission to the FDA of an IND for human clinical testing, which must become effective before human clinical trials may begin and must include independent Institutional Review Board, or IRB, approval at each clinical site before the trial is initiated;

·        performance of adequate and well-controlled clinical trials to establish the safety and efficacy of the product for each indication;

·        submission to the FDA of an NDA or BLA;

·        satisfactory completion of an FDA Advisory Committee review, if applicable;

·        satisfactory completion of an FDA inspection of the manufacturing facility or facilities at which the product is produced to assess compliance with current Good Manufacturing Practices, or cGMPs, to assure that the facilities, methods and controls are adequate to preserve the drug’s identity, strength, quality and purity or to meet standards designed to ensure the biologic’s continued safety, purity and potency; and

·        FDA review and approval of the NDA or BLA.

Preclinical tests include laboratory evaluations of product chemistry, toxicity, and formulation, as well as animal studies. An IND sponsor must submit the results of the preclinical tests, together with manufacturing information and analytical data, to the FDA as part of the IND. An IND will automatically become effective 30 days after receipt by the FDA, unless before that time, the FDA raises concerns or questions about issues such as the conduct of the trials as outlined in the IND. In that case, the IND sponsor and the FDA must resolve any outstanding FDA concerns or questions before clinical trials can proceed. Submission of an IND may not result in the FDA allowing clinical trials to commence.

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Clinical trials involve the administration of the investigational product to human subjects under specific protocols and the supervision of qualified investigators. Each clinical protocol must be submitted to the FDA as part of the IND, and an IRB at each site where the study is conducted must also approve the study.

Clinical trials typically are conducted in three sequential phases, but the phases may overlap or be combined. Phase I trials usually involve the initial introduction of the investigational drug into humans to evaluate the product’s safety, dosage tolerance and pharmacodynamics and, if possible, to gain an early indication of its effectiveness.

Phase II trials usually involve controlled trials in a limited patient population to evaluate dosage tolerance and appropriate dosage, identify possible adverse effects and safety risks and evaluate the preliminary efficacy of the drug for specific indications.

Phase III trials usually further evaluate clinical efficacy and test further for safety in an expanded patient population. Phase I, Phase II and Phase III testing may not be completed successfully within any specified period, if at all. Furthermore, the FDA or we may suspend or terminate clinical trials at any time on various grounds, including a finding that the subjects or patients are being exposed to an unacceptable health risk.

Assuming successful completion of the required clinical testing, the results of the preclinical studies and of the clinical studies, together with other detailed information, including information on the chemistry, manufacture and control criteria of the product, are submitted to the FDA in the form of an NDA or BLA requesting approval to market the product for one or more indications. The FDA reviews an NDA to determine, among other things, whether a product is safe and effective for its intended use and whether its manufacturing is cGMP-compliant to assure and preserve the product’s identity, strength, quality and purity. The FDA reviews a BLA to determine, among other things, whether the product is safe, pure and potent and the facility in which it is manufactured, processed, packed or held meets standards designed to assure the product’s continued safety, purity and potency. The FDA may refuse to accept and review insufficiently complete applications.

Before approving an NDA or BLA, the FDA will inspect the facility or the facilities at which the product is manufactured. If the FDA determines the application, manufacturing process or manufacturing facilities are not acceptable, it will outline the deficiencies in the submission and often will request additional testing or information. Notwithstanding the submission of any requested additional information, the FDA ultimately may decide that the application does not satisfy the regulatory criteria for approval.

The testing and approval process requires substantial time, effort and financial resources, and each may take several years to complete. The FDA may not grant approval on a timely basis, or at all. We may encounter difficulties or unanticipated costs in our efforts to secure necessary governmental approvals, which could delay or preclude us from marketing our products. The FDA may limit the indications for use or place other conditions on any approvals that could restrict the commercial application of the products. After approval, some types of changes to the approved product, such as adding new indications, manufacturing changes and additional labeling claims, are subject to further FDA review and approval.

ANDA Process

FDA approval is required before a generic equivalent of an existing brand name drug can be marketed. Such approval for products is typically obtained by submitting an ANDA to the FDA and demonstrating therapeutic equivalence. However, it is within the FDA’s regulatory discretion to determine the kind and amount of evidence required to approve a product for marketing. Although the FDA has accepted ANDAs for generic versions of Lovenox for review, the FDA could determine that therapeutic equivalence cannot be shown for M-Enoxaparin and require an NDA for approval. An ANDA may be

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submitted for a drug on the basis that it is the same as a previously approved branded drug, also known as a listed drug. Specifically, the generic drug that is the subject of the ANDA must have the same active ingredient(s), route of administration, dosage form, and strength, as well as the same labeling, with certain exceptions, and the labeling must prescribe the same conditions of use as the listed drug. If the generic drug product has a different route of administration, dosage form, or strength, the FDA must grant a suitability petition approving the differences(s) from the listed drug before the ANDA may be filed. The ANDA must also contain data and information demonstrating that the generic drug is bioequivalent to the listed drug, or if the application is submitted pursuant to an approved suitability petition, information to show that the active ingredients in the generic drug are the same pharmacological or therapeutic class as those of the listed drug and that the generic drug can be expected to have the same therapeutic effect as the listed drug when administered to patients for a proposed condition of use.

Generic drug applications are termed “abbreviated” because they are not required to duplicate the clinical (human) testing or, generally, preclinical testing necessary to establish the underlying safety and effectiveness of the branded product. However, the FDA may refuse to approve an ANDA if there is insufficient information to show that the active ingredients are the same and to demonstrate that any impurities or differences in active ingredients do not affect the safety or efficacy of the generic product. In addition, like NDAs, an ANDA will not be approved unless the product is manufactured in cGMP-compliant facilities to assure and preserve the drug’s identity, strength, quality and purity. As is the case for NDAs and BLAs, the FDA may refuse to accept and review insufficiently complete ANDAs.

In an ANDA submission, determination of the “sameness” of the active ingredients to those in the reference listed drug is based on the demonstration of the chemical equivalence of the components of the generic version to those of the branded product. While the standard for demonstrating chemical equivalence is relatively straightforward for small molecule drugs, it is inherently more difficult to define active ingredients for complex drugs. Under the NDA pathway, these types of drugs include such products as heparins, vaccines and antibiotics, among others. Due to the limited number of ANDA submissions for complex generics, the FDA has not reached a final position for demonstrating chemical equivalence for many of these products specifically, nor provided broad guidance for achieving “sameness” for complex drugs in general. In many cases, the criteria the FDA may apply are still evolving. Additionally, there is currently no abbreviated approval mechanism for protein-based products, which are generally approved under the BLA pathway. To our knowledge to date, the FDA has not provided official guidance on the legal and scientific aspects of follow-on protein regulation and Congressional action will likely be necessary to establish the regulatory pathway.

To demonstrate bioequivalence, ANDAs generally must also contain in vivo bioavailability data for the generic and branded drugs. “Bioavailability” indicates the rate and extent of absorption and levels of concentration of a drug product in the bloodstream needed to produce a therapeutic effect. “Bioequivalence” compares the bioavailability of one drug product with another, and when established, indicates that the rate of absorption and levels of concentration of a generic drug in the body are the same as the previously approved branded drug. The studies required to demonstrate in vivo bioequivalence are generally very small, quick to complete, and involve few patients. Under current regulations the FDA may waive requirements for in vivo bioequivalence data, for certain drug products where bioequivalence is self evident such as injectable solutions which have been shown to contain the same active and inactive ingredients as the reference listed drug. The FDA, however, has discretion to require applicants to demonstrate bioequivalence for their generic products  For example, bioequivalence data was required for the M-Enoxaparin ANDA submission.

Generic drug products that are found to be therapeutically equivalent by the FDA receive an “A” rating in FDA’s Orange Book, which lists all approved drug products and therapeutic equivalence evaluations. Products that are therapeutically equivalent can be expected in the FDA’s judgment to have equivalent clinical effect and no difference in their potential for adverse effects when used under the

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conditions of their labeling. Products with “A” ratings are generally substitutable for the innovator drug by both in-hospital and retail pharmacies. Many health insurance plans require automatic substitution for “A” rated generic versions of products when they are available, although physicians may still prescribe the branded drug for individual patients.

The timing of final FDA approval of a generic drug for commercial distribution depends on a variety of factors, including whether the applicant challenges any listed patents for the drug and/or its use and whether the manufacturer of the branded product is entitled to one or more statutory exclusivity periods, during which the FDA is prohibited from approving generic products. In addition, submission of an ANDA for a drug that was a new molecular entity when approved will be blocked for five years after the pioneer’s approval, or for four years after approval if the application includes a paragraph IV certification of non-infringement or invalidity against a patent applicable to the branded drug. This does not apply to M-Enoxaparin and M-Dalteparin but may apply to future generic products that we pursue. In certain circumstances, a regulatory exclusivity period can extend beyond the life of a patent, and thus block ANDAs from being approved on or after the patent expiration date. For example, the FDA may now extend the exclusivity of a product by six months past the date of patent expiry if the manufacturer undertakes studies on the effect of their product in children, a so-called pediatric extension.

Combination Product Regulation

Products that are a combination of more than one jurisdictional product type, for example, drug/medical device combinations that are integrated as a whole or combined by co-packaging or co-labeling, may require more than one product approval, and/or the premarket review and postmarket regulation of more than one center at the FDA, possibly resulting in an uncertain approval path. Development and commercialization of our pulmonary formulations could in some instances require modification of the design or labeling of a legally available medical device, in which case the FDA may regulate the drug and delivery device as a combination product and/or require approval or clearance for the modified device. In addition, to the extent the delivery device is owned by a separate company, that company’s cooperation would be required to obtain the necessary changes to the delivery device and any additional clearances or approvals. If no appropriate delivery device is available, we might have to develop and obtain clearance or approval of the delivery device itself. While such a delivery device could be approved as part of an NDA approval, it could also be subject to the medical device premarket submission process, or could be subject to both.

Approval or Clearance of Medical Devices

Medical devices, such as those that might be required as part of our pulmonary delivery technology, may be evaluated either through the premarket approval, or PMA process, or the 510(k) clearance process, depending on the classification of the device. Gathering clinical evidence for devices is subject to FDA’s good clinical practice regulations, including requirements for IRB approval and informed consent. Significant risk devices require an approved investigational device exemption application before studies may begin. PMA approval typically requires, among other things, the submission of valid scientific evidence in the form of preclinical and clinical data, and a pre-approval inspection to determine if the manufacturing facility complies with cGMP practices under the quality system regulation that governs the design and all elements of the manufacture of devices. For clearance, a 510(k) must demonstrate substantial equivalence, i.e., must show that the device is as safe and effective as an already legally marketed device, also known as a predicate device. The evaluation of the newer device must not raise different questions of safety and effectiveness than that of the predicate device. 510(k)s normally do not, but sometimes do require clinical data for clearance.

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Post-Approval Requirements

After regulatory approval of a product is obtained, we are required to comply with a number of post-approval requirements. For example, as a condition of approval of an NDA or BLA, PMA or cleared 510(k) the FDA may require post-marketing testing and surveillance to monitor the product’s safety or efficacy.

In addition, holders of an approved NDA, BLA, PMA or ANDA or cleared 510(k) are required to report certain adverse reactions and production problems to the FDA, to provide updated safety and efficacy information and to comply with requirements concerning advertising and promotional labeling for their products. Also, quality control and manufacturing procedures must continue to conform to cGMP after approval. The FDA periodically inspects manufacturing facilities to assess compliance with cGMP, which imposes certain procedural, substantive and recordkeeping requirements. Accordingly, manufacturers must continue to expend time, money and effort in the area of production and quality control to maintain compliance with cGMP and other aspects of regulatory compliance. We use, and will continue to use in at least the near term, third-party manufacturers to produce our products in clinical and commercial quantities. Future FDA inspections may identify compliance issues at our facilities or at the facilities of our contract manufacturers that may disrupt production or distribution or require substantial resources to correct.

Discovery of problems with a product or failure to comply with the applicable United States requirements at any time during the product development process, approval process or after approval, may subject an applicant to administrative or judicial sanctions. These sanctions could include a clinical hold on or termination of studies, the FDA’s refusal to approve pending applications, license suspension or revocation, withdrawal of an approval, restriction on marketing, warning letters, product recalls, product seizures, total or partial suspension of production or distribution, injunctions, fines, civil penalties or criminal prosecution. Also, new government requirements may be established that could delay or prevent regulatory approval of our products under development.

Patent Challenge Process Regarding ANDAs

The Hatch-Waxman Act provides incentives for generic pharmaceutical manufacturers to challenge patents on branded pharmaceutical products and/or their methods of use, as well as to develop products comprising non-infringing forms of the patented drugs. The Hatch-Waxman legislation places significant burdens on the ANDA filer to ensure that such challenges are not frivolous, but also offers the opportunity for significant financial reward if the challenge is successful.

If there is a patent listed for the branded drug in the FDA’s Orange Book at the time of submission of the ANDA or at any time before the ANDA is approved and the generic company intends to market the generic equivalent prior to the expiration of that patent, the generic company includes a certification asserting that the patent is invalid, unenforceable and/or not infringed, a so-called “paragraph IV certification.”

After receiving notice from the FDA that its application is acceptable for review or immediately if the ANDA has been amended to include a paragraph IV certification after the application was submitted to the FDA, the company submitting a generic application is required to send the patent holder and the holder of the NDA for the brand-name drug a notice explaining why it believes that the patents in question are invalid, unenforceable or not infringed. Upon receipt of the notice from the generic applicant, the patent holder has 45 days during which to bring a patent infringement suit in federal district court against the generic applicant in order to obtain the 30 month automatic stay.

If a suit is commenced by the patent holder during the 45-day period, the Hatch-Waxman Act provides for an automatic stay on the FDA’s ability to grant final approval of the ANDA for the generic

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product. Patent holders may only obtain one 30 month stay with respect to patents that were listed at the time an ANDA was submitted. The period during which the FDA may not approve the ANDA and the patent challenger therefore may not market the generic product is 30 months, or such other period as may be ordered by the court. The 30-month period may or may not, and often does not, coincide with the timing of the resolution of the lawsuit or the expiration of a patent, but if the patent challenge is successful or the challenged patent expires during the 30-month period, the FDA may approve the generic drug for marketing, assuming there are no other obstacles to approval such as periods of non-patent exclusivity given to the NDA holder.

Under the Hatch-Waxman Act, any developer of a generic drug that is considered first to have submitted its ANDA for review by the FDA, and whose submission includes a paragraph IV certification, may be eligible to receive a 180-day period of generic market exclusivity. This period of market exclusivity may provide the patent challenger with the opportunity to earn a return on the risks taken and its legal and development costs and to build its market share before other generic competitors can enter the market. If the ANDA of the first applicant accepted for filing is withdrawn, the 180-day exclusivity period is forfeited and unavailable to any other applicant.

Foreign Regulation

In addition to regulations in the United States, we will be subject to a variety of foreign regulations governing clinical trials and commercial sales and distribution of our products. Whether or not we obtain FDA approval for a product, we must obtain approval of a product by the comparable regulatory authorities of foreign countries before we can commence clinical trials or marketing of the product in those countries. The approval process varies from country to country, and the time may be longer or shorter than that required for FDA approval. The requirements governing the conduct of clinical trials, product licensing, pricing and reimbursement vary greatly from country to country.

Under European Union regulatory systems, we may submit marketing authorizations either under a centralized or decentralized procedure. The centralized procedure provides for the grant of a single marketing authorization that is valid for all European Union member states. The decentralized procedure provides for mutual recognition of national approval decisions. Under this procedure, the holder of a national marketing authorization may submit an application to the remaining member states. Within 90 days of receiving the applications and assessment report, each member state must decide whether to recognize approval.

Related Matters

From time to time, legislation is drafted, introduced and passed in Congress that could significantly change the statutory provisions governing the approval, manufacturing and marketing of products regulated by the FDA. In addition, FDA regulations and guidance are often revised or reinterpreted by the agency in ways that may significantly affect our business and our products. It is impossible to predict whether legislative changes will be enacted, or FDA regulations, guidance or interpretations changed, or what the impact of such changes, if any, may be.

Hazardous Materials

Our research and development processes involve the controlled use of certain hazardous materials and chemicals, including radioactive materials and equipment. We are subject to federal, state and local laws and regulations governing the use, manufacture, storage, handling and disposal of hazardous materials and waste products. We do not expect the cost of complying with these laws and regulations to be material.

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Employees

We believe that our success will depend greatly on our ability to identify, attract and retain capable employees. As of December 31, 2005, we had 105 employees, including a total of 35 employees who hold M.D. or Ph.D. degrees. Our employees are not represented by any collective bargaining unit, and we believe our relations with our employees are good.

Item 1A.                 RISK FACTORS

Statements contained or incorporated by reference in this Annual Report on Form 10-K that are not based on historical fact are “forward-looking statements” within the meaning of the Private Securities Litigation Reform Act of 1995, Section 27A of the Securities Act of 1933, as amended, and Section 21E of the Exchange Act. These forward-looking statements regarding future events and our future results are based on current expectations, estimates, forecasts, and projections and the beliefs and assumptions of our management including, without limitation, our expectations regarding results of operations, selling, general and administrative expenses, research and development expenses, the sufficiency of our cash for future operations, and the success of our development programs. Forward-looking statements may be identified by the use of forward-looking terminology such as “believe,” “may,” “could,” “will,” “expect,” “estimate,” “anticipate,” “continue,” or similar terms, variations of such terms or the negative of those terms.

We cannot assure investors that our assumptions and expectations will prove to have been correct. Important factors could cause our actual results to differ materially from those indicated or implied by forward-looking statements. Such factors that could cause or contribute to such differences include those factors discussed below. We undertake no intention or obligation to update or revise any forward-looking statements, whether as a result of new information, future events or otherwise. If any of the following risks actually occur, our business, financial condition or results of operations would likely suffer.

Risks Relating to Our Business

We have a limited operating history and have incurred a cumulative loss since inception. If we do not generate significant revenues, we will not be profitable.

We have incurred significant losses since our inception in May 2001. At December 31, 2005, our accumulated deficit was approximately $73.6 million. We have not generated revenues from the sale of any products to date. We expect that our annual operating losses will increase over the next several years as we expand our drug commercialization, development and discovery efforts. To become profitable, we must successfully develop and obtain regulatory approval for our existing drug candidates, and effectively manufacture, market and sell any drugs we develop. Accordingly, we may never generate significant revenues and, even if we do generate significant revenues, we may never achieve profitability.

To become and remain profitable, we must succeed in developing and commercializing drugs with significant market potential. This will require us to be successful in a range of challenging activities: developing drugs; obtaining regulatory approval for them; and manufacturing, marketing and selling them. We may never succeed in these activities and may never generate revenues that are significant or large enough to achieve profitability. Even if we do achieve profitability, we may not be able to sustain or increase profitability on a quarterly or annual basis. Our failure to become and remain profitable would cause the market price of our common stock to decrease and could impair our ability to raise capital, expand our business, diversify our product offerings or continue our operations.

If we fail to obtain approval for and commercialize our most advanced product candidate, M-Enoxaparin, we may have to curtail our product development programs and our business would be materially harmed.

We have invested a significant portion of our time, financial resources and collaboration efforts in the development of our most advanced product candidate, M-Enoxaparin, a technology-enabled generic

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version of Lovenox. Our near-term ability to generate revenues and our future success, in large part, depends on the development and commercialization of M-Enoxaparin.

In accordance with our collaboration agreement with Sandoz, an ANDA was submitted to the FDA on August 29, 2005, seeking approval to market M-Enoxaparin in the United States. FDA approval of an ANDA is required before marketing of a generic equivalent of a drug previously approved under a New Drug Application, or NDA. If we are unable to satisfactorily demonstrate therapeutic equivalence, if the FDA disagrees with our characterization approach or does not agree that M-Enoxaparin is equivalent to Lovenox, or if we otherwise fail to meet FDA requirements for our ANDA, including but not limited to manufacturing and bioequivalence requirements, or obtain FDA approval for, and successfully commercialize, M-Enoxaparin, we may never realize revenue from this product and we may have to curtail our other product development programs. As a result, our business would be materially harmed.

We will likely face patent litigation with Sanofi-Aventis, the innovator of Lovenox.

Currently Sanofi-Aventis has two listed patents for Lovenox in the Orange Book, the FDA’s listing of approved drug products. These patents are U.S. Patent No. 5,389,618 or the ’618 Patent, and its counter-part, Reissue Patent No. 38,743, or the Reissue Patent. On June 14, 2005, the reissue patent issued and the original ’618 patent was surrendered by operation of law. Aventis has reported that the claims of the ’618 patent are identical to the corresponding claims of the Reissue Patent. That is, according to Aventis, by operation of law, the ’618 patent ceases to exist and has been replaced by the Reissue Patent. According to the Orange Book, the Reissue Patent expires February 14, 2012.

In June 2003, prior to issuance of the Reissue Patent, Sanofi-Aventis announced that it received individual notices from Amphastar Pharmaceuticals, Inc., or Amphastar, and Teva Pharmaceuticals USA, Inc., or Teva, indicating that each had submitted with the FDA its own ANDA for enoxaparin. According to Sanofi-Aventis, each ANDA included a paragraph IV certification, or a patent certification stating that the ’618 patent was either not infringed or was unenforceable or invalid. Amphastar and Teva submitted this patent certification because they were seeking from the FDA authorization to manufacture and market a generic version of Lovenox in the United States prior to the expiration of the ’618 patent. Submitting such certifications allowed Sanofi-Aventis to sue Amphastar and Teva for patent infringement of the ’618 patent in August 2003, even though Amphastar and Teva have neither obtained approval for nor marketed their generic versions of Lovenox in the United States. In response to Sanofi-Aventis’s lawsuit, Amphastar and Teva have asserted non-infringement, invalidity and/or unenforceability of the ’618 patent. They have also sought related declaratory judgment relief against Sanofi-Aventis. These lawsuits were consolidated and brought before the U.S. District Court for the Central District of California, or District Court.

On June 15, 2005, the District Court granted summary judgment to Amphastar finding that Sanofi-Aventis’ U.S. Patent No. 5,389,618 is unenforceable due to Sanofi-Aventis’ inequitable conduct before the United States Patent and Trademark Office, or USPTO.

Based on its June 15 th  decision, the District Court entered final judgment on Amphastar’s and Teva’s claims that U.S. Patent No. 5,389,618 and Reissue Patent No. RE38,743 are unenforceable on the grounds of inequitable conduct. The District Court entered final judgment on July 25, 2005.

In or about mid to late June 2005, Amphastar and Teva each amended their own ANDA to include a second paragraph IV certification stating that the Reissue Patent was either not infringed, unenforceable or invalid. Amphastar and Teva submitted these patent certifications because they were seeking from the FDA authorization to manufacture and market a generic version of Lovenox in the United States prior to the expiration of the Reissue Patent. Submitting such certifications allowed Sanofi-Aventis to sue Amphastar and Teva for patent infringement of the Reissue Patent in July 2005, even though Amphastar

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and Teva have neither obtained approval for nor marketed their generic versions of Lovenox in the United States.

In September 2005, Sanofi-Aventis filed an appeal of the District Court’s decision and final judgment of unenforceability based on inequitable conduct to the U.S. Court of Appeals for the Federal Circuit, or Court of Appeals. Oral argument was held on January 13, 2006. However, the Court of Appeals has not yet issued its decision. Intellectual property litigation involves many uncertainties, and there is no assurance that the Court of Appeals will affirm the District Court’s decision that the Reissue Patent is unenforceable due to inequitable conduct.

If the Court of Appeals does not affirm the District Court’s finding of inequitable conduct in connection with the ’618 Patent, and instead remands the District Court’s decision, we may experience delays in the commercialization of M-Enoxaparin. Further, if the matter is remanded and if a paragraph IV certification against the ’618 patent and Reissue Patent has been or will be filed with the ANDA for M-Enoxaparin, we will likely face costly and time consuming patent litigation with Sanofi-Aventis, the holder of the NDA for Lovenox.

Companies that produce branded pharmaceutical products for which there are unexpired patents listed in the FDA’s Orange Book most often bring patent infringement litigation against applicants seeking FDA approval to manufacture and market generic forms of their branded products before patent expiration. Under the circumstances described in the preceding paragraph, we will likely face patent litigation if a paragraph IV certification against the ‘618 patent and Reissue Patent has been or will be filed with our ANDA to produce and market a generic version of Lovenox. Litigation often involves significant expense and could delay or prevent the introduction of a generic product.

Under most circumstances, the decision as to when to begin marketing M-Enoxaparin will be determined jointly by us and Sandoz. Sandoz, however, has sole discretion over the decision as to when to begin marketing M-Enoxaparin under certain circumstances.

Sandoz has agreed to indemnify us for patent liability damages, subject to Sandoz’s ability to offset certain of these liabilities against the profit-sharing amounts, the royalties and the milestone payments otherwise due to us from the marketing of M-Enoxaparin. Intellectual property litigation involves many risks and uncertainties, and there is no assurance that we will prevail in any lawsuit brought by Sanofi-Aventis. In addition, Sanofi-Aventis has significantly greater resources than we do, and litigation with Sanofi-Aventis could last a number of years, potentially delaying or prohibiting the commercialization of M-Enoxaparin. If we are not successful in commercializing M-Enoxaparin or are significantly delayed in doing so, we may have to curtail our product development programs and our business would be materially harmed.

We utilize new technologies in the development of some of our products that have not been reviewed or accepted by regulatory authorities.

Some of our products in current or future development, including M-Enoxaparin, may be based on new technologies that have not previously been formally reviewed or accepted by the FDA or other regulatory authorities. Given the complexity of our technology, we intend to work closely with the FDA and other regulatory authorities to facilitate the requisite scientific analysis and evaluation of our methods in order to obtain regulatory approval for our products. It is possible that the validation process may take time and resources, require independent third-party analysis or not be accepted by the FDA and other regulatory authorities. For some of our products, the regulatory approval path and requirements may not be clear, which could add significant delay and expense. Delays or failure to obtain regulatory approval of any of the products that we develop would adversely affect our business.

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If other generic versions of Lovenox are approved and successfully commercialized our business would suffer.

In mid-2003, Amphastar and Teva each submitted ANDAs for generic versions of Lovenox with the FDA. Each ANDA included a paragraph IV certification. In addition, other third parties, including without limitation Sanofi-Aventis, may seek approval to market generic versions of Lovenox in the United States. It is an increasingly common practice for innovators such as Sanofi-Aventis to launch an authorized generic. If any of these parties obtain FDA approval for generic versions of Lovenox, we may not gain any competitive advantage and the price for the product may be lower. Also, we may never achieve significant market share for M-Enoxaparin if either Amphastar or Teva, or another third party, markets generic versions of Lovenox before us. Under the Hatch-Waxman Act, any developer of a generic drug that is considered first to have its ANDA accepted for review by the FDA, and whose submission includes a paragraph IV certification, may be eligible to receive a 180-day period of generic market exclusivity. In the event that any eligible 180-day exclusivity period has not begun and/or has not expired at the time we receive tentative approval for M-Enoxaparin, we may be forced to wait until the expiration of the exclusivity period before the FDA could make our approval effective. Less favorable economic terms could be triggered under our collaboration with Sandoz if one or more third parties commercialize a generic version of Lovenox. Consequently, if other generic versions of Lovenox are approved and commercialized, our revenues would be reduced and, as a result, our business, including our future discovery and development programs, would suffer.

If we experience manufacturing difficulties or are unable to obtain sufficient quantities of raw materials or manufacture sufficient quantities of M-Enoxaparin, our development and commercialization efforts may be materially harmed.

We have limited personnel with experience in, and we do not own facilities for, manufacturing any products. We depend upon third parties to provide for raw materials, to manufacture the drug substance, or active pharmaceutical ingredient, for M-Enoxaparin and to provide certain other services relating to M-Enoxaparin. We also depend on additional third parties to produce the final drug product and provide certain analytical services with respect to M-Enoxaparin. Manufacturing requirements, including but not limited to, reproducibility, validation and scale-up, must be addressed in order to satisfy FDA requirements necessary for approval and commercialization of M-Enoxaparin. In addition, if the product is approved, in order to produce M-Enoxaparin in the quantities necessary to meet anticipated market demand, we and any contract manufacturer that we engage may need to increase manufacturing capacity. If we are unable to satisfy the FDA requirements for approval or to produce M-Enoxaparin in sufficient quantities to meet the requirements for the launch of the product or to meet future demand, our revenues and gross margins could be adversely affected.

Our revenues and profits from any of our generic product candidates may decline if our competitors introduce their own generic equivalents.

In addition to general competition in the pharmaceutical market, we expect that certain of our generic product candidates may face intense and increasing competition from other manufacturers of generic and/or branded products. Revenues and gross profit derived from the sales of generic pharmaceutical products tend to follow a pattern based on certain regulatory and competitive factors. As patents for branded products and related exclusivity periods expire, manufacturers of generic products may receive regulatory approval for generic equivalents and may be able to achieve significant market penetration. As competing off-patent manufacturers receive regulatory approvals on similar products or as branded manufacturers launch authorized generic versions of such products, market share, revenues and gross profit typically decline, in some cases, dramatically. If any of our generic product offerings, including M-Enoxaparin, enter markets with a number of competitors, we may not achieve significant market share, revenues or gross profit. In addition, as other generic products are introduced to the markets in which we participate, the market share, revenues and gross profit of our generic products could decline.

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We will need to develop or acquire additional technologies as part of our efforts to analyze the chemical composition of complex mixtures other than heparins.

To date, our analytical techniques and methods have been primarily focused on the characterization of complex mixtures comprised of linear sugars, such as those found in the heparin class of drugs. In order to adequately analyze other complex mixtures, such as glycoproteins, we will need to develop or acquire new technologies. Our inability to develop or acquire and apply these new technologies would limit our ability to work with biotechnology companies to help them better understand the chemical composition of their products, impair our ability to assist biotechnology companies in developing improved and next generation versions of existing products, and limit our ability to perform the analysis that we believe may be required to enable follow-on or equivalent versions of these biologics. Our inability to develop or acquire additional technology for the characterization of complex mixtures other than heparins could reduce the likelihood of our success developing other products.

Competition in the biotechnology and pharmaceutical industries is intense, and if we are unable to compete effectively, our financial results will suffer.

The markets in which we intend to compete are undergoing, and are expected to continue to undergo, rapid and significant technological change. We expect competition to intensify as technological advances are made or new biotechnology products are introduced. New developments by competitors may render our current or future product candidates and/or technologies non-competitive, obsolete or not economical. Our competitors’ products may be more efficacious or marketed and sold more effectively than any of our products.

Many of our competitors have:

·        significantly greater financial, technical and human resources than we have at every stage of the discovery, development,  manufacturing and commercialization process;

·        more extensive experience in commercializing generic drugs, preclinical testing, conducting clinical trials, obtaining regulatory approvals, challenging patents and in manufacturing and marketing pharmaceutical products;

·        products that have been approved or are in late stages of development; and

·        collaborative arrangements in our target markets with leading companies and research institutions.

If we successfully develop and obtain approval for our drug candidates, we will face competition based on many different factors, including:

·        the safety and effectiveness of our products;

·        the timing and scope of regulatory approvals for these products;

·        the availability and cost of manufacturing, marketing and sales capabilities;

·        the effectiveness of our marketing and sales capabilities;

·        the price of our products;

·        the availability and amount of third-party reimbursement for our products; and

·        the strength of our patent position.

Our competitors may develop or commercialize products with significant advantages in regard to any of these factors. Our competitors may therefore be more successful in commercializing their products than we are, which could adversely affect our competitive position and business.

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If we are unable to establish and maintain our key customer arrangements, sales of our products and revenues would decline.

Generic pharmaceutical products are sold through various channels, including retail and mail order, and to hospitals through group purchasing organizations, or GPOs. As M-Enoxaparin is primarily a hospital-based product, we expect to derive a large percentage of our future revenue for M-Enoxaparin through contracts with GPOs. Currently, a relatively small number of GPOs control a substantial portion of generic pharmaceutical sales to hospital customers. In order to establish and maintain contracts with these GPOs, we believe that we, in collaboration with Sandoz, will need to maintain adequate drug supplies, remain price competitive, comply with FDA regulations and provide high-quality products. The GPOs with whom we hope to establish contracts may also have relationships with our competitors and may decide to contract for or otherwise prefer products other than ours, limiting access of M-Enoxaparin to certain hospital segments. Our sales could also be negatively affected by any rebates, discounts, and fees that are required by our customers, including the GPOs, wholesalers, distributors, retail chains or mail order services, to gain and retain market acceptance for our products. If we are unable to establish and maintain arrangements with all of these customers, future sales of our products, revenues and profits would suffer.

Even if we receive approval to market our drug candidates, the market may not be receptive to our drug candidates upon their commercial introduction, which could prevent us from being profitable.

Even if our drug candidates are successfully developed, our success and growth will also depend upon the acceptance of these drug candidates by physicians and third-party payors. Acceptance of our product development candidates will be a function of our products being clinically useful, being cost effective and demonstrating superior therapeutic effect with an acceptable side effect profile as compared to existing or future treatments. In addition, even if our products achieve market acceptance, we may not be able to maintain that market acceptance over time.

Factors that we believe will materially affect market acceptance of our drug candidates under development include:

·        the timing of our receipt of any marketing approvals, the terms of any approval and the countries in which approvals are obtained;

·        the safety, efficacy and ease of administration of our products;

·        the competitive pricing of our products;

·        the success of our physician education and marketing programs;

·        the sales and marketing efforts of competitors; and

·        the availability and amount of government and third-party payor reimbursement.

If our products do not achieve market acceptance, we will not be able to generate sufficient revenues from product sales to maintain or grow our business.

We will require substantial additional funds to execute our business plan and, if additional capital is not available, we may need to limit, scale back or cease our operations.

As of December 31, 2005, we had cash, cash equivalents and marketable securities totaling $156.3 million. For the twelve months ended December 31, 2005, we had a net loss of $21.7 million and used cash in operating activities of $17.0 million. We will continue to require substantial funds to conduct research and development, process development, manufacturing, preclinical testing and clinical trials of our drug candidates, as well as funds necessary to manufacture and market any products that are approved for

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commercial sale. Because successful development of our drug candidates is uncertain, we are unable to estimate the actual funds we will require to complete research and development and commercialize our products under development.

Our future capital requirements may vary depending on the following:

·        the advancement of our generic product candidates and other development programs;

·        the cost of litigation, including potential patent litigation with Sanofi-Aventis relating to Lovenox that is not otherwise covered by our collaboration agreement, or potential patent litigation with others, as well as any damages, including possibly treble damages, that may be owed to Sanofi-Aventis or others should we be unsuccessful in such litigation;

·        the time and costs involved in obtaining regulatory approvals;

·        the continued progress in our research and development programs, including completion of our preclinical studies and clinical trials;

·        the potential acquisition and in-licensing of other technologies, products or assets; and

·        the cost of manufacturing, marketing and sales activities, if any.

We may seek additional funding in the future and intend to do so through collaborative arrangements and public or private equity and debt financings. Additional funds may not be available to us on acceptable terms or at all. In addition, the terms of any financing may adversely affect the holdings or the rights of our stockholders. If we are unable to obtain funding on a timely basis, we may be required to significantly curtail one or more of our research or development programs. We also could be required to seek funds through arrangements with collaborators or others that may require us to relinquish rights to some of our technologies, product candidates or products which we would otherwise pursue on our own.

If we are not able to retain our current senior management team or attract and retain qualified scientific, technical and business personnel, our business will suffer.

We are dependent on the members of our senior management team, for our business success. Our employment arrangements with our executive officers are terminable by either party on short notice or no notice. We do not carry life insurance on the lives of any of our personnel. The loss of any of our executive officers would result in a significant loss in the knowledge and experience that we, as an organization, possess and could cause significant delays, or outright failure, in the development and approval of our product candidates. In addition, our growth will require us to hire a significant number of qualified scientific, commercial and administrative personnel. There is intense competition from numerous pharmaceutical and biotechnology companies, universities, governmental entities and other research institutions, for human resources, including management, in the technical fields in which we operate, and we may not be able to attract and retain qualified personnel necessary for the successful development and commercialization of our product candidates.

There is a substantial risk of product liability claims in our business. If our existing product liability insurance is insufficient, a product liability claim against us that exceeds the amount of our insurance coverage could adversely affect our business.

Our business exposes us to significant potential product liability risks that are inherent in the development, manufacturing and marketing of human therapeutic products. Product liability claims could delay or prevent completion of our development programs, clinical or otherwise. If we succeed in marketing products, such claims could result in a recall of our products or a change in the indications for which they may be used. While we currently maintain product liability insurance coverage that we believe is adequate for our current operations, we cannot be sure that such coverage will be adequate to cover any

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incident or all incidents. Furthermore, clinical trial and product liability insurance is becoming increasingly expensive. As a result, we may be unable to maintain sufficient insurance at a reasonable cost to protect us against losses that could have a material adverse effect on our business. These liabilities could prevent or interfere with our product development and commercialization efforts.

As we evolve from a company primarily involved in drug discovery and development into one that is also involved in the commercialization of drug products, we may have difficulty managing our growth and expanding our operations successfully.

As we advance our drug candidates through the development process, we will need to expand our development, regulatory, manufacturing, sales and marketing capabilities or contract with other organizations to provide these capabilities for us. As our operations expand, we expect that we will need to manage additional relationships with various collaborative partners, suppliers and other organizations. Our ability to manage our operations and growth requires us to continue to improve our operational, financial and management controls, reporting systems and procedures. Such growth could place a strain on our administrative and operational infrastructure. We may not be able to make improvements to our management information and control systems in an efficient or timely manner and may discover deficiencies in existing systems and controls.

Acquisitions present many risks, and we may not realize the anticipated financial and strategic goals for any such transactions.

We may in the future acquire complementary companies, products and technologies. Such acquisitions involve a number of risks, including:

·        we may find that the acquired company or assets do not further our business strategy, or that we overpaid for the company or assets, or that economic conditions change, all of which may generate a future impairment charge;

·        we may have difficulty integrating the operations and personnel of the acquired business, and may have difficulty retaining the key personnel of the acquired business;

·        we may have difficulty incorporating the acquired technologies;

·        we may encounter technical difficulties or failures with the performance of the acquired technologies or drug products;

·        we may face product liability risks associated with the sale of the acquired company’s products;

·        our ongoing business and management’s attention may be disrupted or diverted by transition or integration issues and the complexity of managing diverse locations;

·        we may have difficulty maintaining uniform standards, internal controls, procedures and policies across locations;

·        the acquisition may result in litigation from terminated employees or third-parties; and

·        we may experience significant problems or liabilities associated with product quality, technology and legal contingencies.

These factors could have a material adverse effect on our business, results of operations and financial condition or cash flows, particularly in the case of a larger acquisition or multiple acquisitions in a short period of time. From time to time, we may enter into negotiations for acquisitions that are not ultimately consummated. Such negotiations could result in significant diversion of management time, as well as out-of-pocket costs.

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The consideration paid in connection with an acquisition also affects our financial results. If we were to proceed with one or more significant acquisitions in which the consideration included cash, we could be required to use a substantial portion of our available cash to consummate any acquisition. To the extent we issue shares of stock or other rights to purchase stock, including options or other rights, existing stockholders may be diluted and earnings per share may decrease. In addition, acquisitions may result in the incurrence of debt, large one-time write-offs (such as acquired in-process research and development costs) and restructuring charges. They may also result in goodwill and other intangible assets that are subject to impairment tests, which could result in future impairment charges.

Changes in stock option accounting rules may have a significant adverse affect on our operating results

We have a history of using broad-based employee stock option programs to hire, provide incentives for, and retain our workforce in a competitive marketplace. Statement of Financial Accounting Standards No. 123, “Accounting for Stock-Based Compensation,” allows companies the choice of either using a fair value method of accounting for options that would result in expense recognition for all options granted, or using an intrinsic value method, as prescribed by Accounting Principles Board Opinion No. 25, “Accounting for Stock Issued to Employees,” or APB 25, with a pro forma disclosure of the impact on net income (loss) of using the fair value option expense recognition method. We have elected to apply APB 25, and, accordingly, we generally have not recognized any expense with respect to employee stock options as long as such options are granted at exercise prices equal to the fair value of our common stock on the date of grant.

In December 2004, the Financial Accounting Standards Board issued “Share-Based Payment,” or Statement 123(R). Statement 123(R) requires that the compensation cost relating to share-based payment transactions be recognized in financial statements. That cost will be measured based on the fair value of the equity instruments issued. In determining the fair value of options and other equity-based awards, companies may use different valuation models that may involve extensive and complex analysis. Statement 123(R) is effective for us beginning January 1, 2006, which is the first day of our 2006 fiscal year. The Company has adopted the “modified prospective method” when applying Statement 123(R). The Company currently expects stock option expense for 2006 to be in a range of $5 million to $6 million dependent upon assumptions used in estimating the fair value, market price and levels of share-based payments granted in 2006. Any changes from current assumptions could result in significant variation from the Company’s current estimate.

Risks Relating to Development and Regulatory Approval

If we are not able to demonstrate therapeutic equivalence for our generic versions of complex drugs, including M-Enoxaparin, to the satisfaction of the FDA, we will not obtain regulatory approval for commercial sale of our generic product candidates, and our future results of operations will be adversely affected.

Our future results of operations depend, to a significant degree, on our ability to obtain regulatory approval for and commercialize generic versions of complex drugs, including M-Enoxaparin. To obtain regulatory approval for the commercial sale of our generic versions of complex drugs, including M-Enoxaparin, we will be required to demonstrate to the satisfaction of the FDA, among other things, that our generic products contain the same active ingredients, are of the same dosage strength, form, and route of administration as the branded products upon which they are based, and meet compendial or other applicable standards for strength, quality, purity and identity, including potency. Our generic versions of complex drugs, including M-Enoxaparin and M-Dalteparin (if we elect to pursue), must also be demonstrated through in vivo studies to be bioequivalent, meaning generally that there are no significant differences between the generic drug and its branded counterpart with respect to the rate and extent to which the active ingredients are absorbed and become available at the site of drug action.

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Determination of the same active ingredients for our generic versions of complex drugs will be based on our demonstration of chemical equivalence to the respective reference listed drugs. The FDA may not agree that we have adequately characterized our products or that our products are equivalent to their respective branded drugs. The FDA may require confirmatory information including, for example, animal or human testing, to determine the sameness of active ingredients and that any inactive ingredients or impurities do not compromise the product’s safety and efficacy. Provision of sufficient information for approval may prove difficult, time consuming and expensive. We must also demonstrate the adequacy of our methods, controls and facilities used in the manufacture of the product, including that they meet current good manufacturing practices, or cGMP. We cannot predict whether any of our generic product candidates will meet FDA requirements for approval.

In the event that the FDA modifies its current standards for therapeutic equivalence with respect to generic versions of Lovenox or other complex drug products, does not establish standards for therapeutic equivalence for generic versions of complex drug products, or requires us to conduct clinical trials or other lengthy processes, the commercialization of our technology-enabled generic product candidates could be delayed or prevented. Delays in any part of the process or our inability to obtain regulatory approval for our products could adversely affect our operating results by restricting or significantly delaying our introduction of new products.

If the FDA is not able to establish specific guidelines or arrive at a consensus regarding the scientific analyses required for characterizing complex protein drugs, and if the U.S. Congress does not take action to create an abbreviated regulatory pathway for follow-on protein products, then the uncertainty about the value of our glycoprotein program will be increased.

The regulatory climate for generic versions of protein products remains very uncertain. Currently, there is no established statutory or regulatory pathway which provides the FDA with the authority to approve generic versions of most protein drugs. Most therapeutic protein drugs were approved by the FDA under the Public Health Service Act through the use of Biologics License Applications, or BLAs. Unlike products approved through the use of NDAs, there is no provision in the Public Health Service Act for an abbreviated application that would permit approval of a follow-on protein product, and the FDA has stated it does not believe it has the authority to rely on prior BLA approvals or on their underlying data to approve a follow-on product. Moreover, even for proteins originally approved as NDAs, there is debate as to the data necessary to demonstrate the sameness required for ANDA approval. Judicial construction of the current law may impact the approval process for generic versions of proteins originally approved as NDAs. For example, the FDA was recently sued in the United States District Court for the District of Columbia and the court was asked to enter a declaratory judgment that the section 505(b)(2) NDA pathway can be used for protein-based biologic drugs regulated under section 505 of the Federal Food, Drug, and Cosmetic Act. Although the FDA stated in February 2005 that it anticipated drafting several guidances and concept papers to address the scientific and regulatory issues related to approval of generic versions of therapeutic protein products that were approved under BLAs, the FDA indicated at the time that the development of many of these documents would take several months or more. To our knowledge, the agency has not yet officially issued any guidance, or specified a time frame in which it expects to do so. Failure of the FDA to establish standards or the U.S. Congress to enact legislation establishing a pathway for regulatory approval could reduce the value of our glycoprotein program.

If our preclinical studies and clinical trials for our development candidates are not successful, we will not be able to obtain regulatory approval for commercial sale of our novel or improved drug candidates.

To obtain regulatory approval for the commercial sale of our novel or improved drug candidates, we will be required to demonstrate through preclinical studies and clinical trials that our drug development candidates are safe and effective. Preclinical testing and clinical trials of new development candidates are lengthy and expensive and the historical failure rate for development candidates is high. The results from

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preclinical testing of a development candidate may not predict the results that will be obtained in human clinical trials. Clinical trials cannot commence until we submit an IND containing sufficient preclinical data and other information to support use in human subjects and the FDA allows the trials to go forward. Clinical trials must also be reviewed and approved by institutional review boards, or IRBs, for each clinical trial site before a development candidate may be used in a human trial at that site. We, the FDA or other applicable regulatory authorities or an IRB may prohibit the initiation of, or suspend clinical trials of, a development candidate at any time if we or they believe the subjects or patients participating in such trials are being exposed to unacceptable health risks, or for other reasons. Adverse side effects of a development candidate on subjects or patients in a clinical trial could result in the FDA or other regulatory authorities refusing to approve a particular development candidate for any or all indications of use.

Clinical trials of a new development candidate require the enrollment of a sufficient number of patients who are suffering from the disease the development candidate is intended to treat and who meet other eligibility criteria. Rates of patient enrollment are affected by many factors, including the size of the patient population, the nature of the protocol, the proximity of patients to clinical sites, the availability of effective treatments for the relevant disease and the eligibility criteria for the clinical trial. Lower than anticipated patient enrollment rates, high drop-out rates or inadequate drug supply or other materials can result in increased costs and longer development times.

We cannot predict whether any of our development candidates will encounter problems during clinical trials which will cause us or regulatory authorities to delay or suspend these trials, or which will delay the analysis of data from these trials. In addition, it is impossible to predict whether legislative changes will be enacted, or whether FDA regulations, guidance or interpretations will be changed, or what the impact of such changes, if any, may be. If we experience any such problems, we may not have the financial resources to continue development of the drug candidate that is affected or the development of any of our other drug candidates.

Failure to obtain regulatory approval in foreign jurisdictions would prevent us from marketing our products abroad.

Although we have not initiated any marketing efforts in foreign jurisdictions, we intend in the future to market our products outside the United States. In order to market our products in the European Union and many other foreign jurisdictions, we must obtain separate regulatory approvals and comply with numerous and varying regulatory requirements. The approval procedure varies among countries and can involve additional testing. The time required to obtain approval abroad may differ from that required to obtain FDA approval. The foreign regulatory approval process may include all of the risks associated with obtaining FDA approval, and we may not obtain foreign regulatory approvals on a timely basis, if at all. Approval by the FDA does not ensure approval by regulatory authorities in other countries, and approval by one foreign regulatory authority does not ensure approval by regulatory authorities in other foreign countries or by the FDA. We and our collaborators may not be able to file for regulatory approvals and may not receive necessary approvals to commercialize our products in any market outside the United States. The failure to obtain these approvals could materially adversely affect our business, financial condition and results of operations.

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Even if we obtain regulatory approvals, our marketed drugs will be subject to ongoing regulatory review. If we fail to comply with continuing United States and foreign regulations, we could lose our approvals to market drugs and our business would be seriously harmed.

Even after approval, any drugs we develop will be subject to ongoing regulatory review, including the review of clinical results which are reported after our drug products are made commercially available. In addition, the manufacturer and manufacturing facilities we use to produce any of our drug candidates will be subject to periodic review and inspection by the FDA. We will be required to report any serious and unexpected adverse experiences and certain quality problems with our products and make other periodic reports to the FDA. The discovery of any previously unknown problems with the product, manufacturer or facility may result in restrictions on the drug or manufacturer or facility, including withdrawal of the drug from the market. Certain changes to an approved product, including in the way it is manufactured or promoted, often require prior FDA approval before the product as modified may be marketed. If we fail to comply with applicable continuing regulatory requirements, we may be subject to warning letters, civil penalties, suspension or withdrawal of regulatory approvals, product recalls and seizures, injunctions, operating restrictions and/or criminal prosecutions and penalties.

If third-party payors do not adequately reimburse customers for any of our product candidates that are approved for marketing, they might not be purchased or used, and our revenues and profits will not develop or increase.

Our revenues and profits will depend heavily upon the availability of adequate reimbursement for the use of our approved product candidates from governmental and other third-party payors, both in the United States and in foreign markets. Reimbursement by a third-party payor may depend upon a number of factors, including the third-party payor’s determination that use of a product is:

·        a covered benefit under its health plan;

·        safe, effective and medically necessary;

·        appropriate for the specific patient;

·        cost-effective; and

·        neither experimental nor investigational.

Obtaining reimbursement approval for a product from each government or other third-party payor is a time-consuming and costly process that could require us to provide supporting scientific, clinical and cost-effectiveness data for the use of our products to each payor. We may not be able to provide data sufficient to gain acceptance with respect to reimbursement. There is substantial uncertainty whether any particular payor will reimburse the use of any drug products incorporating new technology. Even when a payor determines that a product is eligible for reimbursement, the payor may impose coverage limitations that preclude payment for some uses that are approved by the FDA or comparable authority. Moreover, eligibility for coverage does not imply that any product will be reimbursed in all cases or at a rate that allows us to make a profit or even cover our costs. Interim payments for new products, if applicable, may also not be sufficient to cover our costs and may not be made permanent. Reimbursement rates may vary according to the use of the product and the clinical setting in which it is used, may be based on payments allowed for lower-cost products that are already reimbursed, may be incorporated into existing payments for other products or services, and may reflect budgetary constraints and/or imperfections in Medicare, Medicaid or other data used to calculate these rates. Net prices for products may be reduced by mandatory discounts or rebates required by government health care programs or by any future relaxation of laws that restrict imports of certain medical products from countries where they may be sold at lower prices than in the United States.

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There have been, and we expect that there will continue to be, federal and state proposals to constrain expenditures for medical products and services, which may affect payments for our products. The Centers for Medicare and Medicaid Services, or CMS, frequently change product descriptors, coverage policies, product and service codes, payment methodologies and reimbursement values. Third-party payors often follow Medicare coverage policy and payment limitations in setting their own reimbursement rates, and both CMS and other third-party payors may have sufficient market power to demand significant price reductions. Due in part to actions by third-party payors, the health care industry is experiencing a trend toward containing or reducing costs through various means, including lowering reimbursement rates, limiting therapeutic class coverage and negotiating reduced payment schedules with service providers for drug products.

Our inability to promptly obtain coverage and profitable reimbursement rates from government-funded and private payors for our products could have a material adverse effect on our operating results and our overall financial condition.

New federal legislation will increase the pressure to reduce prices of pharmaceutical products paid for by Medicare, which could adversely affect our revenues, if any.

The Medicare Prescription Drug Improvement and Modernization Act of 2003, or MMA, changes the way Medicare covers and reimburses for pharmaceutical products. The legislation introduced a new reimbursement methodology based on average sales prices for drugs that are used in hospital settings or under the direct supervision of a physician and, starting in 2006, expands Medicare coverage for drug purchases by the elderly. In addition, the MMA requires the creation of formularies for self-administered drugs, and provides authority for limiting the number of drugs that will be covered in any therapeutic class and provides for plan sponsors to negotiate prices with manufacturers and suppliers of covered drugs. As a result of the MMA and the expansion of federal coverage of drug products, we expect continuing pressure to contain and reduce costs of pharmaceutical products. Cost reduction initiatives and other provisions of this legislation could decrease the coverage and price that we receive for our products and could materially adversely affect our operating results and overall financial condition. While the MMA applies only to drug benefits for Medicare beneficiaries, private payors often follow Medicare coverage policy and payment limitations in setting their own reimbursement policies, and any reduction in coverage or payment that results from the MMA may result in a similar reduction in coverage or payments from private payors.

Congress has considered separate legislation, which if enacted, would permit more widespread re-importation of drugs from foreign countries into the United States and which may include re-importation from foreign countries where drugs are frequently sold at lower prices than in the United States. Such legislation, or similar regulatory changes, could decrease the amount of reimbursement we receive for any approved products which, in turn, could materially adversely affect our operating results and our overall financial condition.

If legislative and regulatory lobbying efforts by manufacturers of branded products to limit the use of generics are successful, our sales of technology-enabled generic products may suffer.

Many manufacturers of branded products have increasingly used both state and federal legislative and regulatory means to delay competition from manufacturers of generic drugs. These efforts have included:

·        pursuing new patents for existing products which may be granted just before the expiration of one patent, which could extend patent protection for a number of years or otherwise delay the launch of generic drugs;

·        submitting Citizen Petitions to request the Commissioner of Food and Drugs to take administrative action with respect to prospective and submitted generic drug applications;

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·        seeking changes to the United States Pharmacopeia, an industry recognized compilation of drug standards;

·        revising labels of existing products to reflect more specific descriptions of a drug; and

·        attaching special patent extension amendments to unrelated federal legislation.

In addition, some manufacturers of branded products have engaged in state-by-state initiatives to enact legislation that restrict the substitution of some branded drugs with generic drugs. If these efforts to delay or block competition are successful, we may be unable to sell our generic products, which could have a material adverse effect on our sales and profitability.

Foreign governments tend to impose strict price controls, which may adversely affect our revenues, if any.

In some foreign countries, particularly the countries of the European Union, the pricing of prescription pharmaceuticals is subject to governmental control. In these countries, pricing negotiations with governmental authorities can take considerable time after the receipt of marketing approval for a product. To obtain reimbursement or pricing approval in some countries, we may be required to conduct a clinical trial that compares the cost-effectiveness of our product candidate to other available therapies. If reimbursement of our products is unavailable or limited in scope or amount, or if pricing is set at unsatisfactory levels, our business could be adversely affected.

If we do not comply with laws regulating the protection of the environment and health and human safety, our business could be adversely affected.

Our research and development involves, and may in the future involve, the use of hazardous materials and chemicals and certain radioactive materials and related equipment. For the years ended December 31, 2005, 2004, and 2003, we spent approximately $19,000, $25,000, and $17,500, respectively, in order to comply with environmental and waste disposal regulations. Although we believe that our safety procedures for handling and disposing of these materials comply with the standards mandated by state and federal regulations, the risk of accidental contamination or injury from these materials cannot be eliminated. If an accident occurs, we could be held liable for resulting damages, which could be substantial. We are also subject to numerous environmental, health and workplace safety laws and regulations, including those governing laboratory procedures, exposure to blood-borne pathogens and the handling of biohazardous materials. Although we maintain workers’ compensation insurance as prescribed by the Commonwealth of Massachusetts to cover us for costs and expenses we may incur due to injuries to our employees resulting from the use of these materials, this insurance may not provide adequate coverage against potential liabilities. For claims not covered by workers’ compensation insurance, we also maintain an employer’s liability insurance policy in the amount of $3.5 million per occurrence and in the aggregate. We do not maintain insurance for environmental liability or toxic tort claims that may be asserted against us. Additional federal, state and local laws and regulations affecting our operations may be adopted in the future. We may incur substantial costs to comply with, and substantial fines or penalties if we violate, any of these laws or regulations.

Risks Relating to Our Dependence on Third Parties

Our collaboration with Sandoz is important to our business. If Sandoz fails to adequately perform under our collaboration or terminates our collaboration, the development and commercialization of injectable enoxaparin would be delayed or terminated and our business would be adversely affected.

In November 2003, we entered into a collaboration and license agreement with Sandoz to jointly develop and commercialize injectable enoxaparin and certain improved injectable forms of enoxaparin. Under the terms of the agreement, we and Sandoz agree to exclusively work with each other in the

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development and commercialization of injectable enoxaparin within the United States. We have also granted to Sandoz the right to negotiate additional rights for certain products under certain circumstances. If Sandoz fails to adequately perform under our collaboration and license agreement, we may not successfully commercialize M-Enoxaparin and may be precluded from seeking alternative collaborative opportunities because of our exclusivity commitment.

Sandoz may terminate our collaboration agreement for material uncured breaches or certain events of bankruptcy or insolvency by us. Sandoz may also terminate the collaboration agreement if the product or the market lacks commercial viability, if new laws or regulations are passed or court decisions rendered that substantially diminish our legal avenues for redress, or, in multiple cases, if certain costs exceed mutually agreed upon limits. If Sandoz terminates the agreement other than due to our uncured breach, we will be granted an exclusive license under certain intellectual property of Sandoz to develop and commercialize injectable enoxaparin in the United States. In that event, we would need to expand our internal capabilities or enter into another collaboration. In such event, significant delays would likely occur that could prevent us from completing the development and commercialization of injectable enoxaparin.

If Sandoz terminates the agreement due to our uncured breach, Sandoz would retain the exclusive right to develop and commercialize injectable enoxaparin in the United States. In that event, although the profit sharing, royalty and milestone payment obligations of Sandoz would survive, we would no longer have any influence over the development or commercialization strategy. In addition, if Sandoz were to terminate the agreement due to our uncured breach, Sandoz would retain its rights of first negotiation with respect to certain of our other products in certain circumstances and its rights of first refusal outside of the United States. Accordingly, if Sandoz terminates the agreement, our introduction of M-Enoxaparin may be significantly delayed, we may decide to discontinue the M-Enoxaparin project, or our revenues may be reduced, any one of which could have a material adverse effect on our business.

We depend on third-parties for the manufacture of products. If in the future we encounter difficulties in our supply or manufacturing arrangements, our business may be materially adversely affected.

We have limited personnel with experience in, and we do not own facilities for, manufacturing any products. In addition, we do not have, and do not intend to develop, the ability to manufacture material for our clinical trials or at commercial scale. To develop our drug candidates, apply for regulatory approvals and commercialize any products, we or our partners need to contract for or otherwise arrange for the necessary manufacturing facilities and capabilities. As a result, we expect generally to rely on contract manufacturers for regulatory compliance. If our contract manufacturers were to breach or terminate their manufacturing arrangements with us, the development or commercialization of the affected products or drug candidates could be delayed, which could have a material adverse effect on our business. In addition, any change in our manufacturers could be costly because the commercial terms of any new arrangement could be less favorable and because the expenses relating to the transfer of necessary technology and processes could be significant.

We have relied upon third parties to produce material for preclinical studies and may continue to do so in the future. Although we believe that we will not have any material supply issues, we cannot be certain that we will be able to obtain long-term supply arrangements of those materials on acceptable terms, if at all. If we are unable to arrange for third-party manufacturing, or to do so on commercially reasonable terms, we may not be able to complete development of our products or market them.

In addition, the FDA and other regulatory authorities require that our products be manufactured according to cGMP regulations. Any failure by us or our third-party manufacturers to comply with cGMP, and/or our failure to scale-up our manufacturing processes could lead to a delay in, or failure to obtain, regulatory approval. In addition, such failure could be the basis for action by the FDA to withdraw approvals for drug candidates previously granted to us and for other regulatory action. To the extent we

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rely on a third-party manufacturer, the risk of non-compliance with cGMPs may be greater and the ability to effect corrective actions for any such noncompliance may be compromised or delayed.

We may need to enter into alliances with other companies that can provide capabilities and funds for the development and commercialization of our drug candidates. If we are unsuccessful in forming or maintaining these alliances on favorable terms, our business could be adversely affected.

Because we have limited or no capabilities for drug development, manufacturing, sales, marketing and distribution, we may need to enter into alliances with other companies that can assist with the development and commercialization of our drug candidates. We may, for example, form alliances with major pharmaceutical companies to jointly develop specific drug candidates and to jointly commercialize them if they are approved. In such alliances, we would expect our pharmaceutical company partners to provide substantial capabilities in clinical development, manufacturing, regulatory affairs, sales and marketing. We may not be successful in entering into any such alliances. Even if we do succeed in securing such alliances, we may not be able to maintain them if, for example, development or approval of a drug candidate is delayed or sales of an approved drug are disappointing. If we are unable to secure or maintain such alliances we may not have the capabilities necessary to continue or complete development of our drug candidates and bring them to market, which may have an adverse effect on our business.

In addition to relying on a third party for its capabilities, we may depend on our alliances with other companies to provide substantial additional funding for development and potential commercialization of our drug candidates. We may not be able to obtain funding on favorable terms from these alliances, and if we are not successful in doing so, we may not have sufficient funds to develop a particular drug candidate internally, or to bring drug candidates to market. Failure to bring our drug candidates to market will prevent us from generating sales revenues, and this may substantially harm our business. Furthermore, any delay in entering into these alliances could delay the development and commercialization of our drug candidates and reduce their competitiveness even if they reach the market. As a result, our business may be adversely affected.

We enter into collaboration agreements and other similar contracts with other companies to supplement and enhance our own capabilities. If we are unable to enter into such agreements with companies or if any collaborative partner terminates or fails to perform its obligations under agreements with us, the development and commercialization of our drug candidates could be delayed or terminated.

Our continued and expected dependence on collaborative partners for their drug development, manufacturing, sales, marketing and distribution capabilities, for their financial support and/or to supplement and enhance our own proprietary technology platform, means that our business would be adversely affected if a partner terminates its collaboration agreement with us or fails to perform its obligations under the agreement. Our current collaborations and future collaborations, if any, may not be scientifically or commercially successful. Factors that may affect the success of our collaborations include the following:

·        disputes may arise in the future with respect to the ownership of rights to technology developed with collaborators;

·        our collaborators may pursue alternative technologies or develop alternative products, either on their own or in collaboration with others, that may be competitive with the products on which they are collaborating with us or which could affect our collaborators’ commitment to our collaborations;

·        our collaborators may terminate their collaborations with us, which could make it difficult for us to attract new collaborators or adversely affect how we are perceived in the business and financial communities;

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·        our collaborators may pursue higher-priority programs or change the focus of their development programs, which could affect the collaborators’ commitment to us; and

·        our collaborators with marketing rights may choose to devote fewer resources to the marketing of our product candidates, if any are approved for marketing, than to products from their own development programs.

If any of these occur, the development and commercialization of one or more drug candidates could be delayed, curtailed or terminated because we may not have sufficient financial resources or capabilities to continue such development and commercialization.

We enter into technology collaboration agreements and other similar contracts with other companies to supplement and enhance our own proprietary technology platform. If we are unsuccessful in forming or maintaining these collaborations on favorable terms or if the arrangements do not yield the intended results, our business could be adversely affected.

In an effort to continually update and enhance our proprietary technology platform we enter into agreements with other companies to develop, license, acquire and/or collaborate on various technologies. If we are unable to enter into the desired agreements, if the agreements do not yield the intended results or if the agreements terminate, we may need to find alternative approaches to such technology needs. This may result in delays and our business may be adversely affected.

If we are unable to establish sales and marketing capabilities or enter into agreements with third parties to market and sell our product candidates, we may be unable to generate product revenues.

We do not have a sales organization and have no experience as a company in the sales, marketing and distribution of pharmaceutical products. There are risks involved with establishing our own sales and marketing capabilities, as well as entering into arrangements with third parties to perform these services. For example, developing a sales force is expensive and time consuming and could delay any product launch. In addition, to the extent that we enter into arrangements with third parties to perform sales, marketing and distribution services, we will have less control over sales of our products, and our future revenues would depend heavily on the success of the efforts of these third parties.

Our collaborations with outside scientists and consultants may be subject to restriction and change.

We work with chemists, biologists and other scientists at academic and other institutions, and consultants who assist us in our research, development, regulatory and commercial efforts. These scientists and consultants have provided, and we expect that they will continue to provide, valuable advice on our programs. These scientists and consultants are not our employees, may have other commitments that would limit their future availability to us and typically will not enter into non-compete agreements with us. If a conflict of interest arises between their work for us and their work for another entity, we may lose their services. In addition, we will be unable to prevent them from establishing competing businesses or developing competing products.

We enter into various contracts in the normal course of our business that periodically incorporate provisions whereby we indemnify the other party to the contract. In the event we would have to perform under these indemnification provisions, it could have a material adverse effect on our business, financial position and results of operations.

In the normal course of business, we periodically enter into academic, commercial and consulting agreements that contain indemnification provisions. With respect to our academic agreements, we typically indemnify the institution and related parties from losses arising from claims relating to the products, processes or services made, used, sold or performed pursuant to the agreements for which we have secured

40




licenses, and from claims arising from our or our sublicensees’ exercise of rights under the agreement. With respect to our commercial agreements, including those with contract manufacturers, we indemnify our vendors from third-party product liability claims which result from the production, use or consumption of the product, as well as for certain alleged infringements of any patent or other intellectual property right by a third party. With respect to consultants, we indemnify them from claims arising from the good faith performance of their services. We do not, however, typically indemnify parties for claims resulting from the gross negligence or willful misconduct of the indemnified party.

We maintain insurance coverage which we believe may limit our obligations under these indemnification provisions. With respect to M-Enoxaparin, we are also protected under certain circumstances through the indemnification provided to us by Sandoz. However, should our obligation under an indemnification provision fall outside the scope of our insurance coverage, exceed applicable insurance coverage or if we were denied insurance coverage, our business, financial position and results of operations could be materially adversely affected and the market value of our common stock could decline. Similarly, if we are relying on a collaborator to indemnify us and the collaborator is denied insurance coverage or the indemnification obligation exceeds the applicable insurance coverage, and if the collaborator does not have other assets available to indemnify us, our business, financial position and results of operations could be materially adversely affected.

Risks Relating to Patents and Licenses

If we are not able to obtain and enforce patent protection for our discoveries, our ability to successfully commercialize our product candidates will be harmed and we may not be able to operate our business profitably.

Our success depends, in part, on our ability to protect proprietary methods and technologies that we develop under the patent and other intellectual property laws of the United States and other countries, so that we can prevent others from using our inventions and proprietary information. However, we may not hold proprietary rights to some patents related to our current or future product candidates. Because patent applications in the United States and many foreign jurisdictions are typically not published until 18 months after filing, or in some cases not at all, and because publications of discoveries in scientific literature lag behind actual discoveries, we cannot be certain that we were the first to make the inventions claimed in issued patents or pending patent applications, or that we were the first to file for protection of the inventions set forth in our patent applications. As a result, we may be required to obtain licenses under third-party patents to market our proposed products. If licenses are not available to us on acceptable terms, or at all, we will not be able to market the affected products.

Our strategy depends on our ability to rapidly identify and seek patent protection for our discoveries. This process is expensive and time consuming, and we may not be able to file and prosecute all necessary or desirable patent applications at a reasonable cost or in a timely manner. Despite our efforts to protect our proprietary rights, unauthorized parties may be able to obtain and use information that we regard as proprietary. The issuance of a patent does not guarantee that it is valid or enforceable, so even if we obtain patents, they may not be valid or enforceable against third parties. In addition, the issuance of a patent does not guarantee that we have the right to practice the patented invention. Third parties may have blocking patents that could be used to prevent us from marketing our own patented product and practicing our own patented technology.

Our pending patent applications may not result in issued patents. The patent position of pharmaceutical or biotechnology companies, including ours, is generally uncertain and involves complex legal and factual considerations. The standards which the United States Patent and Trademark Office and its foreign counterparts use to grant patents are not always applied predictably or uniformly and can change. There is also no uniform, worldwide policy regarding the subject matter and scope of claims granted or allowable in pharmaceutical or biotechnology patents. The laws of some foreign countries do

41




not protect proprietary information to the same extent as the laws of the United States, and many companies have encountered significant problems and costs in protecting their proprietary information in these foreign countries. Accordingly, we do not know the degree of future protection for our proprietary rights or the breadth of claims allowed in any patents issued to us or to others. The allowance of broader claims may increase the incidence and cost of patent interference proceedings and/or opposition proceedings, and the risk of infringement litigation. On the other hand, the allowance of narrower claims may limit the value of our proprietary rights. Our issued patents may not contain claims sufficiently broad to protect us against third parties with similar technologies or products, or provide us with any competitive advantage. Moreover, once they have issued, our patents and any patent for which we have licensed or may license rights may be challenged, narrowed, invalidated or circumvented. If our patents are invalidated or otherwise limited, other companies will be better able to develop products that compete with ours, which could adversely affect our competitive business position, business prospects and financial condition.

We also rely on trade secrets, know-how and technology, which are not protected by patents, to maintain our competitive position. If any trade secret, know-how or other technology not protected by a patent were to be disclosed to or independently developed by a competitor, our business and financial condition could be materially adversely affected.

Our competitors may allege that we are infringing their intellectual property, forcing us to expend substantial resources in resulting litigation, the outcome of which would be uncertain. Any unfavorable outcome of such litigation could have a material adverse effect on our business, financial position and results of operations.

If any party successfully asserts that we are infringing their intellectual property or that our creation or use of proprietary technology infringes upon their intellectual property rights, we might be forced to incur expenses to litigate the claims and pay damages, potentially including treble damages, if we are found to have willfully infringed such parties’ patent rights. In addition, if we are unsuccessful in litigation, or pending the outcome of litigation, a court could issue a temporary injunction or a permanent injunction preventing us from marketing and selling the patented drug or other technology for the life of the patent that we have allegedly or been deemed to have infringed. Litigation concerning patents, other forms of intellectual property and proprietary technologies is becoming more widespread and can be protracted and expensive, and can distract management and other key personnel from performing their duties for us.

Any legal action against us or our collaborators claiming damages and seeking to enjoin commercial activities relating to the affected products, and processes could, in addition to subjecting us to potential liability for damages, require us or our collaborators to obtain a license in order to continue to manufacture or market the affected products and processes. Any license required under any patent may not be made available on commercially acceptable terms, if at all. In addition, some licenses may be non-exclusive, and therefore, our competitors may have access to the same technology licensed to us. If we fail to obtain a required license or are unable to design around a patent, we may be unable to effectively market some of our technology and products, which could limit our ability to generate revenues or achieve profitability and possibly prevent us from generating revenue sufficient to sustain our operations.

If we become involved in patent litigation or other proceedings to enforce our patent rights, we could incur substantial costs, substantial liability for damages and be required to stop our product commercialization efforts.

We may need to resort to litigation to enforce a patent issued to us or to determine the scope and validity of third-party proprietary rights. The cost to us of any litigation or other proceeding relating to intellectual property rights, even if resolved in our favor, could be substantial, and the litigation could divert our management’s efforts. Some of our competitors may be able to sustain the costs of complex patent litigation more effectively than we can because they have substantially greater resources. Uncertainties resulting from the initiation and continuation of any litigation could limit our ability to continue our operations.

42




We in-license a significant portion of our proprietary technologies and if we fail to comply with our obligations under any of the related agreements, we could lose license rights that are necessary to develop our product candidates.

We are a party to and rely on a number of in-license agreements with third parties, such as those with the Massachusetts Institute of Technology, that give us rights to intellectual property that is necessary for our business. In addition, we expect to enter into additional licenses in the future. Our current in-license arrangements impose various development, royalty and other obligations on us. If we breach these obligations, these exclusive licenses could be converted to non-exclusive licenses or the agreements could be terminated, which would result in our being unable to develop, manufacture and sell products that are covered by the licensed technology.

Confidentiality agreements with employees and others may not adequately prevent disclosure of trade secrets and other proprietary information.

In order to protect our proprietary technology and processes, we also rely in part on confidentiality agreements with our corporate partners, employees, consultants, outside scientific collaborators and sponsored researchers, advisors and others. These agreements may not effectively prevent disclosure of confidential information and may not provide an adequate remedy in the event of unauthorized disclosure of confidential information. In addition, others may independently discover trade secrets and proprietary information, and in such cases we could not assert any trade secret rights against such party. Costly and time consuming litigation could be necessary to enforce and determine the scope of our proprietary rights, and the failure to obtain or maintain trade secret protection could adversely affect our competitive business position.

General Company Related Risks

Our directors, executive officers and major stockholders have substantial control over matters submitted to stockholders for approval that could delay or prevent a change in corporate control.

Our directors, executive officers and principal stockholders, together with their affiliates and related persons, beneficially owned, in the aggregate, approximately 69.1% of our outstanding common stock as of December 31, 2005. As a result, these stockholders, if acting together, may have the ability to determine the outcome of matters submitted to our stockholders for approval, including the election and removal of directors and any merger, consolidation or sale of all or substantially all of our assets. In addition, these persons, acting together, may have the ability to control the management and affairs of our company. Accordingly, this concentration of ownership may harm the market price of our common stock by:

·        delaying, deferring or preventing a change in control of our company;

·        entrenching our management and/or board;

·        impeding a merger, consolidation, takeover or other business combination involving our company; or

·        discouraging a potential acquirer from making a tender offer or otherwise attempting to obtain control of our company.

Anti-takeover provisions in our charter documents and under Delaware law could make an acquisition of us, which may be beneficial to our stockholders, more difficult and may prevent attempts by our stockholders to replace or remove our current management.

Provisions in our certificate of incorporation and our by-laws may delay or prevent an acquisition of us or a change in our management. In addition, these provisions may frustrate or prevent any attempts by our stockholders to replace or remove our current management by making it more difficult for stockholders to

43




replace members of our board of directors. Because our board of directors is responsible for appointing the members of our management team, these provisions could in turn affect any attempt by our stockholders to replace current members of our management team. These provisions include:

·        a classified board of directors;

·        a prohibition on actions by our stockholders by written consent;

·        a “poison pill” in accordance with the Company’s Shareholders Rights Plan that would work to dilute the stock ownership of a potential hostile acquirer, effectively preventing acquisitions that have not been approved by our board of directors; and

·        limitations on the removal of directors.

Moreover, because we are incorporated in Delaware, we are governed by the provisions of Section 203 of the Delaware General Corporation Law, which prohibits a person who owns in excess of 15% of our outstanding voting stock from merging or combining with us for a period of three years after the date of the transaction in which the person acquired in excess of 15% of our outstanding voting stock, unless the merger or combination is approved in a prescribed manner. Finally, these provisions establish advance notice requirements for nominations for election to our board of directors or for proposing matters that can be acted upon at stockholder meetings. These provisions would apply even if the offer may be considered beneficial by some stockholders.

Our stock price may be volatile, and purchasers of our common stock could incur substantial losses.

The stock market in general and the market prices for securities of biotechnology companies in particular have experienced extreme volatility that often have been unrelated or disproportionate to the operating performance of these companies. The trading price of our common stock has been, and is likely to continue to be, volatile. Our stock price could be subject to wide fluctuations in response to a variety of factors, including the following:

·        failure to obtain FDA approval for M-Enoxaparin or other adverse FDA decisions relating to
M-Enoxaparin;

·        litigation involving our company or our general industry or both, including potential litigation with Sanofi-Aventis relating to M-Enoxaparin;

·        results or delays in our or our competitor’s clinical trials or regulatory filings;

·        failure to demonstrate therapeutic equivalence with respect to our technology-enabled generic product candidates and safety and efficacy for our novel development product candidates;

·        our ability to manufacture any products to commercial standards;

·        failure of any of our product candidates, if approved, to achieve commercial success;

·        developments or disputes concerning our patents or other proprietary rights;

·        changes in estimates of our financial results or recommendations by securities analysts;

·        termination of any of our strategic partnerships;

·        significant acquisitions, strategic partnerships, joint ventures or capital commitments by us or our competitors; and

·        investors’ general perception of our company, our products, the economy and general market conditions.

44




If any of these factors causes an adverse effect on our business, results of operations or financial condition, the price of our common stock could fall and investors may not be able to sell their common stock at or above their respective purchase prices.

Item 1B.                Unresolved Staff Comments

Not applicable.

Item 2.                         PROPERTIES

As of March 1, 2006, pursuant to our September 2004 sublease agreement, as amended on September 7, 2005, November 21, 2005 and January 27, 2006, we are leasing a total of approximately 78,000 square feet of office and laboratory space in one building in Cambridge, Massachusetts:

Property Location

 

 

 

Approximate Square
Footage

 

Use

 

Lease Expiration
Date

 

675 West Kendall Street

 

 

78,000

 

 

Laboratory & Office

e

 

04/30/2011

 

 

Cambridge, Massachusetts 02142

 

 

 

 

 

 

 

 

 

 

 

 

Item 3.                         LEGAL PROCEEDINGS

We are not a party to any material legal proceedings.

Item 4.                         SUBMISSION OF MATTERS TO A VOTE OF SECURITY HOLDERS

Not applicable.

45




PART II

Item 5.                         MARKET FOR THE REGISTRANT’S COMMON EQUITY, RELATED STOCKHOLDER MATTERS AND ISSUER PURCHASES OF EQUITY SECURITIES

Market Information

Prior to June 2004, there was no established market for our common stock. Since June 22, 2004, our common stock has been traded on the NASDAQ National Market under the symbol “MNTA.” The following table sets forth the high and low last sale prices of our common stock for the periods indicated, as reported on the NASDAQ National Market:

Quarter ended

 

 

 

High

 

Low

 

June 30, 2004 (beginning June 22, 2004)

 

$

8.85

 

$

7.81

 

September 30, 2004

 

8.70

 

7.05

 

December 31, 2004

 

8.56

 

7.06

 

March 31, 2005

 

8.73

 

6.55

 

June 30, 2005

 

20.45

 

7.60

 

September 30, 2005

 

30.99

 

19.20

 

December 31, 2005

 

29.06

 

18.33

 

 

Holders

On March 1, 2006, the approximate number of holders of record of our common stock was 63 and the approximate number of beneficial holders of our common stock was 462.

Dividends

We have never declared or paid any cash dividends on our common stock. We anticipate that, in the foreseeable future, we will continue to retain any earnings for use in the operation of our business and will not pay any cash dividends.

Use of Proceeds

On June 25, 2004, we sold 5,350,000 shares, together with an additional 802,500 shares pursuant to the exercise by the underwriters of an over-allotment option, of our common stock in connection with the closing of our initial public offering. The Registration Statement on Form S-1 (Reg. No. 333-113522) we filed to register our common stock in our initial public offering was declared effective by the Securities and Exchange Commission on June 21, 2004.

All of the net proceeds of our initial public offering have been invested into investment-grade marketable securities. None of the net proceeds were directly or indirectly paid to (i) any of our directors, officers or their associates, (ii) any person(s) owning 10% or more of any class of our equity securities or (iii) any of our affiliates. There has been no material change in the planned use of proceeds from our initial public offering as described in our final prospectus filed with the Securities Exchange Commission pursuant to Rule 424(b).

Item 6.                         SELECTED FINANCIAL DATA

The selected financial data set forth below with respect to our statement of operations data for the years ended December 31, 2005, 2004 and 2003 and the balance sheet data as of December 31, 2005 and 2004 are derived from our audited financial statements included in this Annual Report on Form 10-K. The statement of operations data for the year ended December 31, 2002 and the period from inception through December 31, 2001 and the balance sheet data as of December 31, 2003, 2002 and 2001 are derived from our audited financial statements which are not included herein. Historical results are not necessarily indicative of future results. See the notes to the consolidated financial statements for an explanation of the

46




method used to determine the number of shares used in computing basic and diluted net loss per common share. The selected financial data set forth below should be read in conjunction with and is qualified in its entirety by our audited consolidated financial statements and related notes thereto found at “Item 8. “Financial Statements and Supplementary Data” and “Item 7. Management’s Discussion and Analysis of Financial Condition and Results of Operations” which are included elsewhere in this Annual Report on Form 10-K.

Momenta Pharmaceuticals, Inc.
Selected Financial Data

 

 

Year Ended December 31,

 

Period from
Inception
(May 17,
2001)
through

 

 

 

2005

 

2004

 

2003

 

2002

 

December 31,
2001

 

 

 

(In thousands, except per share information)

 

Statements of Operations Data:

 

 

 

 

 

 

 

 

 

 

 

 

 

Collaboration revenue

 

$

14,479

 

$

7,832

 

$

1,454

 

$

 

 

$

 

 

Operating expenses:

 

 

 

 

 

 

 

 

 

 

 

 

 

Research and development

 

25,178

 

15,722

 

5,347

 

2,174

 

 

206

 

 

General and administrative

 

14,059

 

6,751

 

4,083

 

2,712

 

 

167

 

 

Total operating expenses

 

39,237

 

22,473

 

9,430

 

4,886

 

 

373

 

 

Loss from operations

 

(24,758

)

(14,641

)

(7,976

)

(4,886

)

 

(373

)

 

Interest income

 

3,353

 

605

 

74

 

17

 

 

2

 

 

Interest expense

 

(257

)

(39

)

(43

)

 

 

 

 

Net loss

 

(21,662

)

(14,075

)

(7,945

)

(4,869

)

 

(371

)

 

Deemed dividend related to beneficial conversion feature of Series C redeemable convertible preferred stock

 

 

(20,389

)

 

 

 

 

 

Dividends and accretion to redemption value of redeemable convertible preferred stock

 

 

(1,852

)

(1,898

)

(520

)

 

(22

)

 

Net loss attributable to common stockholders

 

$

(21,662

)

$

(36,316

)

$

(9,843

)

$

(5,389

)

 

$

(393

)

 

Basic and diluted net loss per share attributable to common stockholders

 

$

(0.79

)

$

(2.56

)

$

(5.02

)

$

(5.70

)

 

$

(6.74

)

 

Shares used in computing basic and diluted net loss per share attributable to common stockholders

 

27,283

 

14,177

 

1,961

 

946

 

 

58

 

 

 

47




 

 

 

As of December 31,

 

 

 

2005

 

2004

 

2003

 

2002

 

2001

 

 

 

(In thousands)

 

Balance Sheet Data:

 

 

 

 

 

 

 

 

 

 

 

Cash and cash equivalents

 

$

25,890

 

$

11,678

 

$

4,613

 

$

1,471

 

$

181

 

Marketable securities

 

130,364

 

41,943

 

7,994

 

 

 

Working capital

 

155,661

 

54,154

 

13,044

 

633

 

(128

)

Total assets

 

171,101

 

64,330

 

16,084

 

2,500

 

184

 

Line of credit obligations—net of current portion

 

1,621

 

1,105

 

372

 

 

 

Capital lease obligations—net of current portion

 

1,375

 

 

 

 

 

Redeemable convertible preferred stock

 

 

 

27,225

 

6,427

 

22

 

Accumulated deficit

 

(73,606

)

(51,944

)

(15,628

)

(5,785

)

(396

)

Total stockholders’ equity (deficit)

 

$

160,155

 

$

56,993

 

$

(13,779

)

$

(4,831

)

$

(148

)

 

48




Item 7.                         MANAGEMENT’S DISCUSSION AND ANALYSIS OF FINANCIAL CONDITION AND RESULTS OF OPERATIONS

Our management’s discussion and analysis of our financial condition and results of operations include the identification of certain trends and other statements that may predict or anticipate future business or financial results that are subject to important factors that could cause our actual results to differ materially from those indicated. See “Risk Factors.”

Overview

We are a biotechnology company specializing in the sequencing, or detailed structural analysis, and design of complex sugars for the development of improved versions of existing drugs, the development of novel drugs and the discovery of new biological processes. We are also utilizing our ability to sequence sugars to create technology-enabled generic versions of sugar-based and complex drug products. Through detailed analysis of the molecular structure of complex sugars, we believe our proprietary technology enables us to define the specific sugar sequences contained in complex sugar-based drugs, including those structures that had previously not been described due to a lack of available technology. In addition, we are able to derive a more complete understanding of the roles that sugars play in cellular function, disease and drug action based on our analytical capabilities. With our capabilities, we have developed a diversified pipeline of near-term product opportunities and novel discovery and development candidates.

Our business strategy is to utilize revenue realized from applying our technology to near-term product opportunities, such as M-Enoxaparin and generic versions of other complex mixtures, as a funding source for our development and discovery programs. Over the long term, we expect to generate value by leveraging our understanding of sugars to create novel therapeutics which address critical unmet medical needs in a wide range of disease areas, including oncology, cardiovascular disease, inflammation and immunology.

Our most advanced product candidate, M-Enoxaparin, is designed to be a technology-enabled generic version of Lovenox®, a widely prescribed low molecular weight heparin, or LMWH. We have formed a collaboration with Sandoz N.V. and Sandoz Inc., collectively Sandoz, affiliates of Novartis AG, to jointly develop, manufacture and commercialize M-Enoxaparin. In accordance with our collaboration with Sandoz, an Abbreviated New Drug Application, or ANDA, was submitted for M-Enoxaparin on August 29, 2005.

Since our inception in 2001, we have incurred annual net losses. As of December 31, 2005, we had an accumulated deficit of $73.6   million. We recognized net losses of $21.7 million, $14.1 million and $7.9 million for the years ended December 31, 2005, 2004 and 2003 respectively. We expect to incur substantial and increasing losses as we develop our product candidates, expand our research and development activities and prepare for the commercial launch of our product candidates. Additionally, we plan to continue to evaluate possible acquisitions or licensing of rights to additional technologies, products or assets that fit within our growth strategy. Accordingly, we will need to generate significant revenues to achieve and then maintain profitability.

Since our inception, we have had no revenues from product sales. Our revenues for the years ended December 31, 2005, 2004 and 2003 of $14.5 million, $7.8 million and $1.5 million, respectively, were derived from our collaboration agreement with Sandoz and primarily consist of amounts earned by us for reimbursement by Sandoz of research and development services and development costs for M-Enoxaparin. On June 25, 2004, we completed an initial public offering of our common stock, the net proceeds of which were $35.3 million after deducting underwriters’ discounts and expenses. In July 2005 we raised $122.3 million in a follow-on public offering, net of expenses, from the sale and issuance of 4,827,300 shares of our common stock. We have devoted substantially all of our capital resources to the research and development of our product candidates.

49




The biotechnology and pharmaceutical industries in which we compete are undergoing, and are expected to continue to undergo, rapid and significant technological change. We expect competition to intensify as technological advances are made or new biotechnology products are introduced. To become and remain profitable, we must succeed in developing and commercializing drugs with significant market potential. This will require us to be successful in a range of challenging activities for which we are only in the preliminary stages: developing drugs; obtaining regulatory approval for them; and manufacturing, marketing and selling them. We have invested a significant portion of our time, financial resources and collaboration efforts in the development of our most advanced product candidate, M-Enoxaparin. Our successful development and commercialization of M-Enoxaparin, in collaboration with Sandoz, depends on several factors, including: using our technology to demonstrate successfully to the FDA that
M-Enoxaparin is therapeutically equivalent to Lovenox; meeting any other FDA requirements for marketing approval;  successfully manufacturing M-Enoxaparin in a consistent and reproducible manner and at a commercial scale; manufacturing M-Enoxaparin cost-effectively; achieving a favorable outcome of potential litigation with Sanofi-Aventis relating to enoxaparin, if any; and achieving market acceptance of M-Enoxaparin in the medical community and with third-party payors.

Financial Operations Overview

Revenue

We have not yet generated any revenue from product sales and are uncertain whether or not we will generate any revenue from the sale of products over the next several years. We have recognized, in the aggregate, $23.8 million of revenue from our inception through December 31, 2005. This revenue was derived entirely from our collaboration agreement with Sandoz. We will seek to generate revenue from a combination of research and development payments, profit sharing payments, milestone payments and royalties in connection with our Sandoz collaboration and similar future collaborative or strategic relationships. We expect that any revenue we generate will fluctuate from quarter to quarter as a result of the timing and amount of research and development and other payments received under our collaborative or strategic relationships, and the amount and timing of payments we receive upon the sale of our products, to the extent any are successfully commercialized.

Research and Development

Research and development expenses consist of costs incurred in identifying, developing and testing product candidates. These expenses consist primarily of salaries and related expenses for personnel, license fees, consulting fees, contract research and manufacturing, and the costs of laboratory equipment and facilities. We expense research and development costs as incurred.

The following summarizes our primary research and development programs:

Development Programs:

M-Enoxaparin

Our most advanced product candidate, M-Enoxaparin, is designed to be a generic version of Lovenox. Lovenox is a widely-prescribed LMWH used for the prevention and treatment of DVT, and treatment of ACS. We have formed a collaboration with Sandoz to jointly develop, manufacture and commercialize
M-Enoxaparin. Under our collaboration agreement, Sandoz is responsible for funding substantially all of the M-Enoxaparin development, regulatory, legal and commercialization costs. The total cost of development and commercialization and the timing of bringing M-Enoxaparin to market is subject to uncertainties relating to the development, regulatory approval and legal processes. In accordance with our collaboration agreement with Sandoz, an ANDA was submitted to the FDA for M-Enoxaparin on August 29, 2005, seeking approval to market M-Enoxaparin in the United States.

50




We anticipate that the FDA’s review of the M-Enoxaparin ANDA will require, among other things, a review of our technology and characterization methodology, as well as our manufacturing data. In parallel, Momenta, in collaboration with Sandoz, is focused on activities related to supporting the ANDA submission and the FDA’s review of the ANDA and preparing for the commercialization of M-Enoxaparin, if and when approved, including advancing manufacturing, supply chain, sales and marketing objectives.

M118

M118 is a LMWH that we rationally designed to provide improved clinical properties to treat patients with ACS. In November 2004, we initiated efforts to develop a more efficient and reproducible manufacturing process. Those efforts have resulted in a new process with greater yield and reproducibility at a reduced cost, as compared to the prior manufacturing process. In September 2005, we initiated GLP toxicology and pharmacology studies for M118 intended to support our IND. We expect that additional expenditures will be required to complete preclinical testing. If such preclinical testing is successful, we intend to file an IND in mid-2006 and begin Phase I clinical trials shortly thereafter, if the IND goes into effect. Because M118 is in preclinical development, we are not currently able to estimate the cost to complete the research and development phase nor are we able to estimate the timing of commercialization of M118.

Other Complex Mixture Drugs

We are exploring the application of our technology to the analysis of other complex mixture drugs beyond heparins. Certain drug products exist as complex mixtures. In addition to heparins, complex mixtures include synthetic, semi-synthetic and naturally derived products and are composed of molecules that, due to their diversity, are difficult to fully characterize. Drugs which are complex mixtures can be approved and regulated under either the New Drug Application, or NDA, or Biological Licensing Application, or BLA, regulatory paths at the FDA. Some complex mixture products, such as estrogen products, peptide mixtures, and botanical drug products, have been approved as NDAs. However, many other complex mixture products have been approved as BLA products, including glycoproteins such as erythropoietin, blood clotting factors, and interferon beta. We are seeking to apply our technology to complex mixture products irrespective of the regulatory path under which each product was approved.

For complex mixtures approved as NDAs, we are applying our characterization technology to develop technology-enabled generic products. We have identified a candidate for this strategy and are currently refining the characterization data and process development work. We continue to advance our discussions for this complex mixture product with potential strategic partners.

For complex mixtures approved as BLAs, such as glycoproteins, we are applying our technology to characterize and better understand these molecules. Product applications include working with innovator biotechnology companies to help them better understand the sugars contained in their products; applying our technology to create technology-enabled follow on generic glycoproteins, leveraging strategies similar to those of M-Enoxaparin; and creating improved versions of glycoprotein products.

M-Dalteparin

M-Dalteparin is targeted to be a technology-enabled generic version of Fragmin ® , a LMWH product. Fragmin is indicated for the prevention of DVT and selected indications in ACS. In September 2005, Eisai Inc., a U.S. pharmaceutical subsidiary of Eisai Co. Ltd., obtained U.S. promotion rights to Fragmin from Pfizer Inc. Fragmin is marketed by Pfizer in Europe and by Kissei Pharmaceutical Co, Ltd. in Japan.  Similar to Lovenox, Fragmin is currently described by limited measures such as molecular weight distribution, anti-Xa activity and anti-IIa activity. We believe that additional analysis is necessary to demonstrate that a generic version of Fragmin has the same active ingredients as the branded drug. Through our technology, we believe we have the ability to analyze Fragmin and demonstrate that our

51




generic product has the same active ingredients as Fragmin, thereby enabling the FDA to approve an ANDA for Dalteparin.

In November 2005, we reprioritized the M-Dalteparin program in light of other more commercially attractive opportunities.  We have reduced our internal resources for M-Dalteparin while we assess our options to pursue commercialization and partnering of the product.  The total cost of development and commercialization and the timing of bringing M-Dalteparin to market are subject to uncertainties relating to the market growth for Fragmin, as well as the development, regulatory and legal approval processes.

Discovery Programs:

We are also applying our analytical capabilities for complex sugars to several discovery programs, including a drug delivery program and an oncology program. Through our drug delivery program, we have identified a mechanism by which sugars facilitate the transport of drugs across mucosal membranes, enabling the delivery of larger proteins and leading to higher levels of bioavailability, or levels of drug in the blood. We believe this sugar-mediated transport mechanism can be applied to a variety of marketed drugs and drug candidates. While our current focus is on the pulmonary delivery of therapeutic proteins where achieving adequate bioavailability has been a challenge, the technology has potentially broad application to the delivery of other drugs across other mucosal membranes.

A second discovery program is focused on the role that complex sugars play in biological systems, including regulating the development and progression of disease. Our initial focus is in cancer, which is a disease characterized by unregulated cell growth. Sugars play a part in the conversion of normal cells into cancerous cells, the regulation of tumor growth, and tumor invasion and metastasis. We believe that our technology can provide us with a better understanding of the role of sugars in disease, which we hope will enable us to discover novel sugar therapeutics, as well as to discover new disease mechanisms that can be targeted with small molecule or antibody drugs.

General and Administrative

General and administrative expenses consist primarily of salaries and other related costs for personnel in executive, finance, legal, accounting, investor relations, business development and human resource functions. Other costs include facility and insurance costs not otherwise included in research and development expenses and professional fees for legal and accounting services.

We anticipate additional increases in general and administrative expenses to support our research and development programs. These increases will likely include the hiring of additional personnel. We intend to continue to incur increased internal and external legal and business development costs to support our various product development efforts, which can vary from period to period.

52




Results of Operations

Years Ended December 31, 2005, 2004 and 2003

Revenue

Revenue for 2005 was $14.5 million, compared with $7.8 million for 2004, and $1.5 million for 2003. The increase of $6.7 million from 2004 to 2005 and $6.3 million from 2003 to 2004 is attributable to our collaboration agreement with Sandoz signed in November 2003. These revenues include amortization of an initial payment made to us by Sandoz and amounts earned for research and development services and other reimbursable costs. The increases are due to increased research activity as described below.

Research and Development

Research and development expense for 2005 was $25.2 million, compared with $15.7 million in 2004 and $5.3 million in 2003. The increase of $9.5 million from 2004 to 2005 principally resulted from an increase of $2.8 million in personnel and related costs, $2.1 million in manufacturing and research provided by third parties, $1.6 million in facilities costs, $1.3 million in lab supplies, $0.8 million in consultant costs, $0.6 million in depreciation expense and $0.2 million in recruiting and relocation costs. The increase of $10.4 million from 2003 to 2004 principally resulted from an increase of $4.1 million in manufacturing and research provided by third parties and $3.8 million in personnel and related costs.

The following table summarizes the primary components of our research and development expenses for our principal research and development programs for the years ended December 31, 2005, 2004, and 2003.

Research and Development (in thousands)

 

 

 

2005

 

2004

 

2003

 

Development programs

 

$

18,074

 

$

12,391

 

$

4,469

 

Discovery programs

 

3,472

 

2,309

 

496

 

Other research

 

3,632

 

1,022

 

381

 

Total research and development expense

 

$

25,178

 

$

15,722

 

$

5,346

 

 

The increases in development program expenses from 2004 to 2005 and from 2003 to 2004 were primarily due to the increased personnel and manufacturing costs of the M-Enoxaparin program. The increase from 2003 to 2004 also included increased personnel and manufacturing expenses for the M118 program. The increases in discovery program expenses from 2004 to 2005 and from 2003 to 2004 were primarily due to increases in personnel and related costs in drug delivery and oncology. The increase in other research in both periods was primarily due to increases in personnel and related costs for research benefiting our technology platform or multiple programs.  We expect research and development expenses to continue to increase in 2006 for development, discovery and other research programs.

General and Administrative

General and administrative expense for the year ended December 31, 2005 was $14.1 million compared to $6.8 million in 2004 and $4.1 million in 2003. General and administrative expense increased by $7.3 million from 2004 to 2005 due primarily to an increase of $4.1 million in professional fees, including legal, consulting, accounting  and other professional fees, $2.3 million in personnel and related costs, $0.7 million in insurance and $0.2 million in office and computer supplies. In 2004 compared to 2003 general and administrative expense increased by $2.7 million due primarily to an increase of $0.7 million in personnel costs, $0.7 million in professional fees, including consulting and accounting fees, $0.5 million in stock compensation expense, $0.4 million in insurance costs and $0.3 million in facilities costs.

53




Interest Income

Interest income was $3.4 million, $0.6 million and $74,000 for the years ended December 31, 2005, 2004 and 2003, respectively. The increase of $2.8 million from 2004 to 2005 was primarily due to higher average investment balances as a result of our follow-on public offering in July 2005. The increase of $0.5 million from 2003 to 2004 was primarily due to higher average investment balances as a result of the proceeds from our initial public offering in June 2004.

Interest Expense

Interest expense was $257,000, $39,000 and $43,000 for the years ended December 31, 2005, 2004 and 2003, respectively. The increase in 2005 is primarily due to additional amounts drawn from our equipment line of credit during 2005.

Liquidity and Capital Resources

We have financed our operations since inception primarily through the sale of equity securities, payments from our collaboration agreement with Sandoz, borrowings from our lines of credit, and a capital lease obligation. Since our inception, we have received net proceeds of $45.4 million from the issuance of redeemable convertible preferred stock. In June 2004, we completed our initial public offering and raised net proceeds of $35.3 million. In July 2005, we completed a follow-on public offering and raised net proceeds of $122.3 million. As of December 31, 2005, we have received $19.7 million from our Sandoz collaboration, $4.0 million from debt financing, $1.2 million from capital lease obligations and additional funds from interest income.

At December 31, 2005, we had $156.3 million in cash, cash equivalents and marketable securities. In addition, we hold $1.8 million in restricted cash which serves as collateral for a letter of credit related to our facility lease. During the years ended December 31, 2005, 2004 and 2003, our operating activities used $17.0 million, $12.6 million and $8.0 million, respectively. The use of cash in each period was primarily a result of net losses associated with our research and development activities and amounts incurred to develop and maintain our administrative infrastructure.

Net cash used in investing activities was $93.3 million, $37.2 million and $8.5 million for the years ended December 31, 2005, 2004 and 2003, respectively. During 2005, we used $151.6 million of cash to purchase marketable securities, offset by cash provided of $62.0 million in maturities of marketable securities. During 2004, we used $64.9 million of cash to purchase marketable securities, offset by cash provided of $29.8 million in maturities of marketable securities. We used $8.0 million of cash in 2003 to purchase marketable securities. During the years ended December 31, 2005, 2004 and 2003, we used $3.7 million, $2.1 million and $0.5 million respectively, to purchase equipment and leasehold improvements.

For the year ended December 31, 2005, our financing activities provided $124.5 million, reflecting the net proceeds of $122.3 million from our follow-on public offering in July 2005. In addition, we borrowed an additional $1.6 million under our line of credit facility set up in 2004 and we received $1.2 million under a sale leaseback arrangement being treated as a capital lease in December 2005.  The arrangement allows for the sale and leaseback of an additional $1.4 million in capital equipment through December 2006. For the year ended December 31, 2004, our financing activities provided $56.9 million, reflecting the net proceeds of $35.3 million from our initial public offering in June, 2004 and the issuance of our Series C redeemable convertible preferred stock for net proceeds of $20.4 million. In addition, in December 2004, our initial line of credit with a bank provided $1.4 million in proceeds. Payments on our line of credit totaled $0.3 million in 2004. In 2003, $19.7 million was provided by financing activities, primarily due to net proceeds of $18.9 million from our Series B redeemable convertible preferred stock and proceeds from a line of credit of $1.0 million, offset by line of credit payments of $0.3 million.

54




The following table summarizes our contractual obligations and commercial commitments at December 31, 2005:

 

 

 

 

Payments Due by Period

 

Contractual Obligations (in thousands)

 

 

 

Total

 

2006

 

2007
through
2009

 

2010
through
2011

 

After
2011

 

License maintenance obligations

 

$

991

 

$

113

 

$

443

 

 

$

435

 

 

 

*

 

 

Short and long-term line of credit obligation

 

2,466

 

845

 

1,621

 

 

 

 

 

$

 

 

Capital lease obligations

 

1,659

 

284

 

1,375

 

 

 

 

 

 

 

Operating lease obligations

 

18,585

 

3,170

 

10,674

 

 

4,741

 

 

 

 

 

Total contractual cash obligations

 

$

23,701

 

$

4,412

 

$

14,113

 

 

$

5,176

 

 

 

$

 

 


*                     After 2011, the annual obligations, which extend indefinitely, are approximately $0.2 million per year.

We anticipate that our current cash, cash equivalents and short-term investments will be sufficient to fund our operations through at least 2007. However, our forecast of the period of time through which our financial resources will be adequate to support our operations is a forward-looking statement that involves risks and uncertainties, and actual results could vary materially.

Funding Requirements

During 2004 and 2005, we have cumulatively received $19.7 million from our collaboration with Sandoz. Under our collaboration with Sandoz, Sandoz has agreed to fund a minimum amount of personnel and substantially all of the other ongoing development, commercialization and legal expenses incurred with respect to our M-Enoxaparin program, subject to the right to terminate if certain costs exceed mutually agreed upon limits.

We expect to use our current cash, cash equivalents and marketable securities to continue the development of our product candidates, our discovery research programs and for other general corporate purposes. We intend to use the majority of our cash to fund: our development programs, including
M-Enoxaparin, M118, M-Dalteparin and the application of our technology to other complex mixtures including glycoproteins, and non-sugar based complex mixtures. Also we will use funds to advance our discovery programs, which are focused on identifying novel therapeutics and technologies; the potential acquisition of companies, products and technologies that complement our business; and working capital, capital expenditures and other general corporate purposes.

We expect to incur substantial costs and losses as we continue to expand our research and development activities. Our funding requirements will depend on numerous factors, including:

·        the advancement of our generic product candidates and other development programs;

·        the timing, receipt and amount of milestone and other payments, if any, from present and future collaborators;

·        the time and costs involved in obtaining regulatory approvals;

·        the continued progress in our research and development programs, including completion of our preclinical studies and clinical trials;

·        the costs involved in preparing, filing, prosecuting, maintaining and enforcing patent claims;

·        the potential acquisition and in-licensing of other technologies, products or assets;

·        the timing, receipt and amount of sales and royalties, if any, from our product candidates;

·        the cost of manufacturing, marketing and sales activities, if any; and

55




·        the cost of litigation, including potential patent litigation.

We do not expect to generate significant additional revenues, other than payments that we receive from our collaboration with Sandoz or other similar future collaborations, until we successfully obtain marketing approval for, and begin selling, M-Enoxaparin. We believe the key factors that will affect our internal and external sources of cash are:

·        our ability to successfully develop, manufacture, obtain regulatory approval for and commercialize M-Enoxaparin;

·        the success of our development programs, including our generic product candidates and programs involving preclinical and clinical development;

·        the receptivity of the capital markets to financings by biotechnology companies; and

·        our ability to enter into additional strategic collaborations with corporate and academic collaborators and the success of such collaborations.

If our existing resources, including the proceeds of our initial public offering and July 2005 follow-on offering are insufficient to satisfy our liquidity requirements or if we acquire or license additional technologies, products or assets that fit within our growth strategy, we may need to raise additional external funds through the sale of equity or debt securities. The sale of equity securities may result in dilution to our stockholders. Additional financing may not be available in amounts or on terms acceptable to us or at all. If we are unable to obtain additional financing, we may be required to reduce the scope of, delay or eliminate some or all of our planned research, development and commercialization activities, which could harm our financial condition and operating results.

Critical Accounting Policies and Estimates

Our discussion and analysis of our financial condition and results of operations are based on our financial statements, which have been prepared in accordance with accounting principles generally accepted in the United States. The preparation of these financial statements requires us to make estimates and judgments that affect the reported amounts of assets and liabilities and the disclosure of contingent  assets and liabilities at the date of the financial statements and the reported amounts of revenues and expenses during the reporting periods. On an on-going basis, we evaluate our estimates and judgments, including those related to revenue, accrued expenses and certain equity instruments. Prior to our IPO, we also evaluated our estimates and judgments regarding the fair valuation assigned to our common stock. We base our estimates on historical experience, known trends and events and various other factors that are believed to be reasonable under the circumstances, the results of which form the basis for making judgments about the carrying values of assets and liabilities that are not readily apparent from other sources. Actual results may differ from these estimates under different assumptions or conditions.

We believe the following critical accounting policies affect our more significant judgments and estimates used in the preparation of our financial statements.

Revenue

We record revenue on an accrual basis as it is earned and when amounts are considered collectible. Revenues received in advance of performance obligations or in cases where we have a continuing obligation to perform services are deferred and recognized over the performance period. Revenues from milestone payments that represent the culmination of a separate earnings process are recorded when the milestone is achieved. Contract revenues are recorded as the services are performed. When we are required to defer revenue, the period over which such revenue should be recognized is subject to estimates by management and may change over the course of the collaborative agreement.

56




Accrued Expenses

As part of the process of preparing financial statements, we are required to estimate accrued expenses. This process involves identifying services which have been performed on our behalf, and estimating the level of service performed and the associated cost incurred for such service as of each balance sheet date in our financial statements. Examples of estimated expenses for which we accrue include contract service fees paid to contract manufacturers in conjunction with the production of clinical drug supplies and to contract research organizations. In connection with such service fees, our estimates are most affected by our understanding of the status and timing of services provided relative to the actual levels of services incurred by such service providers. The majority of our service providers invoice us monthly in arrears for services performed. In the event that we do not identify certain costs, which have begun to be incurred, or we under- or over-estimate the level of services performed or the costs of such services, our reported expenses for such period would be too low or too high. The date on which certain services commence, the level of services performed on or before a given date and the cost of such services are often determined based on subjective judgments. We make these judgments based upon the facts and circumstances known to us in accordance with generally accepted accounting principles.

Stock-Based Compensation

We have elected to follow Accounting Principles Board Opinion No. 25, Accounting for Stock Issued to Employees , or APB 25, and related interpretations, in accounting for our stock-based compensation plans, rather than the alternative fair value method provided for under Statement of Financial Accounting Standard No. 123, or SFAS 123, Accounting for Stock-Based Compensation . In 2005, 2004 and 2003, certain grants of stock options were made at exercise prices deemed to be less than the fair value of our common stock and, as a result, we recorded deferred stock compensation expense. In the notes to our financial statements, we provide pro forma disclosures in accordance with SFAS 123. We account for transactions in which services are received from non-employees in exchange for equity instruments based on the fair value of such services received or of the equity instruments issued, whichever is more reliably measured, in accordance with SFAS 123 and the Emerging Issues Task Force, or EITF, Issue 96-18, Accounting for Equity Instruments that Are Issued to Other than Employees for Acquiring, or in Conjunction with Selling, Goods or Services , or EITF 96-18.

Accounting for equity instruments granted or sold by us under APB 25, SFAS 123 and EITF 96-18 requires fair value estimates of the equity instrument granted or sold. If our estimates of the fair value of these equity instruments are too high or too low, our expenses may be over or under stated. Equity instruments granted or sold in exchange for the receipt of goods or services and the value of those goods or services cannot be readily estimated, as is true in connection with most stock options and warrants granted to employees and non-employees. We estimated the fair value of the equity instruments based upon consideration of factors which we deemed to be relevant at the time. Because shares of our common stock had not been publicly traded prior to our IPO, market factors historically considered in valuing stock and stock option grants included comparative values of public companies discounted for the risk and limited liquidity provided for in the shares we were issuing, pricing of private sales of our redeemable convertible preferred stock, prior valuations of stock grants and the effect of events that had occurred between the time of such grants, economic trends, and the comparative rights and preferences of the security granted compared to the rights and preferences of our other outstanding equity.

Prior to our IPO, the fair value of our common stock was determined by our board of directors. In the absence of a public trading market for our common stock, our board of directors considered objective and subjective factors in determining the fair value of our common stock. At the time of option grants and other stock issuances, our board of directors considered the liquidation preferences, dividend rights and voting control attributable to our then-outstanding redeemable convertible preferred stock and, primarily, the likelihood of achieving a liquidity event such as an initial public offering or sale of Momenta.

57




Recently Issued Accounting Pronouncements

On December 16, 2004, the Financial Accounting Standards Board (“FASB”) issued FASB Statement No. 123 (revised 2004), Share-Based Payment, which is a revision of FASB Statement No. 123, Accounting for Stock-Based Compensation . Statement 123(R) supersedes APB Opinion No. 25, Accounting for Stock Issued to Employees , and amends FASB Statement No. 95, Statement of Cash Flows . Generally, the approach in Statement 123(R) is similar to the approach described in Statement 123. However, Statement 123(R) requires all share-based payments to employees, including grants of employee stock options, to be expensed based on their fair values. Pro forma disclosure is no longer an alternative. Statement 123(R) must be adopted no later than the beginning of the first fiscal year beginning after June 15, 2005, irrespective of the entity’s fiscal year. Early adoption will be permitted in periods in which financial statements have not yet been issued. We adopted Statement 123(R) on January 1, 2006.

Statement 123(R) permits public companies to adopt its requirements using one of two methods: (i) the “modified prospective method” in which compensation cost is recognized beginning with the effective date (a) based on the requirements of Statement 123(R) for all share-based payments granted after the effective date and (b) based on the requirements of Statement 123 for all awards granted to employees prior to the effective date of Statement 123(R) that remain unvested on the effective date or (ii) a “modified retrospective method”, which includes the requirements of the modified prospective method described above, but also permits entities to restate based on the amounts previously recognized under Statement 123 for purposes of pro forma disclosures either (a) all prior periods presented or (b) prior interim periods of the year of adoption. The Company has adopted the “modified prospective method” when applying Statement 123(R).

As permitted by Statement 123, the Company currently accounts for share-based payments to employees using APB 25’s intrinsic value method and, as such, generally recognizes no compensation cost for employee stock options granted at fair value. Accordingly, the adoption of the Statement 123(R) fair value method will have a significant impact on our result of operations, although it will have no impact on our overall financial position. Had the Company adopted Statement 123(R) in prior periods, the impact of that standard would have approximated the impact of Statement 123 as described in the disclosure of pro forma net loss per share as noted in footnote 2 to our consolidated financial statements. The Company currently expects stock option expense for 2006 to be in a range of $5 million to $6 million dependent upon assumptions used in estimating the fair value, market prices and levels of share-based payments granted in 2006. Any changes from current assumptions could result in significant variation from the Company’s current estimate.

58




Item 7A.                 QUANTITATIVE AND QUALITATIVE DISCLOSURES ABOUT MARKET RISK

We are exposed to market risk related to changes in interest rates. Our current investment policy is to maintain an investment portfolio consisting mainly of U.S. money market and high-grade corporate securities, directly or through managed funds, with maturities of twenty-four months or less. Our cash is deposited in and invested through highly rated financial institutions in North America. Our marketable securities are subject to interest rate risk and will fall in value if market interest rates increase. However, due to the conservative nature of our investments and relatively short effective maturities of debt instruments, interest rate risk is mitigated. If market interest rates were to increase immediately and uniformly by 10% from levels at December 31, 2005, we estimate that the fair value of our investment portfolio would decline by an immaterial amount.

Item 8.                         FINANCIAL STATEMENTS AND SUPPLEMENTARY DATA

Momenta Pharmaceuticals, Inc.

Report of Independent Registered Public Accounting Firm

The Board of Directors and Stockholders of Momenta Pharmaceuticals, Inc.

We have audited the accompanying consolidated balance sheets of Momenta Pharmaceuticals, Inc. as of December 31, 2005 and 2004, and the related consolidated statements of operations, redeemable convertible preferred stock, stockholders’ equity (deficit) and comprehensive loss and cash flows for each of the three years in the period ended December 31, 2005. These financial statements are the responsibility of the Company’s management. Our responsibility is to express an opinion on these financial statements based on our audits.

We conducted our audits in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about whether the financial statements are free of material misstatement. An audit includes examining, on a test basis, evidence supporting the amounts and disclosures in the financial statements. An audit also includes assessing the accounting principles used and significant estimates made by management, as well as evaluating the overall financial statement presentation. We believe that our audits provide a reasonable basis for our opinion.

In our opinion, the financial statements referred to above present fairly, in all material respects, the consolidated financial position of Momenta Pharmaceuticals, Inc. at December 31, 2005 and 2004, and the consolidated results of its operations and its cash flows for each of the three years in the period ended December 31, 2005, in conformity with U.S. generally accepted accounting principles.

We also have audited, in accordance with the standards of the Public Company Accounting Oversight Board (United States), the effectiveness of Momenta Pharmaceuticals, Inc.’s internal control over financial reporting as of December 31, 2005, based on criteria established in Internal Control-Integrated Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission and our report dated March 13, 2006 expressed an unqualified opinion thereon.

 

/s/ ERNST & YOUNG LLP

Boston, Massachusetts

 

March 13, 2006

 

 

59




Momenta Pharmaceuticals, Inc.
Consolidated Balance Sheets

 

 

December 31,

 

 

 

2005

 

2004

 

 

 

(In thousands,
except per share amounts)

 

Assets

 

 

 

 

 

Current assets:

 

 

 

 

 

Cash and cash equivalents

 

$

25,890

 

$

11,678

 

Marketable securities

 

130,364

 

41,943

 

Accounts receivable

 

 

2,238

 

Unbilled collaboration revenue

 

4,347

 

2,801

 

Prepaid expenses and other current assets

 

2,799

 

1,456

 

Total current assets

 

163,400

 

60,116

 

Property and equipment, net of accumulated depreciation

 

5,917

 

2,723

 

Restricted cash

 

1,778

 

1,485

 

Other assets

 

6

 

6

 

Total assets

 

$

171,101

 

$

64,330

 

Liabilities and Stockholders’ Equity

 

 

 

 

 

Current liabilities:

 

 

 

 

 

Accounts payable

 

$

3,080

 

$

3,489

 

Accrued expenses

 

3,355

 

1,611

 

Deferred revenue

 

147

 

147

 

Line of credit obligations

 

845

 

715

 

Capital lease obligations

 

284

 

 

Deferred rent

 

28

 

 

Total current liabilities

 

7,739

 

5,962

 

Deferred revenue, net of current portion

 

123

 

270

 

Line of credit obligations, net of current portion

 

1,621

 

1,105

 

Capital lease obligations, net of current portion

 

1,375

 

 

Deferred rent

 

88

 

 

Total liabilities

 

10,946

 

7,337

 

Commitments and contingencies (Note 14)

 

 

 

 

 

Stockholders’ Equity:

 

 

 

 

 

Preferred stock, $0.01 par value; 5,000 shares authorized at December 31, 2005 and 2004, 100 shares of Series A Junior Participating Preferred Stock, $0.01 par value designated and no shares issued and outstanding

 

 

 

Common stock, $0.0001 par value; 100,000 shares authorized at December 31, 2005 and 2004, 30,465 and 25,409 shares issued and outstanding at December 31, 2005 and 2004, respectively

 

3

 

3

 

Additional paid-in capital

 

236,190

 

112,510

 

Deferred compensation

 

(2,193

)

(3,381

)

Due from officer

 

 

(36

)

Accumulated other comprehensive loss

 

(239

)

(159

)

Accumulated deficit

 

(73,606

)

(51,944

)

Total stockholders’ equity

 

160,155

 

56,993

 

Total liabilities and stockholders’ equity

 

$

171,101

 

$

64,330

 

 

The accompanying notes are an integral part of these consolidated financial statements.

60




Momenta Pharmaceuticals, Inc.
Consolidated Statements of Operations

 

 

Year Ended December 31,

 

 

 

2005

 

2004

 

2003

 

 

 

(In thousands,
except per share amounts)

 

Collaboration revenue

 

$

14,479

 

$

7,832

 

$

1,454

 

Operating expenses:

 

 

 

 

 

 

 

Research and development*

 

25,178

 

15,722

 

5,347

 

General and administrative*

 

14,059

 

6,751

 

4,083

 

Total operating expenses

 

39,237

 

22,473

 

9,430

 

Loss from operations

 

(24,758

)

(14,641

)

(7,976

)

Other income (expense):

 

 

 

 

 

 

 

Interest income

 

3,353

 

605

 

74

 

Interest expense

 

(257

)

(39

)

(43

)

Net loss

 

$

(21,662

)

$

(14,075

)

$

(7,945

)

Deemed dividend related to beneficial conversion feature of Series C redeemable convertible preferred stock

 

 

(20,389

)

 

Dividends and accretion to redemption value of redeemable convertible preferred stock

 

 

(1,852

)

(1,898

)

Net loss attributable to common stockholders

 

$

(21,662

)

$

(36,316

)

$

(9,843

)

Basic and diluted net loss per share attributable to common stockholders

 

$

(0.79

)

$

(2.56

)

$

(5.02

)

Shares used in computing basic and diluted net loss per share attributable to common stockholders

 

27,283

 

14,177

 

1,961

 

* Includes stock-based compensation as follows:

 

 

 

 

 

 

 

Research and development

 

$

634

 

$

875

 

$

173

 

General and administrative

 

1,659

 

1,145

 

683

 

Total stock-based compensation

 

$

2,293

 

$

2,020

 

$

856

 

 

The accompanying notes are an integral part of these consolidated financial statements

61




Momenta Pharmaceuticals, Inc.
CONSOLIDATED STATEMENTS OF REDEEMABLE CONVERTIBLE PREFERRED STOCK,
STOCKHOLDERS’ EQUITY (DEFICIT) AND COMPREHENSIVE LOSS
In thousands

 

 

Redeemable
Convertible

 

 

 

 

 

 

 

Accumulated

 

 

 

 

 

 

 

Total

 

 

 

Preferred Stock

 

 

 

Common Stock

 

Additional

 

Other

 

 

 

Deferred

 

 

 

Stockholders’

 

 

 

Shares

 

Amount

 

 

 

Shares

 

Par
Value

 

Paid-In
Capital

 

Comprehensive
Loss

 

Due from
Officer

 

Stock
Compensation

 

Accumulated
Deficit

 

Equity
(Deficit)

 

Balances at December 31, 2002

 

2,677

 

$   6,427

 

 

 

 

4,161

 

 

 

$ —

 

 

 

$   2,810

 

 

 

$   —

 

 

 

$ (107

)

 

 

$ (1,749

)

 

 

$ (5,785

)

 

 

$  (4,831

)

 

Sale of Series B Redeemable Convertible Preferred Stock, net of offering costs of $100

 

6,440

 

18,900

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Issuance of common stock pursuant to the exercise of stock options

 

 

 

 

 

 

23

 

 

 

 

 

 

5

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

5

 

 

Accretion of Preferred Stock to redemption value

 

 

52

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(52

)

 

 

(52

)

 

Preferred Stock dividends

 

 

1,846

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(1,846

)

 

 

(1,846

)

 

Payment of officer obligation

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

36

 

 

 

 

 

 

 

 

 

36

 

 

Deferred stock compensation expense associated with stock options

 

 

 

 

 

 

 

 

 

 

 

 

1,956

 

 

 

 

 

 

 

 

 

(1,956

)

 

 

 

 

 

 

 

Amortization of deferred stock compensation

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

671

 

 

 

 

 

 

671

 

 

Compensation expense associated with options issued to nonemployees

 

 

 

 

 

 

 

 

 

 

 

 

 

184

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

184

 

 

Repurchase of unvested restricted stock

 

 

 

 

 

 

(21

)

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Vesting of restricted stock

 

 

 

 

 

 

 

 

 

 

 

 

5

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

5

 

 

Unrealized loss on marketable securities

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(6

)

 

 

 

 

 

 

 

 

 

 

 

(6

)

 

Net loss

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(7,945

)

 

 

(7,945

)

 

Balances at December 31, 2003

 

9,117

 

$ 27,225

 

 

 

 

4,163

 

 

 

$ —

 

 

 

$   4,960

 

 

 

$    (6

)

 

 

$ (71

)

 

 

$ (3,034

)

 

 

$ (15,628

)

 

 

$ (13,779

)

 

Sale of Series C Redeemable Convertible Preferred Stock, net of offering costs of $110

 

2,613

 

20,390

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Accretion of Preferred Stock to redemption value

 

 

37

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(37

)

 

 

(37

)

 

Preferred Stock dividends

 

 

1,815

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(1,815

)

 

 

(1,815

)

 

Proceeds from redeemable preferred stock allocated to beneficial conversion feature

 

 

 

 

 

 

 

 

 

 

 

 

20,389

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

20,389

 

 

Dividend on redeemable preferred stock attributable to beneficial conversion feature

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(20,389

)

 

 

(20,389

)

 

Conversion of redeemable convertible preferred stock to common stock

 

(11,730

)

(49,467

)

 

 

 

15,014

 

 

 

2

 

 

 

49,465

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

49,467

 

 

Issuance of common stock in Initial Public Offering

 

 

 

 

 

 

6,153

 

 

 

1

 

 

 

35,296

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

35,297

 

 

Issuance of common stock pursuant to the exercise of stock options

 

 

 

 

 

 

67

 

 

 

 

 

 

27

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

27

 

 

Payment of officer obligation

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

35

 

 

 

 

 

 

 

 

 

35

 

 

Deferred stock compensation expense associated with stock options

 

 

 

 

 

 

 

 

 

 

 

 

1,714

 

 

 

 

 

 

 

 

 

(1,714

)

 

 

 

 

 

 

 

Amortization of deferred stock compensation

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

1,367

 

 

 

 

 

 

1,367

 

 

Compensation expense associated with options issued to nonemployees

 

 

 

 

 

 

 

 

 

 

 

 

221

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

221

 

 

Compensation expense associated with accelerated vesting of employee options

 

 

 

 

 

 

 

 

 

 

 

 

432

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

432

 

 

Vesting of restricted stock

 

 

 

 

 

 

 

 

 

 

 

 

6

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

6

 

 

Cashless exercise of warrant

 

 

 

 

 

 

12

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Unrealized loss on marketable securities

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(153

)

 

 

 

 

 

 

 

 

 

 

 

(153

)

 

Net loss

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(14,075

)

 

 

(14,075

)

 

Comprehensive loss

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(14,228

)

 

Balances at December 31, 2004

 

 

$         —

 

 

 

 

25,409

 

 

 

$ 3

 

 

 

$ 112,510

 

 

 

$ (159

)

 

 

$ (36

)

 

 

$ (3,381

)

 

 

$ (51,944

)

 

 

$ 56,993

 

 

 

62

 




Momenta Pharmaceuticals, Inc.
CONSOLIDATED STATEMENTS OF REDEEMABLE CONVERTIBLE PREFERRED STOCK,
STOCKHOLDERS’ EQUITY (DEFICIT) AND COMPREHENSIVE LOSS (Continued)
In thousands

 

 

Redeemable
Convertible

 

 

 

 

 

 

 

Accumulated

 

 

 

 

 

 

 

Total

 

 

 

Preferred Stock

 

 

 

Common Stock

 

Additional

 

Other

 

 

 

Deferred

 

 

 

Stockholders’

 

 

 

Shares

 

Amount

 

 

 

Shares

 

Par
Value

 

Paid-In
Capital

 

Comprehensive
Loss

 

Due from
Officer

 

Stock
Compensation

 

Accumulated
Deficit

 

Equity
(Deficit)

 

Balances at December 31, 2004 (brought forward)

 

 

$         —

 

 

 

 

25,409

 

 

 

$ 3

 

 

 

$ 112,510

 

 

 

$ (159

)

 

 

$ (36

)

 

 

$ (3,381

)

 

 

$ (51,944

)

 

 

$ 56,993

 

 

Issuance of common stock in follow-on public offering

 

 

 

 

 

 

4,827

 

 

 

 

 

 

122,327

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

122,327

 

 

Issuance of common stock pursuant to the exercise of stock options

 

 

 

 

 

 

217

 

 

 

 

 

 

183

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

183

 

 

Issuance of common stock pursuant to employee stock purchase plan

 

 

 

 

 

 

12

 

 

 

 

 

 

65

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

65

 

 

Payment of officer obligation

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

36

 

 

 

 

 

 

 

 

 

36

 

 

Deferred stock compensation expense associated with stock options

 

 

 

 

 

 

 

 

 

 

 

 

213

 

 

 

 

 

 

 

 

 

(213

)

 

 

 

 

 

 

 

Amortization of deferred stock compensation

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

1,401

 

 

 

 

 

 

1,401

 

 

Compensation expense associated with options issued to nonemployees

 

 

 

 

 

 

 

 

 

 

 

 

783

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

783

 

 

Compensation expense associated with the modification of stock option awards

 

 

 

 

 

 

 

 

 

 

 

 

109

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

109

 

 

Unrealized loss on marketable securities

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(80

)

 

 

 

 

 

 

 

 

 

 

 

(80

)

 

Net loss

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(21,662

)

 

 

(21,662

)

 

Comprehensive loss

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

(21,742

)

 

Balances at December 31, 2005

 

 

$         —

 

 

 

 

30,465

 

 

 

$ 3

 

 

 

$ 236,190

 

 

 

$ (239

)

 

 

$   —

 

 

 

$ (2,193

)

 

 

$ (73,606

)

 

 

$ 160,155

 

 

 

The accompanying notes are an integral part of these consolidated financial statements

63

 




Momenta Pharmaceuticals, Inc.
Consolidated Statements of Cash Flows

 

 

Year Ended December 31,

 

 

 

2005

 

2004

 

2003

 

 

 

(In Thousands)

 

Cash Flows from Operating activities:

 

 

 

 

 

 

 

Net loss

 

$

(21,662

)

$

(14,075

)

$

(7,945

)

Adjustments to reconcile net loss to net cash used in operating activities:

 

 

 

 

 

 

 

Depreciation and amortization

 

967

 

526

 

252

 

Stock compensation expense

 

2,293

 

2,020

 

856

 

Deferred rent

 

116

 

 

 

Noncash interest expense

 

10

 

11

 

9

 

Loss on disposal of assets

 

62

 

 

 

Amortization of premium on investments

 

1,050

 

1,015

 

 

Changes in operating assets and liabilities:

 

 

 

 

 

 

 

Accounts receivable

 

2,238

 

(2,238

)

 

Unbilled collaboration revenue

 

(1,546

)

(783

)

(2,018

)

Prepaid expenses and other current assets

 

(1,442

)

(1,194

)

(238

)

Restricted cash

 

(293

)

(1,485

)

 

Other assets

 

 

74

 

29

 

Accounts payable

 

(409

)

2,685

 

516

 

Accrued expenses

 

1,744

 

1,040

 

(33

)

Deferred revenue

 

(147

)

(147

)

564

 

Net cash used in operating activities

 

(17,019

)

(12,551

)

(8,008

)

Cash Flows from Investing activities:

 

 

 

 

 

 

 

Purchases of marketable securities

 

(151,554

)

(64,921

)

(8.002

)

Proceeds from maturities of marketable securities

 

62,003

 

29,804

 

 

Purchase of property and equipment

 

(3,726

)

(2,132

)

(502

)

Net cash used in investing activities

 

(93,277

)

(37,249

)

(8,504

)

Cash Flows from Financing activities:

 

 

 

 

 

 

 

Proceeds from public offering of common, stock, net
of issuance costs

 

122,327

 

35,297

 

 

Proceeds from issuance of redeemable convertible preferred stock, net of issuance costs

 

 

20,389

 

18,900

 

Proceeds from line of credit

 

1,551

 

1,448

 

1,002

 

Proceeds from sale leaseback

 

1,242

 

 

 

Payments on line of credit

 

(896

)

(331

)

(289

)

Repayment of officer obligation

 

36

 

35

 

36

 

Proceeds from issuance of common stock under stock plans

 

248

 

27

 

5

 

Net cash provided by financing activities

 

124,508

 

56,865

 

19,654

 

Increase in cash and cash equivalents

 

14,212

 

7,065

 

3,142

 

Cash and cash equivalents, beginning of period

 

11,678

 

4,613

 

1,471

 

Cash and cash equivalents, end of period

 

$

25,890

 

$

11,678

 

$

4,613

 

Supplemental Cash Flow Information:

 

 

 

 

 

 

 

Cash paid for interest

 

$

163

 

$

28

 

$

34

 

Non Cash Transactions:

 

 

 

 

 

 

 

Acquisition of assets under capital lease

 

$

398

 

$

 

$

 

 

The accompanying notes are an integral part of these consolidated financial statements.

64




Momenta Pharmaceuticals, Inc.

Notes to Consolidated Financial Statements December 31, 2005

1. The Company

Business

Momenta Pharmaceuticals, Inc. (the “Company”) was incorporated in the state of Delaware on May 17, 2001. Its facilities are located in Cambridge, Massachusetts. Momenta is a biotechnology company specializing in the detailed structural analysis and design of complex sugars for the development of technology-enabled generic versions of complex drug products, improved versions of existing drugs, and the discovery of novel drugs and new biological processes.

2. Summary of Significant Accounting Policies

Principles of Consolidation

Our consolidated financial statements include our accounts and the accounts of our wholly-owned subsidiary, Momenta Pharmaceuticals Securities Corporation. All inter-company transactions have been eliminated.

Use of Estimates

The preparation of financial statements in conformity with accounting principles generally accepted in the United States requires management to make estimates and assumptions that affect the amounts reported in the financial statements and accompanying notes. Actual results could differ materially from those estimates.

Cash, Cash Equivalents, and Marketable Securities

The Company invests its excess cash in bank deposits, money market accounts, corporate debt securities, and U.S. government obligations. The Company considers all highly liquid investments purchased with maturities of three months or less from the date of purchase to be cash equivalents. Cash equivalents are carried at fair value, which approximates cost, and primarily consist of money market funds maintained at major U.S. financial institutions.

All marketable securities, which primarily represent marketable debt securities, have been classified as “available-for-sale.” Purchased premiums or discounts on debt securities are amortized to interest income through the stated maturities of the debt securities. Management determines the appropriate classification of its investments in debt securities at the time of purchase and evaluates such designation as of each balance sheet date. Unrealized gains and losses are included in accumulated other comprehensive loss and reported as a separate component of stockholders’ equity. Realized gains and losses and declines in value judged to be other-than-temporary, if any, on available-for-sale securities are included in interest income. The cost of securities sold is based on the specific identification method. Interest earned on short-term investments is included in interest income.

Credit Risks and Concentrations

Financial instruments that potentially subject the Company to a concentration of credit risk consist of cash equivalents and marketable securities. The Company has established guidelines relating to diversification and maturities that allows the Company to manage risk.

65




Fair Value of Financial Instruments

The carrying amounts of the Company’s financial instruments, which include cash equivalents and other accrued expenses, approximate their fair values due to their short maturities. The carrying amount of the Company’s line of credit obligations approximates their fair values due to their variable interest rates.

Accounts Receivable

Accounts receivable represents an amount owed from one collaborative partner at December 31, 2004. The Company has not recorded any bad debt write-offs and it monitors its receivables closely to help ensure timely payment.

Property and Equipment

Property and equipment is stated at cost. Costs of major additions and betterments are capitalized; maintenance and repairs, which do not improve or extend the life of the respective assets are charged to expense. On disposal, the related cost and accumulated depreciation or amortization are removed from the accounts and any resulting gain or loss is included in the results of operations. Depreciation is computed using the straight-line method over the estimated useful lives of the assets which range from three to seven years. Leased assets meeting certain capital lease criteria are capitalized and the present value of the related lease payments is recorded as a liability. Assets under capital lease arrangements are depreciated using straight-line method over their estimated useful lives. Leasehold improvements are amortized over the estimated useful lives of the assets or related lease terms, whichever is shorter.

Long-Lived Assets

The Company evaluates the recoverability of its property and equipment when circumstances indicate that an event of impairment may have occurred in accordance with the provisions of Statement of Financial Account Standards (“SFAS”) No. 144, Accounting for the Impairment or Disposal of Long-Lived Assets (SFAS No. 144). SFAS No. 144 further refines the requirements of SFAS No. 121, Accounting for the Impairment of Long-Lived Assets and Long-Lived Assets to be Disposed of , that companies (1) recognize an impairment loss only if the carrying amount of a long-lived asset is not recoverable based on its undiscounted future cash flows and (2) measure an impairment loss as the difference between the carrying amount and fair value of the asset. Impairment is measured based on the difference between the carrying value of the related assets or businesses and the undiscounted future cash flows of such assets or businesses. In addition, SFAS No. 144 provides guidance on accounting and disclosure issues surrounding long-lived assets to be disposed of by sale. No impairment charges have been required to be recognized through December 31, 2005.

Revenue Recognition

Revenues associated with the Company’s collaboration with Sandoz (see Note 3) include an initial payment, reimbursement of development services and expenses, and potential future milestones and royalties. The initial payment represented reimbursement of specific development costs incurred prior to the date of the collaboration. Amounts earned under the collaboration agreement are not refundable if the research or development is unsuccessful. To date, the Company has not earned any milestones or royalties.

The Company uses revenue recognition criteria outlined in Staff Accounting Bulletin (“SAB”) No. 104, Revenue Recognition , and Emerging Issues Task Force (“EITF”) Issue 00-21, Revenue Arrangements with Multiple Deliverables (EITF 00-21). Accordingly, revenues from licensing agreements are recognized based on the performance requirements of the agreement. Non-refundable up-front fees, where the Company has an ongoing involvement or performance obligation, are recorded as deferred revenue in the balance sheet and amortized into collaboration revenue in the statement of operations over

66




the term of the performance obligation. Revenues from research and development services and expenses are recognized in the period the services are performed and the reimbursable costs are incurred.

Research and Development

Research and development costs are expensed as incurred. Research and development costs include wages, benefits, facility and other research-related overhead expenses, as well as license fees and contracted research and development activities.

Stock-Based Compensation

The Company has elected to account for its stock-based compensation plans following Accounting Principles Board Opinion No. 25, Accounting for Stock Issued to Employees (APB 25), and related interpretations, rather than the alternative fair value accounting provided under SFAS No. 123, Accounting for Stock-Based Compensation (SFAS 123). In accordance with EITF 96-18, Accounting for Equity Instruments that are Issued to Other than Employees for Acquiring, or in Connection with Selling Goods or Services (EITF 96-18), the Company records compensation expense equal to the fair value of options granted to non-employees over the vesting period, which is generally the period of service.

Pro forma information regarding net loss is required by SFAS 123 as if the Company had accounted for its stock-based awards to employees under the fair value method of SFAS 123. The fair value of the Company’s stock options used to compute pro forma net loss is the estimated value at the grant date using the Black-Scholes option-pricing model with the following weighted-average assumptions for each of the three years in the period ended December 31, 2005:

 

 

2005

 

2004

 

2003

 

Risk-free interest rate

 

4.0

%

3.7

%

3.5

%

Expected volatility

 

80

%

80

%

80

%

Expected lives

 

6.25 years

 

7 years

 

7 years

 

Expected dividend

 

 

 

 

 

The per-share, weighted-average grant date fair value of options granted during the years ended December 31, 2005, 2004 and 2003 were $10.33, $4.35 and $3.53, respectively.

67




For purposes of pro forma disclosures, the estimated fair value of the options is amortized over the vesting period of the options. Had compensation expense for the Company’s stock-based compensation plans been determined based on the fair value at the grant dates for awards under those plans consistent with the method of SFAS 123, the Company’s net loss for fiscal 2005, 2004 and 2003 would have been as follows:

 

 

2005

 

2004

 

2003

 

 

 

(in thousands, except per share data)

 

Net loss attributable to common stockholders as reported

 

$

(21,662

)

$

(36,316

)

$

(9,843

)

Add: Stock-based employee compensation expense included in reported net loss

 

1,510

 

1,799

 

280

 

Deduct: Stock-based employee compensation expense determined under fair value based method

 

(3,119

)

(1,148

)

(280

)

SFAS 123 Pro forma net loss

 

$

(23,271

)

$

(35,665

)

$

(9,843

)

Basic and diluted net loss per share

 

 

 

 

 

 

 

As reported

 

$

(0.79

)

$

(2.56

)

$

(5.02

)

SFAS 123 Pro forma

 

$

(0.85

)

$

(2.52

)

$

(5.02

)

 

Redeemable Convertible Preferred Stock

In connection with the closing of the Company’s initial public offering in the second quarter of 2004, all shares of redeemable convertible preferred stock were converted to common stock. Prior to our initial public offering, the carrying value of redeemable convertible preferred stock was increased by periodic accretions so that the carrying amount would equal the redemption value at the redemption date. These accretions were effected through charges against accumulated deficit. The holders of redeemable convertible preferred stock were entitled to dividends at 10% per annum through their redemption date, payable only upon redemption.

Income Taxes

The Company accounts for income taxes under SFAS No. 109, Accounting for Income Taxes . Under this method, deferred tax assets and liabilities are determined based on the differences between the financial reporting and tax bases of assets and liabilities and are measured using the enacted tax rates that will be in effect when the differences are expected to reverse. A valuation allowance is recorded when it is more likely than not that the deferred tax asset will not be recovered.

Comprehensive Loss

The Company reports comprehensive loss in accordance with SFAS No. 130, Reporting Comprehensive Income (SFAS 130). SFAS 130 establishes rules for the reporting and display of comprehensive loss and its components. Accumulated other comprehensive loss as of December 31, 2005 and 2004 consists entirely of unrealized losses on available-for-sale securities.

Net Loss Per Share

The Company computes net loss per share in accordance with SFAS No. 128, Earnings per Share (SFAS No. 128). Under the provisions of SFAS 128, basic net loss per common share is computed by dividing net loss by the weighted-average number of common shares outstanding. Diluted net loss per common share is computed by dividing net loss by the weighted-average number of common shares and dilutive common share equivalents then outstanding. Common equivalent shares consist of the incremental

68




common shares issuable upon the conversion of preferred stock, shares issuable upon the exercise of stock options and upon the exercise of warrants. The Company has excluded the impact of all convertible preferred stock, stock options and shares of common stock subject to repurchase from the calculation of historical diluted net loss per common share because all such securities are antidilutive for all periods presented. The total number of shares excluded from the calculations of historical diluted net loss per share was 1,783,611, 1,334,575 and  14,332,014 for the years ended December 31, 2005, 2004 and 2003, respectively.

Segment Reporting

The Company has adopted SFAS No. 131, Disclosure About Segments of an Enterprise and Related Information , which requires companies to report selected information about operating segments, as well as enterprisewide disclosures about products, services, geographical areas, and major customers. Operating segments are determined based on the way management organizes its business for making operating decisions and assessing performance. The Company has only one operating segment, the discovery, development and commercialization of drug products. All of our revenues through December 31, 2005 have come from one collaborative partner.

Recently Issued Accounting Standards

On December 16, 2004, the Financial Accounting Standards Board (“FASB”) issued FASB Statement No. 123 (revised 2004), Share-Based Payment, which is a revision of Statement of FASB Statement No. 123, Accounting for Stock-Based Compensation . Statement 123(R) supersedes APB Opinion No. 25, Accounting for Stock Issued to Employees , and amends FASB Statement No. 95, Statement of Cash Flows . Generally, the approach in Statement 123(R) is similar to the approach described in Statement 123. However, Statement 123(R) requires all share-based payments to employees, including grants of employee stock options, to be expensed based on their fair values. Pro forma disclosure is no longer an alternative. Statement 123(R) must be adopted in the first interim or annual period beginning after June 15, 2005, irrespective of the entity’s fiscal year. Early adoption will be permitted in periods in which financial statements have not yet been issued. The Company adopted Statement 123(R) on January 1, 2006.

Statement 123(R) permits public companies to adopt its requirements using one of two methods: “modified prospective method” in which compensation cost is recognized beginning with the effective date (a) based on the requirements of Statement 123(R) for all share-based payments granted after the effective date and (b) based on the requirements of Statement 123 for all awards granted to employees prior to the effective date of Statement 123(R) that remain unvested on the effective date or a “modified retrospective” method, which includes the requirements of the modified prospective method described above, but also permits entities to restate based on the amounts previously recognized under Statement 123 for purposes of pro forma disclosures either (a) all prior periods presented or (b) prior interim periods of the year of adoption. The Company has adopted the “modified prospective method” when applying Statement 123(R).

As permitted by Statement 123, the Company has accounted for share-based payments to employees using APB 25’s intrinsic value method and, as such, generally recognizes no compensation cost for employee stock options. Accordingly, the adoption of Statement 123(R) fair value method will have a significant impact on our result of operations, although it will have no impact on our overall financial position. Had the Company adopted Statement 123(R) in prior periods, the impact of that standard would have approximated the impact of Statement 123 as described in the disclosure of pro forma net loss per share earlier in this footnote. The Company currently expects stock option compensation expense for 2006 to be in a range of $5 million to $6 million dependent upon assumptions used in estimating the fair value, market price and levels of share-based payments granted in 2006. Any changes from current assumptions could result in significant variation from the Company’s current estimate.

69




3. Collaboration and License Agreements

Sandoz

In November 2003, the Company entered into a collaboration and license agreement with Sandoz to jointly develop and commercialize M-Enoxaparin, a generic version of Lovenox, a low molecular weight heparin. Under the terms of this agreement, the Company and Sandoz agreed to exclusively work with each other to develop and commercialize M-Enoxaparin for medical indications within the United States.

Under this collaboration, Sandoz makes certain payments to the Company. As mutually agreed, The Company provides, and Sandoz pays the Company for full-time equivalent scientific, technical and/or management work. Sandoz is also responsible for funding substantially all of the other ongoing development and commercialization costs and legal expenses incurred with respect to injectable enoxaparin, subject to termination rights upon reaching agreed upon limits. In addition, Sandoz will, in the event there are no third party competitors marketing a Lovenox-Equivalent Product, as defined in the agreement, share profits with the Company. Alternatively, in certain circumstances, if there are third party competitors marketing a Lovenox-Equivalent Product, Sandoz will pay royalties to the Company on net sales of injectable enoxaparin. If certain milestones are achieved with respect to injectable enoxaparin under certain circumstances, Sandoz may also make certain milestone payments to the Company, which would reach $55.0 million if all such milestones are achieved. A portion of  the development expenses and certain legal expenses which in the aggregate have exceeded a specified amount will be offset against the profit-sharing amounts, the royalties and the milestone payments. Sandoz may also offset a portion of any product liability costs and certain other expenses arising from patent litigation against any profit-sharing amounts, royalties and milestone payments.

The Company is in discussions with Sandoz regarding an exclusive license to develop and commercialize injectable enoxaparin outside of the United States. Sandoz may exercise a right of first negotiation to work with the Company on the research, development, manufacturing or commercialization inside and/or outside the United States, of a generic version of Fragmin and/or enoxaparin administered by any route of delivery other than injection or certain improved forms of enoxaparin.

Massachusetts Institute of Technology

The Company has two patent license agreements with the Massachusetts Institute of Technology (“M.I.T.”), that grant the Company various exclusive and nonexclusive worldwide licenses, with the right to grant sublicenses, under certain patents and patent applications relating to methods and technologies for analyzing and characterizing sugars and certain heparins, heparinases and other enzymes and synthesis methods. Subject to typical retained rights of M.I.T. and the United States government, the Company was granted exclusive rights under certain of these patents and applications in certain fields.

In exchange for these rights, the Company paid M.I.T. a license issue fee, and pays annual license maintenance fees. The Company, upon commercialization, is also required to pay M.I.T. royalties on products and services covered by the licenses and sold by the Company or its affiliates or sublicensees, a percentage of certain other income received by the Company from corporate partners and sublicensees, and certain patent prosecution and maintenance costs. M.I.T. and certain contributing individuals were also issued shares of the Company’s common stock. The Company recorded $82,500, $117,500 and $57,500 as research and development expense related to M.I.T. license and maintenance fees in the years ended December 31, 2005, 2004 and 2003 respectively.

The Company must meet certain diligence requirements in order to maintain its licenses under the two agreements. Under the agreements, the Company must expend at least $1.0 to $1.2 million per year commencing in 2005 towards the research, development and commercialization of products and processes covered by the agreements. In addition, the Company is obligated to make first commercial sales and meet certain minimum sales thresholds of products or processes including, under the amended and restated

70




agreement, a first commercial sale of a product or process no later than June 2013 and minimal sales of products thereafter, ranging from $0.5 million to $5.0 million annually.  If the Company fails to meet its diligence obligations, M.I.T. may, as its sole remedy, convert the exclusive licenses granted to the Company under the amended and restated license agreement to non-exclusive licenses. Under the license agreement covering sequencing machines, M.I.T. has the right to treat the Company’s failure to fulfill its diligence obligations as a material breach of the license agreement.

If, due to the Company’s failure to meet diligence obligations, M.I.T. converts certain of the Company’s exclusive licenses to non-exclusive, or if M.I.T. terminates one of the agreements, M.I.T. will honor the exclusive nature of the sublicense the Company granted to Sandoz so long as Sandoz both continues to fulfill its obligations to the Company under the collaboration and license agreement and agrees to assume the Company’s rights and obligations to M.I.T.

The Regents of the University of California through the Ernest Orlando Lawrence Berkeley National Laboratory

In November 2002, the Company entered into an agreement with The Regents of the University of California through the Ernest Orlando Lawrence Berkeley National Laboratory (“Lawrence Berkeley National Lab”) under which the Company licensed certain patents and applications covering the metabolic synthesis of sugars and glycoconjugates and were granted an exclusive license, with the right to grant sublicenses, for the synthesis, production or modification of sugars and glycoconjugates in or on biological molecules for purposes of researching, developing and commercializing products, services and processes for all human therapeutic applications, excluding the sale of research reagents. This agreement was subsequently amended as the Company elected to retain the license under the broad field.

In connection with this Agreement, the Company paid certain license fees and minimum royalties and recorded $130,000, $10,000, and $30,000 as research and development expense in the years ended December 31, 2005, 2004 and 2003 respectively. License fees include $100,000 expensed and paid to Lawrence Berkeley National Lab in 2005 for the election to retain the broader field and $20,000 expensed and paid in 2003. We are also required to pay Lawrence Berkeley National Lab earned royalties on products, services and processes covered by the license and sold by us or our affiliates or sublicensees, a percentage of certain other income received by us from our sublicensees, and patent prosecution and maintenance costs. To the extent that earned royalties in any given year do not meet certain threshold amounts, we are required to make annual minimum royalty payments to Lawrence Berkeley National Lab, ranging from $30,000 to $60,000, in order to maintain the license. The research and development expenses include $30,000, $10,000 and $10,000 in annual minimum royalties that the Company paid and recorded as expense during the years ended December 31, 2005, 2004 and 2003, respectively.

In order for the Company to retain its license, the Company must expend at least $1.0 million per year towards the research, development and commercialization of products covered by the agreement. If the Company fails to do so, Lawrence Berkeley National Lab may renegotiate the milestones, terminate the agreement or convert the exclusive license to a non-exclusive license. In order to maintain the broad field, the Company is required to and did expend an additional amount during 2005 towards the research, development and commercialization of products and processes covered by the license.

Siegfried (U.S.A.), Inc. and Siegfried Ltd.

In 2003, the Company entered into a process development and production agreement, as amended in 2004 and 2005, with Siegfried (U.S.A), Inc. and Siegfried Ltd. (“Siegfried”) under which the Company provided to Siegfried its existing laboratory-scale processes and analytical methods for the production of enoxaparin. The Company recorded $3.0 million, $0.8 million and $0.1 million as research and development expense for services from Siegfried during the years ended December 31, 2005, 2004 and 2003, respectively.

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4. Financial Instruments

The following is a summary of cash, cash equivalents, and marketable securities as of December 31, 2005, 2004 and 2003 (in  thousands):

December 31, 2005

 

 

 

Cost

 

Gross
Unrealized
Gains

 

Gross
Unrealized
Losses

 

Fair Value

 

Cash and money market funds

 

$

14,412

 

 

 

 

 

$

0

 

 

$

14,412

 

Corporate debt securities due in one
year or less

 

142,081

 

 

5

 

 

 

(244

)

 

141,842

 

Total

 

$

156,493

 

 

5

 

 

 

$

(244

)

 

$

156,254

 

Reported as:

 

 

 

 

 

 

 

 

 

 

 

 

 

Cash and cash equivalents

 

$

25,891

 

 

 

 

 

$

(1

)

 

$

25,890

 

Marketable securities

 

130,602

 

 

5

 

 

 

(243

)

 

130,364

 

Total

 

$

156,493

 

 

5

 

 

 

$

(244

)

 

$

156,254

 

 

December 31, 2004

 

 

 

Cost

 

Gross
Unrealized
Losses

 

Fair Value

 

Cash and money market funds

 

$

8,681

 

 

$

 

 

 

$

8,681

 

 

Corporate debt securities

 

 

 

 

 

 

 

 

 

 

 

Due in one year or less

 

37,144

 

 

(98

)

 

 

37,046

 

 

Due in one to two years

 

7,955

 

 

(61

)

 

 

7,894

 

 

Total corporate debt securities

 

45,099

 

 

(159

)

 

 

44,940

 

 

 

 

$

53,780

 

 

$

(159

)

 

 

$

53,621

 

 

Reported as:

 

 

 

 

 

 

 

 

 

 

 

Cash and cash equivalents

 

$

11,678

 

 

$

 

 

 

$

11,678

 

 

Marketable securities

 

42,102

 

 

(159

)

 

 

41,943

 

 

 

 

$

53,780

 

 

$

(159

)

 

 

$

53,621

 

 

 

The aggregate fair value of corporate debt securities in an unrealized loss position for less than one year was approximately $118.7 million and $41.0 million at December 31, 2005 and 2004, respectively. The aggregate fair value of corporate debt securities in an unrealized loss position for one year or greater was approximately $7.8 million and $0 at December 31, 2005 or 2004, respectively. The Company reviews its investments for other than temporary impairment whenever the fair value of an investment is less than the amortized cost and evidence indicates that an investment’s carrying value is not recoverable within a reasonable period of time. Investments in an unrealized loss position were caused by fluctuations in interest rates. The Company reviewed its investments with unrealized losses and has concluded that no other-than-temporary impairment existed at December 31, 2005 and 2004 as the Company has the ability and intent to hold these investments to maturity. The Company had no realized gains or losses during the years ended December 31, 2005, 2004 or 2003.

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5. Property and Equipment

At December 31, 2005 and 2004, property and equipment, net consists of the following (in thousands):

 

 

2005

 

2004

 

Depreciable
Lives

 

Computer equipment

 

$

498

 

$

307

 

3 years

 

Software

 

270

 

156

 

3 years

 

Office furniture and equipment

 

496

 

314

 

5 to 6 years

 

Laboratory equipment

 

3,915

 

2,336

 

7 years

 

Leasehold improvements

 

401

 

473

 

Shorter of asset life or lease term

 

Equipment purchased under capital lease obligations

 

1,656

 

 

3 to 7 years

 

Less: accumulated depreciation

 

(1,319

)

(863

)

 

 

 

 

$

5,917

 

$

2,723

 

 

 

 

Depreciation and amortization expense, including amortization of assets recorded under capital leases, amounted to $967,000, $526,000, and $252,000 for the years ended December 31, 2005, 2004 and 2003, respectively.

6. Restricted Cash

In September 2004, $1.5 million of the Company’s cash was designated as collateral for a letter of credit related to the lease of office and laboratory space. This balance will remain restricted during the 80-month lease term and the Company will continue to earn interest on the balance. In December 2005, this balance was increased to $1.8 million due to an increase in leased space.

7. Accrued Expenses

At December 31, 2005 and 2004, accrued expenses consisted of the following (in thousands):

 

 

2005

 

2004

 

Accrued compensation

 

$

1,552

 

$

629

 

Accrued contracted research costs

 

911

 

460

 

Accrued professional fees

 

629

 

343

 

Other

 

263

 

179

 

 

 

$

3,355

 

$

1,611

 

 

8. Preferred Stock

Series C Redeemable Convertible Preferred Stock

In February 2004, the Company sold 2,612,696 shares of Series C redeemable convertible preferred stock for net proceeds of $20.4 million. These shares contained a beneficial conversion feature based on the fair value of the Company’s common stock at the date of such sale compared to the Series C redeemable convertible preferred stock share price. For financial accounting purposes, the total value of the beneficial conversion feature of approximately $20.4 million was recognized as a dividend in the first quarter of 2004.

On June 25, 2004, the Company completed an initial public offering of its common stock. In connection with the closing of its initial public offering, each share of the Company’s redeemable

73




convertible preferred stock was converted into that number of shares of common stock that resulted from dividing $1.00, $1.7067, $2.87, $2.95 and $7.8463 for the Series A Preferred, the Series A Prime Preferred, the Series A Double Prime Preferred, the Series B Preferred and the Series C Preferred, respectively, by the then-applicable conversion price for each series of preferred stock in effect at the time of conversion which was $0.78, $1.33, $2.24, $2.31 and $6.13 for the Series A Preferred, the Series A Prime Preferred, the Series A Double Prime, the Series B Preferred and the Series C Preferred, respectively. In the aggregate, 15,014,415 shares of common stock were issued in connection with such conversion.

Shareholders’ Rights Agreement

Effective November 7, 2005, the Board of Directors of the Company declared a dividend of one right (collectively, the “Rights”) to buy one one-thousandth of a share of newly designated Series A Junior Participating Preferred Stock (“Series A Junior Preferred Stock”) for each outstanding share of the Company’s common stock to stockholders of record at the close of business on November 18, 2005. Initially, the Rights are not exercisable and will be attached to all certificates representing outstanding shares of common stock, and no separate Rights Certificates will be distributed. The Rights will expire at the close of business on November 6, 2008 unless earlier redeemed or exchanged. Until a right is exercised, the holder thereof, as such, will have no rights as a stockholder of the Company, including the right to vote or to receive dividends. The rights are not immediately exercisable. Subject to the terms and conditions of the Rights Agreement entered into by the Company with American Stock Transfer & Trust Company, as Rights Agent (the “Rights Agreement”), the Rights will become exercisable upon the earlier of (1) 10 business days following the later of (a) the first date of a public announcement that a person or group (an “Acquiring Person”) acquires, or obtained the right to acquire, beneficial ownership of 20 percent or more of the outstanding shares of common stock of the Company or (b) the first date on which an executive officer of the Company has actual knowledge that an Acquiring Person has become such or (2) 10 business days following the commencement of a tender offer or exchange offer that would result in a person or group beneficially owning more than 20 percent of the outstanding shares of common stock of the Company. Each right entitles the holder to purchase one one-thousandth of a share of Series A Junior Preferred Stock at an initial purchase price of $125.00 in cash, subject to adjustment. In the event that any person or group becomes an Acquiring Person, unless the event causing the 20% threshold to be crossed is an offer permitted pursuant to the Rights Agreement, each Right not owned by the Acquiring Person will entitle its holder to receive, upon exercise, that number of shares of common stock of the Company (or in certain circumstances, cash, property or other securities of the Company) which equals the exercise price of the Right divided by 50% of the current market price (as defined in the Rights Agreement) per share of such common stock at the date of the occurrence of the event. In the event that, at any time after any person or group becomes an Acquiring Person, (i) the Company is consolidated with, or merged with and into, another entity and the Company is not the surviving entity of such consolidation or merger (other than a consolidation or merger which follows a Permitted Offer) or if the Company is the surviving entity, but shares of its outstanding Common Stock are changed or exchanged for stock or securities (of any other person) or cash or any other property, or (ii) more than 50% of the Company’s assets or earning power is sold or transferred, each holder of a Right (except Rights which previously have been voided as set forth in the Rights Agreement) shall thereafter have the right to receive, upon exercise, that number of shares of common stock of the acquiring company which equals the exercise price of the Right divided by 50% of the current market price of such common stock at the date of the occurrence of the event.

9. Warrants

In 2002, in connection with a bank line of credit agreement, the Company granted a warrant to purchase 12,500 shares of Series A Double Prime Redeemable Convertible Preferred Stock at an exercise price of $2.87 per share. The fair value of the warrant was estimated to be $29,875, which was recorded as additional paid-in capital and as prepaid interest at December 31, 2002. This prepaid interest amount was

74




amortized as interest expense over the 36-month term of the line of credit. On November 30, 2004, the warrant was exercised and the Company issued 11,569 shares of common stock in connection with a cashless exercise.

10. Common Stock

Holders of common stock are entitled to one vote per share on all matters to be voted upon by the stockholders of the Company.

Shares of common stock reserved for future issuance at December 31, 2005 are as follows (in thousands):

Shares available for grant under stock option plans

 

2,794

 

Shares available for exercise of stock options

 

1,969

 

Shares available for grant under employee stock purchase plan

 

513

 

Total

 

5,276

 

 

In June 2004, the Company successfully completed an initial public offering of its common stock. The initial public offering consisted of the sale of 5,350,000 shares of common stock at a price of $6.50 per share. As part of the offering, the Company granted to the underwriters an option to purchase an additional 802,500 shares within 30 days of the initial public offering to cover over-allotments. This option was exercised in full in connection with the closing of the initial public offering. Net proceeds from the initial public offering after deducting underwriters’ discounts and expenses were $35.3 million.

In July 2005, the Company raised $122.3 million in a follow-on public offering, net of expenses, from the sale and issuance of 4,827,300 shares of common stock. The price to the public was $27.02 per share.

Share Restriction Agreements

On June 13, 2001, the Company entered into Restricted Stock Purchase Agreements with certain employees and non-employees to purchase an aggregate of 2,680,003 shares of common stock. Each Restricted Stock Purchase Agreement provides for the repurchase of common stock held by these individuals and entities by the Company at a rate of $0.0001 per share, the original purchase price, adjustable for certain dilutive events, until the shares vest. The repurchase provisions lapsed over a 45-month period ended June 2005.

During 2002, the Company entered into Restricted Stock Purchase Agreements with two officers and a non-employee to purchase an aggregate of 1,101,870 shares of common stock. Pursuant to one of the Restricted Stock Purchase Agreements, 980,859 shares of common stock were sold to an officer for $106,662. The purchase price was payable ratably over approximately three years and is included in stockholders’ equity as Due from Officer. During the first quarter of 2005 the final payment was made. At December 31, 2005, each Restricted Stock Purchase Agreement provides for the repurchase of common stock by the Company at a price equal to the original price paid, adjustable for certain dilutive events, until the shares vest. The repurchase provisions generally lapse over a three-to four-year period provided that each recipient subject to such agreements continues service with the Company. At December 31, 2005 and 2004, respectively, there were 64,967 and 667,733 shares of unvested restricted common stock outstanding under these agreements.

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11. Stock Option Plans

The Company’s 2002 Stock Incentive Plan, as amended, provides for the granting of stock options and restricted stock to employees, officers, directors, consultants and advisors to purchase the Company’s Common Stock. As of December 31, 2005, the Company was authorized to issue options to purchase 1,316,687 shares of Common Stock under the 2002 Stock Incentive Plan. Options granted under the 2002 Stock Incentive Plan may be Incentive Stock Options or Nonstatutory Stock Options under the applicable provisions of the Internal Revenue Code. Since the effective date of the 2004 Stock Incentive Plan described below, the Company no longer grants options under the 2002 Stock Incentive Plan. Any authorized and ungranted shares, and unvested shares granted that are returned to the Company as a result of terminations will subsequently lapse.

Pursuant to the terms of the Company’s 2004 Stock Incentive Plan, as amended, (the “Incentive Plan”), the Company is authorized to issue up to 3,948,785 shares of common stock with annual increases (to be added on the first day of the Company’s fiscal years during the period beginning in fiscal year 2005 and ending on the second day of fiscal year 2013) equal to the lowest of (i) 1,974,393 shares, (ii) 5% of the then outstanding number of common shares or (iii) such other amount as the Board of Directors may authorize. The Company’s Board of Directors elected not to increase the number of authorized shares related to the Incentive Plan for 2006.

Incentive Stock Options are granted only to employees of the Company. Incentive Stock Options granted to employees who own more than 10% of the total combined voting power of all classes of stock will be granted at no less than 110% of the fair market value of the Company’s common stock on the date of grant. Non-statutory Stock Options may be granted to employees, officers, directors, consultants and advisors. Incentive Stock Options generally vest ratably over four years. Non-statutory Stock Options granted have varying vesting schedules. The options generally expire ten years after the date of grant.

The following table summarizes all stock option plan activity (in thousands, except per share data):

 

 

Options
Outstanding

 

Exercise Price
Per Share

 

Weighted-Average
Exercise Price

 

Balance at December 31, 2002

 

 

433

 

 

$

0.08—0.23

 

 

$

0.22

 

 

Options granted

 

 

621

 

 

0.23—0.60

 

 

0.34

 

 

Options exercised

 

 

(23

)

 

0.08—0.23

 

 

0.22

 

 

Balance at December 31, 2003

 

 

1,031

 

 

$

0.08—0.60

 

 

$

0.29

 

 

Options granted

 

 

392

 

 

0.60—8.65

 

 

5.62

 

 

Options exercised

 

 

(67

)

 

0.23—4.91

 

 

0.41

 

 

Options cancelled

 

 

(21

)

 

0.23—4.91

 

 

0.49

 

 

Balance at December 31, 2004

 

 

1,335

 

 

$

0.08—8.65

 

 

$

1.85

 

 

Options granted

 

 

969

 

 

4.91-28.44

 

 

13.28

 

 

Options exercised

 

 

(217

)

 

0.08-8.09

 

 

0.84

 

 

Options cancelled

 

 

(118

)

 

0.23-8.65

 

 

1.02

 

 

Balance at December 31, 2005

 

 

1,969

 

 

$

0.08-28.44

 

 

$

7.63

 

 

 

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The following table summarizes information about options outstanding at December 31, 2005 (in thousands, except per share data):

 

 

Options Outstanding

 

Options Exercisable

 

Range of
Exercise Prices

 

Number of
Shares

 

Weighted-Average
Exercise Price

 

Weighted-Average
Remaining
Contractual Life
(In years)

 

Number of
Shares

 

Weighted Average
Exercise Price

 

$0.08—0.231

 

 

529

 

 

 

$

0.23

 

 

 

7.15

 

 

 

317

 

 

 

$

0.23

 

 

0.60—7.50

 

 

500

 

 

 

3.85

 

 

 

8.34

 

 

 

174

 

 

 

2.78

 

 

7.73—10.44

 

 

630

 

 

 

9.52

 

 

 

9.13

 

 

 

55

 

 

 

8.14

 

 

11.35—28.44

 

 

310

 

 

 

22.58

 

 

 

9.26

 

 

 

3

 

 

 

27.18

 

 

 

 

 

1,969

 

 

 

$

7.63

 

 

 

8.42

 

 

 

549

 

 

 

$

2.00

 

 

 

During 2005, 2004 and 2003, the Company granted 59,800, 204,285, and 621,155 options, respectively, to employees at exercise prices that were deemed to be below the fair value of the Company’s common stock. The weighted average exercise price of these options was $4.91, $3.39 and $0.34 for 2005, 2004 and 2003, respectively.

Stock-Based Compensation

The Company amortizes the deferred stock-based compensation of employee options and restricted stock to compensation expense based on the straight-line method over the vesting periods of the applicable stock options and restricted stock, generally four years. Compensation expense of $1.5 million, $1.4 million and $0.7 million was recognized for employee options and restricted stock, net of forfeitures during the years ending December 31, 2005, 2004 and 2003, respectively.

As discussed in Note 2, the Company applies APB 25 and related interpretations in accounting for stock options granted under its stock option plans. In December 2005, in an effort to avoid adverse personal income tax consequences under Section 409A of the Internal Revenue Code, the Company amended certain outstanding options to purchase 73,600 shares of common stock with an exercise price of $0.99 per share (the “Original Options”) held by two officers of the Company. As amended, the portion of the Original Options vested as of December 31, 2004, or 13,800 shares, continue to have an exercise price of $0.99. The remaining portion of the Original Options were cancelled and replacement options for the purchase of 59,800 shares were granted to the officers at an increased exercise price equal to $4.91 (the “Replacement Options”). The Company recorded $0.4 million in deferred compensation during the year ending December 31, 2005 related to these replacement options. The Company recorded $1.7 million and $2.0 million during the years ending December 31, 2004 and 2003, respectively, in deferred compensation for employee stock options granted at exercise prices deemed to be below the fair value of common stock.

During 2004, the Company recorded non-cash compensation expense of $0.4 million related to the accelerated vesting of stock options for an officer in connection with a termination agreement.

Common Stock Options to Consultants

As of December 31, 2005, the Company had granted options to purchase 136,600 shares of common stock to consultants, 35,800 of which were granted to two individuals who are also members of the Board of Directors, 25,598 of which were exercised, none of which were subject to repurchase, and 45,245 of which were unvested. These options were granted in exchange for consulting services to be rendered and vest over periods of up to four years. The Company recorded charges to operations for stock options granted to consultants using the graded-vesting method of $783,000, $221,000, and $184,000 during the years ending December 31, 2005, 2004 and 2003, respectively.

The unvested shares held by consultants have been and will be revalued using the Company’s estimate of fair value at each balance sheet date pursuant to EITF 96-18.

77




12. Income Taxes

A reconciliation of federal statutory income tax provision to the Company’s actual provision for the years ended December 31, 2005, 2004 and 2003 is as follows:

 

 

2005

 

2004

 

2003

 

Benefit at federal statutory tax rate

 

$

(7,365

)

$

(4,785

)

$

(2,701

)

Unbenefited operating losses

 

6,884

 

4,060

 

2,382

 

Other

 

481

 

725

 

319

 

Income tax provision (benefit)

 

$

 

$

 

$

 

 

Deferred income taxes reflect the net tax effects of temporary differences between the carrying amounts of assets and liabilities for financial reporting purposes and the amounts used for income tax purposes. Significant components of the Company’s deferred tax assets are as follows (in thousands):

 

 

December 31,

 

 

 

2005

 

2004

 

Deferred tax assets:

 

 

 

 

 

Federal and state net operating losses

 

$

17,608

 

$

9,267

 

Research credits

 

1,937

 

858

 

Deferred compensation

 

27

 

52

 

Deferred revenue

 

109

 

168

 

Accrued expenses

 

77

 

100

 

Total deferred tax assets

 

19,758

 

10,445

 

Deferred tax liabilities:

 

 

 

 

 

Depreciation

 

(196

)

(128

)

Total deferred tax liabilities

 

(196

)

(128

)

Valuation allowance

 

(19,562

)

(10,317

)

Net deferred tax assets

 

$

 

$

 

 

Realization of deferred tax assets is dependent upon future earnings, if any, the timing and amount of which are uncertain. Accordingly, the net deferred tax assets have been fully offset by a valuation allowance. The valuation allowance increased by $9.2 million and $4.9 million for the years ended December 31, 2005 and 2004, respectively as a result of the reserve for the tax benefit on the current period loss.

As of December 31, 2005, the Company had net operating loss carryforwards of $43.7 million to offset future federal and state taxable income. The Company also has federal and state research and development tax credits of approximately $1.3 million and $0.9 million, respectively, as of December 31, 2005. The net operating loss carryforwards and federal research credits expire at various times through 2025.

Utilization of the Company’s net operating loss may be subject to substantial annual limitation due to the ownership change limitations provided by Internal Revenue Code (IRC) Sections 382 and 383 and similar state provisions. Such an annual limitation could result in the expiration of net operating losses and/or tax credits before utilization. As of December 31, 2005, the Company has a portion of deferred tax assets that pertain to net operating loss carryforwards resulting from the exercise of employee stock options. If recognized, the tax benefit of these losses will be accounted for as a credit to stockholders’ equity.

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13. Line of Credit

In December 2002, the Company entered into an equipment line of credit with Silicon Valley Bank (the “Bank”), which provided for the Company to draw up to $1.2 million through March 31, 2003. Borrowings under the line bear interest at a rate between 5.0% and prime plus 0.25% and are payable over a 36-month period from the cash drawn date. The line of credit includes a provision that any material adverse change in the Company or its business may be considered an event of default. There have been no events of default. In December 2004, the Company entered into a Loan Modification Agreement (the “Loan Modification Agreement”) with the Bank to amend selected terms and conditions of the Security Agreement of December 2002 by and between the Company and the Bank (the “Original Credit Facility”). Under the Loan Modification Agreement, the Company and the Bank agreed to amend the Original Credit Facility to, among other things, conform certain provisions of the Original Credit Facility to the Loan Agreement (see below), including the grant of security interest. The Company’s ability to draw down any amounts under the Original Credit Facility expired on May 30, 2003, which term was not extended under the Loan Modification Agreement. As of December 31, 2005, the Company had approximately $35,000 in borrowings outstanding under the Original Credit Facility, as amended by the Loan Modification Agreement.

In December 2004, the Company entered into a Loan and Security Agreement (the “Loan Agreement”) with the Bank. Under the terms of the Loan Agreement, the Company may borrow up to an aggregate of $3.0 million through September 30, 2005 solely for reimbursement of purchases of Eligible Equipment, as defined under the Loan Agreement. As of December 31, 2005, the Company had drawn $3.0 million against the Loan Agreement. The Company was not obligated to draw down any amounts under the Loan Agreement and any borrowings bear interest at the per annum rate of the U.S. Treasury note yield to maturity for a term equal to forty-two months plus 5%, which rate was fixed on the funding date for each advance under the Loan Agreement. Advances under the Loan Agreement are to be repaid over a forty-two month period commencing on the applicable funding date. To secure the payment and performance in full of the Company’s obligations under the Loan Agreement, the Company granted to the Bank a continuing security interest in the Collateral, as such term is defined under the Loan Agreement and which essentially includes all Eligible Equipment and records relating thereto. As of December 31, 2005, the Company had approximately $2.4 million in borrowings outstanding under the Loan Agreement .

14. Commitments and Contingencies

In December 2005, the Company entered into a Master Lease Agreement (the “Agreement”) with General Electric Capital Corporation (“GECC”). Under the Agreement, the Company may lease office, laboratory, computer and other equipment from GECC in the aggregate total amount of up to $3.0 million by executing specified equipment schedules with GECC on or prior to December 31, 2006. Each equipment schedule will specify the lease term with respect to the underlying leased equipment. As of December 31, 2005, the Company had drawn $1.7 million against the Agreement. Borrowings under the agreement are payable over a 54 month period at an effective annual interest rate of 7.51%. In accordance with the Agreement, should the effective corporate income tax rate for calendar-year taxpayers increase above 35%, GECC will have the right to increase rent payments by requiring payment of a single additional sum, calculated in accordance with the Agreement. The Agreement also provides the Company an early purchase option after 48 months at a predetermined fair market value, which the Company intends to exercise. Under the Agreement, if any material adverse change in the Company or its business occurs, the total unpaid principal would become immediately due and payable.  There have been no events of default.

79




The Company leases office space and equipment under various operating lease agreements. Rent expense for office space under operating leases amounted to $2,664,000, $869,000, and $329,000 for the years ended December 31, 2005, 2004 and 2003, respectively.

In September 2004, the Company entered into a sublease agreement with Vertex Pharmaceuticals, as sublandlord, to sublease 20,000 square feet for an initial period of approximately six months, and 45,000 square feet of office and laboratory space, thereafter. The term of the sublease is 80 months commencing on September 15, 2004. The Company has an option to extend the sublease for one additional term of 48 months expiring on April 30, 2015, or on such other earlier date as provided in accordance with the sublease agreement. In November 2005, the Company amended its sublease agreement to lease an additional 33,454 square feet in its current premises, through April 2011.

Future minimum capital and total operating lease commitments as of December 31, 2005 are as follows (in thousands):

 

 

Operating Lease

 

Capital Lease

 

2006

 

 

$

3,170

 

 

 

$

400

 

 

2007

 

 

3,562

 

 

 

408

 

 

2008

 

 

3,556

 

 

 

408

 

 

2009

 

 

3,556

 

 

 

762

 

 

2010

 

 

3,556

 

 

 

 

 

2011 and beyond

 

 

1,185

 

 

 

 

 

Total future minimum lease payments

 

 

$

18,585

 

 

 

1,978

 

 

Less—Amounts representing interest

 

 

 

 

 

 

(319

)

 

Capital lease obligation at December 31, 2005

 

 

 

 

 

 

1,659

 

 

Less—Current maturities

 

 

 

 

 

 

(284

)

 

Capital lease obligation, net of current maturities

 

 

 

 

 

 

$

1,375

 

 

 

In connection with license arrangements with the research universities discussed in Note 3, the Company has certain annual fixed obligations to pay these institutions fees for the technology licensed. At December 31, 2005, financial obligations under these agreements for each year in the next five years range from $0.1 million to $0.2 million. After 2010, the annual obligations, which extend indefinitely are approximately $0.2 million per year. The Company may terminate the agreements at any time without obligation for future payments. Annual payments may be applied towards royalties payable to the licensors for that year for product sales, sublicensing of the patent rights or joint development revenue.

Companies that seek to market generic versions of branded products can be sued for infringing patents that purportedly cover such products and/or methods of using such products if the proposed marketing is to occur before such patents expire. Although the Company is not currently engaged in any actual or threatened material litigation, the Company believes that its product development plans will likely cause such litigation in the future. The accompanying financials do not include any provision or reserves for such potential litigation.

15. 401(k) Plan and Employee Stock Purchase Plan

The Company has a defined contribution 401(k) plan available to eligible employees. Employee contributions are voluntary and are determined on an individual basis, limited by the maximum amounts allowable under federal tax regulations. The Company has discretion to make contributions to the plan. In March 2005, the Company’s Board of Directors approved a match of 50% of the first 6% contributed by employees, effective for the 2004 plan year, and thereafter. The Company recorded  $0.2 million  of such match expense in the year ended December 31, 2005. The amount contributed in 2004 by the Company was immaterial.

80




The Company’s 2004 Employee Stock Purchase Plan (the “Purchase Plan”) became effective on June 25, 2004, the effective date of our initial public offering. The Purchase Plan allows employees to purchase stock at a price equal to 85% of the lower of the closing price of the Company’s common stock on the first day or the last day (January 31, 2005) for the first plan period. Subsequent periods will be for the 12 months ended January 31. In February 2006, the Purchase Plan was amended to provide for two 6-month plan periods, the first plan period from February 1 through July 31 and the second from August 1 through January 31.

16. Related Party Transactions

The Company purchased $1.5 million and  $0.4 million of heparin in 2005 and 2004, respectively, from Sandoz GmbH, which in turn was reimbursed under the Company’s collaboration agreement with Sandoz N.V. and Sandoz, Inc.

Parivid, LLC, a company that provides data integration and analysis services to the Company, is considered to be a related party as a Co-Founder and member of the Company’s Board of Directors is the brother of the chief technical officer of Parivid. The Company recorded $0.7 million and $1.0 million as research and development expense related to work performed by Parivid in the years ended December 31, 2005 and 2004, respectively. The Company had no Parivid expenses in 2003. At December 31, 2005, the Company had no outstanding payables with Parivid.

17. Selected Quarterly Financial Data (Unaudited) (in thousands, except per share data)

 

 

Quarter Ended

 

 

 

March 31

 

June 30

 

September 30

 

December 31

 

2005

 

 

 

 

 

 

 

 

 

 

 

 

 

Collaborative revenues

 

$

3,773

 

$

3,364

 

 

$

2,957

 

 

 

$

4,385

 

 

Net loss

 

(3,770

)

(4,580

)

 

(6,001

)

 

 

(7,311

)

 

Basic and diluted net loss per common share attributable to common stockholders

 

$

(0.15

)

$

(0.18

)

 

$

(0.21

)

 

 

$

(0.24

)

 

Shares used in computing basic and diluted net loss per share attributable to common stockholders

 

24,866

 

25,116

 

 

28,736

 

 

 

30,341

 

 

2004

 

 

 

 

 

 

 

 

 

 

 

 

 

Collaborative revenues

 

$

1,037

 

$

2,115

 

 

$

1,843

 

 

 

$

2,837

 

 

Net loss

 

(2,582

)

(2,890

)

 

(4,270

)

 

 

(4,333

)

 

Net loss attributable to common stockholders

 

(23,788

)

(3,924

)

 

(4,270

)

 

 

(4,333

)

 

Basic and diluted net loss per common share attributable to common stockholders

 

$

(9.04

)

$

(0.79

)

 

$

(0.18

)

 

 

$

(0.18

)

 

Shares used in computing basic and diluted net loss per share attributable to common stockholders

 

2,631

 

4,985

 

 

24,309

 

 

 

24,559

 

 

 

Per common share amounts for the quarters and full years have been calculated separately. Accordingly, quarterly amounts may not add to the annual amount because of differences in the weighted average common shares outstanding during each period principally due to the effect of the Company’s issuing shares of its common stock during the year.

Diluted and basic net loss per common share are identical since common equivalent shares are excluded from the calculation, as their effect is anti-dilutive.

Item 9.                         CHANGES IN AND DISAGREEMENTS WITH ACCOUNTANTS ON ACCOUNTING AND FINANCIAL DISCLOSURE

Not applicable.

81




Item 9A.                 CONTROLS AND PROCEDURES.

1. Disclosure Controls and Procedures

Our management, with the participation of our chief executive officer and chief financial officer, evaluated the effectiveness of our disclosure controls and procedures as of December 31, 2005. The term “disclosure controls and procedures,” as defined in Rules 13a-15(e) and 15d-15(e) under the Securities Exchange Act of 1934, means controls and other procedures of a company that are designed to ensure that information required to be disclosed by the Company in the reports that it files or submits under the Securities Exchange Act of 1934 is recorded, processed, summarized and reported, within the time periods specified in the SEC’s rules and forms. Disclosure controls and procedures include, without limitation, controls and procedures designed to ensure that information required to be disclosed by a company in the reports that it files or submits under the Securities Exchange Act of 1934 is accumulated and communicated to the company’s management, including its principal executive and principal financial officers, as appropriate to allow timely decisions regarding required disclosure. Management recognizes that any controls and procedures, no matter how well designed and operated, can provide only reasonable assurance of achieving their objectives and management necessarily applies its judgment in evaluating the cost-benefit relationship of possible controls and procedures. Based on this evaluation, our chief executive officer and chief financial officer concluded that, as of December 31, 2005, our disclosure controls and procedures were effective at the reasonable assurance level.

2. Internal Controls Over Financial Reporting

(a)   Management’s Annual Report on Internal Control Over Financial Reporting

The management of Momenta is responsible for establishing and maintaining adequate internal control over financial reporting. Internal control over financial reporting is defined in Rule 13a-15(f) or 15d-15(f) promulgated under the Securities Exchange Act of 1934 as a process designed by, or under the supervision of, the company’s principal executive and principal financial officers and effected by the company’s board of directors, management and other personnel, to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with generally accepted accounting principles and includes those policies and procedures that:

·        Pertain to the maintenance of records that in reasonable detail accurately and fairly reflect the transactions and dispositions of the assets of the company;

·        Provide reasonable assurance that transactions are recorded as necessary to permit preparation of financial statements in accordance with generally accepted accounting principles, and that receipts and expenditures of the company are being made only in accordance with authorizations of management and directors of the company; and

·        Provide reasonable assurance regarding prevention or timely detection of unauthorized acquisition, use or disposition of the company’s assets that could have a material effect on the financial statements.

Because of its inherent limitations, internal control over financial reporting may not prevent or detect misstatements. Projections of any evaluation of effectiveness to future periods are subject to the risk that controls may become inadequate because of changes in conditions, or that the degree of compliance with the policies or procedures may deteriorate.

Momenta’s Chief Executive Officer and Chief Financial Officer, along with certain members of Momenta’s management, assessed the effectiveness of the Company’s internal control over financial reporting as of December 31, 2005. In making this assessment, the Company’s management used the

82




criteria set forth by the Committee of Sponsoring Organizations of the Treadway Commission (COSO) in “Internal Control-Integrated Framework.”

Based on our assessment, management has concluded that, as of December 31, 2005, the Company’s internal control over financial reporting is effective based on those criteria.

The Company’s independent registered public accounting firm has issued its report on our assessment and effectiveness of the Company’s internal control over financial reporting. This report appears below.

(b)   Report of the Independent Registered Public Accounting Firm

83




Report of Independent Registered Public Accounting Firm

The Board of Directors and Stockholders of Momenta Pharmaceuticals, Inc.

We have audited management’s assessment, included in the accompanying Management’s Annual Report on Internal Control Over Financial Reporting, that Momenta Pharmaceuticals, Inc. maintained effective internal control over financial reporting as of December 31, 2005, based on criteria established in Internal Control—Integrated Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission (the COSO criteria). Momenta Pharmaceuticals, Inc.’s management is responsible for maintaining effective internal control over financial reporting and for its assessment of the effectiveness of internal control over financial reporting. Our responsibility is to express an opinion on management’s assessment and an opinion on the effectiveness of the company’s internal control over financial reporting based on our audit.

We conducted our audit in accordance with the standards of the Public Company Accounting Oversight Board (United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about whether effective internal control over financial reporting was maintained in all material respects. Our audit included obtaining an understanding of internal control over financial reporting, evaluating management’s assessment, testing and evaluating the design and operating effectiveness of internal control, and performing such other procedures as we considered necessary in the circumstances. We believe that our audit provides a reasonable basis for our opinion.

A company’s internal control over financial reporting is a process designed to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with generally accepted accounting principles. A company’s internal control over financial reporting includes those policies and procedures that (1) pertain to the maintenance of records that, in reasonable detail, accurately and fairly reflect the transactions and dispositions of the assets of the company; (2) provide reasonable assurance that transactions are recorded as necessary to permit preparation of financial statements in accordance with generally accepted accounting principles, and that receipts and expenditures of the company are being made only in accordance with authorizations of management and directors of the company; and (3) provide reasonable assurance regarding prevention or timely detection of unauthorized acquisition, use, or disposition of the company’s assets that could have a material effect on the financial statements.

Because of its inherent limitations, internal control over financial reporting may not prevent or detect misstatements. Also, projections of any evaluation of effectiveness to future periods are subject to the risk that controls may become inadequate because of changes in conditions, or that the degree of compliance with the policies or procedures may deteriorate.

In our opinion, management’s assessment that Momenta Pharmaceuticals, Inc. maintained effective internal control over financial reporting as of December 31, 2005, is fairly stated, in all material respects, based on the COSO criteria. Also, in our opinion, Momenta Pharmaceuticals, Inc. maintained, in all material respects, effective internal control over financial reporting as of December 31, 2005, based on the COSO criteria .

We also have audited, in accordance with the standards of the Public Company Accounting Oversight Board (United States), the consolidated balance sheets of Momenta Pharmaceuticals, Inc. as of December 31, 2005 and 2004, and the related consolidated statements  of operations, redeemable convertible preferred stock, stockholders’ equity (deficit) and comprehensive loss and cash flows for each of the three years in the period ended December 31, 2005 of Momenta Pharmaceuticals, Inc. and our report dated March 13, 2006 expressed an unqualified opinion thereon.

/s/ Ernst & Young LLP

Boston, Massachusetts

 

March 13, 2006

 

 

84




(c)   Changes in Internal Control Over Financial Reporting

No change in our internal control over financial reporting (as defined in Rules 13a-15(f) and 15d-15(f) under the Exchange Act) occurred during the fiscal quarter ended as of December 31, 2005 that has materially affected, or is reasonably likely to materially affect, our internal control over financial reporting.

Item 9B.                OTHER INFORMATION

Not applicable.

85




PART III

Item 10.                  DIRECTORS AND EXECUTIVE OFFICERS OF THE REGISTRANT

The information relating to our directors, nominees for election as directors and executive officers under the headings “Election of Directors”, “Executive Officers” and “Section 16(a) Beneficial Ownership Reporting Compliance” in our definitive proxy statement for the 2006 Annual Meeting of Stockholders is incorporated herein by reference to such proxy statement.

We have adopted a written code of business conduct and ethics that applies to our directors, officers and employees, including our principal executive officer, principal financial officer, principal accounting officer or controller, or persons performing similar functions. We make available our code of business conduct and ethics free of charge through our website which is located at www.momentapharma.com. We intend to disclose any amendments to, or waivers from, our code of business conduct and ethics that are required to be publicly disclosed pursuant to rules of the Securities and Exchange Commission and the NASDAQ National Market by filing such amendment or waiver with the Securities and Exchange Commission and by posting it on our website.

Item 11.                  EXECUTIVE COMPENSATION

The discussion under the heading “Executive Compensation” in our definitive proxy statement for the 2006 Annual Meeting of Stockholders is incorporated herein by reference to such proxy statement. The information specified in Item 402(k) and (l) of Regulation S-K and set forth in our definitive proxy statement for the 2005 Annual Meeting of Stockholders is not incorporated by reference.

Item 12.                  SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS AND MANAGEMENT AND RELATED STOCKHOLDER MATTERS

The discussion under the heading “Security Ownership of Certain Beneficial Owners and Management and Related Stockholder Matters” in our definitive proxy statement for the 2006 Annual Meeting of Stockholders is incorporated herein by reference to such proxy statement.

Item 13.                  CERTAIN RELATIONSHIPS AND RELATED TRANSACTIONS

The discussion under the heading “Certain Relationships and Related Transactions” in our definitive proxy statement for the 2006 Annual Meeting of Stockholders is incorporated herein by reference to such proxy statement.

Item 14.                  PRINCIPAL ACCOUNTANT FEES AND SERVICES

The discussion under the heading “Independent Auditors Fees and Other Matters” in our definitive proxy statement for the 2006 Annual Meeting of Stockholders is incorporated herein by reference to such proxy statement.

86




PART IV

Item 15.                  EXHIBITS AND FINANCIAL STATEMENT SCHEDULES

(a)   The following documents are included as part of this Annual Report on Form 10-K.

1.    Financial Statements:

 

2.    All schedules are omitted as the information required is either inapplicable or is presented in the financial statements and/or the related notes.

3.    The Exhibits listed in the Exhibit Index immediately preceding the Exhibits are filed as a part of this Annual Report on Form 10-K.

87




SIGNATURES

Pursuant to the requirements of Section 13 or 15(d) of the Securities Exchange Act of 1934, the registrant has duly caused this report to be signed on its behalf by the undersigned, thereunto duly authorized.

MOMENTA PHARMACEUTICALS, INC.

Date: March 16, 2006

By:

 

/s/  ALAN L. CRANE

 

 

 

Alan L. Crane
Chief Executive Officer

 

Pursuant to the requirements of the Securities Exchange Act of 1934, this report has been signed below by the following persons on behalf of the registrant and in the capacities and on the dates indicated.

Signature

 

 

Title

 

 

Date

 

/s/ ALAN L. CRANE

 

President and Chief Executive Officer;

 

March 16, 2006

Alan L. Crane

 

 Director (Principal Executive Officer)

 

 

/s/ RICHARD P. SHEA

 

Vice President and Chief Financial Officer

 

March 16, 2006

Richard P. Shea

 

(Principal Financial and Accounting Officer)

 

 

/s/ PETER BARRETT

 

Chairman and Director

 

March 16, 2006

Peter Barrett

 

 

 

 

/s/ JOHN K. CLARKE

 

Director

 

March 16, 2006

John K. Clarke

 

 

 

 

/s/ MARSHA H. FANUCCI

 

Director

 

March 16, 2006

Marsha H. Fanucci

 

 

 

 

/s/ PETER BARTON HUTT

 

Director

 

March 16, 2006

Peter Barton Hutt

 

 

 

 

/s/ ROBERT S. LANGER, Jr.

 

Director

 

March 16, 2006

Robert S. Langer, Jr.

 

 

 

 

/s/ STEPHEN T. REEDERS

 

Director

 

March 16, 2006

Stephen T. Reeders

 

 

 

 

/s/ RAM SASISEKHARAN

 

Director

 

March 16, 2006

Ram Sasisekharan

 

 

 

 

/s/ BENNETT M. SHAPIRO

 

Director

 

March 16, 2006

Bennett M. Shapiro

 

 

 

 

/s/ CHRISTOPH H. WESTPHAL

 

Director

 

March 16, 2006

Christoph H. Westphal

 

 

 

 

 

 

88




EXHIBIT INDEX

 

 

 

 

 

 

Incorporated by Reference to

Exhibit
Number

 

Description

 

Form or Schedule

 

Exhibit No.

 

Filing Date
with SEC

 

SEC File
Number

 

 

Articles of Incorporation and By-Laws

 

 

 

 

 

 

 

 

3.1

 

Third Amended and Restated Certificate of Incorporation

 

S-1

 

3.3

 

3/11/2004

 

333-113522

3.2

 

Certificate of Designations of Series A Junior Participating Preferred Stock of the Registrant

 

8-K

 

3.1

 

11/8/2005

 

000-50797

3.3

 

Amended and Restated By-Laws

 

S-1

 

3.2

 

3/11/2004

 

333-113522

 

 

Instruments Defining the Rights of Security Holders

 

 

 

 

 

 

 

 

4.1

 

Specimen Certificate evidencing shares of common stock

 

S-1/A

 

4.1

 

6/15/2004

 

333-113522

4.2

 

Second Amended and Restated Investors’ Rights Agreement, dated as of February 27, 2004, by and among the Purchasers listed therein, the Founders listed therein and the Registrant; Amendment No. 1 to Second Amended and Restated Investors’ Rights Agreement dated June 10, 2004, by and among the Registrant and the Investors set forth therein

 

S-1/A

 

4.3

 

6/15/2004

 

333-113522

4.3

 

Rights Agreement, dated as of November 7, 2005, between American Stock Transfer & Trust Company, as Rights Agent, and the Registrant

 

8-K

 

4.1

 

11/8/2005

 

000-50797

 

 

Material Contracts—License Agreements

 

 

 

 

 

 

 

 

10.1†

 

Collaboration and License Agreement, dated November 1, 2003, by and among Biochemie West Indies, N.V., Geneva Pharmaceuticals, Inc. and the Registrant

 

S-1/A

 

10.4

 

5/11/2004

 

333-113522

10.2†

 

Amended and Restated Exclusive Patent License Agreement, dated November 1, 2002, by and between the Massachusetts Institute of Technology and the Registrant (the “November 1, 2002 M.I.T. License”); First Amendment to the November 1, 2002 M.I.T. License, dated November 15, 2002, by and between the Massachusetts Institute of Technology and the Registrant; Letter Agreement, dated September 12, 2003, between the Massachusetts Institute of Technology and the Registrant; Letter Agreement, dated October 22, 2003, between the Massachusetts Institute of Technology and the Registrant; Second Amendment to the November 1, 2002 M.I.T. License, dated November 19, 2003, by and between the Massachusetts Institute of Technology and the Registrant; Third Amendment to the November 1, 2002 M.I.T. License, dated April 2, 2004, by and between the Massachusetts Institute of Technology and the Registrant

 

S-1/A

 

10.5

 

5/11/2004

 

333-113522

89




 

10.3†

 

Exclusive Patent License Agreement, dated October 31, 2002, by and between the Massachusetts Institute of Technology and the Registrant (the “October 31, 2002 M.I.T. License”); First Amendment to the October 31, 2002 M.I.T. License, dated November 15, 2002, by and between the Massachusetts Institute of Technology and the Registrant

 

S-1/A

 

10.6

 

5/11/2004

 

333-113522

10.4†

 

Fourth Amendment to the Amended and Restated Exclusive Patent License Agreement, dated November 1, 2002, by and between Massachusetts Institute of Technology and the Registrant

 

10-Q

 

10.3

 

8/16/2004

 

000-50797

10.5†

 

Second Amendment to the Exclusive Patent License Agreement, dated October 31, 2002, by and between the Massachusetts Institute of Technology and the Registrant

 

10-Q

 

10.4

 

8/16/2004

 

000-50797

10.6†

 

License Agreement for Installing Novel Functional Groups for Therapeutics, dated November 20 2002, by and between the Regents of the University of California through the Ernest Orlando Lawrence Berkeley National Laboratory and the Registrant

 

S-1/A

 

10.7

 

5/11/2004

 

333-113522

10.7†

 

Letter Agreement, dated November 16, 2004, between the Regents of the University of California through the Ernest Orlando Lawrence Berkley National Laboratory and the Registrant.

 

10-K

 

10.12

 

3/31/2005

 

000-50797

10.8†

 

Letter Agreement, dated February 8, 2005, between the Regents of the University of California through the Ernest Orlando Lawrence Berkley National Laboratory and the Registrant

 

10-K

 

10.13

 

3/31/2005

 

000-50797

 

 

Material Contracts—Management Contracts and Compensation Plans

 

 

 

 

 

 

 

 

10.9#

 

Amended and Restated 2002 Stock Incentive Plan

 

S-1

 

10.1

 

3/11/2004

 

333-113522

*10.10#

 

2004 Stock Incentive Plan, as amended

 

 

 

 

 

 

 

 

10.11#

 

Form of Incentive Stock Option Agreement Granted Under 2004 Stock Incentive Plan

 

10-Q

 

10.1

 

8/16/2004

 

000-50797

10.12#

 

Form of Nonstatutory Stock Option Agreement Granted Under 2004 Stock Incentive Plan

 

10-Q

 

10.2

 

8/16/2004

 

000-50797

10.13#

 

2004 Employee Stock Purchase Plan

 

S-1/A

 

10.3

 

4/16/2004

 

333-113522

*10.14#

 

Executive Officer Compensation Summary

 

 

 

 

 

 

 

 

*10.15#

 

Non-Employee Director Compensation Summary

 

 

 

 

 

 

 

 

10.16#

 

Employment Agreement, dated March 15, 2002, by and between Alan L. Crane and the Registrant

 

S-1

 

10.9

 

3/11/2004

 

333-113522

10.17#

 

Amended No. 1 to Employment Agreement, effective as of June 7, 2005, by and between Alan L. Crane and the Registrant

 

10-Q

 

10.1

 

8/12/2005

 

000-50797

90




 

10.18#

 

Restricted Stock Purchase Agreement, dated June 13, 2001, by and between Alan L. Crane and the Registrant

 

S-1

 

10.10

 

3/11/2004

 

333-113522

10.19#

 

Restricted Stock Purchase Agreement, dated March 15, 2002, by and between Alan L. Crane and the Registrant

 

S-1

 

10.11

 

3/11/2004

 

333-113522

10.20#

 

First Amended and Restated Employment Agreement, dated April 10, 2002, by and between Ganesh Venkataraman and the Registrant

 

S-1

 

10.12

 

3/11/2004

 

333-113522

10.21#

 

Restricted Stock Purchase Agreement, dated June 13, 2001, by and between Ganesh Venkataraman and the Registrant

 

S-1

 

10.13

 

3/11/2004

 

333-113522

10.22#

 

Reallocation of Founder Shares Agreement, dated April 10, 2002, by and among Ganesh Venkataraman, Ram Sasisekharan, Robert S. Langer, Jr., Polaris Venture Partners III, L.P. and the Registrant

 

S-1

 

10.14

 

3/11/2004

 

333-113522

10.23#

 

Employment Agreement, dated April 10, 2002, by and between Susan Whoriskey and the Registrant

 

S-1

 

10.15

 

3/11/2004

 

333-113522

10.24#

 

Restricted Stock Purchase Agreement, dated April 10, 2002, by and between Susan Whoriskey and the Registrant

 

S-1

 

10.16

 

3/11/2004

 

333-113522

10.25#

 

Consulting Agreement, dated July 23, 2001, by and between Robert S. Langer, Jr. and the Registrant; Letter of Extension dated June 23, 2003

 

S-1

 

10.17

 

3/11/2004

 

333-113522

10.26#

 

Letter of Extension to Consulting Agreement, dated July 12, 2004, by and between Robert S. Langer, Jr. and the Registrant

 

10-Q

 

10.2

 

11/12/2004

 

000-50797

10.27#

 

Letter of Extension to Consulting Agreement, dated August 8, 2005, between Robert S. Langer, Jr. and the Registrant

 

8-K

 

10.1

 

8/12/2005

 

000-50797

10.28#

 

Restricted Stock Purchase Agreement, dated June 13, 2001, by and between Robert S. Langer, Jr. and the Registrant

 

S-1

 

10.18

 

3/11/2004

 

333-113522

10.29#

 

Consulting Agreement, dated August 16, 2001, by and between Ram Sasisekharan and the Registrant; Letter of Extension dated August 1, 2003

 

S-1

 

10.19

 

3/11/2004

 

333-113522

10.30#

 

Letter of Extension to Consulting Agreement, dated July 12, 2004, by and between Ram Sasisekharan and the Registrant

 

10-Q

 

10.1

 

11/12/2004

 

000-50797

10.31#

 

Letter of Extension to Consulting Agreement, effective as of November 8, 2005, between Ram Sasisekharan and the Registrant

 

8-K

 

10.1

 

11/10/2005

 

000-50797

10.32#

 

Restricted Stock Purchase Agreement, dated June 13, 2001, by and between Ram Sasisekharan and the Registrant

 

S-1

 

10.20

 

3/11/2004

 

333-113522

91




 

10.33#

 

Letter of Extension to Consulting Agreement, dated March 15, 2005, by and between Ram Sasisekharan and the Registrant

 

10-Q

 

10.1

 

5/13/2005

 

000-50797

10.34#

 

Consulting Agreement, dated September 18, 2002, by and between Peter Barton Hutt and the Registrant; Letter of Extension dated September 29, 2003

 

S-1

 

10.21

 

3/11/2004

 

333-113522

10.35#

 

Amendment to Letter of Extension, dated October 4, 2004, between Peter Barton Hutt and the Registrant

 

10-Q

 

10.3

 

11/12/2004

 

000-50797

10.36#

 

Letter of Extension to Consulting Agreement, dated September 18, 2002, dated September 22, 2005, between Peter Barton Hutt and the Registrant

 

10-Q

 

10.2

 

11/14/2005

 

000-50797

10.37#

 

Restricted Stock Purchase Agreement, dated June 13, 2001, by and between Peter Barton Hutt and the Registrant

 

S-1

 

10.22

 

3/11/2004

 

333-113522

10.38#

 

Industry Consulting Agreement, effective as of October 4, 2004, between Bennett M. Shapiro and the Registrant

 

10-Q

 

10.4

 

11/12/2004

 

000-50797

10.39#

 

Amendment (regarding Consulting Agreement, dated October 4, 2004), dated September 22, 2005, between Bennett M. Shapiro and the Registrant

 

10-Q

 

10.1

 

11/14/2005

 

000-50797

10.40#

 

Letter Agreement, dated November 15, 2004, between Joseph E. Tyler and the Registrant

 

10-K

 

10.47

 

3/31/2005

 

000-50797

 

 

Material Contracts—Credit Agreements

 

 

 

 

 

 

 

 

10.41

 

Loan and Security Agreement, dated December 27, 2002, by and between Silicon Valley Bank and the Registrant

 

S-1

 

10.23

 

3/11/2004

 

333-113522

10.42

 

First Loan Modification Agreement, dated December 28, 2004, between Silicon Valley Bank and the Registrant

 

10-K

 

10.37

 

3/31/2005

 

000-50797

10.43

 

Loan and Security Agreement, dated December 28, 2004, between Silicon Valley Bank and the Registrant

 

10-K

 

10.38

 

3/31/2005

 

000-50797

*10.44  

 

Master Lease Agreement, dated December 30, 2005, between General Electric Capital Corporation and the Registrant

 

 

 

 

 

 

 

 

 

 

Material Contracts—Leases

 

 

 

 

 

 

 

 

10.45†

 

Sublease Agreement, dated September 14, 2004, by and between Vertex Pharmaceuticals Incorporated and the Registrant

 

10-Q

 

10.9

 

11/12/2004

 

000-50797

10.46

 

First Amendment to Sublease (regarding Sublease Agreement, dated September 14, 2004), dated September 7, 2005, between Vertex Pharmaceuticals Incorporated and the Registrant

 

10.Q

 

10.3

 

11/14/2005

 

000-50797

92




 

*10.47

 

Second Amendment to Sublease (regarding Sublease Agreement, dated September 14, 2004, as amended), effective as of November 21, 2005, between Vertex Pharmaceuticals Incorporated and the Registrant

 

 

 

 

 

 

 

 

*10.48

 

Third Amendment to Sublease (regarding Sublease Agreement, dated September 14, 2004, as amended), effective as of January 27, 2006, between Vertex Pharmaceuticals Incorporated and the Registrant

 

 

 

 

 

 

 

 

 

 

Additional Exhibits

 

 

 

 

 

 

 

 

*21

 

List of Subsidiaries

 

 

 

 

 

 

 

 

*23.1

 

Consent of Ernst & Young LLP

 

 

 

 

 

 

 

 

*31.1

 

Certification of Chief Executive Officer pursuant to Exchange Act Rules 13a-14 or 15d-14, as adopted pursuant to Section 302 of Sarbanes-Oxley Act of 2002

 

 

 

 

 

 

 

 

*31.2

 

Certification of Chief Financial Officer pursuant to Exchange Act Rules 13a-14 or 15d-14, as adopted pursuant to Section 302 of Sarbanes-Oxley Act of 2002

 

 

 

 

 

 

 

 

*32.1

 

Certification of Chief Executive Officer pursuant to Exchange Act Rules 13a-14(b) or 15d-14(b) and 18 U.S.C. Section 1350, as adopted pursuant to Section 906 of Sarbanes-Oxley Act of 2002

 

 

 

 

 

 

 

 

*32.2

 

Certification of Chief Financial Officer pursuant to Exchange Act Rules 13a-14(b) or 15d-14(b) and 18 U.S.C. Section 1350, as adopted pursuant to Section 906 of Sarbanes-Oxley Act of 2002

 

 

 

 

 

 

 

 


*                     Filed herewith.

                    Confidential treatment requested as to certain portions, which portions are omitted and filed separately with the Securities and Exchange Commission.

#                  Management contract or compensatory plan or arrangement filed as an Exhibit to this report pursuant to 15(a) and 15(c) of Form 10-K.

93



Exhibit 10.10

 

MOMENTA PHARMACEUTICALS, INC.

 

2004 STOCK INCENTIVE PLAN

 

(as amended May 26, 2005)

 

1.                                        Purpose

 

The purpose of this 2004 Stock Incentive Plan (the “Plan”) of Momenta Pharmaceuticals, Inc., a Delaware corporation (the “Company”), is to advance the interests of the Company’s stockholders by enhancing the Company’s ability to attract, retain and motivate persons who are expected to make important contributions to the Company and by providing such persons with equity ownership opportunities and performance-based incentives that are intended to better align their interests with those of the Company’s stockholders.  Except where the context otherwise requires, the term “Company” shall include any of the Company’s present or future parent or subsidiary corporations as defined in Sections 424(e) or (f) of the Internal Revenue Code of 1986, as amended, and any regulations promulgated thereunder (the “Code”) and any other business venture (including, without limitation, joint venture or limited liability company) in which the Company has a controlling interest, as determined by the Board of Directors of the Company (the “Board”).

 

2.                                        Eligibility

 

All of the Company’s employees, officers, directors, consultants and advisors are eligible to receive options, restricted stock awards, stock appreciation rights and other stock-based awards (each, an “Award”) under the Plan.  Each person who receives an Award under the Plan is deemed a “Participant”.

 

3.                                        Administration and Delegation

 

(a)           Administration by Board of Directors .  The Plan will be administered by the Board.  The Board shall have authority to grant Awards and to adopt, amend and repeal such administrative rules, guidelines and practices relating to the Plan as it shall deem advisable.  The Board may correct any defect, supply any omission or reconcile any inconsistency in the Plan or any Award in the manner and to the extent it shall deem expedient to carry the Plan into effect and it shall be the sole and final judge of such expediency.  All decisions by the Board shall be made in the Board’s sole discretion and shall be final and binding on all persons having or claiming any interest in the Plan or in any Award.  No director or person acting pursuant to the authority delegated by the Board shall be liable for any action or determination relating to or under the Plan made in good faith.

 

(b)          Appointment of Committees .   To the extent permitted by applicable law, the Board may delegate any or all of its powers under the Plan to one or more committees or subcommittees of the Board (a “Committee”).  All references in the Plan to the “Board” shall mean the Board or a Committee of the Board or the officers referred to in Section 3(c) to the

 



 

extent that the Board’s powers or authority under the Plan have been delegated to such Committee or officers.

 

(c)           Delegation to Officers .  To the extent permitted by applicable law, the Board may delegate to one or more officers of the Company the power to grant Awards to employees or officers of the Company or any of its present or future subsidiary corporations and to exercise such other powers under the Plan as the Board may determine, provided that the Board shall fix the terms of the Awards to be granted by such officers (including the exercise price of such Awards, which may include a formula by which the exercise price will be determined) and the maximum number of shares subject to Awards that the officers may grant; provided further, however, that no officer shall be authorized to grant Awards to any “executive officer” of the Company (as defined by Rule 3b-7 under the Securities Exchange Act of 1934, as amended (the “Exchange Act”)) or to any “officer” of the Company (as defined by Rule 16a-1 under the Exchange Act).

 

4.                                        Stock Available for Awards

 

(a)           Number of Shares .  Subject to adjustment under Section 10, Awards may be made under the Plan for up to the number of shares of the Company’s common stock, par value $0.0001 per share (the “Common Stock”), that is equal to the sum of:

 

(1)                                   3,948,785 shares of Common Stock; plus

 

(2)                                   an annual increase to be added on the first day of each of the Company’s fiscal years during the period beginning in fiscal year 2005 and ending on the second day of fiscal year 2013 equal to the lowest of (i) 1,974,393 shares of Common Stock, (ii) 5% of the outstanding shares on such date and (iii) an amount determined by the Board.

 

Notwithstanding clause (2) above, in no event shall the number of shares available under this Plan be increased as set forth in clause (2) to the extent such increase, in addition to any other increases proposed by the Board in the number of shares available for issuance under all other employee or director stock plans, including, without limitation, employee stock purchase plans, would result in the total number of shares then available for issuance under all employee and director stock plans exceeding 25% of the outstanding shares of the Company on the first day of the applicable fiscal year.

 

If any Award expires or is terminated, surrendered or canceled without having been fully exercised or is forfeited in whole or in part (including as the result of shares of Common Stock subject to such Award being repurchased by the Company at the original issuance price pursuant to a contractual repurchase right) or results in any Common Stock not being issued, the unused Common Stock covered by such Award shall again be available for the grant of Awards under the Plan, subject, however, in the case of Incentive Stock Options, to any limitations under the Code.  Shares issued under the Plan may consist in whole or in part of authorized but unissued shares or treasury shares.

 

(b)          Per-Participant Limit .  Subject to adjustment under Section 10, for Awards granted after the Common Stock is registered under the Exchange Act, the maximum number of shares

 

2



 

of Common Stock with respect to which Awards may be granted to any Participant under the Plan shall be 512,000 per calendar year.  The per-Participant limit described in this Section 4(b) shall be construed and applied consistently with Section 162(m) of the Code (“Section 162(m)”).

 

5.                                        Stock Options

 

(a)           General .  The Board may grant options to purchase Common Stock (each, an “Option”) and determine the number of shares of Common Stock to be covered by each Option, the exercise price of each Option and the conditions and limitations applicable to the exercise of each Option, including conditions relating to applicable federal or state securities laws, as it considers necessary or advisable.  An Option which is not intended to be an Incentive Stock Option (as hereinafter defined) shall be designated a “Nonstatutory Stock Option”.

 

(b)          Incentive Stock Options .  An Option that the Board intends to be an “incentive stock option” as defined in Section 422 of the Code (an “Incentive Stock Option”) shall only be granted to employees of Momenta Pharmaceuticals, Inc., any of Momenta Pharmaceutical Inc.’s present or future parent or subsidiary corporations as defined in Sections 424(e) or (f) of the Code, and any other entities the employees of which are eligible to receive Incentive Stock Options under the Code, and shall be subject to and shall be construed consistently with the requirements of Section 422 of the Code.  The Company shall have no liability to a Participant, or any other party, if an Option (or any part thereof) that is intended to be an Incentive Stock Option is not an Incentive Stock Option or for any action taken by the Board pursuant to Section 11(f), including without limitation the conversion of an Incentive Stock Option to a Nonstatutory Stock Option.

 

(c)           Exercise Price .  The Board shall establish the exercise price of each Option and specify such exercise price in the applicable option agreement.

 

(d)          Duration of Options .  Each Option shall be exercisable at such times and subject to such terms and conditions as the Board may specify in the applicable option agreement; provided, however, that no Option will be granted for a term in excess of 10 years.

 

(e)           Exercise of Option .  Options may be exercised by delivery to the Company of a written notice of exercise signed by the proper person or by any other form of notice (including electronic notice) approved by the Board together with payment in full as specified in Section 5(f) for the number of shares for which the Option is exercised.

 

(f)             Payment Upon Exercise.   Common Stock purchased upon the exercise of an Option granted under the Plan shall be paid for as follows:

 

(1)                                   in cash or by check, payable to the order of the Company;

 

(2)                                   except as the Board may otherwise provide in an option agreement, by (i) delivery of an irrevocable and unconditional undertaking by a creditworthy broker to deliver promptly to the Company sufficient funds to pay the exercise price and any required tax withholding or (ii) delivery by the Participant to the Company of a copy of irrevocable and unconditional instructions to a creditworthy broker to deliver promptly to the Company cash or a check sufficient to pay the exercise price and any required tax withholding;

 

3



 

(3)                                   when the Common Stock is registered under the Exchange Act, by delivery of shares of Common Stock owned by the Participant valued at their fair market value as determined by (or in a manner approved by) the Board (“Fair Market Value”), provided (i) such method of payment is then permitted under applicable law, (ii) such Common Stock, if acquired directly from the Company, was owned by the Participant at least six months prior to such delivery and (iii) such Common Stock is not subject to any repurchase, forfeiture, unfulfilled vesting or other similar requirements;

 

(4)                                   to the extent permitted by applicable law and by the Board, by (i) delivery of a promissory note of the Participant to the Company on terms determined by the Board, or (ii) payment of such other lawful consideration as the Board may determine; or

 

(5)                                   by any combination of the above permitted forms of payment.

 

(g)          Substitute Options .  In connection with a merger or consolidation of an entity with the Company or the acquisition by the Company of property or stock of an entity, the Board may grant Options in substitution for any options or other stock or stock-based awards granted by such entity or an affiliate thereof.  Substitute Options may be granted on such terms as the Board deems appropriate in the circumstances, notwithstanding any limitations on Options contained in the other sections of this Section 5 or in Section 2.

 

6.                                        Director Options .

 

(a)           Initial Grant .  Upon the commencement of service on the Board by any individual who is not then an employee of the Company or any subsidiary of the Company, the Company shall grant to such person a Nonstatutory Stock Option to purchase no more than 38,400 shares of Common Stock (subject to adjustment under Section 10).

 

(b)          Annual Grant .  Subject to an annual evaluation, which evaluation shall be overseen by the Corporation’s Nominating and Corporate Governance Committee, on the date of each annual meeting of stockholders of the Company, the Company shall grant to each member of the Board of Directors of the Company who is both serving as a director of the Company immediately prior to and immediately following such annual meeting and who is not then an employee of the Company or any of its subsidiaries, a Nonstatutory Stock Option to purchase no more than 19,200 shares of Common Stock (subject to adjustment under Section 10); provided, however, that a director shall not be eligible to receive an option grant under this Section 6(b) until such director has served on the Board for at least six months.

 

(c)           Terms of Director Options .  Options granted under this Section 6 shall (i) have an exercise price equal to the last reported sale price of the Common Stock on The Nasdaq Stock Market or the national securities exchange on which the Common Stock is then traded on the trading date immediately prior to the date of grant (and if the Common Stock is not then traded on The Nasdaq Stock Market or a national securities exchange, the fair market value of the Common Stock on such date as determined by the Board), (ii) be exercisable at such times as the Board may specify in the applicable option agreement; provided, however, that no option will be granted to a non-employee director for a term in excess of 10 years and (iii) contain such other terms and conditions as the Board shall determine.

 

4



 

7.                                        Stock Appreciation Rights .

 

(a)           Nature of Stock Appreciation Rights . A Stock Appreciation Right, or SAR, is an Award entitling the holder on exercise to receive an amount in cash or Common Stock or a combination thereof (such form to be determined by the Board) determined in whole or in part by reference to appreciation, from and after the date of grant, in the fair market value of a share of Common Stock.  SARs may be based solely on appreciation in the fair market value of Common Stock or on a comparison of such appreciation with some other measure of market growth such as (but not limited to) appreciation in a recognized market index.  The date as of which such appreciation or other measure is determined shall be the exercise date unless another date is specified by the Board in the SAR Award.

 

(b)          Grants .   Stock Appreciation Rights may be granted in tandem with, or independently of, Options granted under the Plan.

 

(1)                                   Rules Applicable to Tandem Awards .   When Stock Appreciation Rights are expressly granted in tandem with Options, (i) the Stock Appreciation Right will be exercisable only at such time or times, and to the extent, that the related Option is exercisable and will be exercisable in accordance with the procedure required for exercise of the related Option; (ii) the Stock Appreciation Right will terminate and no longer be exercisable upon the termination or exercise of the related Option, except that a Stock Appreciation Right granted with respect to less than the full number of shares covered by an Option will not be reduced until the number of shares as to which the related Option has been exercised or has terminated exceeds the number of shares not covered by the Stock Appreciation Right; (iii) the Option will terminate and no longer be exercisable upon the exercise of the related Stock Appreciation Right; and (iv) the Stock Appreciation Right will be transferable only with the related Option.

 

(2)                                   Exercise of Independent Stock Appreciation Rights A Stock Appreciation Right not expressly granted in tandem with an Option will become exercisable at such time or times, and on such conditions, as the Board may specify in the SAR Award.

 

(c)           Exercise .  Any exercise of a Stock Appreciation Right must be in writing, signed by the proper person and delivered or mailed to the Company, accompanied by any other documents required by the Board.

 

8.                                        Restricted Stock .

 

(a)           Grants .  The Board may grant Awards entitling recipients to acquire shares of Common Stock, subject to the right of the Company to repurchase all or part of such shares at their issue price or other stated or formula price (or to require forfeiture of such shares if issued at no cost) from the recipient in the event that conditions specified by the Board in the applicable Award are not satisfied prior to the end of the applicable restriction period or periods established by the Board for such Award (each, a “Restricted Stock Award”).

 

(b)          Terms and Conditions .  The Board shall determine the terms and conditions of a Restricted Stock Award, including the conditions for repurchase (or forfeiture) and the issue price, if any.

 

5



 

(c)           Stock Certificates .  Any stock certificates issued in respect of a Restricted Stock Award shall be registered in the name of the Participant and, unless otherwise determined by the Board, deposited by the Participant, together with a stock power endorsed in blank, with the Company (or its designee).  At the expiration of the applicable restriction periods, the Company (or such designee) shall deliver the certificates no longer subject to such restrictions to the Participant or if the Participant has died, to the beneficiary designated, in a manner determined by the Board, by a Participant to receive amounts due or exercise rights of the Participant in the event of the Participant’s death (the “Designated Beneficiary”).  In the absence of an effective designation by a Participant, “Designated Beneficiary” shall mean the Participant’s estate.

 

(d)          Deferred Delivery of Shares .  The Board may, at the time any Restricted Stock Award is granted, provide that, at the time Common Stock would otherwise be delivered pursuant to the Award, the Participant shall instead receive an instrument evidencing the right to future delivery of Common Stock at such time or times, and on such conditions, as the Board shall specify.  The Board may at any time accelerate the time at which delivery of all or any part of the Common Stock shall take place.

 

9.                                        Other Stock-Based Awards .

 

Other Awards of shares of Common Stock, and other Awards that are valued in whole or in part by reference to, or are otherwise based on, shares of Common Stock or other property, may be granted hereunder to Participants (“Other Stock Unit Awards”), including without limitation Awards entitling recipients to receive shares of Common Stock to be delivered in the future.  Such Other Stock Unit Awards shall also be available as a form of payment in the settlement of other Awards granted under the Plan or as payment in lieu of compensation to which a Participant is otherwise entitled.  Other Stock Unit Awards may be paid in shares of Common Stock or cash, as the Board shall determine.  Subject to the provisions of the Plan, the Board shall determine the conditions of each Other Stock Unit Awards, including any purchase price applicable thereto.  At the time any Award is granted, the Board may provide that, at the time Common Stock would otherwise be delivered pursuant to the Award, the Participant will instead receive an instrument evidencing the Participant’s right to future delivery of the Common Stock.

 

10.                                  Adjustments for Changes in Common Stock and Certain Other Events .

 

(a)           Changes in Capitalization .  In the event of any stock split, reverse stock split, stock dividend, recapitalization, combination of shares, reclassification of shares, spin-off or other similar change in capitalization or event, or any distribution to holders of Common Stock other than an ordinary cash dividend, (i) the number and class of securities available under this Plan, (ii) the per-Participant limit set forth in Section 4(b), (iii) the number and class of securities and exercise price per share of each outstanding Option and each Option issuable under Section 6, (iv) the repurchase price per share subject to each outstanding Restricted Stock Award and (v) the share- and per-share-related provisions of each outstanding Stock Appreciation Right and Other Stock Unit Award, shall be appropriately adjusted by the Company (or substituted Awards may be made, if applicable) to the extent determined by the Board.

 

6



 

(b)          Reorganization Events .

 

(1)                                   Definition .  A “Reorganization Event” shall mean:  (a) any merger or consolidation of the Company with or into another entity as a result of which all of the Common Stock of the Company is converted into or exchanged for the right to receive cash, securities or other property, (b) any exchange of all of the Common Stock of the Company for cash, securities or other property pursuant to a share exchange transaction or (c) any liquidation or dissolution of the Company.

 

(2)                                   Consequences of a Reorganization Event on Awards Other than Restricted Stock Awards .  In connection with a Reorganization Event, the Board shall take any one or more of the following actions as to all or any outstanding Awards on such terms as the Board determines:  (i) provide that Awards shall be assumed, or substantially equivalent Awards shall be substituted, by the acquiring or succeeding corporation (or an affiliate thereof), (ii) upon written notice to a Participant, provide that the Participant’s unexercised Options or other unexercised Awards shall become exercisable in full and will terminate immediately prior to the consummation of such Reorganization Event unless exercised by the Participant within a specified period following the date of such notice, (iii) provide that outstanding Awards shall become realizable or deliverable, or restrictions applicable to an Award shall lapse, in whole or in part prior to or upon such Reorganization Event, (iv) in the event of a Reorganization Event under the terms of which holders of Common Stock will receive upon consummation thereof a cash payment for each share surrendered in the Reorganization Event (the “Acquisition Price”), make or provide for a cash payment to a Participant equal to (A) the Acquisition Price times the number of shares of Common Stock subject to the Participant’s Options or other Awards (to the extent the exercise price does not exceed the Acquisition Price) minus (B) the aggregate exercise price of all such outstanding Options or other Awards, in exchange for the termination of such Options or other Awards, (v) provide that, in connection with a liquidation or dissolution of the Company, Awards shall convert into the right to receive liquidation proceeds (if applicable, net of the exercise price thereof) and (vi) any combination of the foregoing.

 

For purposes of clause (i) above, an Option shall be considered assumed if, following consummation of the Reorganization Event, the Option confers the right to purchase, for each share of Common Stock subject to the Option immediately prior to the consummation of the Reorganization Event, the consideration (whether cash, securities or other property) received as a result of the Reorganization Event by holders of Common Stock for each share of Common Stock held immediately prior to the consummation of the Reorganization Event (and if holders were offered a choice of consideration, the type of consideration chosen by the holders of a majority of the outstanding shares of Common Stock); provided, however, that if the consideration received as a result of the Reorganization Event is not solely common stock of the acquiring or succeeding corporation (or an affiliate thereof), the Company may, with the consent of the acquiring or succeeding corporation, provide for the consideration to be received upon the exercise of Options to consist solely of common stock of the acquiring or succeeding corporation (or an affiliate thereof) equivalent in fair market value to the per share consideration received by holders of outstanding shares of Common Stock as a result of the Reorganization Event.

 

To the extent all or any portion of an Option becomes exercisable solely as a result of clause (ii) above, the Board may provide that upon exercise of such Option the

 

7



 

Participant shall receive shares subject to a right of repurchase by the Company or its successor at the Option exercise price; such repurchase right (x) shall lapse at the same rate as the Option would have become exercisable under its terms and (y) shall not apply to any shares subject to the Option that were exercisable under its terms without regard to clause (ii) above.

 

(3)                                   Consequences of a Reorganization Event on Restricted Stock Awards .  Upon the occurrence of a Reorganization Event other than a liquidation or dissolution of the Company, the repurchase and other rights of the Company under each outstanding Restricted Stock Award shall inure to the benefit of the Company’s successor and shall apply to the cash, securities or other property which the Common Stock was converted into or exchanged for pursuant to such Reorganization Event in the same manner and to the same extent as they applied to the Common Stock subject to such Restricted Stock Award.  Upon the occurrence of a Reorganization Event involving the liquidation or dissolution of the Company, except to the extent specifically provided to the contrary in the instrument evidencing any Restricted Stock Award or any other agreement between a Participant and the Company, all restrictions and conditions on all Restricted Stock Awards then outstanding shall automatically be deemed terminated or satisfied.

 

11.                                  General Provisions Applicable to Awards

 

(a)           Transferability of Awards .  Except as the Board may otherwise determine or provide in an Award, Awards shall not be sold, assigned, transferred, pledged or otherwise encumbered by the person to whom they are granted, either voluntarily or by operation of law, except by will or the laws of descent and distribution or, other than in the case of an Incentive Stock Option, pursuant to a qualified domestic relations order, and, during the life of the Participant, shall be exercisable only by the Participant.  References to a Participant, to the extent relevant in the context, shall include references to authorized transferees.

 

(b)          Documentation .  Each Award shall be evidenced in such form (written, electronic or otherwise) as the Board shall determine.  Each Award may contain terms and conditions in addition to those set forth in the Plan.

 

(c)           Board Discretion .  Except as otherwise provided by the Plan, each Award may be made alone or in addition or in relation to any other Award.  The terms of each Award need not be identical, and the Board need not treat Participants uniformly.

 

(d)          Termination of Status .  The Board shall determine the effect on an Award of the disability, death, retirement, authorized leave of absence or other change in the employment or other status of a Participant and the extent to which, and the period during which, the Participant, or the Participant’s legal representative, conservator, guardian or Designated Beneficiary, may exercise rights under the Award.

 

(e)           Withholding .  Each Participant shall pay to the Company, or make provision satisfactory to the Company for payment of, any taxes required by law to be withheld in connection with an Award to such Participant.  Except as the Board may otherwise provide in an Award, for so long as the Common Stock is registered under the Exchange Act, Participants may satisfy such tax obligations in whole or in part by delivery of shares of Common Stock, including shares retained from the Award creating the tax obligation, valued at their Fair Market Value;

 

8



 

provided, however, that the total tax withholding where stock is being used to satisfy such tax obligations cannot exceed the Company’s minimum statutory withholding obligations (based on minimum statutory withholding rates for federal and state tax purposes, including payroll taxes, that are applicable to such supplemental taxable income).  Shares surrendered to satisfy tax withholding requirements cannot be subject to any repurchase, forfeiture, unfulfilled vesting or other similar requirements.  The Company may, to the extent permitted by law, deduct any such tax obligations from any payment of any kind otherwise due to a Participant.

 

(f)             Amendment of Award .  The Board may amend, modify or terminate any outstanding Award, including but not limited to, substituting therefor another Award of the same or a different type, changing the date of exercise or realization, and converting an Incentive Stock Option to a Nonstatutory Stock Option, provided that the Participant’s consent to such action shall be required unless the Board determines that the action, taking into account any related action, would not materially and adversely affect the Participant.

 

(g)          Conditions on Delivery of Stock .  The Company will not be obligated to deliver any shares of Common Stock pursuant to the Plan or to remove restrictions from shares previously delivered under the Plan until (i) all conditions of the Award have been met or removed to the satisfaction of the Company, (ii) in the opinion of the Company’s counsel, all other legal matters in connection with the issuance and delivery of such shares have been satisfied, including any applicable securities laws and any applicable stock exchange or stock market rules and regulations, and (iii) the Participant has executed and delivered to the Company such representations or agreements as the Company may consider appropriate to satisfy the requirements of any applicable laws, rules or regulations.

 

(h)          Acceleration .  The Board may at any time provide that any Award shall become immediately exercisable in full or in part, free of some or all restrictions or conditions, or otherwise realizable in full or in part, as the case may be.

 

12.                                  Miscellaneous

 

(a)           No Right To Employment or Other Status .  No person shall have any claim or right to be granted an Award, and the grant of an Award shall not be construed as giving a Participant the right to continued employment or any other relationship with the Company.  The Company expressly reserves the right at any time to dismiss or otherwise terminate its relationship with a Participant free from any liability or claim under the Plan, except as expressly provided in the applicable Award.

 

(b)          No Rights As Stockholder .  Subject to the provisions of the applicable Award, no Participant or Designated Beneficiary shall have any rights as a stockholder with respect to any shares of Common Stock to be distributed with respect to an Award until becoming the record holder of such shares.  Notwithstanding the foregoing, in the event the Company effects a split of the Common Stock by means of a stock dividend and the exercise price of and the number of shares subject to such Option are adjusted as of the date of the distribution of the dividend (rather than as of the record date for such dividend), then an optionee who exercises an Option between the record date and the distribution date for such stock dividend shall be entitled to receive, on the distribution date, the stock dividend with respect to the shares of Common Stock acquired

 

9



 

upon such Option exercise, notwithstanding the fact that such shares were not outstanding as of the close of business on the record date for such stock dividend.

 

(c)           Effective Date and Term of Plan .  The Plan shall become effective on the date on which it is adopted by the Board, but no Award may be granted unless and until the Plan has been approved by the Company’s stockholders.  No Awards shall be granted under the Plan after the completion of 10 years from the earlier of (i) the date on which the Plan was adopted by the Board or (ii) the date the Plan was approved by the Company’s stockholders, but Awards previously granted may extend beyond that date.

 

(d)          Amendment of Plan .  The Board may amend, suspend or terminate the Plan or any portion thereof at any time; provided that, to the extent determined by the Board, no amendment requiring stockholder approval under any applicable legal, regulatory or listing requirement shall become effective until such stockholder approval is obtained.  No Award shall be made that is conditioned upon stockholder approval of any amendment to the Plan.

 

(e)           Provisions for Foreign Participants .  The Board may modify Awards or Options granted to Participants who are foreign nationals or employed outside the United States or establish subplans or procedures under the Plan to recognize differences in laws, rules, regulations or customs of such foreign jurisdictions with respect to tax, securities, currency, employee benefit or other matters.

 

(f)             Governing Law .  The provisions of the Plan and all Awards made hereunder shall be governed by and interpreted in accordance with the laws of the State of Delaware, without regard to any applicable conflicts of law.

 

10


 

Exhibit 10.14

 

Executive Officer Compensation Summary

 

The executive officers of Momenta Pharmaceuticals, Inc. (the “Company”) are: (i) Alan L. Crane, President and Chief Executive Officer; (ii) John Bishop, Vice President, Pharmaceutical Sciences and Manufacturing; (iii) Steven B. Brugger, Vice President, Strategic Business Operations; (iv) Richard P. Shea, Vice President, Chief Financial Officer; (v) Ganesh Venkataraman, Senior Vice President, Research; and (vi) Susan K. Whoriskey, Vice President, Licensing and Business Development.

 

The compensation structure for executive officers of the Company consists of three components: (i) base salary, (ii) discretionary cash bonuses and (iii) stock options or other equity-based awards.

 

Employment Agreements With Executive Officers

 

The Company has entered into employment agreements with Alan L. Crane, Ganesh Venkataraman and Susan K. Whoriskey. The annual salary, severance and termination provisions of such agreements are as follows:

 

Alan L. Crane

 

The Company entered into an employment agreement with Mr. Crane, dated March 15, 2002, which was amended on June 7, 2005 in connection with Mr. Crane’s resignation as the Chairman of the Board of Directors of the Company. Pursuant to this agreement, Mr. Crane is to receive an annual base salary of $370,000, subject to annual increases upon review by the Compensation Committee of the Board of Directors (the “Committee”). In connection with the execution of the agreement, the Company paid Mr. Crane a bonus of $106,585 on March 15, 2002.

 

Under Mr. Crane’s agreement, either the Company or Mr. Crane may terminate his employment at any time, subject to continuation of salary payment and benefits for one year if the Company terminates Mr. Crane’s employment without cause or Mr. Crane terminates his employment for good reason. If, however, Mr. Crane commences full-time employment or enters into a consulting arrangement during the period of time for which the Company is providing severance benefits to Mr. Crane, then the Company’s cash severance payments to Mr. Crane will be reduced by the amount of any cash compensation Mr. Crane earns in his new employment or consulting arrangement. In addition, the Company will have no obligation to provide for benefits so long as the quality of the benefits provided by the new employer are equivalent or superior to the benefits provided by the Company.

 

Susan K. Whoriskey

 

The Company entered into an employment agreement with Dr. Whoriskey, dated April 10, 2002. Pursuant to this agreement, Dr. Whoriskey is to receive an annual base salary of $180,000, subject to increases upon review at least once every six months. Under the agreement, either the Company or Dr. Whoriskey may terminate her employment at any time, subject to

 



 

continuation of salary payment and benefits for three months if the Company terminates Dr. Whoriskey’s employment without cause or Dr. Whoriskey terminates her employment for good reason.

 

Ganesh Venkataraman

 

The Company entered into an employment agreement with Dr. Venkataraman, dated June 13, 2001, which was amended and restated on April 10, 2002. Pursuant to this agreement, Dr. Venkataraman is to receive an annual base salary of $205,000, subject to increases upon review at least once every 12 months. Under the agreement, as amended, either the Company or Dr. Venkataraman may terminate his employment at any time, subject to continuation of salary payment and benefits for three months if the Company terminates Dr. Venkataraman’s employment without cause or Dr. Venkataraman terminates his employment for good reason.

 

Compensation Policy

 

The Committee seeks to establish base salaries for each position and level of responsibility that are competitive with those of executive officers at other emerging pharmaceutical companies. Cash and equity bonuses are awarded typically annually to executive officers based on their achievements against a stated list of objectives developed at the beginning of each year by senior management and the Committee. All executive officers are awarded option grants upon joining the Company that are competitive with those at comparable emerging pharmaceutical companies. In addition, the Committee may award additional stock option grants annually and other equity-based awards. When granting stock options and other equity awards, the Committee considers the recommendation of the Company’s Chief Executive Officer and the relative performance and contributions of each executive officer.

 

Executive Officer Compensation for 2006

 

The Committee approved the following compensation, including base salary (effective January 1, 2006) to be paid to the Company’s executive officers:

 

                  Mr. Crane . The Committee approved a $225,000 bonus to be paid in 2006 based on Mr. Crane’s and Company achievements in 2005, and the grant of 200,000 shares of restricted Company common stock (“Common Stock”). Mr. Crane’s annual base salary was increased to $400,000 for 2006 from $370,000 in 2005.

 

                  Mr. Bishop . The Committee approved a $100,139.18 bonus to be paid in 2006 based on Mr. Bishop’s and Company achievements in 2005, and the grant of an additional option to purchase 50,000 shares of Common Stock. The Committee also approved a $25,000 bonus in September 2005 upon its assessment of corporate and individual performances related to the preparation and filing of the Company’s abbreviated new drug application (the “ANDA”). Mr. Bishop’s annual base salary was increased to $230,431.23 for 2006 from $195,000 in 2005.

 

                  Mr. Brugger . The Committee approved a $100,716 bonus to be paid in 2006 based on Mr. Brugger’s and Company achievements in 2005, and the grant of 200,000

 



 

shares of restricted Common Stock. The Committee also approved a $25,000 bonus in September 2005 upon its assessment of corporate and individual performances related to the preparation and filing of the ANDA. Mr. Brugger’s annual base salary was increased to $279,912 for 2006 from $261,600 in 2005.

 

                  Mr. Shea . The Committee approved an aggregate $52,000 bonus to be paid in 2006 based on Mr. Shea’s and Company achievements in 2005, and the grant of an additional option to purchase 18,750 shares of Common Stock. Mr. Shea’s annual base salary was increased to $230,000 for 2006 from $208,000 in 2005.

 

                  Dr. Venkataraman . The Committee approved an aggregate $100,200 bonus to be paid in 2006 based on Dr. Venkataraman’s and Company achievements in 2005, and the grant of 200,000 shares of restricted Common Stock. The Committee also approved a $25,000 bonus in September 2005 upon its assessment of corporate and individual performances related to the preparation and filing of the ANDA. Dr. Venkataraman’s annual base salary was increased to $278,400 for 2006 from 240,000 in 2005.

 

                  Dr. Whoriskey . The Committee approved an aggregate $33,696 bonus to be paid in 2006 based on Dr. Whoriskey’s and Company achievements in 2005, and the grant of an additional option to purchase 18,750 shares of the Common Stock. The Committee also approved a $2,000 bonus in September 2005 upon its assessment of corporate and individual performances related to the preparation and filing of the ANDA. Dr. Whoriskey’s annual base salary was increased to $194,688 for 2006 from $187,200 in 2005.

 

* * * * *

 


Exhibit 10.15

 

Non-Employee Director Compensation Summary

 

Momenta Pharmaceuticals, Inc.’s (the “Company’s”) non-employee directors are currently:  (i) Peter Barrett; (ii) Peter Barton Hutt; (iii) Christoph H. Westphal; (iv) Bennett M. Shapiro; (v) John K. Clarke; (vi) Robert S. Langer, Jr.; (vii) Stephen T. Reeders; (viii) Ram Sasisekharan; and (ix) Marsha H. Fanucci. On March 7, 2006, the Company’s Board of Directors (the “Board”) approved a revised compensation structure for the Company’s non-employee directors as follows:

 

Grant of Options Upon Appointment

 

Each non-employee director appointed after the 2006 annual meeting of stockholders will automatically receive an option to purchase up to 30,000 shares of the Company’s common stock upon appointment to the Board. These options will vest quarterly over the three years following the grant date, subject to such director’s continued service on the Board.

 

Grant of Additional Stock Options

 

In connection with the Nominating and Corporate Governance Committee’s annual evaluation, non-employee directors who served on the Board during fiscal year 2005 and who will continue to serve on the Board during fiscal year 2006 will be granted an option to purchase up to 19,200 shares of the Company’s common stock at the 2006 annual meeting of stockholders. These options will vest quarterly over the year following the grant date, subject to the non-employee director’s continued service on the Board.

 

Payment of Retainer Fee; Reimbursement of Travel and Other Expenses

 

In addition to an option grant, each non-employee director is entitled to receive an annual retainer of $25,000 for his or her service on the Board during 2006. Additional amounts will be paid as follows:

 

Position

 

Additional
Fees

 

 

 

 

 

Non-Employee Chairman of the Board

 

$

25,000

 

Audit Committee Chair

 

$

10,000

 

Audit Committee Members (other than the Chair)

 

$

7,500

 

Compensation Committee, Nominating and Corporate Governance Committee Chairs and Members (no additional fees shall be paid to members serving on both the Compensation and the Nominating and Corporate Governance Committees)

 

$

5,000

 

 

All retainer amounts shall be paid quarterly during fiscal year 2006. Non-employee directors also receive reimbursement for reasonable travel and other expenses in connection with attending Board meetings during 2006.

 


Exhibit 10.44

 

MASTER LEASE AGREEMENT

 

dated as of December 30, 2005   ( “Agreement” )

 

THIS AGREEMENT is between General Electric Capital Corporation (together with its successors and assigns, if any, “Lessor” ) and Momenta Pharmaceuticals, Inc. ( “Lessee” ).  Lessor has an office at 83 Wooster Heights Road, Danbury, CT 06810.  Lessee is a corporation organized and existing under the laws of the state of Delaware.  Lessee’s mailing address and chief place of business is 675 West Kendall Street, Cambridge, MA 02142.  This Agreement contains the general terms that apply to the leasing of Equipment from Lessor to Lessee.  Additional terms that apply to the Equipment (term, rent, options, etc.) shall be contained on a schedule ( “Schedule” ).

 

1.                    LEASING:

 

(a)           Lessor agrees to lease to Lessee, and Lessee agrees to lease from Lessor, the equipment and the property ( “Equipment” ) described in any Schedule signed by both parties.

 

(b)          Lessor is purchasing the Equipment for leasing back to Lessee pursuant to the Lease. if on or before the Last Delivery Date Lessor receives (i) a Schedule for the Equipment, (ii) evidence of insurance which complies with the requirements of Section 9, (iii) such other documents as Lessor may reasonably request, and (iv) if the in-service date for the Equipment is ninety (90) days or less. Notwithstanding anything to the contrary, Lessee may include, in any Schedule for the Equipment, Equipment with invoice dates not to exceed one hundred eighty days prior to the date of the schedule.  Each of the documents required above must be in form and substance satisfactory to Lessor. Lessor hereby appoints Lessee its agent for inspection and acceptance of the Equipment from the Supplier. Once the Schedule is signed, the Lessee may not cancel the Schedule.

 

2.                    TERM, RENT AND PAYMENT:

 

(a)           The rent payable for the Equipment and Lessee’s right to use the Equipment shall begin on the earlier of (i) the date when the Lessee signs the Schedule and accepts the Equipment or (ii) when Lessee has accepted the Equipment under a Certificate of Acceptance ( “Lease Commencement Date” ).  The term of this Agreement shall be the period specified in the applicable Schedule.  The word “term” shall include all basic and any renewal terms.

 

(b)          Lessee shall pay rent to Lessor at its address stated above, except as otherwise directed by Lessor.  Rent payments shall be in the amount set forth in, due as stated in the applicable Schedule, and paid via electronic payment.  If any Advance Rent (as stated in the Schedule) is payable, it shall be due when the Lessee signs the Schedule.  Advance Rent shall be applied to the first rent payment and the balance, if any, to the final rent payment(s) under such Schedule.  In no event shall any Advance Rent or any other rent payments be refunded to Lessee.  If rent is not paid within fifteen (15) days of its due date, Lessee agrees to pay a late charge of five cents ($.05) per dollar on, and in addition to, the amount of such rent but not exceeding the lawful maximum, if any.

 

3.                    RENT ADJUSTMENT:

 

(a)           If, solely as a result of Congressional enactment of any law (including, without limitation, any modification of, or amendment or addition to, the Internal Revenue Code of 1986, as amended, ( “Code” )), the maximum effective corporate income tax rate (exclusive of any minimum tax rate) for calendar-year taxpayers ( “Effective Rate” ) is higher than thirty-five percent (35%) for any year during the lease term, then Lessor shall have the right to increase such rent payments by requiring payment of a single additional sum.  The additional sum shall be equal to the product of (i) the Effective Rate (expressed as a decimal) for such year less .35 (or, in the event that any adjustment has been made hereunder for any previous year, the Effective Rate (expressed as a decimal) used in calculating the next previous adjustment) times (ii) the adjusted Termination Value (defined below), divided by (iii) the difference between the new Effective Rate (expressed as a decimal) and one (1).  The adjusted Termination Value shall be the Termination Value (calculated as of the first rent due in the year for which the adjustment is being made) minus the Tax Benefits that would be allowable under Section 168 of the Code (as of the first day of the year for which such adjustment is being made and all future years of the lease term).  The Termination Values and Tax Benefits are defined on the Schedule.  Lessee shall pay to Lessor the full amount of the additional rent payment on the later of (i) receipt of notice or (ii) the first day of the year for which such adjustment is being made.

 

(b)          Lessee’s obligations under this Section 3 shall survive any expiration or termination of this Agreement.

 



 

4.                    TAXES:

 

(a)           If permitted by law, Lessee shall report and pay promptly all taxes, fees and assessments due, imposed, assessed or levied against any Equipment (or purchase, ownership, delivery, leasing, possession, use or operation thereof), this Agreement (or any rents or receipts hereunder), any Schedule, Lessor or Lessee by any governmental entity or taxing authority during or related to the term of this Agreement, including, without limitation, all license and registration fees, and all sales, use, personal property, excise, gross receipts, franchise, stamp or other taxes, imposts, duties and charges, together with any penalties, fines or interest thereon (collectively “Taxes” ).  Lessee shall have no liability for Taxes imposed by the United States of America or any state or political subdivision thereof which are on or measured by the net income of Lessor except as provided in Sections 3 and 14(c).  Lessee shall promptly reimburse Lessor (on an after tax basis) for any Taxes charged to or assessed against Lessor.  Lessee shall show Lessor as the owner of the Equipment on all tax reports or returns, and send Lessor a copy of each report or return and evidence of Lessee’s payment of Taxes upon request.

 

(b)          Lessee’s obligations, and Lessor’s rights and privileges, contained in this Section 4 shall survive the expiration or other termination of this Agreement.

 

5.                    REPORTS:

 

(a)           If any tax or other lien shall attach to any Equipment, Lessee will notify Lessor in writing, within thirty (30) days after Lessee becomes aware of the tax or lien. The notice shall include the full particulars of the tax or lien and the location of such Equipment on the date of the notice.

 

(b)          Lessee will deliver to Lessor financial statements as follows.  If Lessee is a privately held company, then Lessee agrees to provide monthly financial statements, certified by Lessee’s president or chief financial officer including a balance sheet, statement of operations and cash flow statement within 30 days of each month end and its complete audited annual financial statements, certified by a recognized firm of certified public accountants, within 120 days of fiscal year end or at such time as Lessee’s Board of Directors receives the audit.  If Lessee is a publicly held company, then Lessee agrees to provide Lessor with the url link to reports on Form 10-K and 10-Q that include quarterly unaudited statements and annual audited statements, certified by a recognized firm of certified public accountants, as are provided to the Securities and Exchange Commission (“SEC”).  All such statements are to be prepared using generally accepted accounting principles (“GAAP”) and, if Lessee is a publicly held company, are to be in compliance with SEC requirements.

 

(c)           Lessor may inspect any Equipment during normal business hours after giving Lessee reasonable prior notice and subject to Lessor having previously executed Momenta’s standard confidentiality agreement (i.e. the terms of the confidentiality agreement dated December 21, 2005 between the parties (the “CDA”) shall apply to any such inspection and the term of exchange for information shall be extended from two years to the term of this Agreement)

 

(d)          Lessee will keep the Equipment at the Equipment Location (specified in the applicable Schedule) and will give Lessor prompt written notice of any relocation of Equipment.  If Lessor asks, Lessee will promptly notify Lessor in writing of the location of any Equipment.

 

(e)           If any Equipment is lost or damaged (where the estimated repair costs would exceed the greater of ten percent (10%) of the original Equipment cost or ten thousand and 00/100 dollars ($10,000)), or is otherwise involved in an accident causing personal injury or property damage, Lessee will promptly and fully report the event to Lessor in writing.

 

(f)             Lessee will furnish a certificate of an authorized officer of Lessee stating that he or she has reviewed the activities of Lessee and that, to the best of his or her knowledge, there exists no default or event which with notice or lapse of time (or both) would become such a default within thirty (30)  days after any request by Lessor.

 

(g)          Lessee will promptly notify Lessor of any change in Lessee’s state of incorporation or organization.

 

6.                    DELIVERY, USE AND OPERATION:

 

(a)           All Equipment shall be shipped directly from the Supplier to Lessee.

 

(b)          Lessee agrees that the Equipment will be used by Lessee solely in the conduct of its business and in a manner complying with all applicable laws, regulations and insurance policies.

 

(c)           Lessee will not move any equipment from the location specified on the Schedule, without the prior written consent of Lessor.

 

(d)          Lessee will keep the Equipment free and clear of all liens and encumbrances other than those which result from acts of Lessor.

 

(e)           Lessor shall not disturb Lessee’s quiet enjoyment of the Equipment during the term of the Agreement unless a default has occurred and is continuing under this Agreement.

 



 

7.                    MAINTENANCE:

 

(a)           Lessee will, at its sole expense, maintain each unit of Equipment in good operating order and repair, normal wear and tear excepted.  The Lessee shall also generally maintain the Equipment in accordance with manufacturer’s recommendations such that it remains in good working order.  Lessee shall make all alterations or modifications required to comply with any applicable law, rule or regulation during the term of this Agreement.  If Lessor requests, Lessee shall affix plates, tags or other identifying labels showing ownership thereof by Lessor.  The tags or labels shall be placed in a prominent position on each unit of Equipment.

 

(b)          Lessee will not attach or install anything on any Equipment that will impair the originally intended function or use of such Equipment without the prior written consent of Lessor.  All additions,  parts, supplies, accessories, and equipment ( “Additions” ) furnished or attached to any Equipment that are not readily removable shall become the property of Lessor.  All Additions shall be made only in compliance with applicable law.  Lessee will not attach or install any Equipment to or in any other personal or real property without the prior written consent of Lessor.

 

8.                    STIPULATED LOSS VALUE:   If for any reason any unit of Equipment becomes worn out, lost, stolen, destroyed, irreparably damaged or unusable ( “Casualty Occurrences” ) Lessee shall promptly and fully notify Lessor in writing.  Lessee shall pay Lessor the sum of (i) the Stipulated Loss Value (see Schedule) of the affected unit determined as of the rent payment date prior to the Casualty Occurrence; and (ii) all rent and other amounts which are then due under this Agreement on the Payment Date (defined below) for the affected unit.  The Payment Date shall be the next rent payment date after the Casualty Occurrence. Upon Payment of all sums due hereunder, the term of this lease as to such unit shall terminate.

 

9.                    INSURANCE:

 

(a)           Lessee shall bear the entire risk of any loss, theft, damage to, or destruction of, any unit of Equipment from any cause whatsoever from the time the Equipment is shipped to Lessee.

 

(b)          Lessee agrees, at its own expense, to keep all Equipment insured for such amounts and against such hazards as Lessor may reasonably require. All such policies shall be with companies, and on terms, reasonably satisfactory to Lessor.  The insurance shall include coverage for damage to or loss of the Equipment, liability for personal injuries, death or property damage.  Lessor shall be named as additional insured with a loss payable clause in favor of Lessor, as its interest may appear, irrespective of any breach of warranty or other act or omission of Lessee.  The insurance shall provide for liability coverage in an amount equal to at least TWO MILLION U.S. DOLLARS ($2,000,000.00) total liability per occurrence, unless otherwise stated in any Schedule.  The casualty/property damage coverage shall be in an amount equal to the higher of the Stipulated Loss Value or the full replacement cost of the Equipment.  No insurance shall be subject to any co-insurance clause. The insurance policies shall provide that the insurance may not be altered or canceled by the insurer until after ten (10) days written notice to Lessor.  Lessee agrees to deliver to Lessor evidence of insurance reasonably satisfactory to Lessor.

 

(c)           If Lessee is unavailable after reasonable notice and uses commercially reasonable efforts to engage Lessee, Lessee hereby appoints Lessor as Lessee’s attorney-in-fact to make proof of loss and claim for insurance, and to make adjustments with insurers and to receive payment of and execute or endorse all documents, checks or drafts in connection with insurance payments. Lessor shall not act as Lessee’s attorney-in-fact unless Lessee is in default.  Lessee shall pay any reasonable expenses of Lessor in adjusting or collecting insurance.  Lessee will not make adjustments with insurers except with respect to claims for damage to any unit of Equipment where the repair costs are less than the lesser of ten percent (10%) of the original Equipment cost or ten thousand and 00/100 dollars ($10,000).  Lessor may, at its option, apply proceeds of insurance, in whole or in part, to (i) repair or replace Equipment or any portion thereof, or (ii) satisfy any obligation of Lessee to Lessor under this Agreement.

 

10.             RETURN OF EQUIPMENT:

 

(a)           At the expiration or termination of this Agreement or any Schedule, Lessee shall perform any testing and repairs required to place the units of Equipment in the same condition and appearance as when received by Lessee (reasonable wear and tear excepted) and in good working order for the original intended purpose of the Equipment.  If required the units of Equipment shall be deinstalled, disassembled and crated by an authorized manufacturer’s representative or such other service person as is reasonably satisfactory to Lessor.  Lessee shall remove installed markings that are not necessary for the operation, maintenance or repair of the Equipment.  All Equipment will be cleaned, sterilized, if necessary, cosmetically acceptable, and in such condition as to be immediately installed into use in a similar environment for which the Equipment was originally intended to be used.  All waste material and fluid must be removed from the Equipment and disposed of in accordance with then current waste disposal laws.  Lessee shall return the units of Equipment to a location within the continental United States as Lessor shall direct.  Lessee shall obtain and pay for a policy of transit insurance for the redelivery period in an amount equal to the replacement value of the Equipment.  The transit insurance must name Lessor as the loss payee.  The Lessee shall pay for all costs to comply with this section (a).

 

(b)          Until Lessee has fully complied with the requirements of Section 10(a) above, Lessee’s rent payment obligation and all other obligations under this Agreement shall continue from month to month notwithstanding any expiration or termination of the lease term. Lessor may terminate the Lessee’s right to use the Equipment upon ten (10) days notice to Lessee if Lessee is in material default of the Agreement and subject to provision of Section Eleven (11) herein.

 

(c)           Lessee shall provide to Lessor a detailed inventory of all components of the Equipment including model and serial numbers.  Lessee shall also provide an up-to-date copy of all other documentation pertaining to the Equipment.  All service manuals, blue prints, process flow diagrams, operating manuals, inventory and maintenance records shall be given to Lessor at least ninety (90) days and not more than one hundred twenty (120) days prior to lease termination.

 



 

11.             DEFAULT AND REMEDIES:

 

(a)           Lessor may in writing declare this Agreement in default if: (i) Lessee breaches its obligation to pay rent or any other sum when due and fails to cure the breach within fifteen (15) days; (ii) Lessee breaches any of its insurance obligations under Section 9; (iii) Lessee breaches any of its other material obligations and fails to cure that breach within thirty (30) days after written notice from Lessor; (iv) any representation or warranty made by Lessee in connection with this Agreement shall be false or misleading in any material respect; (v) Lessee or any guarantor or other obligor for the Lessee’s obligations hereunder ( “Guarantor” ) becomes insolvent or ceases to do business as a going concern; (vi) any Equipment is illegally used; (vii) if Lessee or any Guarantor is a natural person, any death or incompetency of Lessee or such Guarantor; (viii) a petition is filed by or against Lessee or any Guarantor under any bankruptcy or insolvency laws and in the event of an involuntary petition, the petition is not dismissed within forty-five (45) days of the filing date; (ix) Lessee defaults under any other material obligation for (A) borrowed money, (B) the deferred purchase price of property, or (C) payments due under lease agreements; (x) there is a merger, consolidation or acquisition of Lessee by a credit reasonably deemed inferior to Lessee’s credit, or (xi) there is a material adverse change in the Lessee’s financial condition as determined solely by the Lessor.  The default declaration shall apply to all Schedules unless specifically excepted by Lessor.

 

(b)          After a default, at the request of Lessor, Lessee shall comply with the provisions of Section 10(a).  Lessee hereby authorizes Lessor to upon reasonable notice peacefully enter any premises where any Equipment may be and after providing Lessor with reasonable opportunity to remove any proprietary data or materials contained in or on the Equipment, take possession of the Equipment.  Lessee shall immediately pay to Lessor without further demand as liquidated damages for loss of a bargain and not as a penalty, the Stipulated Loss Value of the Equipment (calculated as of the rent payment date prior to the declaration of default), and all rents and other sums then due under this Agreement and all Schedules.  Lessor may terminate this Agreement as to any or all of the Equipment.  A termination shall occur only upon written notice by Lessor to Lessee and only as to the units of Equipment specified in any such notice.  Lessor may, but shall not be required to, sell Equipment at private or public sale, in bulk or in parcels, with or without notice, and without having the Equipment present at the place of sale.  Lessor may also, but shall not be required to, lease, otherwise dispose of or keep idle all or part of the Equipment.  The proceeds of sale, lease or other disposition, if any, shall be applied in the following order of priorities:  (i) to pay all of Lessor’s costs, charges and expenses incurred in taking, removing, holding, repairing and selling, leasing or otherwise disposing of Equipment; then, (ii) to the extent not previously paid by Lessee, to pay Lessor all sums due from Lessee under this Agreement; then (iii) to reimburse to Lessee any sums previously paid by Lessee as liquidated damages; and (iv) any surplus shall be retained by Lessor.  Lessee shall immediately pay any deficiency in (i) and (ii) above.

 

(c)           The foregoing remedies are cumulative, and any or all thereof may be exercised instead of or in addition to each other or any remedies at law, in equity, or under statute.  Lessee waives notice of sale or other disposition (and the time and place thereof), and the manner and place of any advertising.  Lessee shall pay Lessor’s actual attorney’s fees incurred in connection with the enforcement, assertion, defense or preservation of Lessor’s rights and remedies under this Agreement, or if prohibited by law, such lesser sum as may be permitted.  Waiver of any default shall not be a waiver of any other or subsequent default.

 

12.             ASSIGNMENT:   LESSEE SHALL NOT SELL, TRANSFER, ASSIGN, ENCUMBER OR SUBLET ANY EQUIPMENT OR THE INTEREST OF LESSEE IN THE EQUIPMENT WITHOUT THE PRIOR WRITTEN CONSENT OF LESSOR EXCEPT TO AN AFFILIATE OR ENTITY ACQUIRING ALL OR A SUBSTANTIAL PORTION OF LESSEE’S BUSINESS TO WHICH THE AGREEMENT RELATES. Lessor may, without the consent of Lessee, assign this Agreement, any Schedule or the right to enter into a Schedule.  Lessee agrees that if Lessee receives written notice of an assignment from Lessor, Lessee will pay all rent and all other amounts payable under any assigned Schedule to such assignee or as instructed by Lessor.  Lessee also agrees to confirm in writing receipt of the notice of assignment as may be reasonably requested by assignee.  Lessee hereby waives and agrees not to assert against any such assignee any defense, set off, recoupment claim or counterclaim which Lessee has or may at any time have against Lessor for any reason whatsoever; provided that the foregoing waiver does not apply to or limit in any way any rights or remedies that Lessee may have against Lessor.

 

13.             NET LEASE:   Lessee is unconditionally obligated to pay all rent and other amounts due for the entire lease term no matter what happens, even if the Equipment is damaged or destroyed, if it is defective or if Lessee no longer can use it.  Lessee is not entitled to reduce or set-off against rent or other amounts due to Lessor or to anyone to whom Lessor assigns this Agreement or any Schedule whether Lessee’s claim arises out of this Agreement, any Schedule, any statement by Lessor, Lessor’s liability or any manufacturer’s liability, strict liability, negligence or otherwise, unless Lessee’s claim arises from Lessor’s negligence or willful misconduct.

 

14.             INDEMNIFICATION:

 

(a)           Lessee hereby agrees to indemnify Lessor, its agents, employees, successors and assigns (on an after tax basis) from and against any and all losses, damages, penalties, injuries, claims, actions and suits, including legal expenses, of whatsoever kind and nature arising out of or relating to the Equipment or this Agreement, except to the extent the losses, damages, penalties, injuries, claims, actions, suits or expenses result from Lessor’s negligence or willful misconduct ( “Claims” ).  This indemnity shall include, but is not limited to, Lessor’s strict liability in tort and Claims, arising out of the selection, manufacture, purchase, acceptance or rejection of Equipment, the ownership of Equipment during the term of this Agreement, and the delivery, lease, possession, maintenance, uses, condition, return or operation of Equipment (including, without limitation, latent and other defects, whether or not discoverable by Lessor or Lessee and any claim for patent, trademark or copyright infringement or environmental damage).  Lessee shall, upon request, defend any actions based on, or arising out of, any of the foregoing.

 



 

(b)          Lessee hereby represents, warrants and covenants that at no time during the term of this Agreement will Lessee take or omit to take, nor will it permit any sublessee or assignee to take or omit to take, any action (whether or not such act or omission is otherwise permitted by Lessor or by this Agreement), which will result in the disqualification of any Equipment for, or recapture of, all or any portion of such items of deduction and credit specified in Section C of the applicable Schedule (“Tax Benefits”).

 

(c)           If as a result of a breach of any representation, warranty or covenant of the Lessee contained in this Agreement or any Schedule (i) tax counsel of Lessor mutually agreed upon by Lessor and Lessee, such agreement, not to be unreasonably withheld by Lessee, shall determine that Lessor is not entitled to claim on its Federal income tax return all or any portion of the Tax Benefits with respect to any Equipment, or (ii) any Tax Benefit claimed on the Federal income tax return of Lessor is disallowed or adjusted by the Internal Revenue Service, or (iii) any Tax Benefit is recalculated or recaptured (any determination, disallowance, adjustment, recalculation or recapture being a “Loss” ), then Lessee shall pay to Lessor, as an indemnity and as additional rent, an amount that shall, in the reasonable opinion of Lessor, cause Lessor’s after-tax economic yields and cash flows to equal the Net Economic Return that would have been realized by Lessor if such Loss had not occurred.  Such amount shall be payable upon demand accompanied by a statement describing in reasonable detail such Loss and the computation of such amount.  The economic yields and cash flows shall be computed on the same assumptions, including tax rates as were used by Lessor in originally evaluating the transaction ( “Net Economic Return” ).  If an adjustment has been made under Section 3 then the Effective Rate used in the next preceding adjustment shall be substituted.

 

(d)          All references to Lessor in this Section 14 include Lessor and the consolidated taxpayer group of which Lessor is a member. All of Lessor’s rights, privileges and indemnities contained in this Section 14 shall survive the expiration or other termination of this Agreement.  The rights, privileges and indemnities contained herein are expressly made for the benefit of, and shall be enforceable by Lessor, its successors and assigns.

 

15.             DISCLAIMER:   LESSEE ACKNOWLEDGES THAT IT HAS SELECTED THE EQUIPMENT WITHOUT ANY ASSISTANCE FROM LESSOR, ITS AGENTS OR EMPLOYEES.  LESSOR DOES NOT MAKE, HAS NOT MADE, NOR SHALL BE DEEMED TO MAKE OR HAVE MADE, ANY WARRANTY OR REPRESENTATION, EITHER EXPRESS OR IMPLIED, WRITTEN OR ORAL, WITH RESPECT TO THE EQUIPMENT LEASED UNDER THIS AGREEMENT OR ANY COMPONENT THEREOF, INCLUDING, WITHOUT LIMITATION, ANY WARRANTY AS TO DESIGN, COMPLIANCE WITH SPECIFICATIONS, QUALITY OF MATERIALS OR WORKMANSHIP, MERCHANTABILITY, FITNESS FOR ANY PURPOSE, USE OR OPERATION, SAFETY, PATENT, TRADEMARK OR COPYRIGHT INFRINGEMENT, OR TITLE.  All such risks, as between Lessor and Lessee, are to be borne by Lessee.  Without limiting the foregoing, Lessor shall have no responsibility or liability to Lessee or any other person with respect to any of the following; (i) any liability, loss or damage caused or alleged to be caused directly or indirectly by any Equipment, any inadequacy thereof, any deficiency or defect (latent or otherwise) of the Equipment, or any other circumstance in connection with the Equipment; (ii) the use, operation or performance of any Equipment or any risks relating to it; (iii) any interruption of service, loss of business or anticipated profits or consequential damages; or (iv) the delivery, operation, servicing, maintenance, repair, improvement or replacement of any Equipment.  If, and so long as, no default exists under this Agreement, Lessee shall be, and hereby is, authorized during the term of this Agreement to assert and enforce whatever claims and rights Lessor may have against any Supplier of the Equipment at Lessee’s sole cost and expense,  in the name of and for the account of Lessor and/or Lessee, as their interests may appear.

 

16.             REPRESENTATIONS AND WARRANTIES OF LESSEE:   Lessee makes each of the following representations and warranties to Lessor on the date hereof and on the date of execution of each Schedule.

 

(a)           Lessee has adequate power and capacity to enter into, and perform under, this Agreement and all related documents (together, the “Documents” ).  Lessee is duly qualified to do business wherever necessary to carry on its present business and operations, including the jurisdiction(s) where the Equipment is or is to be located.

 

(b)          The Documents have been duly authorized, executed and delivered by Lessee and constitute valid, legal and binding agreements, enforceable in accordance with their terms, except to the extent that the enforcement of remedies may be limited under applicable bankruptcy and insolvency laws.

 

(c)           No approval, consent or withholding of objections is required from any governmental authority or entity with respect to the entry into or performance by Lessee of the Documents except such as have already been obtained.

 

(d)          The entry into and performance by Lessee of the Documents will not: (i) violate any judgment, order, law or regulation applicable to Lessee or any provision of Lessee’s Certificate of Incorporation or bylaws; or (ii) result in any breach of, constitute a default under or result in the creation of any lien, charge, security interest or other encumbrance upon any Equipment pursuant to any indenture, mortgage, deed of trust, bank loan or credit agreement or other instrument (other than this Agreement) to which Lessee is a party.

 

(e)           There are no suits or proceedings pending or threatened in court or before any commission, board or other administrative agency against or affecting Lessee, which if decided against Lessee will have a material adverse effect on the ability of Lessee to fulfill its obligations under this Agreement.

 

(f)             The Equipment accepted under any Certificate of Acceptance is and will remain tangible personal property.

 



 

(g)          Each financial statement delivered to Lessor has been prepared in accordance with generally accepted accounting principles consistently applied.  Since the date of the most recent financial statement, there has been no material adverse change.

 

(h)          Lessee’s exact legal name is as set forth in the first sentence of this Agreement and Lessee is and will be at all times validly existing and in good standing under the laws of the State of its incorporation or organization (specified in the first sentence of this Agreement).

 

(i)              The Equipment will at all times be used for commercial or business purposes.

 

(j)              Lessee is and will remain in full compliance with all laws and regulations applicable to it including, without limitation, (i) ensuring that no person who owns a controlling interest in or otherwise controls Lessee is or shall be (Y) listed on the Specially Designated Nationals and Blocked Person List maintained by the Office of Foreign Assets Control (“ OFAC ”), Department of the Treasury, and/or any other similar lists maintained by OFAC pursuant to any authorizing statute, Executive Order or regulation or (Z) a person designated under Section 1(b), (c) or (d) of Executive Order No. 13224 (September 23, 2001), any related enabling legislation or any other similar Executive Orders, and (ii) compliance with all applicable Bank Secrecy Act (“ BSA ”) laws, regulations and government guidance on BSA compliance and on the prevention and detection of money laundering violations.

 

17.             EARLY TERMINATION:

 

(a)           On or after the First Termination Date (specified in the applicable Schedule), Lessee may, so long as no default exists hereunder, terminate this Agreement as to all (but not less than all) of the Equipment on such Schedule as of a rent payment date ( “Termination Date” ).  Lessee must give Lessor at least forty- five (45) days prior written notice of the termination.

 

(b)          Lessee shall, and Lessor may, solicit cash bids for the Equipment on an AS IS, WHERE IS BASIS without recourse to or warranty from Lessor, express or implied ( “AS IS BASIS” ).  Prior to the Termination Date, Lessee shall (i) certify to Lessor any bids received by Lessee and (ii) pay to Lessor (A) the Termination Value (calculated as of the rent due on the Termination Date) for the Equipment, and (B) all rent and other sums due and unpaid as of the Termination Date.

 

(c)           If all amounts due hereunder have been paid on the Termination Date, Lessor shall (i) sell the Equipment on an AS IS BASIS for cash to the highest bidder and (ii) refund the proceeds of such sale (net of any related expenses) to Lessee up to the amount of the Termination Value.  If such sale is not consummated, no termination shall occur and Lessor shall refund the Termination Value (less any expenses incurred by Lessor) to Lessee.

 

(d)          Notwithstanding the foregoing, Lessor may elect by written notice, at any time prior to the Termination Date, not to sell the Equipment.  In that event, on the Termination Date Lessee shall (i) return the Equipment (in accordance with Section 10) and (ii) pay to Lessor all amounts required under Section 17(b) less the amount of the highest bid certified by Lessee to Lessor.

 

18.             PURCHASE OPTION:

 

(a)           Lessee may at lease expiration or at the Early Lease Term Option, purchase all (but not less than all) of the Equipment in any Schedule on an AS IS BASIS for cash equal to its then Fair Market Value (plus all applicable sales taxes).  Lessee must notify Lessor of its intent to purchase the Equipment in writing at least sixty (60) days in advance.  If Lessee is in default or if the Lease has already been terminated Lessee may not purchase the Equipment.

 

(b)          “Fair Market Value” shall mean the price that a willing buyer (who is neither a lessee in possession nor a used equipment dealer) would pay for the Equipment in an arm’s-length transaction to a willing seller under no compulsion to sell.  In determining the Fair Market Value the Equipment shall be assumed to be in the condition in which it is required to be maintained and returned under this Agreement.  If the Equipment is installed it shall be valued on an installed basis.  The costs of removal from current location shall not be a deduction from the value of the Equipment.  If Lessor and Lessee are unable to agree on the Fair Market Value at least sixty (60) days before lease expiration, Lessor shall appoint an independent appraiser (reasonably acceptable to Lessee) to determine Fair Market Value.  The independent appraiser’s determination shall be final, binding and conclusive.  Lessee shall bear all costs associated with any such appraisal.

 

(c)           Lessee shall be deemed to have waived this option unless it provides Lessor with written notice of its irrevocable election to exercise the same within thirty (30) days after Fair Market Value is told to Lessee.

 

19.             FAIR MARKET VALUE RENTAL RENEWAL:

 

(a)           So long as no default exists hereunder and the Lease has not been earlier terminated, Lessee may at lease expiration, upon at least 60 days prior written notice to Lessor, extend the term of the Lease with respect to all (but not less than all) of the Equipment in any Schedule for a period of twelve (12) months (the “Renewal Period”) for a scheduled monthly rental equal to the monthly Fair Market Rental Value thereof determined as of the end of the pre-extension Lease term.

 

(b)          “Fair Market Rental Value” shall mean the price which a willing lessee would pay for the rental of the Equipment in an arms-length transaction to a willing lessor under no compulsion to lease for a time period similar to the Renewal Period; provided, however, that in such determination:  (i) the Equipment shall be assumed to be in the condition in which it is required to be maintained and returned under this Lease (ii) in the case of any installed additions to the Equipment,

 



 

same shall be valued on an installed basis; and (iii) costs of removal of the Equipment from the current location shall not be a deduction from such valuation.  If Lessor and Lessee are unable to agree on the Fair Market Rental Value at least 60 days before Lease expiration, Lessor shall appoint an independent appraiser (reasonably acceptable to Lessee) to determine Fair Market Rental Value, and that determination shall be final, binding and conclusive.  Lessee shall bear all costs associated with any such appraisal.

 

(c)           Lessee shall be deemed to have waived this option unless it provides Lessor with written notice of its irrevocable election to exercise the same within 15 days after Fair Market Rental Value is determined (by agreement or appraisal).

 

20.             MISCELLANEOUS:

 

(a)           LESSEE AND LESSOR UNCONDITIONALLY WAIVE THEIR RIGHTS TO A JURY TRIAL OF ANY CLAIM OR CAUSE OF ACTION BASED UPON OR ARISING OUT OF THIS AGREEMENT, ANY OF THE RELATED DOCUMENTS, ANY DEALINGS BETWEEN LESSEE AND LESSOR RELATING TO THE SUBJECT MATTER OF THIS TRANSACTION OR ANY RELATED TRANSACTIONS, AND/OR THE RELATIONSHIP THAT IS BEING ESTABLISHED BETWEEN LESSEE AND LESSOR.  THE SCOPE OF THIS WAIVER IS INTENDED TO BE ALL ENCOMPASSING OF ANY AND ALL DISPUTES THAT MAY BE FILED IN ANY COURT.  THIS WAIVER IS IRREVOCABLE.  THIS WAIVER MAY NOT BE MODIFIED EITHER ORALLY OR IN WRITING.  THE WAIVER ALSO SHALL APPLY TO ANY SUBSEQUENT AMENDMENTS, RENEWALS, SUPPLEMENTS OR MODIFICATIONS TO THIS AGREEMENT, ANY RELATED DOCUMENTS, OR TO ANY OTHER DOCUMENTS OR AGREEMENTS RELATING TO THIS TRANSACTION OR ANY RELATED TRANSACTION.  THIS AGREEMENT MAY BE FILED AS A WRITTEN CONSENT TO A TRIAL BY THE COURT.

 

(b)          The Equipment shall remain Lessor’s property unless Lessee purchases the Equipment from Lessor and until such time Lessee shall only have the right to use the Equipment as a lessee.  Any cancellation or termination by Lessor of this Agreement, any Schedule, supplement or amendment hereto, or the lease of any Equipment hereunder shall not release Lessee from any then outstanding obligations to Lessor hereunder except in event of default due to Lessors’s negligence or willful misconduct.  All Equipment shall at all times remain personal property of Lessor even though it may be attached to real property.  The Equipment shall not become part of any other property by reason of any installation in, or attachment to, other real or personal property .

 

(c)           Time is of the essence of this Agreement.  Lessor’s failure at any time to require strict performance by Lessee of any of the provisions hereof shall not waive or diminish Lessor’s right at any other time to demand strict compliance with this Agreement.  Lessee agrees, upon Lessor’s request, to execute, or otherwise authenticate, any document, record or instrument necessary or expedient for filing, recording or perfecting the interest of Lessor or to carry out the intent of this Agreement.  In addition, Lessee hereby authorizes Lessor to file a financing statement and amendments thereto describing the Equipment described in any and all Schedules now and hereafter executed pursuant hereto and adding any other collateral described therein and containing any other information required by the applicable Uniform Commercial Code.  Lessee irrevocably grants to Lessor the power to sign Lessee’s name and generally to act on behalf of Lessee to execute and file financing statements and other documents pertaining to any or all of the Equipment.  Lessee hereby ratifies its prior authorization for Lessor to file financing statements and amendments thereto describing the Equipment and containing any other information required by any applicable law (including without limitation the Uniform Commercial Code) if filed prior to the date hereof.  All notices required to be given hereunder shall be deemed adequately given if sent by registered or certified mail to the addressee at its address stated herein, or at such other place as such addressee may have specified in writing.  This Agreement and any Schedule and Annexes thereto constitute the entire agreement of the parties with respect to the subject matter hereof.  NO VARIATION OR MODIFICATION OF THIS AGREEMENT OR ANY WAIVER OF ANY OF ITS PROVISIONS OR CONDITIONS, SHALL BE VALID UNLESS IN WRITING AND SIGNED BY AN AUTHORIZED REPRESENTATIVE OF THE PARTIES HERETO.

 

(d)          If Lessee does not comply with any provision of this Agreement, Lessor shall have the right, but shall not be obligated, to effect such compliance, in whole or in part.  All reasonable amounts spent and obligations incurred or assumed by Lessor in effecting such compliance shall constitute additional rent due to Lessor.  Lessee shall pay the additional rent within five days after the date Lessor sends notice to Lessee requesting payment.  Lessor’s effecting such compliance shall not be a waiver of Lessee’s default

 

(e)           Any rent or other amount not paid to Lessor when due shall bear interest, from the due date until paid, at the lesser of eighteen percent (18%) per annum or the maximum rate allowed by law.  Any provisions in this Agreement and any Schedule that are in conflict with any statute, law or applicable rule shall be deemed omitted, modified or altered to conform thereto.   Notwithstanding anything to the contrary contained in this Agreement or any Schedule, in no event shall this Agreement or any Schedule require the payment or permit the collection of amounts in excess of the maximum permitted by applicable law.

 

(f)             Lessee hereby irrevocably authorizes Lessor to adjust the Capitalized Lessor’s Cost up or down by no more than five percent (5%) within each Schedule to account for equipment change orders, equipment returns, invoicing errors, and similar matters.  Lessee acknowledges and agrees that the rent shall be adjusted as a result of the change in the Capitalized Lessor’s Cost.  Lessor shall send Lessee a written notice stating the final Capitalized Lessor’s Cost, if it has changed.

 

(g)          THIS AGREEMENT AND THE RIGHTS AND OBLIGATIONS OF THE PARTIES HEREUNDER SHALL IN ALL RESPECTS BE GOVERNED BY AND CONSTRUED IN ACCORDANCE WITH, THE INTERNAL LAWS OF THE STATE OF DELAWARE (WITHOUT REGARD TO THE CONFLICT OF LAWS PRINCIPLES OF SUCH STATE), INCLUDING ALL MATTERS OF CONSTRUCTION, VALIDITY AND PERFORMANCE, REGARDLESS OF THE LOCATION OF THE EQUIPMENT.

 



 

(h)          Any cancellation or termination by Lessor, pursuant to the provisions of this Agreement, any Schedule, supplement or amendment hereto, of the lease of any Equipment hereunder, shall not release Lessee from any then outstanding obligations to Lessor hereunder.

 

(i)              To the extent that any Schedule would constitute chattel paper, as such term is defined in the Uniform Commercial Code as in effect in any applicable jurisdiction, no security interest therein may be created through the transfer or possession of this Agreement in and of itself without the transfer or possession of the original of a Schedule executed pursuant to this Agreement and incorporating this Agreement by reference; and no security interest in this Agreement and a Schedule may be created by the transfer or possession of any counterpart of the Schedule other than the original thereof, which shall be identified as the document marked “Original” and all other counterparts shall be marked “Duplicate”.

 

(j)              Each party hereto agrees to keep confidential, the terms and provisions of the Documents and the transactions contemplated hereby and thereby (collectively, the “ Transactions” ).  Notwithstanding the foregoing, the obligations of confidentiality contained herein, as they relate to the Transactions, shall not apply to the federal tax structure or federal tax treatment of the Transactions, and each party hereto (and any employee, representative, or agent of any party hereto) may disclose to any and all persons, without limitation of any kind, the federal tax structure and federal tax treatment of the Transactions.  The preceding sentence is intended to cause each Transaction to be treated as not having been offered under conditions of confidentiality for purposes of Section 1.6011-4(b)(3) (or any successor provision) of the Treasury Regulations promulgated under Section 6011 of the Internal Revenue Code of 1986, as amended, and shall be construed in a manner consistent with such purpose.  In addition, each party hereto acknowledges that it has no proprietary or exclusive rights to the federal tax structure of the Transactions or any federal tax matter or federal tax idea related to the Transactions.

 

IN WITNESS WHEREOF , Lessee and Lessor have caused this Agreement to be executed by their duly authorized representatives as of the date first above written.

 

 

 

LESSOR:

LESSEE:

 

 

General Electric Capital Corporation

Momenta Pharmaceuticals, Inc.

 

 

 

 

 

 

 

 

 

 

By:

/s/ John Edel

 

By:

/s/ Richard P. Shea

 

 

 

 

 

 

 

 

 

 

Name:

John Edel

 

Name:

Richard P. Shea

 

 

 

 

 

 

 

 

 

 

 

Title:

SVP

 

Title:

VP, CFO & Treasurer

 

 



 

BIOTECH EQUIPMENT SCHEDULE

SCHEDULE NO. 001

DATED THIS December 30, 2005

TO MASTER LEASE AGREEMENT

DATED AS OF December 30, 2005

 

Lessor & Mailing Address:

 

Lessee & Mailing Address:

 

 

 

General Electric Capital Corporation

 

Momenta Pharmaceuticals, Inc.

83 Wooster Heights Road 5 th Floor

 

675 West Kendall Street

Danbury, CT 06810

 

Cambridge, MA 02142

 

This Schedule is executed pursuant to, and incorporates by reference the terms and conditions of, and capitalized terms not defined herein shall have the meanings assigned to them in, the Master Lease Agreement identified above (“ Agreement ” said Agreement and this Schedule being collectively referred to as “Lease”).  This Schedule, incorporating by reference the Agreement, constitutes a separate instrument of lease.

 

A.                  Equipment:  Subject to the terms and conditions of the Lease, Lessor agrees to Lease to Lessee the Equipment described below (the “Equipment” ).

 

Number
of Units

 

Capitalized
Lessor’s Cost

 

Manufacturer

 

Serial Number

 

Model and Type of Equipment

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

SEE EXHIBIT A ATTACHED HERETO AND MADE A PART HEREOF

 

B.                  Financial Terms

 

1.

Advance Rent (if any): $34,019.52

2.

Capitalized Lessor’s Cost: $ 1,667,159.04

3.

Basic Term (No. of Months): 54 Months.

4.

Basic Term Lease Rate Factor: 2.0405

5.

Basic Term Commencement Date: 12/30/05

6.

Lessee Federal Tax ID No.: 04-3561634

7.

Last Delivery Date:

8.

Daily Lease Rate Factor: .0680

 

9.                    First Termination Date:  Not Allowed

 

10.              Interim Rent:  For the period from and including the Lease Commencement Date to but not including the Basic Term Commencement Date (“Interim Period”), Lessee shall pay as rent (“Interim Rent”) for each unit of Equipment, the product of the Daily Lease Rate Factor times the Capitalized Lessor’s Cost of such unit times the number of days in the Interim Period.  Interim Rent shall be due on lease commencement.

 

11.              Basic Term Rent.  Commencing on January 1, 2006 and on the same day of each month thereafter (each, a “Rent Payment Date”) during the Basic Term, Lessee shall pay as rent (“Basic Term Rent”) the product of the Basic Term Lease Rate Factor times the Capitalized Lessor’s Cost of all Equipment on this Schedule.

 

C.                  Tax Benefits                               Depreciation Deductions:

 

1.                              Depreciation method is the 200 % declining balance method, switching to straight line method for the 1st taxable year for which using the straight line method with respect to the adjusted basis as of the beginning of such year will yield a larger allowance, taking into account the 30% or 50% special depreciation allowance and basis adjustment under Section 168(k)(1) of the Code, whichever is applicable.

 

2.                              Recovery Period:  5 years

 

3.                              Basis: 100 % of the Capitalized Lessor’s Cost.

 



 

D.                  Property Tax

PROPERTY TAX NOT APPLICABLE ON EQUIPMENT LOCATED IN MA.

 

Lessor may notify Lessee (and Lessee agrees to follow such notification) regarding any changes in property tax reporting and payment responsibilities.

 

E.                    Article 2A Notice

 

IN ACCORDANCE WITH THE REQUIREMENTS OF ARTICLE 2A OF THE UNIFORM COMMERCIAL CODE AS ADOPTED IN THE APPLICABLE STATE, LESSOR HEREBY MAKES THE FOLLOWING DISCLOSURES TO LESSEE PRIOR TO EXECUTION OF THE LEASE, (A) THE PERSON(S) SUPPLYING THE EQUIPMENT IS VARIOUS (THE “ SUPPLIER(S)”) , (B) LESSEE IS ENTITLED TO THE PROMISES AND WARRANTIES, INCLUDING THOSE OF ANY THIRD PARTY, PROVIDED TO THE LESSOR BY SUPPLIER(S), WHICH IS SUPPLYING THE EQUIPMENT IN CONNECTION WITH OR AS PART OF THE CONTRACT BY WHICH LESSOR ACQUIRED THE EQUIPMENT AND (C) WITH RESPECT TO SUCH EQUIPMENT, LESSEE MAY COMMUNICATE WITH SUPPLIER(S) AND RECEIVE AN ACCURATE AND COMPLETE STATEMENT OF SUCH PROMISES AND WARRANTIES, INCLUDING ANY DISCLAIMERS AND LIMITATIONS OF THEM OR OF REMEDIES. TO THE EXTENT PERMITTED BY APPLICABLE LAW, LESSEE HEREBY WAIVES ANY AND ALL RIGHTS AND REMEDIES CONFERRED UPON A LESSEE IN ARTICLE 2A AND ANY RIGHTS NOW OR HEREAFTER CONFERRED BY STATUTE OR OTHERWISE WHICH MAY LIMIT OR MODIFY ANY OF LESSOR’S RIGHTS OR REMEDIES UNDER THE DEFAULT AND REMEDIES SECTION OF THE AGREEMENT.

 

F.                    Stipulated Loss and Termination Value Table*

 

SEE ANNEX D ATTACHED HERETO AND MADE A PART HEREOF.

 

G.                  Modifications and Additions for This Schedule Only

 

For purposes of this Schedule only, the Agreement is amended as follows:

 

1. The DELIVERY, USE AND OPERATION Section subsection (a) of the Lease shall be deleted and the following substituted in its stead:

 

 The parties acknowledge that this is a sale/leaseback transaction and the Equipment is in Lessee’s possession as of the Lease Commencement Date.

 

2.                    BILL OF SALE

 

Lessee, in consideration of the Lessor’s payment of the amount set forth in B 2. above, which includes any applicable sales taxes (which payment Lessee acknowledges), hereby grants, sells, assigns, transfers and delivers to Lessor the Equipment along with whatever claims and rights Seller may have against the manufacturer and/or Supplier of the Equipment, including but not limited to all warranties and representations.  At Lessors request Lessee will use commercially reasonable efforts to cause Supplier to deliver to Lessor a written statement wherein the Supplier (i) consents to the assignment to Lessor of whatever claims and rights Lessee may have against the Supplier, (ii) agrees not to retain any security interest, lien or other encumbrance in or upon the Equipment at any time, and to execute such documents as Lessor may request to evidence the release of any such encumbrance, and (iii) represents and warrants to Lessor (x) that Supplier has previously conveyed full title to the Equipment to Lessee, (y) that the Equipment was delivered to Lessee and installation completed, and (z) that the final purchase price of the Equipment (or a specified portion of such purchase price) has been paid by Lessee.

 



 

Lessor is purchasing the Equipment for leasing back to Lessee pursuant to the Lease.  Lessee represents and warrants to Lessor that (i) Lessor will acquire by the terms of this Bill of Sale good title to the Equipment free from all liens and encumbrances whatsoever; (ii) Lessee has the right to sell the Equipment; and (iii) the Equipment has been delivered to Lessee in good order and condition, and conforms to the specifications, requirements and standards applicable thereto.

 

Lessee agrees to save and hold harmless Lessor from and against any and all federal, state, municipal and local license fees and taxes of any kind or nature (excluding Lessor’s income taxes), including, without limiting the generality of the foregoing, any and all excise, personal property, use and sales taxes and from and against any and all liabilities, obligations, losses, damages, penalties, claims, actions and suits resulting therefrom and imposed upon, incurred by or asserted against Lessor as a consequence of the sale of the Equipment to Lessor.

 

3.                    ACCEPTANCE

 

Pursuant to the provisions of the Lease, as it relates to this Schedule, Lessee hereby certifies and warrants that (i) all Equipment listed above has been delivered and installed (if applicable); (ii) Lessee has inspected the Equipment, and all such testing as it deems necessary has been performed by Lessee, Supplier or the manufacturer; and (iii) Lessee accepts the Equipment for all purposes of the Lease, the purchase documents and all attendant documents.

 

 Lessee does further certify that as of the date hereof (i) Lessee is not in default under the Lease; (ii) the representations and warranties made by Lessee pursuant to or under the Lease are true and correct on the date hereof and (iii) Lessee has reviewed and approves of the purchase documents for the Equipment, if any.

 

4.                     EQUIPMENT SPECIFIC PROVISIONS

 

The MAINTENANCE Section of the Lease is amended by adding the following as the fifth sentence in subsection (a):

 

Lessee shall, if requested by Lessor, obtain a certificate or service report from the manufacturer attesting to such condition.

 

Each reference contained in this Agreement to:

 

 (a) ”Adverse Environmental Condition” shall refer to (i) the existence or the continuation of the existence, of an Environmental Emission (including, without limitation, a sudden or non-sudden accidental or non-accidental Environmental Emission), of, or exposure to, any substance, chemical, material, pollutant, Contaminant, odor or audible noise or other release or emission in, into or onto the environment (including, without limitation, the air, ground, water or any surface) at, in, by, from or related to any Equipment, (ii) the environmental aspect of the transportation, storage, treatment or disposal of materials in connection with the operation of any Equipment or (iii) the violation, or alleged violation of any statutes, ordinances, orders, rules regulations, permits or licenses of, by or from any governmental authority, agency or court relating to environmental matters connected with any Equipment.

 

 (b) ”Affiliate” shall refer, with respect to any given Person, to any Person that directly or indirectly through one or more intermediaries, controls, or is controlled by, or is under common control with, such Person.

 

 (c) ”Contaminant” shall refer to those substances which are regulated by or form the basis of liability under any Environmental Law, including, without limitation, asbestos, polychlorinated biphenyls (“PCB’s”), and radioactive substances, or other material or substance which has in the past or could in the future constitute a health, safety or environmental hazard to any Person, property or natural resources.

 

 (d) ”Environmental Claim” shall refer to any accusation, allegation, notice of violation, claim, demand, abatement or other order on direction (conditional or otherwise) by any governmental authority or any Person for personal injury (including sickness, disease or death), tangible or intangible property damage, damage to the environment or other adverse effects on the environment, or for fines, penalties or restrictions, resulting from or based upon any Adverse Environmental Condition.

 

 (e) ”Environmental Emission” shall refer to any actual or threatened release, spill, emission, leaking, pumping, injection, deposit, disposal, discharge, dispersal, leaching or migration into the indoor or outdoor environment, or into or out of any of the

 



 

Equipment, including, without limitation, the movement of any Contaminant or other substance through or in the air, soil, surface water, groundwater or property.

 

 (f) ”Environmental Law” shall mean any federal, foreign, state or local law, rule or regulation pertaining to the protection of the environment, including, but not limited to, the Comprehensive Environmental Response, Compensation, and Liability Act (“CERCLA”) (42 U.S.C. Section 9601 et seq .), the Hazardous Material Transportation Act (49 U.S.C. Section 1801 et seq .), the Federal Water Pollution Control Act (33 U.S.C. Section 1251 et seq .), the Resource Conservation and Recovery Act (42 U.S.C. Section 6901 et seq .), the Clean Air Act (42 U.S.C. Section 7401 et seq .), the Toxic Substances Control Act (15 U.S.C. Section 2601 et seq .), the Federal Insecticide, Fungicide, and Rodenticide Act (7 U.S.C. Section 1361 et seq .), and the Occupational Safety and Health Act (19 U.S.C. Section 651 et seq .), as these laws have been amended or supplemented, and any analogous foreign, federal, state or local statutes, and the regulations promulgated pursuant thereto.

 

 (g) ”Environmental Loss” shall mean any loss, cost, damage, liability, deficiency, fine, penalty or expense (including, without limitation, reasonable attorneys’ fees, engineering and other professional or expert fees), investigation, removal, cleanup and remedial costs (voluntarily or involuntarily incurred) and damages to, loss of the use of or decrease in value of the Equipment arising out of or related to any Adverse Environmental Condition.

 

 (h) ”Person” shall include any individual, partnership, corporation, trust, unincorporated organization, government or department or agency thereof and any other entity.

 

Lessee shall fully and promptly pay, perform, discharge, defend, indemnify and hold harmless Lessor and its Affiliates, successors and assigns, directors, officers, employees and agents from and against any Environmental Claim or Environmental Loss.

 

The provisions of this Schedule shall survive any expiration or termination of the Lease and shall be enforceable by Lessor, its successors and assigns.

 

 The MAINTENANCE Section subsection (a) of the Lease shall be amended by adding the following at the end thereof:

 

RETURN PROVISIONS:  In addition to the provisions provided for in the RETURN OF EQUIPMENT Section of the Lease, and provided that Lessee has elected not to exercise its option to purchase the Equipment or renew the Lease Lessee shall, at its expense:

 

 (a) at least sixty (60  days prior to expiration or earlier termination of the Lease, upon receiving reasonable notice from Lessor, use commercially reasonable efforts to provide or use commercially reasonable efforts to cause the vendor(s) or manufacturer(s) to provide to Lessor the following documents:  (i) one set of service manuals, and operating manuals including replacements and/or additions thereto, such that all documentation is completely up-to-date for the applicable equipment model;  (ii) one set of documents, detailing equipment configuration, operating requirements, maintenance records, and other technical data concerning the set-up and operation of the Equipment, including replacements and/or additions thereto, such that all documentation is completely up-to-date;

 

  (b) at least sixty (60) (days prior to expiration or earlier termination of the Lease, cause manufacturer’s representative or qualified equipment maintenance provider, reasonably acceptable to Lessor, (the “Authorized Inspector”) to perform a comprehensive physical inspection, including testing all material and workmanship of the Equipment and ensure all Equipment and equipment operations conform to all applicable local, state, and federal laws, health and safety guidelines including the then current FDA regulations; and if during such inspection, examination and test, the Authorized Inspector finds any of the material or workmanship to be defective or the Equipment not operating within manufacturer’s specifications and the then current FDA regulations, then Lessee shall repair or replace such defective material and, after corrective measures are completed, Lessee will provide for a follow-up inspection of the Equipment by the Authorized Inspector as outlined in the preceding clause;  Notwithstanding anything contained in this subsection (b) to the contrary, in no event shall Lessee be required to repair or replace any defective material or workmanship that (i) arises from a manufacturer defect, (ii) is the result of reasonable wear and tear, or in the event new models of such Equipment are on the market, that are remedied by any such new models.

 



 

 (c) have each item of Equipment returned with an in-depth field service report customary in the industry for such Equipment detailing said inspection as outlined in Section (e) above.  The report shall certify that the Equipment has been properly inspected, examined and tested and is operating within the manufacturer’s specifications, reasonable wear and tear excepted;

 

 (d) where reasonably practical, properly remove or treat all rust or corrosion;

 

 (e) where reasonably practical, properly remove all Lessee installed markings which are not necessary for the operation, maintenance or repair of the Equipment;

 

5.                    LEASE TERM OPTIONS

 

Early Lease Term Options

 

The Lease is amended by adding the following thereto:

 

EARLY PURCHASE OPTION:

 

(a)  Provided that the Lease has not been earlier terminated and provided further that Lessee is not in default under the Lease or any other agreement between Lessor and Lessee, Lessee may, UPON AT LEAST 30 DAYS BUT NO MORE THAN 270 DAYS PRIOR WRITTEN NOTICE TO LESSOR OF LESSEE’S IRREVOCABLE ELECTION TO EXERCISE SUCH OPTION, purchase on an AS IS BASIS all (but not less than all) of the Equipment listed and described in this Schedule on the rent payment date (the “Early Purchase Date”) which is 48 months from the Basic Term Commencement Date for a price equal to Twenty-One and One Hundred Seventy-Five Thousandths percent (21.175%) of the Capitalized Lessor’s Cost (the “FMV Early Option Price”), plus all applicable sales taxes.

 

Lessor and Lessee agree that the FMV Early Option Price is a reasonable prediction of the Fair Market Value (as such term is defined in the PURCHASE OPTION Section subsection (b) of the Lease hereof) of the Equipment at the time the option is exercisable.  Lessor and Lessee agree that if Lessee makes any non-severable improvement to the Equipment which increases the value of the Equipment and is not required or permitted by the MAINTENANCE Section or the RETURN OF EQUIPMENT Section of the Lease prior to lease expiration, then at the time of such option being exercised, Lessor and Lessee shall adjust the purchase price to reflect any addition to the price anticipated to result from such improvement.  (The purchase option granted by this subsection shall be referred to herein as the “Early Purchase Option”.)

 

(b)               If Lessee exercises its Early Purchase with respect to the Equipment leased hereunder, then on the Early Purchase Date, Lessee shall pay to Lessor any Rent and other sums due and unpaid on the Early Purchase Option Date and Lessee shall pay the FMV Early Option Price, plus all applicable sales taxes, to Lessor in cash.

 

(c)                In the event of any conflict between the language contained in this Early Purchase Option and the language contained in section 18 of the Lease, the language in this Early Purchase Option shall control.

 

H.                  Payment Authorization

 

You are hereby irrevocably authorized and directed to deliver and apply the proceeds due under this Schedule as follows:

 

Company Name

 

Address

 

Amount

 

Momenta Pharmaceuticals

 

675 West Kendall Street, Cambridge, MA

 

$

1,242,037.08

 

General Electric (Adv Rent)

 

83 Wooster Heights Road, Danbury, CT

 

$

25,683.72

*

General Electric (Interim Rent)

 

83 Wooster Heights Road, Danbury, CT

 

$

1,133.98

 

Waters Corporation

 

4559 Payshere Circle, Chicago, IL

 

$

398,304.26

 

 


*Applied $8,335.80 from Good Faith Deposit to Advance Rent

 

This authorization and direction is given pursuant to the same authority authorizing the above-mentioned financing.

 



 

Except as expressly modified hereby, all terms and provisions of the Agreement shall remain in full force and effect.  This Schedule is not binding or effective with respect to the Agreement or Equipment until executed on behalf of Lessor and Lessee by authorized representatives of Lessor and Lessee, respectively.

 

IN WITNESS WHEREOF, Lessee and Lessor have caused this Schedule to be executed by their duly authorized representatives as of the date first above written.

 

 

LESSOR:

LESSEE:

 

 

 

 

General Electric Capital Corporation

Momenta Pharmaceuticals, Inc.

 

 

 

 

By:

/s/ John Edel

 

By:

/s/ Richard P. Shea

 

 

 

 

 

Name:

John Edel

 

Name :

Richard P. Shea

 

 

 

 

 

Title:

SVP

 

Title:

Vice President, CFO, Treasurer

 

 


Exhibit 10.47

 

SECOND AMENDMENT TO SUBLEASE

 

THIS SECOND AMENDMENT TO SUBLEASE (“Second Amendment”) is entered into as of this 21st day of November, 2005 by and between Vertex Pharmaceuticals Incorporated (“Sublandlord”) and Momenta Pharmaceuticals, Inc. (“Subtenant”).

 

R E C I T A L S

 

A.  Sublandlord and Subtenant entered into a sublease, dated as of September 14, 2004 in which Sublandlord subleased to Subtenant that certain real property on the fourth floor and the first floor (“Sublease Premises”) of the building located at 675 West Kendall Street, Cambridge, Massachusetts (“Building”), which sublease Sublandlord and Subtenant amended by a First Amendment to Sublease (“First Amendment”) dated September 7, 2005 (as amended, “Sublease”); and

 

B.  The Sublease provided in Section 1(b) for the use of approximately 20,000 rentable square feet located on the third floor of the Building and defined in the Sublease as the “Temporary Premises” from the Commencement Date until October 31, 2005 at which time Subtenant was to vacate the Temporary Premises in accordance with the terms of the Sublease; and

 

C.  Sublandlord has so delivered the Sublease Premises to Subtenant, but Subtenant desires to continue on a temporary basis to occupy the Temporary Premises as well as the Sublease Premises and Sublandlord has agreed to permit such occupancy by further extending the period of such occupancy by Subtenant of the Temporary Premises on the terms and conditions set forth herein, as well as revising and confirming other provisions of the Sublease as set forth herein; and

 

D.  Sublandlord and Subtenant desire to increase the Sublease Premises by adding space on the fifth floor of the Building on the terms and conditions set forth herein.

 

NOW, THEREFORE , for good and valuable consideration, the receipt and sufficiency of which are hereby acknowledged, Sublandlord and Subtenant, for themselves and their respective successors and assigns, covenant and agree as follows:

 

1.                                        Extension of Temporary Premises Demise.   The date on which Subtenant is obligated to vacate the Temporary Premises pursuant to Section 1(b) of the Sublease is changed from October 31, 2005 to March 31, 2006 (the “Temporary Premises Expiration Date”).  The Temporary Premises Expiration Date shall not be extended due to any failure of the Fifth Floor Improvements to be completed by April 1, 2006 or for any other reason.  Sublandlord shall have reasonable, periodic access to the Temporary Premises to design and prepare for work at the Temporary Premises to take place after the Temporary Premises Expiration Date.  In exercising such right of access, Sublandlord will not unreasonably interfere with Subtenant’s use of the Temporary Premises.

 



 

2.                                        Payment of Temporary Premises Rent.   Subsection (i) of Schedule 1, “Rent,” is amended to add in the second column “(provided, however, that if there is no Event of Default prior to the Temporary Premises Expiration Date, no Rent with respect to the Temporary Premises shall be due from Subtenant to Sublandlord during the period commencing November 1, 2005 through the Temporary Premises Expiration Date)”.

 

3.                                        Definitions . Unless otherwise set forth in this Second Amendment, all capitalized terms shall have the same meaning as set forth in the Sublease.

 

4.                                        Effective Date . This Second Amendment shall take effect as of the date on which Landlord consents in writing to this Second Amendment (“ Effective Date ”).

 

5.                                        Ratification .  The Sublease, as amended hereby, is hereby ratified, confirmed and deemed in full force and effect in accordance with its terms.  Each party represents to the other that such party (a) is currently unaware of any default by the other party under the Sublease; and (b) has full power and authority to execute and deliver this Second Amendment and this Second Amendment represents a valid and binding obligation of such party enforceable in accordance with its terms.

 

6.                                        Multiple Counterparts .  This Second Amendment may be executed in multiple counterparts, each of which when so executed and delivered shall be deemed to be originals and together shall constitute but one and the same instrument.

 

7.                                        No Offer.   Submission of this instrument for examination and signature by Subtenant does not constitute an offer to lease or a reservation of or option for lease, and this instrument is not effective as a sublease amendment or otherwise until executed and delivered by both Sublandlord and Subtenant and consented to by Master Landlord.

 

8.                                        Commencement Date.   Sublandlord and Subtenant agree that the Commencement Date of the Sublease was September 14, 2004 and the Sublease Premises Rent Commencement Date was August 1, 2005 and have executed the Commencement Date Agreement attached hereto as Exhibit B.

 

9.                                        Fifth Floor Premises.  Commencing on April 1, 2006 (the “Fifth Floor Commencement Date”), the Sublease Premises shall be expanded to include 25,131 rentable square feet on the Fifth Floor of the Building and shown on Exhibit C attached hereto (“Fifth Floor Premises”).  The Sublease is amended to reflect such expansion by the provisions set forth in Section 11 below.  Notwithstanding the foregoing, the Fifth Floor Commencement Date shall be extended for Sublandlord Delays (as defined in Exhibit E attached hereto).

 

10.                                  Remeasurement.   Pursuant to Section 1(l) of the Sublease, Sublandlord has remeasured the Sublease Premises according to the measurement standards set forth in Section 1(l).  Such remeasurement indicates that the Sublease Premises as of the date hereof consists of 52,817 rentable square feet on the fourth floor and 506 rentable square feet on the first floor.

 

11.                                  Amendments to Sublease to Reflect Remeasurement and Addition of the Fifth Floor Premises . To reflect the changes made by remeasurement of the Sublease Premises (set out in Section 10 above) and addition of the Fifth Floor Premises to the Sublease Premises (set out in Section 9 above), the following provisions of the Sublease are amended, effective as of the Sublease Premises Rent Commencement Date, as follows:

 

2



 

(a)                                   “Sublease Premises” as defined in the Defined Terms of the Sublease is amended to read as follows:

 

A portion of the Master Premises, consisting of (i) the entire fourth floor of the Building comprised of 52,817 rentable square feet as depicted in Exhibit C-1 and (ii) 506 rentable square feet located on the first floor of the Building as depicted in Exhibit  C-2.  Commencing on April 1, 2006 (the “Fifth Floor Commencement Date”), the Sublease Premises shall be expanded to include 25,131 rentable square feet as depicted on Exhibit C-3 (the “Fifth Floor Premises”).  The parties agree that 25,131 rentable square feet is the area of the Fifth Floor Premises and neither party shall have the right to remeasure the Fifth Floor Premises, notwithstanding the provision for remeasurement set forth in Section 1(l).  On and after the Fifth Floor Commencement Date, the Sublease Premises shall consist of 78,454 rentable square feet, comprised of 52,817 rentable square feet on the fourth floor (after remeasurement as set forth in the Second Amendment to Sublease), 506 rentable square feet on the first floor (after remeasurement as set forth in the Second Amendment to Sublease), and 25,131 rentable square feet on the fifth floor.

 

(b)                                  Schedule 1, Rent, is amended by replacing the original Schedule 1 with Schedule 1 set forth in Exhibit D attached to this Second Amendment.  To the extent Subtenant has not paid any amounts set forth on the schedule as of the date of this Second Amendment, Subtenant shall do so within twenty (20) days following the date of this Second Amendment.  Notwithstanding anything in this Second Amendment (including Exhibit D) to the contrary, no Rent shall be due or payable with respect to the Fifth Floor Premises until the Fifth Floor Rent Commencement Date.

 

(c)                                   “Subtenant’s Share” as defined in the Defined Terms of the Sublease is amended to read as follows:

 

The ratio, expressed as a percentage, of the Rentable Square Footage of the premises leased by Subtenant to the Rentable Square Footage of the Master Premises, equal to (i) 6.88% from the Commencement Date until the day prior to the Sublease Premises Rent Commencement Date, (ii) 25.22% from the Sublease Premises Rent Commencement Date through the Temporary Premises Expiration Date, and (iii) 26.99% thereafter.

 

(d)                                  Section 1(e), Parking, is amended to revise the parenthetical in the first sentence to read as follows:

 

(e)  Parking .  Prior to the Sublease Premises Rent Commencement Date, Sublandlord shall rent to Subtenant thirty (30) parking spaces.  From the Sublease Premises Rent Commencement Date through October 31, 2005, Sublandlord shall rent to Subtenant sixty-eight (68) parking spaces.  On and after November 1, 2005, Sublandlord shall rent to Subtenant 1.5 parking spaces per 1,000 rentable square feet of the Sublease Premises,

 

3



 

excluding the Temporary Premises (i.e. eighty (80) spaces from the November 1, 2005 until the Fifth Floor Commencement Date, and one hundred eighteen (118) spaces thereafter).  Subtenant shall pay parking fees at the prevailing rates for the Complex (currently $225/space/month).  Any additional parking spaces offered to Subtenant by Sublandlord shall be on terms and conditions as reasonably determined by Sublandlord, provided that in no instance shall Subtenant be obligated to pay parking fees greater than the prevailing rates for the Complex.  At any time when Subtenant notifies Sublandlord that it wishes additional parking spaces, Sublandlord may provide such parking spaces if, as and when available as determined in Sublandlord’s sole discretion. All parking spaces shall be unreserved and otherwise subject to the terms and conditions of the Master Lease.

 

(e)                                   The first and second paragraphs of the definition of “Security Deposit” as defined in the Defined Terms of the Sublease are deleted and replaced with the following:

 

During the initial Sublease Term, $1,777,780, provided, however, that if the Sublease Premises is additionally expanded in addition to that described in the Second Amendment (being 78,454 rentable square feet), the Security Deposit shall be increased by fifty (50%) of the amount that is equal to the average annual Fixed Rent for such additional rentable square footage.   If the Sublease Term is extended pursuant to Section 1(i), the Security Deposit during the Extension Term shall be fifty (50%) of the amount that is equal to the average annual Fixed Rent over the Extension Term.

 

Within twenty (20) days after the Effective Date of this Second Amendment, Subtenant shall deliver to Sublandlord either (i) an additional letter of credit in the amount of 292,780.00  complying with the terms and conditions of the Sublease, or (ii) an amendment to Silicon Valley Bank Standby Letter of Credit No. SVBSF003033 increasing the amount thereunder to $1,777,780.00, which amendment shall be in form and substance reasonably satisfactory to Sublandlord.

 

(f)                                     The plan attached to this Second Amendment as Exhibit C, depicting the Fifth Floor Premises, is added as an additional exhibit, Exhibit C-3, to the Sublease.

 

(g)                                  As of the execution of this Second Amendment, Subtenant and its agents, employees, invitees, consultants and contractors (collectively “Agents”) shall have the right to enter the Fifth Floor Premises for the sole purpose of space planning , and document preparation in connection with the Fifth Floor Improvements (as defined below), Subtenant agreeing that no construction work or installation of any property of any kind shall be permitted in the Fifth Floor Premises prior to the Effective Date (and then only in accordance with the following sentence). As of the Effective Date of this Second Amendment, Subtenant and its Agents shall have the right to enter the Fifth Floor Premises for the construction of the Fifth Floor Improvements and installation of furniture, equipment and furnishings in the Fifth Floor Premises, all at Subtenant’s sole cost ( but subject to Sublandlord’s contribution of the Fifth Floor Allowance (as defined

 

4



 

in Exhibit E attached hereto); provided that Subtenant shall obtain the consent of Sublandlord and Master Landlord to any Alterations as required by Section 6 of the Sublease ) .  Such access shall be subject to all of the terms and conditions of the Sublease, except that Subtenant shall not be obligated to pay Fixed Rent or Additional Rent on account thereof until the Fifth Floor Commencement Date.  Any entry by Subtenant or any of its Agents pursuant to this Subsection  (g) shall be undertaken at Subtenant’s sole risk.

 

Subtenant agrees to accept the Fifth Floor Premises in its current “as is” shell and core condition.  Except for the Fifth Floor Improvement Allowance, as defined in Exhibit E, any improvements to be made to the Fifth Floor Premises shall be made at the sole cost of Subtenant and shall be subject to the provisions of this Sublease governing Alterations.  Fifth Floor Improvements to be made to the Sublease Premises are discussed in the last paragraph of this subsection below.  Subtenant acknowledges that no rights, easements or licenses are acquired by Subtenant by implication or otherwise except as expressly set forth herein.  Subtenant has inspected or will inspect, prior to delivery of possession of the Fifth Floor Premises, the Fifth Floor Premises and become thoroughly acquainted with their condition, excepting any latent defects.  Subtenant acknowledges that the taking of possession of the Fifth Floor Premises by Subtenant on the Effective Date will be conclusive evidence that the Fifth Floor Premises were in good and satisfactory condition at the time such possession was taken, except for any latent defects. Subtenant specifically agrees that, except as specifically provided by Laws in force as of the date hereof and except as specifically provided for herein, Sublandlord has no duty to make any disclosures concerning the condition of the Building and the Fifth Floor Premises and/or the fitness of the Building and the Fifth Floor Premises for Subtenant’s intended use and Subtenant expressly waives any duty which Sublandlord might have to make any such disclosures.

 

Provisions regarding the initial tenant improvements to be installed and constructed by Subtenant upon the Fifth Floor Premises and the allowance for initial tenant improvements to be paid by Sublandlord are attached as Exhibit E to this Second Amendment (the “Fifth Floor Improvements”).  Subtenant shall use reasonable efforts to substantially complete the Fifth Floor Improvements no later than April 1, 2006 (the “Fifth Floor Improvements Completion Date”).  Subject to Exhibit E, Subtenant shall submit for Sublandlord’s approval (which approval shall not be unreasonably withheld) and for Master Landlord’s approval, pursuant to the requirements of the Master Lease, the preliminary plans and thereafter the final plans and specifications for the Fifth Floor Improvements.  Subtenant construction of the Fifth Floor Improvements shall otherwise comply with the terms and conditions of Section 3.3 of the Master Lease, including, but not limited to, Subtenant’s obligation to remove such Fifth Floor Improvements if required by Master Landlord in accordance therewith; provided , however , Subtenant shall have no obligation to remove Fifth Floor Improvements unless the same were identified for removal at the time Master Landlord gave its consent thereto.  All permanent portions of the Fifth Floor Improvements installed in the Fifth Floor Premises, including all fixtures and cabinet work, if any, will be and shall remain the property of Sublandlord.

 

5



 

Subtenant shall have the non-exclusive right, in common with others entitled thereto, to use for ingress and egress purposes the stairway shown as “Stair 1” on Exhibit C-3 to the Sublease (a copy of which is attached to this Second Amendment as Exhibit C).  Sublandlord shall construct, prior to the Fifth Floor Commencement Date, at Sublandlord’s expense, a common vestibule/corridor outside the Fifth Floor Premises providing secured access between the stairway and the Fifth Floor Premises.

 

(h)                                  (i)  Due to the remeasurement of the Sublease Premises, Sublandlord’s Contribution as set forth in Section 3(b) of Exhibit TI of the Sublease shall be increased to equal one hundred sixty-five dollars per rentable square foot for the Sublease Premises as remeasured (excluding the Temporary Premises and the Fifth Floor Premises) and Sublandlord waives the requirement that Sublandlord’s Contribution be used for Subtenant Improvements, also set forth in Section 3(b) of Exhibit TI, with respect to the Subtenant Improvements on the fourth and first floors only.  Therefore, within thirty (30) days following the Effective Date of this Second Amendment, provided there is no Event of Default at such time, Sublandlord shall pay to Subtenant the amount of such remaining Sublandlord’s Contribution, being $1,373,295.  (ii)  Sublandlord’s Fifth Floor Improvement Allowance is set out and defined in Exhibit E.

 

12.                                  Master Landlord Consent .  BMR-675 West Kendall Street LLC, a Delaware limited liability company, as a successor to Kendall Square, LLC is the Master Landlord as defined in the Sublease under the Master Lease, also defined in the Sublease.  Following the parties’ execution of this Second Amendment, Sublandlord shall promptly submit this Second Amendment to the Master Landlord for its consent.  The effectiveness of this Second Amendment is conditioned on the consent to this Second Amendment by Master Landlord as indicated by its execution of this Second Amendment in the space provided below (or the execution of another consent form reasonably satisfactory to Sublandlord and Subtenant) on or before November 30, 2005.  In the event Master Landlord fails to respond to Sublandlord’s request for consent by November 30, 2005, Subtenant shall not be responsible for hold over rent with respect to the Temporary Premises until thirty (30) days after Sublandlord sends Subtenant notice requesting that Subtenant vacate the Temporary Premises.   In the event Master Landlord affirmatively denies consent, Subtenant shall not be responsible for hold over rent with respect to the Temporary Premises for the time period from December 1, 2005 through four (4) days following such denial, but continued occupancy thereafter shall constitute hold over with respect to the Temporary Premises only (but not the Sublease Premises) .

 

13.                                  First Floor Premises and Fourth Floor Premises Replacement Plans.   The plan attached to this Second Amendment as Exhibit F, depicting the specific location of that portion of the Sublease Premises located on the fourth floor, shall replace Exhibit C-1 of the Sublease.  The plan attached to this Second Amendment as Exhibit G, depicting the specific location of that portion of the Sublease Premises located on the first floor, shall replace Exhibit C-2 of the Sublease.

 

14.                                  Amendment to Notice of Sublease.    At the request of either party, Sublandlord and Subtenant will execute and record an amendment to the existing notice of sublease reflecting the changes to the Sublease Premises described herein.

 

6



 

IN WITNESS WHEREOF, the parties hereto have executed this instrument under seal as of the day and year first above written.

 

 

 

SUBLANDLORD:

 

 

 

VERTEX PHARMACEUTICALS
INCORPORATED

 

 

 

 

 

By:

/s/ Kenneth S. Boger

 

 

Name:

Kenneth S. Boger

 

 

Title:

Senior VP & General Counsel

 

 

 

 

 

 

SUBTENANT:

 

 

 

MOMENTA PHARMACEUTICALS, INC.

 

 

 

 

 

By:

/s/ Richard P. Shea

 

 

 

Richard P. Shea, its Vice President, Treasurer and
Chief Financial Officer

 

7



 

EXHIBIT A

MASTER LANDLORD CONSENT

 

The undersigned, BMR-675 West Kendall Street LLC, hereby consents to this Second Amendment, subject to the terms and conditions of that certain Consent to Sublease dated as of September 23, 2004, by and between KS Parcel A, LLC (as predecessor-in-interest to Master Landlord), Sublandlord and Subtenant.

 

 

 

MASTER LANDLORD
BMR-675 WEST KENDALL STREET LLC

 

 

 

 

 

By:

/s/ Gary A. Kreitzer

 

Name:

Gary A. Kreitzer

 

Title:

Executive V.P.

 

Date:

11-21-05

 



 

EXHIBIT B

 

EXECUTED COMMENCEMENT DATE AGREEMENT

 

FOLLOWING THIS PAGE

 

B-1



 

COMMENCEMENT DATE AGREEMENT

 

THIS COMMENCEMENT DATE AGREEMENT (“Agreement”) is entered into as of this              day of November, 2005, by and between VERTEX PHARMACEUTICALS INCORPORATED (“Sublandlord”) and MOMENTA PHARMACEUTICALS, INC. (“Subtenant”).

 

W I T N E S S E T H :

 

1.                                        This Agreement is made pursuant to Section 1(a) of that certain Sublease dated as of September 14, 2004, between Sublandlord and Subtenant (the “Sublease”).

 

2.                                        It is hereby stipulated that the Commencement Date, as defined in the Sublease, is September 14, 2004 and the Term of the Sublease shall expire on April 30, 2011 as set forth and provided for in the Sublease.

 

3.                                        It is hereby stipulated that the Sublease Premises Rent Commencement Date, as defined in the Sublease, is August 1, 2005.

 

IN WITNESS WHEREOF, the parties hereto have executed this instrument under seal as of the day and year first above written.

 

 

 

SUBLANDLORD :

 

 

 

VERTEX PHARMACEUTICALS
INCORPORATED

 

 

 

 

 

By:

 /s/ Kenneth S. Boger

 

Name:

 Kenneth S. Boger

 

Title:

   Senior V.P. & General Counsel

 

 

 

 

 

SUBTENANT :

 

 

 

MOMENTA PHARMACEUTICALS, INC.

 

 

 

 

 

By:

 /s/ Richard P. Shea

 

Name:

 Richard P. Shea

 

Title:

   VP, CFO and Treasurer

 

1



 

EXHIBIT C

 

EXHIBIT C-3 TO BE ADDED TO THE SUBLEASE

 

Graphic Omitted

 

1



 

EXHIBIT D

 

REVISED SCHEDULE 1 TO THE SUBLEASE

 

Schedule 1

 

Rent

 

Fixed Rent:

 

Premises:

 

Rental Period:

 

Annual Rent Per
Rentable Square
Foot:

 

Annual Fixed Rent:

 

Payable in Monthly
Installments:

 

 

 

 

 

 

 

 

 

(i)  Temporary Premises (“Temporary Premises Fixed Rent”)

 

From the Temporary Premises Rent Commencement Date through the Temporary Premises Expiration Date (provided, however, that if there is no Event of Default prior to the Temporary Premises Expiration Date, no Rent shall be due with respect to the Temporary Premises from Subtenant to Sublandlord during the period commencing November 1, 2005 through the Temporary Premises Expiration Date)

 

$45.00

 

$900,000.00

 

$75,000.00

 

1



 

Fixed Rent:

 

Premises:

 

Rental Period:

 

Annual Rent Per
Rentable Square
Foot:

 

Annual Fixed Rent:

 

Payable in Monthly
Installments:

 

 

 

 

 

 

 

 

 

(ii)  Sublease Premises (“Sublease Premises Fixed Rent”)

 

(a)  From the Sublease Premises Rent Commencement Date through March 31, 2006

 

$39.00

 

$2,079,597.00

 

$173,299.75

 

 

 

 

 

 

 

 

 

 

 

(b)  From April 1, 2006 through April 30, 2006

 

(i) $39.00 (for the Sublease Premises exclusive of the Fifth Floor Premises), and

 

(i) $2,079,597.00 and

 

(i) $173,299.75 and

 

 

 

 

 

 

 

 

 

 

 

 

 

(ii)  $46.00 (for the Fifth Floor Premises)

 

(ii) $1,156,026.00

 

(ii) 96,335.50

 

 

 

 

 

 

For a total of:

 

For a total of:

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

$3,235,623.00

 

$269,635.25

 

 

 

 

 

 

 

 

 

 

 

(c)  From May 1, 2006 through April 30, 2011

 

(i) $45.00 (for the Sublease Premises exclusive of the Fifth Floor Premises), and

 

(i) $2,399,535.00 and

 

(i) $199,961.25 and

 

 

 

 

 

 

 

 

 

 

 

 

 

(ii) $46.00 (for the Fifth Floor Premises)

 

(ii) $1,156,026.00

 

(ii) 96,335.50

 

 

 

 

 

 

For a total of:

 

For a total of:

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

$3,555,561.00

 

296,296.75

 

2



 

EXHIBIT E

 

FIFTH FLOOR IMPROVEMENTS WORK LETTER

 

Sublandlord and Subtenant agree as follows with respect to the improvements to be installed in the Fifth Floor Premises:

 

1.                                        INTENTIONALLY OMITTED .

 

2.                                        SUBTENANT IMPROVEMENTS .

 

A.                                    Subtenant’s Architect and Engineer .  Subtenant’s architect shall be R. E. Dinneen Architects & Planners, Inc. and Subtenant’s engineer shall be AHA Consulting Engineers.  Sublandlord hereby approves such architect and engineer for the design of the Fifth Floor Improvements.  Notwithstanding the foregoing, Subtenant may, at its option, retain an architect or engineer other than those listed above, subject to Sublandlord’s reasonable approval, which approval shall not be unreasonably withheld or conditioned and shall be granted or denied by Sublandlord within five (5) business days after Subtenant has submitted the proposed alternative architect or engineer to Sublandlord.

 

B.                                      Construction Documents .  Subtenant shall prepare, or cause to be prepared, preliminary drafts of construction drawings and specifications (the “Construction Documents”) for all improvements desired by Subtenant in the Fifth Floor Premises, which shall include, as applicable and without limitation, communications and data cabling, roof-mounted antennae and/or satellite dishes, lab space, millwork, cabinetry, woodwork, interior and exterior signage, and customized fixtures, and submit the Construction Documents to Sublandlord and Master Landlord.  The Construction Documents shall include (i) architectural drawings and specifications for Subtenant’s partition layout, reflected ceiling, telephone, data and electrical outlets, and finish schedule; and (ii) mechanical plans and specifications where necessary for installation of the heating, ventilation and air-conditioning system and ductwork and electrical, security, life safety and data/telecommunications facilities.  Subtenant shall be responsible for the costs and expenses of Subtenant’s architect or engineer in connection with preparation of the Construction Documents, subject, however, to reimbursement of such costs and expenses from the Fifth Floor Improvement Allowance (as defined below).

 

C.                                      Sublandlord’s Approval .  The Construction Documents shall be subject to Sublandlord’s and Master Landlord’s approval, which shall not be unreasonably withheld or conditioned subject to the terms of the Master Lease.   Within ten (10) business days after delivery of a complete set of the Construction Documents to Sublandlord, Sublandlord shall, in writing, either approve such Construction Documents or notify Subtenant of the specific item(s) of such Construction Documents of which Sublandlord disapproves and a detailed description of the reason(s) for such disapproval.  If Sublandlord fails to deliver its approval or disapproval within such ten (10) business days, Sublandlord will be deemed to have approved the Construction Documents. If Sublandlord disapproves any of the Construction Documents, within ten (10) business days after receipt of Sublandlord’s disapproval notice, Subtenant shall revise and resubmit same to Sublandlord for approval, which approval shall not be unreasonably withheld or conditioned (the “Revised Construction Documents”).  If Sublandlord does not respond to the

 

1



 

Construction Documents or the Revised Construction Documents within ten (10) business days after receipt of same, such drawings shall be deemed approved as most recently submitted.  The above process shall be repeated until such time as Sublandlord has approved or is deemed to have approved the Revised Construction Documents.  Sublandlord agrees to use its best efforts to conclude final preparation and approval of the Revised Construction Documents within thirty (30) days after the date on which the Construction Documents are initially submitted by Subtenant to Sublandlord.

 

D.                                     Final Construction Documents and Other Information .  The Construction Documents or the Revised Construction Documents, as approved (or deemed approved) by Sublandlord and Master Landlord, are hereinafter referred to as the “Final Construction Documents.” Subtenant may request changes to the Final Construction Documents.  Any changes shall be subject to Sublandlord’s and Master Landlord’s approval, which approval shall not be unreasonably withheld or delayed pursuant to the terms of the Master Lease, to the extent Sublandlord’s approval was originally required with respect thereto pursuant to Section 2.C above.

 

Subtenant shall submit to Sublandlord and Master Landlord in writing the following information at least seven (7) days prior to the commencement of construction of the Fifth Floor Improvements:

 

(i)                                      The name and address of Subtenant’s general contractor (“Subtenant’s General Contractor”) and the names of the plumbing, mechanical and electrical subcontractors, if any, which such Subtenant’s General Contractor intends to engage in the construction of the Fifth Floor Improvements.  All such contractors shall be subject to Sublandlord’s and Master Landlord’s reasonable prior written approval which approval shall not be unreasonably withheld or delayed; provided, however, Sublandlord hereby pre-approves the following general contractor:  William A. Berry & Sons, Inc.

 

(ii)                                   Certificates of insurance evidencing the insurance required under Section 2.G hereof.

 

If Master Landlord requires the purchase of payment or performance bonds in connection with the construction of the Fifth Floor Improvements, Subtenant will pay the costs associated therewith and will not charge any portion of such costs to Sublandlord.

 

E.                                       Subtenant’s Covenants .  Subtenant shall cause all work required to complete the Subtenant improvements to be performed in accordance with the Final Construction Documents (the “Fifth Floor Improvements”).  All required building and other permits in connection with the construction and completion of the Fifth Floor Improvements shall be obtained and paid for by Subtenant, subject to reimbursement of such costs from the Fifth Floor Improvement Allowance.

 

F.                                       Sublandlord’s Covenants .  Subtenant and Subtenant’s General Contractor, at the expense of Subtenant or Subtenant’s General Contractor, subject to reimbursement of such costs from the Fifth Floor Improvement Allowance, shall be allowed to utilize power, water and other existing utility facilities as necessary and required in connection with construction of the Fifth Floor

 

2



 

Improvements in the Fifth Floor Premises.  In addition, Subtenant and Subtenant’s General Contractor shall be allowed to utilize on a non-exclusive basis the Building’s freight elevator and loading docks in connection with construction of the Fifth Floor Improvements in the Fifth Floor Premises at the expense of Subtenant or Subtenant’s General Contractor, subject to reimbursement of such costs from the Fifth Floor Improvement Allowance.  Subtenant agrees to coordinate use of the freight elevator and loading docks with Sublandlord.

 

G.                                      Insurance .  Subtenant shall provide, or shall cause Subtenant’s General Contractor to provide, insurance which satisfy the requirements of Section 8 of the Sublease, shall include (if permitted by the insurer) a waiver of subrogation in favor of Sublandlord as provided in Section 8 of the Sublease, and shall insure Sublandlord and Master Landlord and Subtenant, as their respective interests may appear.

 

H.                                     Indemnification .  EXCEPT TO THE EXTENT SUCH COSTS, LOSSES, LIABILITIES OR ACTIONS RESULT FROM SUBLANDLORD’S NEGLIGENCE AND/OR WILLFUL MISCONDUCT, SUBTENANT SHALL INDEMNIFY AND HOLD SUBLANDLORD HARMLESS FROM AND AGAINST ALL COSTS (INCLUDING REASONABLE ATTORNEY’S FEES AND COSTS OF SUIT), LOSSES, LIABILITIES OR CAUSES OF ACTION ARISING OUT OF OR RELATING TO SUBTENANT’S CONSTRUCTION OF THE FIFTH FLOOR IMPROVEMENTS, INCLUDING, BUT NOT LIMITED TO, ANY MECHANIC’S OR MATERIALMEN’S LIENS ASSERTED IN CONNECTION THEREWITH.

 

I.                                          Project Timing .  Subtenant shall use reasonable efforts to substantially complete the Fifth Floor Improvements no later than April 1, 2006.  Each party shall timely perform its obligations as set forth herein, subject to any Sublandlord Delays, delays by Master Landlord, or arising from Force Majeure. When used herein, “Force Majeure” shall mean any prevention, delay or stoppage due to governmental regulation, strikes, lockouts, acts of God, acts of war, terrorists acts, civil commotions, unusual scarcity of or inability to obtain labor or materials, labor difficulties, casualty or other causes reasonably beyond such party’s control or attributable to the other party’s action or inaction.

 

J.                                         Cooperation .  During the entire course of the construction process, Subtenant and Sublandlord each shall respond to requests for information or decisions with reasonable dispatch.  Without limiting the foregoing, each party shall cooperate with the other to facilitate and expedite the efficient design and construction of the Fifth Floor Improvements.

 

K.                                     Substantial Completion .  Within ten (10) days after Substantial Completion (as defined below) of the Fifth Floor Improvements, Sublandlord and Subtenant shall acknowledge in writing that the Fifth Floor Improvements were constructed in accordance with the “as built” plans provided by Subtenant (or indicate any known discrepancies).  “Substantial Completion” means that construction has been sufficiently completed such that the Fifth Floor Premises can be occupied and used to conduct Subtenant’s business without interference.

 

L.                                       Sublandlord Delays .  As used herein, “Sublandlord Delays” shall mean any failure by Sublandlord to act, where it had a duty to do so), and delays caused by Sublandlord’s negligence

 

3



 

or willful misconduct, which shall cause or contribute to (but only to the extent of such contribution) a delay in the Substantial Completion of the Fifth Floor Improvements.

 

3.                                        ALLOWANCES .

 

A.                                    Allocation of Costs .  In connection with the construction of the Fifth Floor Improvements, Sublandlord shall provide Subtenant with an allowance to pay some or all Costs of Construction (as defined below) up to $3,518,340 Dollars (the “Fifth Floor Improvement Allowance”).  Prior to commencing construction of the Fifth Floor Improvements, Subtenant shall submit copies of final construction budgets, and contracts showing the Costs of Construction.  Subtenant shall bear all Costs of Construction in excess of the Fifth Floor Improvement Allowance (the “Subtenant’s Excess Cost”).  Based on the documentation submitted by Subtenant prior to the commencement of construction, in the event such documentation indicates that the Costs of Construction will exceed the amount of the Fifth Floor Improvement Allowance, Subtenant and Sublandlord shall share the Costs of Construction, up to full disbursement of the Fifth Floor Improvement Allowance, on a pari passu basis and, after full disbursement of the Fifth Floor Improvement Allowance, Subtenant shall be solely responsible for the remaining Costs of Construction, on a monthly basis as such excess costs are incurred over the course of construction of the Fifth Floor Improvements.  Subtenant shall bear all costs of, and be solely responsible for, installation of its telephone system, computer cabling, trade fixtures, furniture, furnishings, and personal property to the extent not specifically provided in the Plans.

 

As used in this Lease, the phrase “Costs of Construction” means all costs and expenses incurred in connection with design and construction of the Fifth Floor Improvements, including, without limitation, space planning, architectural and engineering fees and expenses for preparation of the Construction Documents, Revised Construction Documents and the Final Construction Documents and any approved changes thereto; permit and inspection fees; amounts paid to contractors, subcontractors and material suppliers; premiums for insurance and bonds, costs of utilities, equipment rental, labor, materials and supplies, and sales taxes thereon; and any third-party construction and/or project management fees.

 

All of the Fifth Floor Improvements paid for by Sublandlord may be depreciated by Sublandlord.

 

B.                                      Payment of Allowances . The Fifth Floor Improvement Allowance shall be allocated and applied as follows:

 

(i)                                      Sublandlord shall make disbursements from the Fifth Floor Improvement Allowance for payment for space planning, architectural, engineering and project/construction management fees and costs incurred in connection with the preparation of the Construction Documents, Revised Construction Documents and the Final Construction Documents and project/construction management, based upon the percentage of completion of such construction documents or services furnished, as the case may be, and subject to Sublandlord’s receipt of lien releases and waivers for payments made, updated change order summaries, and updated project schedules (collectively, “Draw Documentation”), such payment to be made within thirty (30) days

 

4



 

following receipt of a draw request for disbursement and applicable Draw Documentation from Subtenant and Subtenant’s architect, engineers, and project/construction manager, as the case may be.

 

(ii)                                   Sublandlord shall make disbursements from the Fifth Floor Improvement Allowance for the payment of Costs of Construction.  Within thirty (30) days after the date on which Subtenant’s General Contractor submits a periodic draw request for payment of Costs of Construction (each a “Construction Payment”), as certified by Subtenant’s architect, Sublandlord shall be obligated to reimburse Subtenant for Sublandlord’s share of each such Contractor Payment (to the extent certified by Subtenant’s architect) paid by Subtenant to Subtenant’s General Contractor until the balance of the Fifth Floor Improvement Allowance has been fully utilized.  For purposes hereof, Sublandlord’s share shall be equal to the amount of the applicable Construction Payment less retainage in the amount provided under the construction contract between Subtenant and Subtenant’s General Contractor, but in no event less than five percent (5%) of the applicable Construction Payment, (a “Sublandlord Payment”), which Sublandlord Payment shall be made by Sublandlord from the Fifth Floor Improvement Allowance and shall not exceed in the aggregate the then unadvanced portion of the Fifth Floor Improvement Allowance.  Sublandlord shall hold all retainage amounts until Substantial Completion and thereafter release to Subtenant said retainage less amounts, if any, for incomplete work or unsettled claims.  All payments of the Fifth Floor Improvement Allowance, including the release of any retainage amounts, shall be made to Subtenant within thirty (30) days after Sublandlord’s receipt of an invoice from Subtenant requesting funding of such costs and expenses, which invoice shall include the architects’ certification and documentation reasonably acceptable to Sublandlord and Sublandlord’s construction lender (if any) to confirm payment of such costs and expenses, together with a copy of the draw request and all supporting information and partial lien waivers and releases from Subtenant, Subtenant’s General Contractor and subcontractors with contracts in excess of $10,000.00.

 

C.                                      Unused Allowances .  In the event Subtenant does not utilize all of the Fifth Floor Improvement Allowance by June 30, 2006 (as evidenced by Subtenant’s submission of  a completed draw request for the unused portion of the Fifth Floor Allowance), which date shall be extended by Force Majeure, the unused portion of the Fifth Floor Improvement Allowance shall remain in the possession of Sublandlord and shall not be credited against Subtenant’s payments of Fixed Rent and other charges first becoming due under this Sublease.  Notwithstanding the foregoing,  amounts which have been retained by Sublandlord for incomplete work (including, without limitation, punch-list) and unsettled claims shall be released by Sublandlord upon completion of such work or settlement of such claims, as the case may be.

 

D.                                     Ingress and Egress .  All persons and entities performing work in or supplying materials to the Fifth Floor Premises on behalf of Subtenant shall use only those service corridors and service entrances designated by Sublandlord for ingress and egress of personnel, and the delivery and removal of equipment and material through or across any common areas of the Building shall only be permitted with the written approval of Sublandlord, not to be unreasonably withheld, and during hours reasonably determined by Sublandlord.  Sublandlord shall have the right to order Subtenant or any person or entity who violates the above requirements to cease work and to remove itself, its equipment and its employees from the Fifth Floor Premises.

 

5



 

E.                                       Rules and Regulations .  Subtenant, its agents, employees and contractors shall abide by the rules of the Building applicable to all contractors and others in or upon the Building or the Fifth Floor Premises and shall coordinate and schedule their access to the Fifth Floor Premises for labor and materials delivery through Sublandlord’s contractor, or if so directed by Sublandlord, the managing agent for the Building.

 

F.                                       Lease Terms Applicable .  All work to be performed pursuant to this Exhibit E shall be subject to the terms and provisions of the Sublease and Master Lease.

 

G.                                      No Additional Agreement .  Except as expressly set forth herein, Sublandlord has no other agreement with Subtenant and has no other obligation to do any other work or pay any amounts with respect to the Fifth Floor Premises.  Any other work in the Fifth Floor Premises which may be permitted by Sublandlord pursuant to the terms and conditions of the Sublease shall be done at Subtenant’s sole cost and expense and in accordance with the terms and conditions of the Sublease.

 

H.                                     Applicability .  This Exhibit E shall not be deemed applicable to any additional space added to the original Fifth Floor Premises at any time or from time to time, whether by any options under the Sublease or otherwise, or to any portion of the original Fifth Floor Premises or any additions thereto in the event of a renewal or extension of the initial term of the Sublease, whether by any options under the Sublease or otherwise, unless expressly so provided in the Sublease or any amendment or supplement thereto.

 

4.                                        MISCELLANEOUS .

 

A.                                    Representatives .  Sublandlord hereby appoints Alfred Vaz, Jr. of Sublandlord (“Sublandlord’s Representative”) to act as the Sublandlord’s Representative in all matters covered by this Workletter.  Subtenant hereby appoints Richard P. Shea of Subtenant (“Subtenant’s Representative”) to act as Subtenant’s Representative in all matters covered by this Workletter.  All inquiries, requests, instructions, authorizations and other communications with respect to the matters covered by this Workletter will be made to Sublandlord’s Representative or Subtenant’s Representative, as the case may be.  Either party may change its representative under this Workletter at any time by giving ten (10) days written notice to the other party delivered in accordance with the notice provisions of this Lease.

 

B.                                      Intentionally Omitted .

 

C.                                      Incorporation .                     The exculpatory provisions set forth in the Sublease and Sublease as well as all other terms and provisions of the Sublease and Sublease, insofar as they are applicable to this Exhibit E are hereby incorporated herein by this reference.

 

D.                                     Cooperation .    Subtenant and Sublandlord shall cooperate with the other’s architect, engineer or space planner as promptly as possible and in any event in sufficient time to cause the Working Plans to be prepared and timely delivered as hereinabove required.

 

6



 

E.                                       No Representations.   Neither review nor approval by Sublandlord of any of the Working Plans shall constitute a representation or warranty by Sublandlord that such Working Plans either (i) are complete or suitable for their intended purpose or (ii) comply with applicable laws, ordinances, codes and regulations, it being expressly agreed by Subtenant that Sublandlord assumes no responsibility or liability whatsoever to Subtenant or to any other person or entity for such completeness, suitability or compliance. Subtenant shall be solely responsible to determine at the site all dimensions of the Fifth Floor Premises and the Building which affect any work that may be performed by Subtenant or any of Subtenant’s contractors hereunder.

 

F.                                       Interpretation .  The headings used in this Work Letter are for convenience and reference use only, and are not to be considered in the construction or interpretation of this Work Letter.  The parties agree that each party and its legal counsel has reviewed or has had the opportunity to review this Work Letter and that any rule of construction to the effect that ambiguities are to be resolved against the drafting party shall not apply in any construction or interpretation of this Work Letter.  All defined terms herein shall be so defined for the purposes of this Exhibit E.

 

7



 

EXHIBIT F

 

REPLACEMENT TO EXHIBIT C-1

 

Graphic Omitted

 

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EXHIBIT G

 

REPLACEMENT TO EXHIBIT C-2

 

Graphic Omitted

 

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Exhibit 10.48

 

THIRD AMENDMENT TO SUBLEASE

 

THIS THIRD AMENDMENT TO SUBLEASE (“Third Amendment”) is entered into as of this 27th day of January, 2006 by and between Vertex Pharmaceuticals Incorporated (“Sublandlord”) and Momenta Pharmaceuticals, Inc. (“Subtenant”).

 

R E C I T A L S

 

A. Sublandlord and Subtenant entered into a sublease, dated as of September 14, 2004 in which Sublandlord subleased to Subtenant that certain real property on the fourth floor and the first floor (“Sublease Premises”) of the building located at 675 West Kendall Street, Cambridge, Massachusetts (“Building”), which sublease Sublandlord and Subtenant amended by a First Amendment to Sublease (“First Amendment”) dated September 7, 2005 and by a Second Amendment dated November 16, 2005   (as amended, “Sublease”); and

 

B. The Sublease provided in Section 1(b) for the use of approximately 20,000 rentable square feet located on the third floor of the Building and defined in the Sublease as the “Temporary Premises” from the Commencement Date until March 31 2006 at which time Subtenant was to vacate the Temporary Premises in accordance with the terms of the Sublease; and

 

C. Sublandlord and Subtenant desire to modify the Temporary Premises Expiration Date to provide for a phased expiration date on the terms and conditions set forth herein, as well as revising and confirming other provisions of the Sublease as set forth herein.

 

NOW, THEREFORE , for good and valuable consideration, the receipt and sufficiency of which are hereby acknowledged, Sublandlord and Subtenant, for themselves and their respective successors and assigns, covenant and agree as follows:

 

1.                                        Extension of Temporary Premises Demise. The phased vacancy plan denotes the areas of the Temporary Premises, which the Subtenant will vacate on the dates set forth herein and is attached as Exhibit B to this Third Amendment (“Phased Vacancy Plan”). The date on which Subtenant is obligated to vacate the Temporary Premises pursuant to Section 1(b) of the Sublease is changed from March 31, 2006 to:  (a) with respect to the area shown as “A” on the Phased Vacancy Plan, December 31, 2005;  (b) with respect to the area shown as “B” on the Phased Vacancy Plan, January 31, 2006;  (c) with respect to the area shown as “C” on the Phased Vacancy Plan, February 15, 2006;  and (d) with respect to the area shown as “D” on the Phased Vacancy Plan, June 30, 2006 (with respect to each specific area of the Temporary Premises, the “Temporary Premises Expiration Date”).

 

2.                                        Temporary Premises Doors. Sublandlord shall construct the entrance doors as shown on the Phased Vacancy Plan, upon the written request of Subtenant and at the sole cost of Subtenant.

 

3.                                        Subtenant’s Share. “Subtenant’s Share” as defined in the Defined Terms of the Sublease is amended to read as follows:

 



 

The ratio, expressed as a percentage, of the Rentable Square Footage of the premises leased by Subtenant to the Rentable Square Footage of the Master Premises, equal to (i) 6.88% from the Commencement Date until the day prior to the Sublease Premises Rent Commencement Date, (ii) 25.22% from the Sublease Premises Rent Commencement Date through June 30, 2006, and (iii) 26.99% thereafter.

 

4.                                        Definitions . Unless otherwise set forth in this Third Amendment, all capitalized terms shall have the same meaning as set forth in the Sublease.

 

5.                                        Effective Date . This Third Amendment shall take effect as of the date on which Landlord consents in writing to this Third Amendment (“ Effective Date ”).

 

6.                                        Ratification . The Sublease, as amended hereby, is hereby ratified, confirmed and deemed in full force and effect in accordance with its terms. Each party represents to the other that such party (a) is currently unaware of any default by the other party under the Sublease; and (b) has full power and authority to execute and deliver this Third Amendment and this Third Amendment represents a valid and binding obligation of such party enforceable in accordance with its terms.

 

7.                                        Multiple Counterparts . This Third Amendment may be executed in multiple counterparts, each of which when so executed and delivered shall be deemed to be originals and together shall constitute but one and the same instrument.

 

8.                                        No Offer. Submission of this instrument for examination and signature by Subtenant does not constitute an offer to lease or a reservation of or option for lease, and this instrument is not effective as a sublease amendment or otherwise until executed and delivered by both Sublandlord and Subtenant and consented to by Master Landlord.

 

9.                                        Master Landlord Consent . BMR-675 West Kendall Street LLC, a Delaware limited liability company, as a successor to Kendall Square, LLC is the Master Landlord as defined in the Sublease under the Master Lease, also defined in the Sublease. Following the parties’ execution of this Third Amendment, Sublandlord shall promptly submit this Third Amendment to the Master Landlord for its consent. The effectiveness of this Third Amendment is conditioned on the consent to this Third Amendment by Master Landlord as indicated by its execution of this Third Amendment in the space provided below (or the execution of another consent form reasonably satisfactory to Sublandlord and Subtenant) on or before January 31, 2006.

 

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IN WITNESS WHEREOF, the parties hereto have executed this instrument under seal as of the day and year first above written.

 

 

SUBLANDLORD :

 

 

 

VERTEX PHARMACEUTICALS
INCORPORATED

 

 

 

 

 

By:

/s/ Kenneth S. Boger

 

Name:

Kenneth S. Boger

 

Title:

Senior VP & General Counsel

 

 

 

 

 

 

 

SUBTENANT :

 

 

 

MOMENTA PHARMACEUTICALS, INC.

 

 

 

 

 

 

 

By:

 /s/ Richard P. Shea

 

 

Richard P. Shea, its Vice President, Treasurer and Chief Financial Officer

 

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EXHIBIT A

MASTER LANDLORD CONSENT

 

The undersigned, BMR-675 West Kendall Street LLC, hereby consents to this Third Amendment, subject to the terms and conditions of that certain Consent to Sublease dated as of September 23, 2004, by and between KS Parcel A, LLC (as predecessor-in-interest to Master Landlord), Sublandlord and Subtenant.

 

 

MASTER LANDLORD

 

BMR-675 WEST KENDALL STREET LLC

 

 

 

 

 

By:

/s/ Gary A. Kreitzer

 

Name:

Gary A. Kreitzer

 

Title:

Executive VP.

 



 

EXHIBIT B

 

PHASED VACANCY PLAN FOR TEMPORARY PREMISES

 

FOLLOWING THIS PAGE

 


 

Exhibit 21

 

SUBSIDIARIES OF MOMENTA PHARMACEUTICALS, INC.

 

Name of Subsidiary

 

Jurisdiction of Organization

 

 

 

Momenta Pharmaceuticals Securities Corporation

 

Massachusetts

 


EXHIBIT 23.1

 

Consent of Independent Registered Public Accounting Firm

 

We consent to the incorporation by reference in the Registration Statements (Form S-3 Nos. 333-126798 and 333-126356 and Form S-8 No. 333-117173) of Momenta Pharmaceuticals, Inc. and in the related Prospectuses of our reports dated March 13, 2006, with respect to the consolidated financial statements of Momenta Pharmaceuticals, Inc., Momenta Pharmaceuticals, Inc. management’s assessment of the effectiveness of internal control over financial reporting, and the effectiveness of internal control over financial reporting of Momenta Pharmaceuticals, Inc., included in this Annual Report (Form 10-K) for the year ended December 31, 2005.

 

 

/s/ Ernst & Young LLP

 

 

 

Boston, Massachusetts

 

March 13, 2006

 

 

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EXHIBIT 31.1

 

CERTIFICATION

 

I, Alan L. Crane, Chief Executive Officer of Momenta Pharmaceuticals, Inc., certify that:

 

1.                                        I have reviewed this Annual Report on Form 10-K of Momenta Pharmaceuticals, Inc.

 

2.                                        Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state a material fact necessary to make the statements made, in light of the circumstances under which such statements were made, not misleading with respect to the period covered by this report.

 

3.                                        Based on my knowledge, the financial statements, and other financial information included in this report, fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as of, and for, the periods presented in this report.

 

4.                                        The registrant’s other certifying officer and I are responsible for establishing and maintaining disclosure controls and procedures (as defined in Exchange Act Rules 13a-15(e) and 15d-15(e)) and internal control over financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have:

 

a)                                       Designed such disclosure controls and procedures, or caused such disclosure controls and procedures to be designed under our supervision, to ensure that material information relating to the registrant, including its consolidated subsidiaries, is made known to us by others within those entities, particularly during the period in which this report is being prepared; and

 

b)                                      Designed such internal control over financial reporting, or caused such internal control over financial reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial reporting and the preparation of the financial statements for external purposes in accordance with generally accepted accounting principles; and

 

c)                                       Evaluated the effectiveness of the registrant’s disclosure controls and procedures and presented in this report our conclusions about the effectiveness of the disclosure controls and procedures, as of the end of the period covered by this report based on such evaluation; and

 

d)                                      Disclosed in this report any change in the registrant’s internal control over financial reporting that occurred during the registrant’s most recent fiscal quarter (the registrant’s fourth fiscal quarter in the case of an annual report) that has materially affected, or is reasonably likely to materially affect, the registrant’s internal control over financial reporting.

 

5.                                        The registrant’s other certifying officer and I have disclosed, based on our most recent evaluation of internal control over financial reporting, to the registrant’s auditors and the audit committee of the registrant’s board of directors (or persons performing the equivalent functions):

 

a)                                       All significant deficiencies and material weaknesses in the design or operation of internal control over financial reporting which are reasonably likely to adversely affect the registrant’s ability to record, process, summarize and report financial information; and

 

b)                                      Any fraud, whether or not material, that involves management or other employees who have a significant role in the registrant’s internal control over financial reporting.

 

 

Date: March 16, 2006

/s/  ALAN L. CRANE

 

 

 

 

 

 Alan L. Crane
Chief Executive Officer

 

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EXHIBIT 31.2

 

CERTIFICATION

 

I, Richard P. Shea, Chief Financial Officer of Momenta Pharmaceuticals, Inc., certify that:

 

1.                                        I have reviewed this Annual Report on Form 10-K of Momenta Pharmaceuticals, Inc.

 

2.                                        Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state a material fact necessary to make the statements made, in light of the circumstances under which such statements were made, not misleading with respect to the period covered by this report.

 

3.                                        Based on my knowledge, the financial statements, and other financial information included in this report, fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as of, and for, the periods presented in this report.

 

4.                                        The registrant’s other certifying officer and I are responsible for establishing and maintaining disclosure controls and procedures (as defined in Exchange Act Rules 13a-15(e) and 15d-15(e)) and internal control over financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have:

 

a)                                       Designed such disclosure controls and procedures, or caused such disclosure controls and procedures to be designed under our supervision, to ensure that material information relating to the registrant, including its consolidated subsidiaries, is made known to us by others within those entities, particularly during the period in which this report is being prepared; and

 

b)                                      Designed such internal control over financial reporting, or caused such internal control over financial reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial reporting and the preparation of the financial statements for external purposes in accordance with generally accepted accounting principles; and

 

c)                                       Evaluated the effectiveness of the registrant’s disclosure controls and procedures and presented in this report our conclusions about the effectiveness of the disclosure controls and procedures, as of the end of the period covered by this report based on such evaluation; and

 

d)                                      Disclosed in this report any change in the registrant’s internal control over financial reporting that occurred during the registrant’s most recent fiscal quarter (the registrant’s fourth fiscal quarter in the case of an annual report) that has materially affected, or is reasonably likely to materially affect, the registrant’s internal control over financial reporting.

 

5.                                        The registrant’s other certifying officer and I have disclosed, based on our most recent evaluation of internal control over financial reporting, to the registrant’s auditors and the audit committee of the registrant’s board of directors (or persons performing the equivalent functions):

 

a)                                       All significant deficiencies and material weaknesses in the design or operation of internal control over financial reporting which are reasonably likely to adversely affect the registrant’s ability to record, process, summarize and report financial information; and

 

b)                                      Any fraud, whether or not material, that involves management or other employees who have a significant role in the registrant’s internal control over financial reporting.

 

 

Date: March 16, 2006

/s/  RICHARD P. SHEA

 

 

 

 Richard P. Shea
Chief Financial Officer

 

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Exhibit 32.1

 

STATEMENT PURSUANT TO 18 U.S.C. SECTION 1350

 

Pursuant to 18 U.S.C. Section 1350, the undersigned certifies that this Annual Report on Form 10-K for the period ended December 31, 2005 fully complies with the requirements of Section 13(a) or 15(d) of the Securities Exchange Act of 1934 and that the information contained in this report fairly presents, in all material respects, the financial condition and results of operations of Momenta Pharmaceuticals, Inc.

 

 

Dated: March 16, 2006

/s/  ALAN L. CRANE

 

 

 

 

 

 Alan L. Crane
Chief Executive Officer
(Principal executive officer)

 

A signed original of this written statement required by Section 906 has been provided to Momenta Pharmaceuticals, Inc. and will be retained by Momenta Pharmaceuticals, Inc. and furnished to the Securities and Exchange Commission or its staff upon request.

 

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Exhibit 32.2

 

STATEMENT PURSUANT TO 18 U.S.C. SECTION 1350

 

Pursuant to 18 U.S.C. Section 1350, the undersigned certifies that this Annual Report on Form 10-K for the period ended December 31, 2005 fully complies with the requirements of Section 13(a) or 15(d) of the Securities Exchange Act of 1934 and that the information contained in this report fairly presents, in all material respects, the financial condition and results of operations of Momenta Pharmaceuticals, Inc.

 

 

Dated: March 16, 2006

/s/  RICHARD P. SHEA

 

 

 

 

 

 Richard P. Shea
Chief Financial Officer
(Principal financial officer)

 

A signed original of this written statement required by Section 906 has been provided to Momenta Pharmaceuticals, Inc. and will be retained by Momenta Pharmaceuticals, Inc. and furnished to the Securities and Exchange Commission or its staff upon request.

 

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